View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21260_low_16 (Length: 270)
Name: NF21260_low_16
Description: NF21260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21260_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 90 - 257
Target Start/End: Original strand, 1698426 - 1698593
Alignment:
| Q |
90 |
ggattaataggatcttctgaattcaaagcaaaagtcctctctttcttttgtacttatggatttcatatgttcttgtgattgcatctagtaagaatatgct |
189 |
Q |
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| T |
1698426 |
ggattaataggatcttctgaattcaaagcaaaagtcctctctttcttttgtatttatggatctcatatgttcttgtgattgcatctagtaagaatatgct |
1698525 |
T |
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| Q |
190 |
ttgtttgtgtgtataaaggttatttgaaatgcttgtaacaaaggtaataacttagttgtaattcatct |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1698526 |
ttgtttgtgtgtataaaggttatttgaaatgcttgtaacaaaggtaataacttagttgtaattcatct |
1698593 |
T |
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