View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21260_high_25 (Length: 227)
Name: NF21260_high_25
Description: NF21260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21260_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45165658 - 45165438
Alignment:
| Q |
1 |
gcataatcataatttaaaaactaataatatagaccatgtgatatgtactcgggtgccacatatcctaaagttcccgacatcttcatgttcttgtgttgca |
100 |
Q |
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|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45165658 |
gcataatcataattgaaaaactaataatatataccatgtgatatgtactcgggtgccacatatcctaaagttcccgacatcttcatgttcttgtgttgca |
45165559 |
T |
|
| Q |
101 |
cgccagatgctacagcaagtccaaaatctgatagctgaatcacaaaattcagtataaatgtaaatataggttttactattagttgacaacatgtaagcat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45165558 |
cgccagatgctacagcaagtccaaaatctgatagctgaatcacaaaattcagtataaatgtaaatataggttttactattagttgacaacatgtaagcat |
45165459 |
T |
|
| Q |
201 |
aatatgtcaaagtataatcta |
221 |
Q |
| |
|
||||||||||||||||||||| |
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|
| T |
45165458 |
aatatgtcaaagtataatcta |
45165438 |
T |
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