View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21261_low_3 (Length: 433)

Name: NF21261_low_3
Description: NF21261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21261_low_3
NF21261_low_3
[»] chr7 (40 HSPs)
chr7 (164-419)||(29293145-29293400)
chr7 (162-340)||(29292920-29293098)
chr7 (162-343)||(17156965-17157146)
chr7 (162-343)||(3204968-3205149)
chr7 (167-343)||(18863970-18864146)
chr7 (164-340)||(37888833-37889011)
chr7 (163-340)||(37889136-37889314)
chr7 (162-328)||(37972286-37972452)
chr7 (163-336)||(10533033-10533206)
chr7 (162-340)||(20419201-20419380)
chr7 (164-340)||(13741557-13741732)
chr7 (163-341)||(9034866-9035045)
chr7 (162-330)||(13744121-13744288)
chr7 (164-340)||(48359320-48359494)
chr7 (164-340)||(9035169-9035347)
chr7 (164-340)||(3204669-3204843)
chr7 (162-340)||(38826789-38826969)
chr7 (162-340)||(22740154-22740325)
chr7 (162-340)||(42418589-42418768)
chr7 (167-343)||(22740467-22740641)
chr7 (167-340)||(20418891-20419057)
chr7 (163-340)||(18864288-18864456)
chr7 (163-340)||(37971959-37972128)
chr7 (167-340)||(42418913-42419079)
chr7 (162-340)||(36527382-36527559)
chr7 (164-340)||(36527686-36527852)
chr7 (183-284)||(48359592-48359693)
chr7 (162-270)||(44600083-44600191)
chr7 (163-270)||(13863312-13863419)
chr7 (164-270)||(44599489-44599595)
chr7 (162-270)||(13863905-13864012)
chr7 (17-86)||(32556349-32556417)
chr7 (163-270)||(8643714-8643821)
chr7 (163-218)||(9412325-9412380)
chr7 (162-225)||(16198970-16199033)
chr7 (164-218)||(3687656-3687710)
chr7 (163-220)||(13772640-13772697)
chr7 (163-266)||(46816263-46816366)
chr7 (164-218)||(13772901-13772955)
chr7 (162-218)||(9412021-9412077)
[»] chr3 (45 HSPs)
chr3 (164-340)||(47666213-47666389)
chr3 (164-340)||(53688181-53688356)
chr3 (162-340)||(53687886-53688063)
chr3 (163-340)||(27238464-27238641)
chr3 (163-340)||(40848839-40849016)
chr3 (164-343)||(42672978-42673156)
chr3 (162-340)||(26007180-26007357)
chr3 (163-340)||(47665910-47666087)
chr3 (164-340)||(48160211-48160387)
chr3 (178-340)||(22429474-22429636)
chr3 (164-328)||(3353128-3353289)
chr3 (182-340)||(3353428-3353587)
chr3 (167-340)||(27238786-27238951)
chr3 (162-340)||(40848519-40848692)
chr3 (164-340)||(44007967-44008143)
chr3 (162-340)||(36180554-36180730)
chr3 (165-340)||(22429159-22429327)
chr3 (163-293)||(48159896-48160026)
chr3 (167-340)||(24485025-24485189)
chr3 (164-340)||(10348684-10348853)
chr3 (164-340)||(42673181-42673349)
chr3 (167-340)||(26007505-26007670)
chr3 (165-343)||(10348480-10348659)
chr3 (164-340)||(24485334-24485513)
chr3 (164-340)||(42456079-42456247)
chr3 (163-340)||(36180875-36181045)
chr3 (167-298)||(53766166-53766296)
chr3 (164-340)||(44008286-44008454)
chr3 (162-340)||(53766469-53766635)
chr3 (164-340)||(21896391-21896564)
chr3 (247-343)||(42455852-42455948)
chr3 (164-275)||(8314013-8314124)
chr3 (235-340)||(21895700-21895806)
chr3 (367-412)||(47666139-47666184)
chr3 (167-266)||(1928386-1928484)
chr3 (164-218)||(20969019-20969073)
chr3 (163-220)||(21895656-21895714)
chr3 (163-213)||(42455789-42455839)
chr3 (164-220)||(3644781-3644837)
chr3 (163-217)||(8315083-8315136)
chr3 (164-218)||(10293608-10293662)
chr3 (164-218)||(10293909-10293963)
chr3 (164-217)||(1927772-1927825)
chr3 (162-218)||(20968716-20968772)
chr3 (162-218)||(47871122-47871177)
[»] chr1 (69 HSPs)
chr1 (164-343)||(49318041-49318219)
chr1 (167-341)||(44911314-44911488)
chr1 (163-340)||(44911024-44911201)
chr1 (162-340)||(48104676-48104854)
chr1 (166-343)||(50526347-50526524)
chr1 (163-412)||(50949370-50949620)
chr1 (164-340)||(9347126-9347303)
chr1 (163-340)||(9347428-9347605)
chr1 (167-340)||(50429958-50430132)
chr1 (164-340)||(21687025-21687202)
chr1 (164-340)||(50615499-50615674)
chr1 (164-340)||(50623327-50623502)
chr1 (162-340)||(4692311-4692489)
chr1 (164-343)||(27172116-27172291)
chr1 (164-343)||(6703769-6703948)
chr1 (167-340)||(28634034-28634208)
chr1 (162-340)||(46824156-46824334)
chr1 (162-340)||(42611183-42611363)
chr1 (163-340)||(999401-999579)
chr1 (164-340)||(49318323-49318496)
chr1 (164-340)||(4692022-4692196)
chr1 (163-340)||(28633719-28633889)
chr1 (163-340)||(32162928-32163098)
chr1 (164-336)||(13918446-13918618)
chr1 (167-340)||(42611491-42611665)
chr1 (164-340)||(49317752-49317927)
chr1 (167-340)||(46823846-46824011)
chr1 (162-340)||(999110-999286)
chr1 (162-304)||(20480166-20480307)
chr1 (164-340)||(48105001-48105170)
chr1 (164-340)||(26814694-26814862)
chr1 (189-343)||(44223994-44224148)
chr1 (162-326)||(20371038-20371199)
chr1 (164-336)||(21687348-21687520)
chr1 (162-340)||(50429654-50429833)
chr1 (162-340)||(27172427-27172597)
chr1 (163-340)||(6703459-6703627)
chr1 (163-340)||(26815006-26815174)
chr1 (165-340)||(13918751-13918920)
chr1 (164-298)||(20371272-20371406)
chr1 (163-307)||(19008661-19008805)
chr1 (164-298)||(20480534-20480665)
chr1 (164-298)||(47498301-47498433)
chr1 (167-340)||(50949164-50949317)
chr1 (162-276)||(39691942-39692056)
chr1 (256-340)||(50615289-50615373)
chr1 (256-340)||(50623117-50623201)
chr1 (162-270)||(49284407-49284515)
chr1 (164-270)||(6002237-6002343)
chr1 (185-307)||(32162750-32162866)
chr1 (227-343)||(44223747-44223854)
chr1 (162-275)||(33085669-33085780)
chr1 (162-220)||(8108991-8109049)
chr1 (192-270)||(49285003-49285081)
chr1 (367-412)||(44911242-44911287)
chr1 (166-270)||(6002842-6002946)
chr1 (162-218)||(47955304-47955360)
chr1 (162-213)||(50615238-50615289)
chr1 (162-213)||(50623066-50623117)
chr1 (233-307)||(19007774-19007848)
chr1 (209-272)||(6712215-6712279)
chr1 (164-220)||(48190771-48190827)
chr1 (162-213)||(19007733-19007783)
chr1 (163-220)||(48191353-48191410)
chr1 (165-220)||(47498493-47498547)
chr1 (162-216)||(22149701-22149755)
chr1 (163-217)||(39690793-39690847)
chr1 (162-218)||(13589659-13589714)
chr1 (166-218)||(17518602-17518653)
[»] chr4 (50 HSPs)
chr4 (162-343)||(26207359-26207539)
chr4 (162-322)||(26207642-26207802)
chr4 (164-343)||(169314-169493)
chr4 (162-340)||(28196650-28196829)
chr4 (163-341)||(28196345-28196523)
chr4 (164-340)||(32703527-32703704)
chr4 (163-340)||(23539840-23540015)
chr4 (163-343)||(9023243-9023423)
chr4 (162-341)||(32703223-32703402)
chr4 (164-340)||(9380307-9380483)
chr4 (163-340)||(39744342-39744520)
chr4 (163-340)||(292781-292958)
chr4 (182-340)||(25162191-25162349)
chr4 (164-340)||(23540130-23540306)
chr4 (164-343)||(43292234-43292411)
chr4 (162-340)||(169011-169191)
chr4 (162-340)||(48405960-48406138)
chr4 (178-341)||(48406262-48406425)
chr4 (163-340)||(9380627-9380796)
chr4 (164-340)||(39086499-39086677)
chr4 (165-340)||(25161879-25162047)
chr4 (164-307)||(4239277-4239420)
chr4 (162-340)||(293102-293273)
chr4 (162-340)||(9023565-9023736)
chr4 (163-340)||(39744029-39744198)
chr4 (165-295)||(43292038-43292168)
chr4 (186-341)||(39912364-39912519)
chr4 (185-340)||(12758089-12758237)
chr4 (182-293)||(44468849-44468959)
chr4 (186-340)||(12757788-12757943)
chr4 (162-343)||(39912052-39912223)
chr4 (162-270)||(43051200-43051308)
chr4 (162-270)||(36095815-36095922)
chr4 (163-270)||(50678778-50678885)
chr4 (164-270)||(50679372-50679478)
chr4 (167-270)||(36096423-36096526)
chr4 (163-266)||(56505692-56505795)
chr4 (162-270)||(43050605-43050713)
chr4 (367-412)||(26207565-26207610)
chr4 (165-242)||(11529169-11529246)
chr4 (163-270)||(45830145-45830251)
chr4 (163-270)||(56506522-56506629)
chr4 (162-220)||(24775781-24775839)
chr4 (164-272)||(16555762-16555871)
chr4 (162-218)||(13198906-13198962)
chr4 (162-218)||(18077202-18077258)
chr4 (162-217)||(54508813-54508868)
chr4 (165-218)||(8181992-8182046)
chr4 (168-218)||(49178816-49178866)
chr4 (163-220)||(11241659-11241715)
[»] chr2 (44 HSPs)
chr2 (167-341)||(41790494-41790667)
chr2 (167-343)||(26692695-26692871)
chr2 (162-340)||(8851146-8851324)
chr2 (163-340)||(41790790-41790967)
chr2 (182-340)||(19141727-19141885)
chr2 (162-341)||(26692394-26692573)
chr2 (162-340)||(17851282-17851458)
chr2 (164-340)||(16910827-16911005)
chr2 (162-340)||(8851469-8851638)
chr2 (164-340)||(7664559-7664727)
chr2 (166-340)||(6325225-6325399)
chr2 (163-340)||(7979566-7979742)
chr2 (163-340)||(7664247-7664415)
chr2 (164-340)||(17850978-17851146)
chr2 (165-340)||(16911154-16911321)
chr2 (166-340)||(19141446-19141611)
chr2 (171-296)||(6324924-6325049)
chr2 (163-307)||(5379870-5380014)
chr2 (189-343)||(18749750-18749906)
chr2 (162-295)||(5793445-5793578)
chr2 (163-307)||(5378660-5378804)
chr2 (162-340)||(7979890-7980058)
chr2 (165-340)||(18750018-18750178)
chr2 (162-269)||(37720202-37720307)
chr2 (162-270)||(2638818-2638926)
chr2 (163-270)||(2639430-2639537)
chr2 (163-270)||(26841586-26841693)
chr2 (164-270)||(26842186-26842292)
chr2 (164-340)||(38490718-38490894)
chr2 (167-270)||(7591204-7591307)
chr2 (165-270)||(18296077-18296182)
chr2 (164-270)||(7591798-7591904)
chr2 (162-218)||(6171456-6171512)
chr2 (162-218)||(20347464-20347520)
chr2 (163-218)||(30190922-30190977)
chr2 (162-220)||(18296691-18296749)
chr2 (162-220)||(24832329-24832387)
chr2 (367-412)||(41790694-41790739)
chr2 (162-218)||(11883621-11883677)
chr2 (164-218)||(11883926-11883980)
chr2 (164-218)||(40469427-40469481)
chr2 (163-216)||(29230281-29230334)
chr2 (162-211)||(43495307-43495356)
chr2 (162-218)||(40469729-40469785)
[»] chr6 (23 HSPs)
chr6 (162-340)||(7654426-7654604)
chr6 (162-340)||(29074250-29074427)
chr6 (162-340)||(29079014-29079191)
chr6 (162-340)||(29106823-29107000)
chr6 (164-340)||(33974176-33974353)
chr6 (164-340)||(2354409-2354584)
chr6 (162-338)||(2354691-2354866)
chr6 (164-340)||(10087737-10087912)
chr6 (167-343)||(32733871-32734047)
chr6 (165-340)||(22754968-22755142)
chr6 (184-340)||(13176639-13176795)
chr6 (164-340)||(22684243-22684411)
chr6 (164-340)||(22754657-22754825)
chr6 (162-298)||(32733555-32733691)
chr6 (162-290)||(13176984-13177111)
chr6 (163-270)||(33829584-33829691)
chr6 (164-270)||(33828990-33829096)
chr6 (167-340)||(33973867-33974030)
chr6 (367-410)||(2354638-2354681)
chr6 (164-220)||(3403717-3403773)
chr6 (163-218)||(3403989-3404044)
chr6 (162-218)||(18241852-18241908)
chr6 (164-218)||(18242156-18242210)
[»] chr5 (47 HSPs)
chr5 (163-343)||(12498800-12498983)
chr5 (163-340)||(26571043-26571219)
chr5 (163-330)||(12498566-12498733)
chr5 (162-341)||(3888539-3888718)
chr5 (164-340)||(19514525-19514703)
chr5 (164-340)||(3888239-3888415)
chr5 (165-340)||(22729318-22729492)
chr5 (162-340)||(2817147-2817325)
chr5 (162-343)||(19514845-19515019)
chr5 (167-340)||(21207229-21207395)
chr5 (185-340)||(41072092-41072247)
chr5 (162-341)||(34147389-34147566)
chr5 (162-340)||(34147139-34147316)
chr5 (163-340)||(43464078-43464246)
chr5 (163-343)||(26570728-26570900)
chr5 (162-343)||(11316857-11317030)
chr5 (164-340)||(37780631-37780796)
chr5 (162-340)||(37610200-37610367)
chr5 (178-340)||(37610506-37610658)
chr5 (162-340)||(37780318-37780486)
chr5 (162-283)||(25940519-25940640)
chr5 (166-340)||(2817454-2817626)
chr5 (164-296)||(22729008-22729138)
chr5 (167-298)||(10098861-10098991)
chr5 (162-340)||(43463754-43463932)
chr5 (228-340)||(25940842-25940955)
chr5 (164-340)||(10098519-10098681)
chr5 (167-340)||(30401885-30402053)
chr5 (165-275)||(25940956-25941067)
chr5 (163-270)||(18816951-18817058)
chr5 (164-270)||(18817559-18817665)
chr5 (162-270)||(11350806-11350913)
chr5 (167-262)||(11316717-11316812)
chr5 (162-280)||(42919303-42919420)
chr5 (163-271)||(25115756-25115865)
chr5 (163-271)||(25174848-25174957)
chr5 (167-270)||(11351376-11351478)
chr5 (164-220)||(18433015-18433071)
chr5 (163-214)||(16466746-16466797)
chr5 (162-220)||(26020448-26020506)
chr5 (163-220)||(22429194-22429250)
chr5 (162-218)||(18433316-18433372)
chr5 (163-218)||(25116061-25116116)
chr5 (163-218)||(25175151-25175206)
chr5 (163-218)||(33324838-33324893)
chr5 (163-220)||(22428933-22428989)
chr5 (164-220)||(34577162-34577217)
[»] chr8 (49 HSPs)
chr8 (162-343)||(24473643-24473824)
chr8 (163-340)||(37396707-37396888)
chr8 (162-340)||(41662519-41662698)
chr8 (163-340)||(34498433-34498610)
chr8 (164-340)||(24473343-24473519)
chr8 (163-340)||(6198973-6199151)
chr8 (164-343)||(9623502-9623681)
chr8 (164-340)||(16169485-16169661)
chr8 (164-340)||(37397031-37397199)
chr8 (166-343)||(15444213-15444390)
chr8 (162-295)||(20861561-20861694)
chr8 (162-296)||(17431285-17431419)
chr8 (167-340)||(34498125-34498288)
chr8 (163-340)||(6198657-6198827)
chr8 (162-340)||(33726989-33727161)
chr8 (167-296)||(15444569-15444698)
chr8 (233-340)||(33726734-33726841)
chr8 (162-293)||(25439052-25439181)
chr8 (164-340)||(16169174-16169342)
chr8 (163-270)||(2856525-2856632)
chr8 (166-276)||(15442765-15442875)
chr8 (162-270)||(9823309-9823417)
chr8 (164-270)||(39723996-39724102)
chr8 (163-270)||(13026634-13026741)
chr8 (167-270)||(13027229-13027332)
chr8 (167-270)||(15042148-15042251)
chr8 (164-270)||(9822748-9822854)
chr8 (164-270)||(22851390-22851496)
chr8 (166-225)||(25438794-25438853)
chr8 (164-270)||(3307338-3307444)
chr8 (163-304)||(13937303-13937444)
chr8 (162-270)||(13936721-13936827)
chr8 (175-270)||(39723413-39723508)
chr8 (164-271)||(41662349-41662457)
chr8 (162-218)||(43246176-43246232)
chr8 (162-216)||(12281122-12281176)
chr8 (166-218)||(765736-765788)
chr8 (164-220)||(37752084-37752140)
chr8 (164-218)||(15156185-15156239)
chr8 (164-217)||(3463946-3463999)
chr8 (164-220)||(9623880-9623935)
chr8 (162-304)||(6092775-6092915)
chr8 (309-340)||(9623825-9623856)
chr8 (163-218)||(15155882-15155937)
chr8 (163-218)||(16928941-16928996)
chr8 (166-213)||(33726696-33726743)
chr8 (164-218)||(16929242-16929296)
chr8 (164-218)||(37752416-37752470)
chr8 (164-220)||(23123338-23123394)
[»] scaffold0017 (2 HSPs)
scaffold0017 (164-340)||(185152-185328)
scaffold0017 (165-296)||(184840-184971)
[»] scaffold0460 (2 HSPs)
scaffold0460 (162-340)||(328-506)
scaffold0460 (164-298)||(685-816)
[»] scaffold0041 (2 HSPs)
scaffold0041 (162-340)||(38573-38751)
scaffold0041 (197-340)||(38284-38427)
[»] scaffold0029 (2 HSPs)
scaffold0029 (162-340)||(9903-10082)
scaffold0029 (234-340)||(10226-10332)
[»] scaffold0069 (2 HSPs)
scaffold0069 (162-326)||(50073-50234)
scaffold0069 (164-298)||(50426-50560)
[»] scaffold0176 (2 HSPs)
scaffold0176 (163-340)||(19921-20098)
scaffold0176 (162-296)||(19619-19752)
[»] scaffold0328 (2 HSPs)
scaffold0328 (164-270)||(6743-6849)
scaffold0328 (164-270)||(6152-6258)
[»] scaffold0319 (1 HSPs)
scaffold0319 (162-218)||(6392-6448)
[»] scaffold0192 (1 HSPs)
scaffold0192 (162-218)||(25369-25425)
[»] scaffold0802 (1 HSPs)
scaffold0802 (164-218)||(1420-1474)
[»] scaffold0001 (2 HSPs)
scaffold0001 (164-218)||(438930-438984)
scaffold0001 (162-210)||(183670-183718)
[»] scaffold0110 (1 HSPs)
scaffold0110 (163-218)||(45807-45861)
[»] scaffold1221 (1 HSPs)
scaffold1221 (192-220)||(1538-1566)
[»] scaffold0535 (1 HSPs)
scaffold0535 (162-214)||(10010-10062)
[»] scaffold0009 (1 HSPs)
scaffold0009 (162-218)||(205685-205740)


Alignment Details
Target: chr7 (Bit Score: 172; Significance: 3e-92; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 164 - 419
Target Start/End: Complemental strand, 29293400 - 29293145
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293301  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttcannnnnnnnnnnnnnnnnnnn 363  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||                        
T  29293300 ctgattttatggttcccatgacatttactgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaatttcatttttttaaaaataaaaaaa 29293201  T
Q  364 tgatatttttcagattaattgataaaaataccatcattttcacgtgccttcatctc 419  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  29293200 tgatatttttcagattaattgataaaaataccatcattttcatgtgccttcttctc 29293145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 29292920 - 29293098
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccct 29293019  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  29293020 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattattgtgtgccacgtgtgtaatt 29293098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 162 - 343
Target Start/End: Original strand, 17156965 - 17157146
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  17156965 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccct 17157064  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  17157065 ttctgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 17157146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 162 - 343
Target Start/End: Complemental strand, 3205149 - 3204968
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| | |||| |||||||||||||||||||||||||||||||||||    
T  3205149 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccct 3205050  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  3205049 ttctgattttatggtccccatgacatttagtgttgatgtatctgttttttatcaattaatgtgtgccacgtgtgtaatttca 3204968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 167 - 343
Target Start/End: Original strand, 18863970 - 18864146
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  18864070 attttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 18864146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 37888833 - 37889011
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37888932  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||||||||||  || |||||||||||| ||||||||| |||||||||    
T  37888933 ctgattttatggtccccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgccacgtgtgtaatt 37889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 37889314 - 37889136
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctt 37889215  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| ||||||||| |||||||||    
T  37889214 tctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaacgtgtgccacgtgtgtaatt 37889136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 162 - 328
Target Start/End: Complemental strand, 37972452 - 37972286
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  37972452 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 37972353  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgcc 328  Q
    ||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  37972352 ttcagattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgcc 37972286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 163 - 336
Target Start/End: Original strand, 10533033 - 10533206
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 10533132  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgt 336  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||| |||||    
T  10533133 tctgattttatggtccccatgacatttagtgctgatgtgtttgttttttattaattaatttgtgccacgtgtgt 10533206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 20419380 - 20419201
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  20419380 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 20419281  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  20419280 ttctgattttatggtccccgtgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 20419201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 13741557 - 13741732
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccacttt 13741656  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||| |||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  13741657 ctga-tttatggtccccgtgacatttagtgctgatctgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 13741732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 163 - 341
Target Start/End: Original strand, 9034866 - 9035045
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  9034866 aggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccct 9034965  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  9034966 ttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttattaattaatgtgtgccacgtgtgtaattt 9035045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 162 - 330
Target Start/End: Complemental strand, 13744288 - 13744121
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  13744288 aaggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 13744190  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccac 330  Q
    || |||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  13744189 ttttgattttatggtccccatgatatttagtgctgatgtgtctgttttttatcaattaatgtgtgccac 13744121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 48359320 - 48359494
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttt-cccccttt 48359417  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  48359418 ctgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 48359494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 9035347 - 9035169
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc-cccctt 262  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccctt 9035248  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |  ||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  9035247 tctgattttatggtccagatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 9035169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 3204669 - 3204843
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||    
T  3204669 ggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctcttt 3204766  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  3204767 ctgattttatggtccccatgacatttattgctgatgtgtctattttttatcaattaatgtgtgccacgtgtgtaatt 3204843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 38826969 - 38826789
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||| |||||| || |||||||||||||||||||||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccct 38826870  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgtt--atttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||   |||||||||||||||||| ||| |||||||||    
T  38826869 ttctgattttatgatccccatgacatttagtgctgatgtgtctgtttcttttatcaattaatgtgtgtcacgtgtgtaatt 38826789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 22740154 - 22740325
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  22740154 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 22740253  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||| |       || ||||||||||||||||||||||||||||||||    
T  22740254 ttctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 22740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 42418589 - 42418768
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||||||| | || || |||| |||||||||||||||||||||||||||||||||||    
T  42418589 aaggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccct 42418688  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||| |||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  42418689 ttctaattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 42418768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 167 - 343
Target Start/End: Complemental strand, 22740641 - 22740467
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||| ||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccc-tttatg 22740544  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||    
T  22740543 attctatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgcgtgccacgtgtgtaatttca 22740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 20418891 - 20419057
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 20418990  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||||||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  20418991 attttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 20419057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 18864456 - 18864288
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||| | ||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||    
T  18864456 aggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctt 18864358  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||||        || |||||||||||||||||||||| |||||||||    
T  18864357 tctgattttatggtccccatgacatttagtgctga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 18864288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 37971959 - 37972128
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  37971959 aggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctt 37972058  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||| ||||        ||| |||||||||||||||||| ||| |||||||||    
T  37972059 tctgattttatggtccccatgacatttagcgctg--------gttttttatcaattaatgtgtgtcacgtgtgtaatt 37972128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 42419079 - 42418913
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    ||||||||| ||||||||| |||||||||||||||||| | ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  42419079 ttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttct 42418981  T
Q  266 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||| ||||||||||||||||||| |       || |||||||||||||||||||||| |||||||||    
T  42418980 gattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 42418913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 36527382 - 36527559
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| |||| |||| ||||||||| |||||||| ||||||||||||||| |||| |||||| | ||||| |||| ||||||||| |||||    
T  36527382 aaggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccct 36527480  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| || |||||||||||| ||| |||||||||| || |||||||||||||||||||||| |||||||||    
T  36527481 ttctgattttatagtccccatgacatttggtgatgatgtgtctattttttatcaattaatgtgtgccacgtgtgtaatt 36527559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 36527852 - 36527686
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||||||||||| | ||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  36527852 ggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 36527753  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||  ||||||||||||          ||||||| ||||||||||||| |||||||| |||||||||    
T  36527752 ctgattttatggtctccatgacattta----------gtctgttttttatcaattaatatgtgccacgtgtgtaatt 36527686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 48359693 - 48359592
Alignment:
Q  183 cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccat 282  Q
    |||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48359693 cccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccat 48359594  T
Q  283 ga 284  Q
    ||    
T  48359593 ga 48359592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 44600191 - 44600083
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  44600191 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 44600092  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  44600091 ttctgattt 44600083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 13863312 - 13863419
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||| |||    
T  13863312 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctt 13863411  T
Q  263 tctgattt 270  Q
    ||||||||    
T  13863412 tctgattt 13863419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 44599489 - 44599595
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 44599588  T
Q  264 ctgattt 270  Q
    |||||||    
T  44599589 ctgattt 44599595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 13864012 - 13863905
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| ||||| |||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  13864012 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttccccct 13863914  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  13863913 ttctgattt 13863905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 32556417 - 32556349
Alignment:
Q  17 aggaacattaaaaggtgtctgatttaacgttattgattactccacgggtagtataaagtcatttttctgg 86  Q
    |||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  32556417 aggaacattaaa-gatgtctgatttaacgttattgattactcccctggtagtataaagtcatttttctgg 32556349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 8643821 - 8643714
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||  ||||||  ||| ||||||||| |||||||||||||||  | | |||||||||||||||| ||| ||  |||||||||||    
T  8643821 aggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttccccctt 8643722  T
Q  263 tctgattt 270  Q
    ||||||||    
T  8643721 tctgattt 8643714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 9412380 - 9412325
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  9412380 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 16199033 - 16198970
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgttt 225  Q
    |||||||||||||| |||| |||  |||||||||||||||||| ||||||||||||||| ||||    
T  16199033 aaggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttt 16198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 3687710 - 3687656
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 3687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 13772640 - 13772697
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||||| |||||| ||||||  ||||| |||||||||||||||||||||||    
T  13772640 aggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccat 13772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 46816366 - 46816263
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||| ||| ||||  ||| |||||| || |||||||||||||||  ||| |||||||||||||||  ||| ||  |||| ||||||    
T  46816366 aggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgtaccccatcatttttcccctt 46816267  T
Q  263 tctg 266  Q
    ||||    
T  46816266 tctg 46816263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 13772955 - 13772901
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 9412021 - 9412077
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| ||||||||| |||  ||||  ||||||| |||||||||||||    
T  9412021 aaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 9412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 47666389 - 47666213
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 47666290  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  47666289 ctgattttatggttcccatgacatttagtgctgatgtgtgtgttatttatcaattaatgtgtgccacgtgtgtaatt 47666213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 53688356 - 53688181
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||| | |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  53688356 ggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttcccccttt 53688258  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  53688257 ctgattttatgattctcatgacatttagtgttgatatgtctgttatttatcaattaatgtgtgccacatgtgtaatt 53688181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 53687886 - 53688063
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  53687886 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccct 53687985  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||| ||||||||| |||||||||    
T  53687986 ttctgattttatggtccccatgacatttagcgttgatgtgtctgtt-tttatcaattaacgtgtgccacgtgtgtaatt 53688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 27238464 - 27238641
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||| | ||||||| |||||||||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  27238464 aggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctt 27238563  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||  |||||||||    
T  27238564 tctgattttatggtccccatgacttttagtgctgatatgtctgttttttatcaattaatgtgtgccatgtgtgtaatt 27238641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 40849016 - 40848839
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||    
T  40849016 aggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcaccctt 40848917  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||| |||||||||    
T  40848916 tctgattttatggtccccatgacatttagtgttgatatgcctgttttttatcaattaatgtgtgccacgtgtgtaatt 40848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 164 - 343
Target Start/End: Original strand, 42672978 - 42673156
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttcccccttt 42673076  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
     |||||||||||  ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||    
T  42673077 atgattttatggcccccatgacatttagtgctgatatgtccgttttttatcaattaatgtgtgccacgtgtgtaatttca 42673156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 26007180 - 26007357
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||  ||    
T  26007180 aaggcttaattgcatttt-cccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatct 26007278  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||||||    
T  26007279 ttctgattttatggtccccatgacatttagtgctgatatatctgttttttatcaattaatgtgtgccacgtgtgtaatt 26007357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 47665910 - 47666087
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||| |||| ||||||||| |||||||| ||||||||||| |||||||||||||||| |||||| || ||||||||||||||||||    
T  47665910 aggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttccccctt 47666009  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    | |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  47666010 tttgattttatggttctcatgacatttagtggtgatgtgtctattatttatcaattaatgtgtgccacgtgtgtaatt 47666087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 48160387 - 48160211
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 48160288  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||| | |||||||||||||||| | || | |||||| |||||||||||||||||||||| |||||||||    
T  48160287 ctgattttatgatccccatgacatttagtgttaatttttctgttttttatcaattaatgtgtgccacgtgtgtaatt 48160211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 22429636 - 22429474
Alignment:
Q  178 tttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggtt 277  Q
    |||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  22429636 tttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtc 22429537  T
Q  278 cccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  22429536 cccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 22429474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 164 - 328
Target Start/End: Original strand, 3353128 - 3353289
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttcccccttt 3353224  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgcc 328  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  3353225 ctgattttatggtccccatgacatttagtactgatgtgtctgttttttatcaattaatgtgtgcc 3353289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 182 - 340
Target Start/End: Complemental strand, 3353587 - 3353428
Alignment:
Q  182 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 281  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3353587 ccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtcccca 3353489  T
Q  282 tgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||| |||||||||    
T  3353488 tgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgccacgtgtgtaatt 3353428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 27238951 - 27238786
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccctttctg 27238852  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  27238851 attttatggttcccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 27238786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 40848519 - 40848692
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  40848519 aaggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccct 40848617  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||| ||||    || | || |||||||||||||||||||||| |||||||||    
T  40848618 ttctgattttatggtccccatgacatttagcgctg----gttttttttttatcaattaatgtgtgccacgtgtgtaatt 40848692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 44007967 - 44008143
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||| |||||||||||  ||||||||  | |||||| |  || |||| ||||||||||||||||||||||||||||| |||||||    
T  44007967 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttccccttt 44008066  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  44008067 ctgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 44008143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 36180554 - 36180730
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||||  |||||||  ||||||||| |||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||    
T  36180554 aaggcttaattgcacatttcccc--tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccct 36180651  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||||| ||| |||||||||    
T  36180652 ttctgattttatggtccccatgacatttagtgttgatatgtctgttttttatcaattaacgtgtgtcacgtgtgtaatt 36180730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 165 - 340
Target Start/End: Original strand, 22429159 - 22429327
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||||| |||||||| ||||||||||||| || ||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| |||||||||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  22429259 tgattttatggtccccatgacatttagtgctgat-------ttttttatcaattaatgtgtgccacatgtgtaatt 22429327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 48159896 - 48160026
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 48159995  T
Q  263 tctgattttatggttcccatgacatttagtg 293  Q
    |||||||||||| | ||| ||||||||||||    
T  48159996 tctgattttatgatccccgtgacatttagtg 48160026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 24485025 - 24485189
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||    
T  24485025 ttaattacatttttcctcc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctg 24485123  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||||||||||||||||        || |||||||||||||||||||||| |||||||||    
T  24485124 attttatggtccccatgacatttagtgctga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 24485189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 10348853 - 10348684
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| || | |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10348754  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    || |||||||||| ||| ||||||||||||||| |       || |||||||||| ||||||||||| |||||||||    
T  10348753 ctaattttatggtccccgtgacatttagtgctggt-------ttttttatcaattcatgtgtgccacgtgtgtaatt 10348684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 42673349 - 42673181
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  42673349 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 42673251  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||| | |||||||| || |       || |||||||||||||||||||||| |||||||||    
T  42673250 ctgattttatggtccccatcagatttagtgttggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 42673181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 26007670 - 26007505
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||  |||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctg 26007571  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||| |||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  26007570 attttatggtccccataacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 26007505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 165 - 343
Target Start/End: Original strand, 10348480 - 10348659
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||||| ||| ||||||||| |||||||   |||||||| |||||  ||| ||||||||||||||| ||||||||||||| ||||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttc 10348579  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||| || ||||||||||||||||||||| |||||| || ||||| ||||||| |||||||| ||||||||||||    
T  10348580 tgattttatagtccccatgacatttagtgctgatatgtctgtttttttattaattaatatgtgccacgtgtgtaatttca 10348659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 24485513 - 24485334
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||    
T  24485513 ggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattcccccttt 24485415  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-----ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    || |||||||||| ||||||||| ||||||||||| ||| ||     || ||||||||||||||||| |||| |||||||||    
T  24485414 ctaattttatggtccccatgaca-ttagtgctgatatgtttgttttcttttttatcaattaatgtgtaccacgtgtgtaatt 24485334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 42456247 - 42456079
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||  ||||||| ||||  ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  42456247 ggcttaattgcacttt--ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttcccccttt 42456151  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||| || |     | || ||||| |||||||||||||||| |||||||||    
T  42456150 ctgattttatggtccccatgacatttagtgatggt-----ttttttttataaattaatgtgtgccacgtgtgtaatt 42456079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 36181045 - 36180875
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||| ||||||||||||  ||||||| ||||||| ||||||| |||| ||||||||||||||  ||||||||||||| ||| ||    
T  36181045 aggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttcccttt 36180946  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| | ||||||||||||||||||| |       || ||||||||||||||||| |||| |||||||||    
T  36180945 tctgattttatgatccccatgacatttagtgctggt-------ttttttatcaattaatgtgtaccacgtgtgtaatt 36180875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 298
Target Start/End: Original strand, 53766166 - 53766296
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||| || ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttccccatttttg 53766264  T
Q  267 attttatggttcccatgacatttagtgctgat 298  Q
    ||||||||||  ||||||||||||||||||||    
T  53766265 attttatggtctccatgacatttagtgctgat 53766296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 44008454 - 44008286
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||  || ||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||| ||||||||||||||| ||||||    
T  44008454 ggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 44008356  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| | | ||||||||| ||||| |       || ||||||||||||||||||||||||||||||||    
T  44008355 ctgattttatggtcctcgtgacatttaatgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 44008286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 53766635 - 53766469
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||||||||| |||||||  ||||||||||| || |||| ||             ||||||||| |||||||| |    
T  53766635 aaggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaact-----------ccccctatatttttcccc-t 53766548  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||    
T  53766547 ttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatatgtgccacgtgtgtaatt 53766469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 21896564 - 21896391
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||||||| |||| |||| |||| |||||||| ||||||||||||||| |||| | |||||||||||||| ||| ||  |||| ||| |||    
T  21896564 ggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccattt 21896466  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
     ||||||||||||  || ||| |||||||| ||||||||| ||| || |||| |||||||||||||| |||| ||||    
T  21896465 ttgattttatggt--ccctgatatttagtgatgatgtgtcggtttttgatcatttaatgtgtgccacgtgtgcaatt 21896391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 42455852 - 42455948
Alignment:
Q  247 tatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||| | |||||| |||||||||||||||||| ||| ||||||||||||    
T  42455852 tatagttttccccctttctgattttatggtccccatgacgtttagtgatgatatatctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 42455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 275
Target Start/End: Original strand, 8314013 - 8314124
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||| |||| |||||||| |||||||||||| ||  ||| ||||| |||||||||| ||||||  ||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttcccccttt 8314112  T
Q  264 ctgattttatgg 275  Q
    ||||||||||||    
T  8314113 ctgattttatgg 8314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 340
Target Start/End: Original strand, 21895700 - 21895806
Alignment:
Q  235 gattttgccccctatagttttccccctttctgattttatggttccc-atgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatg 333  Q
    |||||||| ||| ||  |||| |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| || |||| ||||||| || ||| ||    
T  21895700 gattttgcaccccatcttttttcccctttctgattttatggtcccccatgacatttagtgatgatgtgtcggtttttgatcatttaatgtatgtcacgtg 21895799  T
Q  334 tgtaatt 340  Q
    |||||||    
T  21895800 tgtaatt 21895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 47666184 - 47666139
Alignment:
Q  367 tatttttcagattaattgataaaaataccatcattttcacgtgcct 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  47666184 tatttttaagattaattgataaaaataccatcattttcacgtgcct 47666139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 1928484 - 1928386
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||||||| || ||||||  ||||||||||||| |||||||||||||||  ||| ||||||| | |||||| ||||||  |||||||| ||||||    
T  1928484 ttaattgcatttt-cctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttccccttttctg 1928386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 20969073 - 20969019
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 21895656 - 21895714
Alignment:
Q  163 aggcttaattgca-tttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||    
T  21895656 aggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccat 21895714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 42455789 - 42455839
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 213  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 3644837 - 3644781
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||||||||||| |||  ||||  ||||||| |||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 8315136 - 8315083
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 217  Q
    ||||||||||||| ||| |||||||||| |||| |||||||| ||||||||||||    
T  8315136 aggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 10293608 - 10293662
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||||||  |||||||  |||| |||||||| |||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcacccc 10293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 10293963 - 10293909
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 10293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 217  Q
    ||||||||||||  ||||||||||||  |||||||||| || ||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 20968716 - 20968772
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||||  ||||||||||||  ||||  ||||||| |||||||||||||    
T  20968716 aaggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcacccc 20968772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 47871177 - 47871122
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| ||||||||| |||  ||||| ||||||| |||||||||||||    
T  47871177 aaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 47871122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 164 - 343
Target Start/End: Complemental strand, 49318219 - 49318041
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  49318219 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcccccttt 49318121  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49318120 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaatttca 49318041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 44911488 - 44911314
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 44911389  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44911388 attttatggttctcatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaattt 44911314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 44911024 - 44911201
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44911024 aggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 44911123  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||  ||||||||    
T  44911124 tctgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatgcgtgccacgagtgtaatt 44911201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 48104676 - 48104854
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  48104676 aaggtttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 48104775  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  48104776 ttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 48104854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 166 - 343
Target Start/End: Complemental strand, 50526524 - 50526347
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  266 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  50526424 gattttatggtccacatgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 50526347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 163 - 412
Target Start/End: Complemental strand, 50949620 - 50949370
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    |||| |||||||| ||| ||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  50949620 aggcataattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctt 50949521  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca-nnnnnnnnnnnnnnnnnn 361  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||                       
T  50949520 tctgattttatggttctcatgacatttagtgctgatgtgtgtgttatttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaa 50949421  T
Q  362 nntgatatttttcagattaattgataaaaataccatcattttcacgtgcct 412  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50949420 aatgatatttttcagattaattgataaaaataccatcattttcacgtgcct 50949370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 9347126 - 9347303
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9347225  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| | |||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  9347226 ctgattttatggtccgcatgacatttagcgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 9347303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 9347605 - 9347428
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  9347605 aggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 9347507  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtct-gttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||    
T  9347506 tctgattttatggttcccatgacatttagtgttgatgtgtctatttttttatcaattaatgtgtgccacatgtgtaatt 9347428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 50430132 - 50429958
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 50430033  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  50430032 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 50429958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 21687025 - 21687202
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 21687124  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  21687125 ctgattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 21687202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 50615674 - 50615499
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  50615674 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50615576  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  50615575 ctgattttatggtccccatgacatttagtgctgatgcgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 50615499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 50623502 - 50623327
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  50623502 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50623404  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  50623403 ctgattttatggtccccatgacatttagtgctgatgcgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 50623327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 4692489 - 4692311
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||| || ||||||||||| |||||    
T  4692489 aaggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttcccct 4692390  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  4692389 ttctgattttatggtccccatgacatttagtgctgatgtgtctattttttatcaattaatgtgtgccacgtgtgtaatt 4692311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 164 - 343
Target Start/End: Original strand, 27172116 - 27172291
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27172116 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 27172214  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||| ||||||||||||||||   || |||||||||| |||||||||||||||||||||| ||||||||||||    
T  27172215 ctgattttatgcttcccatgacatttag---tgttgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 27172291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 164 - 343
Target Start/End: Complemental strand, 6703948 - 6703769
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||| | |||||||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttcccccttt 6703849  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||    
T  6703848 ctgattttatggtcctcatgacatttagtgctgatatgtctgttttttatcaattaatgtatgccacgtgtgtaatttca 6703769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 28634208 - 28634034
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||||| |||| |||||||||    
T  28634108 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtaccacgtgtgtaatt 28634034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 46824334 - 46824156
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||| || ||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  46824334 aaggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 46824235  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    || |||||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||||| ||| |||||||||    
T  46824234 ttttgattttatggtccccatgacatttagtgctgaaatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 46824156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 42611183 - 42611363
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||    
T  42611183 aaggtttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccct 42611282  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||||||||||||| |||||||||||  || ||||||||||||| |||||||| |||||||||    
T  42611283 ttctgattttatggttcccatgacatttagtgttgatgtgtctgttttttttatcaattaatatgtgccacgtgtgtaatt 42611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 999579 - 999401
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||| ||||| |||||||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  999579 aggcttaattgcacttttccccc-tatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttccccctt 999481  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || |||||||||||||||||||||| |||||||||    
T  999480 tctgattttatggtccccatgacatttagtgctgatgcgtctgttttttttatcaattaatgtgtgccacgtgtgtaatt 999401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 49318496 - 49318323
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||||||||| ||||| |||| ||||||||||||||  ||||||||||||||||  |||    
T  49318496 ggcttaattgcatttttccccc-tatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctatagttttccc--ttt 49318400  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  49318399 ctgattttatggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacatatgtaatt 49318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 4692022 - 4692196
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||| | || ||||||||||| ||||||  ||||||||| || || ||||||||||||| ||||||||||||||||||| ||||||||    
T  4692022 ggcttaattgcacttt-ctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctatagttt-cccccttt 4692119  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4692120 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaatt 4692196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 28633719 - 28633889
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||| |||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  28633719 aggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 28633818  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||||||||||||||| |       || |||||||||||||||||||||| |||||||||    
T  28633819 tctgattttatggttcccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 28633889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 32163098 - 32162928
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccctt 32162999  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||||       || ||||||||||||||||| |||| |||||||||    
T  32162998 tctgattttatggtccccatgacatttagtgctgat-------ttttttatcaattaatgtgttccacgtgtgtaatt 32162928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 164 - 336
Target Start/End: Original strand, 13918446 - 13918618
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| || |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13918545  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgt 336  Q
    |||||||||||||  | ||||||||||||| | || |||||||| ||||||||||||||||| |||| |||||    
T  13918546 ctgattttatggtcactatgacatttagtgtttatatgtctgttttttatcaattaatgtgtaccacgtgtgt 13918618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 42611665 - 42611491
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||| ||||||||||||| |||||||| ||||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctg 42611566  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  42611565 attttatggtccccataacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgcaatt 42611491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 49317752 - 49317927
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||| |||||||||||||||||||  |||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  49317752 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttcccccttt 49317850  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||| || ||| |||||||||    
T  49317851 ctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgt-tgtcacgtgtgtaatt 49317927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 46823846 - 46824011
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| |||||||||||||||| |||        || |||||||||||||||||||||| |||||||||    
T  46823946 attttatggtacccatgacatttagtgttga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 46824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 999110 - 999286
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||||||| ||||||||| |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||| || |    
T  999110 aaggtttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttctcc-t 999207  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||  ||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||||    
T  999208 ttctgattttatggtctccatgacatttagtgttaatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 999286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 162 - 304
Target Start/End: Original strand, 20480166 - 20480307
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  20480166 aaggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 20480264  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtct 304  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  20480265 ttctgattttatggtccccatgacatttagtgctgatatgtct 20480307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 48105170 - 48105001
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48105071  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||| ||||||||||| |       || |||||||||||||| ||||||| |||||||||    
T  48105070 ctgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgcgtgccacgtgtgtaatt 48105001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 26814694 - 26814862
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 26814793  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||         | || |||||||||||||||||||||| |||||||||    
T  26814794 ctgattttatggtccccatgacatttagtgc--------gttttttttatcaattaatgtgtgccacgtgtgtaatt 26814862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 44224148 - 44223994
Alignment:
Q  189 tagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatt 288  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |  ||||||||    
T  44224148 tagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctgattttatggtccttatgacatt 44224049  T
Q  289 tagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  44224048 tagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 44223994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 326
Target Start/End: Original strand, 20371038 - 20371199
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||  |||||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||    
T  20371038 aaggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagtttt-cccct 20371134  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 326  Q
    ||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||    
T  20371135 ttctgattttatggtccctatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 20371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 164 - 336
Target Start/End: Complemental strand, 21687520 - 21687348
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||| ||| ||||||||| |||| ||||||||||||| ||||||| ||| ||| |||| |||||||||||||| ||| || |||||||||||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttcccccttt 21687422  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgt 336  Q
    ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||    
T  21687421 ctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgt 21687348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 50429654 - 50429833
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||| | ||||||||  |||| ||||| ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||  |||    
T  50429654 aaggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatcct 50429753  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||||||||||||  || |||||||||||| ||||||||| |||||||||    
T  50429754 ttctgattttatgg-tcccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgccacgtgtgtaatt 50429833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 27172597 - 27172427
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  27172597 aaggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg-cccctatagttttccccct 27172499  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||| |       || ||||||||||||||| |||||| |||||||||    
T  27172498 ttctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtctgccacgtgtgtaatt 27172427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 6703459 - 6703627
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||| || |||||||||| ||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||    
T  6703459 aggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccttt 6703558  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  6703559 tctgattttatggtccccatgacatttagtgctg--------gtt-tttatcaattaatgtgtgccacgtgtgtaatt 6703627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 26815174 - 26815006
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  26815174 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctt 26815075  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||| |||||||||    ||     || |||||||||||||||||||||| |||||||||    
T  26815074 tctgattttatggtccccatgatatttagtgc----gt-----ttttttatcaattaatgtgtgccacgtgtgtaatt 26815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 165 - 340
Target Start/End: Complemental strand, 13918920 - 13918751
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||| ||     
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttt 13918821  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| |||||||||||||||||||       | || |||||||||||||||||| ||| |||||||||    
T  13918820 tgattttatggtccccatgacatttagtgctg------tttttttttatcaattaatgtgtgtcacgtgtgtaatt 13918751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 20371406 - 20371272
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| || |||| |||||||| ||||||||||||||||||| |||||||    
T  20371406 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 20371308  T
Q  263 tctgattttatggttcccatgacatttagtgctgat 298  Q
    |||||||||||||| ||||||||||||| |||||||    
T  20371307 tctgattttatggtccccatgacatttaatgctgat 20371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 19008805 - 19008661
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||||||||| || ||||||||||||||| |||||||||||    
T  19008805 aggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccctt 19008706  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgtt 307  Q
    |||||||| ||||| ||| |  ||| | | |||||||||||||||    
T  19008705 tctgatttgatggtaccccttgcatctggcgctgatgtgtctgtt 19008661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 20480665 - 20480534
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||||||||||| || |||| |||||||||||||  ||||||||||| || |||||||    
T  20480665 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt--ccccctatagtgtttccccttt 20480569  T
Q  264 ctgattttatggttcccatgacatttagtgctgat 298  Q
    ||||||||||||| ||||||||||||| |||||||    
T  20480568 ctgattttatggtccccatgacatttaatgctgat 20480534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 164 - 298
Target Start/End: Original strand, 47498301 - 47498433
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||  |||||||||||||||||||||||  |||||||| ||||| |||| |||| ||||||||||||| ||||||||||| ||||||    
T  47498301 ggcttaattgcacttt--ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctatagttttctcccttt 47498398  T
Q  264 ctgattttatggttcccatgacatttagtgctgat 298  Q
     ||||||||||||  ||||||||||||||||||||    
T  47498399 ttgattttatggtctccatgacatttagtgctgat 47498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 50949164 - 50949317
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||| | ||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||                    ||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgattttaccc--------------------tg 50949243  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  50949244 attttatggttctcatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 50949317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 39692056 - 39691942
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||  ||| ||||| | |||||||| ||||||  ||||||||||    
T  39692056 aaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttccccct 39691957  T
Q  262 ttctgattttatggt 276  Q
    |||||||||||||||    
T  39691956 ttctgattttatggt 39691942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 50615289 - 50615373
Alignment:
Q  256 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  50615289 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaatt 50615373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 50623117 - 50623201
Alignment:
Q  256 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  50623117 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaatt 50623201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 49284407 - 49284515
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  49284407 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 49284506  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  49284507 ttctgattt 49284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 6002237 - 6002343
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  |||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6002336  T
Q  264 ctgattt 270  Q
    |||||||    
T  6002337 ctgattt 6002343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 32162750 - 32162866
Alignment:
Q  185 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 284  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||| ||     ||||||||||||| |||||||||||||||||||| |||||||    
T  32162750 cctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc-at-----cccctatagtttttcccctttctgattttatggtccccatga 32162843  T
Q  285 catttagtgctgatgtgtctgtt 307  Q
    |||||| ||||||| ||| ||||    
T  32162844 catttaatgctgatatgtttgtt 32162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 343
Target Start/End: Original strand, 44223747 - 44223854
Alignment:
Q  227 aaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 326  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||        ||| |||||||||||||| |||    
T  44223747 aaacgagcgattttgccccctatagtttttcccctttctgattttatgg-tctcatgacatttagtgctg--------gttttttatcaattaatgcgtg 44223837  T
Q  327 ccacatgtgtaatttca 343  Q
    |||  ||||||||||||    
T  44223838 ccatgtgtgtaatttca 44223854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 275
Target Start/End: Original strand, 33085669 - 33085780
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||| | |||||| ||||||| |||| ||||||| ||||||||||||||| ||||| |||||| ||||||||| ||  ||  |||||| |||    
T  33085669 aaggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccca-tgttt-aaacgaacgattttgcacctcatccttttcctcct 33085766  T
Q  262 ttctgattttatgg 275  Q
    ||||||||||||||    
T  33085767 ttctgattttatgg 33085780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 8109049 - 8108991
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||    
T  8109049 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 49285081 - 49285003
Alignment:
Q  192 tttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattt 270  Q
    ||||||||||||| |||||||||||||||  ||| |||| ||||||||||| ||| ||  |||||||||||||||||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgattt 49285003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 44911287 - 44911242
Alignment:
Q  367 tatttttcagattaattgataaaaataccatcattttcacgtgcct 412  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44911287 tatttttcagattaattaataaaaataccatcattttcacgtgcct 44911242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 6002946 - 6002842
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    |||||||||| |||||  ||||||  |||  |||||||| |||||||||||||||  ||| |||||||||||||||| ||  ||  ||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttct 6002847  T
Q  266 gattt 270  Q
    |||||    
T  6002846 gattt 6002842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 47955304 - 47955360
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  47955304 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 50615238 - 50615289
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 213  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  50615238 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 50623066 - 50623117
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 213  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  50623066 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 19007774 - 19007848
Alignment:
Q  233 gcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgtt 307  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| |  ||| | | |||||||||||||||    
T  19007774 gcgattttgccccctatagttttccctctttctgatttgatggtcccccttgcatctggcgctgatgtgtctgtt 19007848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 6712215 - 6712279
Alignment:
Q  209 tttgcaccccattgtttaaaacgagcgatttt-gccccctatagttttccccctttctgatttta 272  Q
    |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||  |||||||    
T  6712215 tttgcaccccatagttttaaacgagcgattttatccccctatagttttcccccttttcgatttta 6712279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 48190771 - 48190827
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 48190827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 19007733 - 19007783
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 213  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  19007733 aaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 48191410 - 48191353
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||||| ||||| |||||||  ||||||||| ||| |||||||||||||||    
T  48191410 aggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccat 48191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 47498547 - 47498493
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||| ||||||||| ||||||||| |||||||| | |||||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 22149755 - 22149701
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 216  Q
    |||| ||||||||| |||||||||||||  ||||| ||||||| |||||||||||    
T  22149755 aaggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 39690793 - 39690847
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 217  Q
    ||||||| ||||| |||| ||||||||| || |||||||||| ||||||||||||    
T  39690793 aggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 13589714 - 13589659
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| ||||||||| |||  ||||| ||||||| |||||||||||||    
T  13589714 aaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 17518653 - 17518602
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||| ||||||||| |||  ||||||||||||| |||||||||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 4e-79; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 162 - 343
Target Start/End: Original strand, 26207359 - 26207539
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26207359 aaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcct 26207457  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  26207458 ttctgattttatggttcccatgacatttaatgctgatgtgtttgttatttatcaattaatgtgtgccacgtgtgtaatttca 26207539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 162 - 322
Target Start/End: Complemental strand, 26207802 - 26207642
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26207802 aaggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcct 26207703  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatg 322  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  26207702 ttctgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatg 26207642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 164 - 343
Target Start/End: Complemental strand, 169493 - 169314
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 169394  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
     |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  169393 ttgattttatggtccccatgacatttagtgttgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 169314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 28196829 - 28196650
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  28196829 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 28196730  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  28196729 ttctgattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 28196650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 341
Target Start/End: Original strand, 28196345 - 28196523
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  28196345 aggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 28196444  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  28196445 tctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaattt 28196523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 32703704 - 32703527
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccctttt 32703605  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  32703604 ctgattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacatgtgtaatt 32703527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 23539840 - 23540015
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||    
T  23539840 aggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctt 23539937  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23539938 tctgattttatggttcccatgacatttagtgctgatgtgtctattatttatcaattaatgtgtgccacgtgtgtaatt 23540015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 163 - 343
Target Start/End: Original strand, 9023243 - 9023423
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  9023243 aggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttccccctt 9023342  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    | |||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  9023343 tatgattttatggtccccatgacatttaatgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 9023423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 162 - 341
Target Start/End: Original strand, 32703223 - 32703402
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||| | |||| |||||||||||||||||||||||||||||||||||    
T  32703223 aaggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccct 32703322  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  32703323 ttctgattttatggtccccgtgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattt 32703402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 9380307 - 9380483
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| | |||||||||||||  |||| |||||||| |||||||||||||||||||||| |||||||||    
T  9380407 ctgattttatggtcctcatgacatttagtattgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 9380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 39744520 - 39744342
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  39744520 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 39744421  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||| |||| ||||||||||||||||||||| |||||| || |||||||||||||||||| ||| |||||||||    
T  39744420 tctgattttgtggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 39744342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 292781 - 292958
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||||||| | ||| |||| |||||||||||||||||||||| |||||||||||||    
T  292781 aggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttccccctt 292880  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||||    
T  292881 tctgattttatggtccccatgacatttagtgctgatatgtctgttttttattaattaatgtgtgccacgtgtgtaatt 292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 182 - 340
Target Start/End: Complemental strand, 25162349 - 25162191
Alignment:
Q  182 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 281  Q
    ||||||||| |||| ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25162349 ccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtcccca 25162250  T
Q  282 tgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  25162249 tgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 25162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 23540306 - 23540130
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| ||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttcccccttt 23540207  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||||| ||| |||||||||    
T  23540206 ctgattttatggtccccatgacatttagtgctgatgtgtgtgttttttattaattaatgtgtgtcacgtgtgtaatt 23540130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 164 - 343
Target Start/End: Complemental strand, 43292411 - 43292234
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-ccccttt 43292313  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||| || || ||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  43292312 ctgattttat-gtcccaatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 43292234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 169011 - 169191
Alignment:
Q  162 aaggcttaattgcatttttc-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccc 260  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||    
T  169011 aaggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccc 169110  T
Q  261 tttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||| | ||| |||||||||    
T  169111 tttctgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgagtcacgtgtgtaatt 169191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 48405960 - 48406138
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||| |||||||||||||||| ||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  48405960 aaggcttaattgcacttttcccc-ctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttccccct 48406058  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||| |||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  48406059 ttctgactttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 48406138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 48406425 - 48406262
Alignment:
Q  178 tttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggtt 277  Q
    ||||||||||||| ||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtc 48406326  T
Q  278 cccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||||||||| ||| ||||||    
T  48406325 cccatgacatttaatgcttatgtgtctgttttttatcaattaatgtgtgccacgtgtataattt 48406262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 9380796 - 9380627
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctt 9380697  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||        ||| |||||| ||||||||||||||| |||||||||    
T  9380696 tctgattttatggtccccatgacatttagtgctg--------gttttttatccattaatgtgtgccacttgtgtaatt 9380627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 39086677 - 39086499
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| ||| |||||||||||||||||| |||||||||||  || |||| |||||||||||||||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttcccccttt 39086578  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||   ||||||||||||||||||||||||||  || ||||||||||||||||||| || |||||||||    
T  39086577 ctgattttatggtctgcatgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgctacgtgtgtaatt 39086499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 165 - 340
Target Start/End: Original strand, 25161879 - 25162047
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||| |||||| ||||||||||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  25161979 tgattgtatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 25162047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 164 - 307
Target Start/End: Complemental strand, 4239420 - 4239277
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttcccccttt 4239321  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgtt 307  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||    
T  4239320 ctgattttatggtccccatgacatttagtgttgatatgtctgtt 4239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 293273 - 293102
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  293273 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccct 293174  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||  ||||||| ||||||||||| |       || ||||||||||||||||||||||||||||||||    
T  293173 ttctgattttatggcccccatgaaatttagtgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 293102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 9023736 - 9023565
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  9023736 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccct 9023637  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||| | |||||||| || |       || ||||||||||||| |||||||| |||||||||    
T  9023636 ttctgattttatggtccccatcagatttagtgttggt-------ttttttatcaattaatatgtgccacgtgtgtaatt 9023565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 39744029 - 39744198
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  39744029 aggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttccccctt 39744128  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||| |||  ||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  39744129 tctgattttatggtccccgtgatgtttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 39744198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 43292038 - 43292168
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||||  ||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 43292137  T
Q  265 tgattttatggttcccatgacatttagtgct 295  Q
    |||||||||||| | ||||||||||||||||    
T  43292138 tgattttatggtcctcatgacatttagtgct 43292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 186 - 341
Target Start/End: Complemental strand, 39912519 - 39912364
Alignment:
Q  186 ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgac 285  Q
    |||||||||  |||||||| ||||||||| ||||| |||| ||||||| ||||||||| ||||||||||| | ||||| ||||||||| || ||||||||    
T  39912519 ctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcgcctttatgattttatagtccccatgac 39912420  T
Q  286 atttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||    
T  39912419 atttagtgctgatatgtccgttttttatcaattaatgtgtgccacgtgtgtaattt 39912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 340
Target Start/End: Complemental strand, 12758237 - 12758089
Alignment:
Q  185 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 284  Q
    ||||||||||||||||| |||| |||||||| |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||    
T  12758237 cctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctgattttatggtccctatga 12758138  T
Q  285 catttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||  |       || |||||||||||||||||||||| |||||||||    
T  12758137 catttagtgctagt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 12758089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 44468959 - 44468849
Alignment:
Q  182 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 281  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||| | |||||    
T  44468959 ccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttat-gatccca 44468861  T
Q  282 tgacatttagtg 293  Q
    ||||||||||||    
T  44468860 tgacatttagtg 44468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 12757788 - 12757943
Alignment:
Q  186 ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgac 285  Q
    |||||||||| |||||||| ||||||||| | ||| |||| ||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||||     
T  12757788 ctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattttatggtccccatgat 12757887  T
Q  286 atttagtgctgatgtgt-ctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| | |  | || |||||||||||||||||| ||| |||||||||    
T  12757888 atttagtgctgatatctgtttttttttatcaattaatgtgtggcacgtgtgtaatt 12757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 343
Target Start/End: Original strand, 39912052 - 39912223
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||| |||||||||||   ||||||| |||||| || || || |||| |||||| |||||||||||| |||||||||||||||    
T  39912052 aaggcttaattgcacttttcctccctatagtttattaattgtgcgattttacatcc-atagttttaaacgaacgattttgcccc-tatagttttccccct 39912149  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||| ||||| | |||||||| ||        ||| |||||||||||||||||||||| ||||||||||||    
T  39912150 ttctgattttatggtccccatcagatttagtgttg--------gttttttatcaattaatgtgtgccacgtgtgtaatttca 39912223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 43051308 - 43051200
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||| ||    
T  43051308 aaggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctct 43051209  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  43051208 ttctgattt 43051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 36095815 - 36095922
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||||||  |||| |||||    
T  36095815 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat-ctttttcccct 36095913  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  36095914 ttctgattt 36095922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 50678778 - 50678885
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  50678778 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 50678877  T
Q  263 tctgattt 270  Q
    ||||||||    
T  50678878 tctgattt 50678885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 50679478 - 50679372
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  ||||||||||||  |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 50679379  T
Q  264 ctgattt 270  Q
    |||||||    
T  50679378 ctgattt 50679372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 36096526 - 36096423
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||| ||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctg 36096427  T
Q  267 attt 270  Q
    ||||    
T  36096426 attt 36096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 56505692 - 56505795
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||  ||| ||  |||| ||||||| ||| ||  |||||||||||    
T  56505692 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 56505791  T
Q  263 tctg 266  Q
    ||||    
T  56505792 tctg 56505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 43050605 - 43050713
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| |||||  ||||||  ||| ||||||||| |||||||||||||||  ||| ||||||| |||||||| ||| ||  ||||||||||    
T  43050605 aaggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccct 43050704  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  43050705 ttctgattt 43050713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 26207565 - 26207610
Alignment:
Q  367 tatttttcagattaattgataaaaataccatcattttcacgtgcct 412  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  26207565 tatttttcagattaattaataaaaataccatcattttcacgtgcct 26207610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 11529169 - 11529246
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgc 242  Q
    ||||||||||| |||||| |||||   |||||||||||||||||||||||||||||  ||| || || ||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgc 11529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 45830251 - 45830145
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||| ||| ||||| |||||||  |||| |||||||| |||||| ||||||||  ||| ||| |||||||||||| ||| ||  |||| ||||||    
T  45830251 aggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccat-ctttttcccctt 45830153  T
Q  263 tctgattt 270  Q
    ||||||||    
T  45830152 tctgattt 45830145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 56506629 - 56506522
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| ||| |||  |||||||||||||  |||||| || ||||  ||| ||  |||||||||||| ||| ||  |||||||||||    
T  56506629 aggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttccccctt 56506530  T
Q  263 tctgattt 270  Q
    ||||||||    
T  56506529 tctgattt 56506522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 24775839 - 24775781
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||| ||||||| |||||  |||| |||||||| |||||||||||||||    
T  24775839 aaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccat 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 16555871 - 16555762
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccctt 262  Q
    |||||||||||| ||||||||| |||  ||||| ||||||| |||||||||||||||  |||     |||||||||||| ||| ||  |||| |||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 16555772  T
Q  263 tctgatttta 272  Q
    ||||||||||    
T  16555771 tctgatttta 16555762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 13198962 - 13198906
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  13198962 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 13198906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 18077258 - 18077202
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| ||||| |||||||  ||||| ||||||| |||||||||||||    
T  18077258 aaggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacccc 18077202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 54508813 - 54508868
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 217  Q
    |||||||||||||| |||| || || ||  ||||||||||||||||||||||||||    
T  54508813 aaggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  165 gcttaattgcatttttcccccctatagttt-gccaattgtgtgattttgcacccc 218  Q
    ||||||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 49178866 - 49178816
Alignment:
Q  168 taattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||| ||||| |||||||  ||||||||||||| |||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacccc 49178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 11241715 - 11241659
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||| | ||||||||| |||  ||||||||||||| |||||||||||||||    
T  11241715 aggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcaccccat 11241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 6e-75; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 41790494 - 41790667
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41790494 ttaattgcatttttcccc-ctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 41790592  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41790593 attttatggttctcatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaattt 41790667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 167 - 343
Target Start/End: Complemental strand, 26692871 - 26692695
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26692772  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  26692771 attttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 26692695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 8851146 - 8851324
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  8851146 aaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 8851245  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||||    
T  8851246 ttctgattttatggtccccatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 41790967 - 41790790
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctctt 41790868  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||  ||||||||    
T  41790867 tctgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatgcgtgccacgagtgtaatt 41790790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 182 - 340
Target Start/End: Complemental strand, 19141885 - 19141727
Alignment:
Q  182 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 281  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19141885 ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 19141786  T
Q  282 tgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||    
T  19141785 tgacatttagtgctgatgtgtttattatttatcaattaatatgtgccacgtgtgtaatt 19141727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 162 - 341
Target Start/End: Original strand, 26692394 - 26692573
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| |||| ||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| ||||||| |||| |||||    
T  26692394 aaggtttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccct 26692493  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26692494 ttctgattttatggtccccaagacatttattgctgatgtgtctgttttttatcaattaatgtgtgccacatgtgtaattt 26692573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 17851458 - 17851282
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||  |   |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  17851458 aaggcttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccct 17851359  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  17851358 ttctgattttatgg-tcccatgacatttagtgctgatatgtctgtt-tttatcaattaatgtgtgccacgtgtgtaatt 17851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 16910827 - 16911005
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| | |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctccttt 16910926  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||| |||| ||||||  || |||||||||||||||||||||| ||| |||||    
T  16910927 ctgattttatggtccccatgacatttagtgttgatatgtctgttttttttatcaattaatgtgtgccacgtgtttaatt 16911005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 8851638 - 8851469
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  8851638 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt-cccct 8851540  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||||||||||||||||        || |||||||||||||||||||||| |||||||||    
T  8851539 ttctgattttatggtccccatgacatttagtgctga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 8851469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 7664727 - 7664559
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 7664628  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||         | || |||||||||||||||||||||| |||||||||    
T  7664627 ctgattttatggtccccatgacatttagtgc--------gttttttttatcaattaatgtgtgccacgtgtgtaatt 7664559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 166 - 340
Target Start/End: Complemental strand, 6325399 - 6325225
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| || | ||||||||||||||||||||||||||||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  266 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    || |||||||| || | || ||||||||||||| ||| |||| |||||||||||||||||| ||| |||||||||    
T  6325299 gactttatggtccctaggatatttagtgctgatatgtatgttttttatcaattaatgtgtgtcacgtgtgtaatt 6325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 7979566 - 7979742
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    |||||| |||||| |||||||   ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||    
T  7979566 aggctttattgcacttttccct--tatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctt 7979663  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| | || |||||||||||||||||| |||||| || |||||||||||||||||| ||| |||||||||    
T  7979664 tctgattttatgatccctatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 7979742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 7664247 - 7664415
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  7664247 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctt 7664346  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||| |||||||||    ||     || |||||||||||||||||||||| |||||||||    
T  7664347 tctgattttatggtccccatgatatttagtgc----gt-----ttttttatcaattaatgtgtgccacgtgtgtaatt 7664415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 17850978 - 17851146
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||||| |||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa-cgagcgattttgccccctatagatttcccccttt 17851076  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
     |||||||||||| ||||||| ||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  17851077 atgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 17851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 165 - 340
Target Start/End: Complemental strand, 16911321 - 16911154
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  16911321 gcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 16911223  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||  || ||||||||||||||| |       || |||||||||||||||||||| |||||||||||    
T  16911222 tgattttatggtctccgtgacatttagtgctggt-------ttttttatcaattaatgtgtgccgcatgtgtaatt 16911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 166 - 340
Target Start/End: Original strand, 19141446 - 19141611
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    |||||||||| |||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||| ||| |||||||||||||||||||         
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccc----- 19141539  T
Q  266 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
       |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  19141540 ---tttatgatccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 19141611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 6324924 - 6325049
Alignment:
Q  171 ttgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattt 270  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T
Q  271 tatggttcccatgacatttagtgctg 296  Q
    |||||  |||||||||||||||||||    
T  6325024 tatggcccccatgacatttagtgctg 6325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 5380014 - 5379870
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||    
T  5380014 aggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccccctt 5379915  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgtt 307  Q
    |||||||| ||||| ||| |||||| | | |||||||||||||||    
T  5379914 tctgatttgatggtccccctgacatctggcgctgatgtgtctgtt 5379870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 18749750 - 18749906
Alignment:
Q  189 tagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatt 288  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||||  |||||||||||||||||||||  ||||||||||||||||||  ||||| |||||    
T  18749750 tagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctatagtttt-tccctttctgattttatgggccccataacatt 18749848  T
Q  289 tagtgctgatgtgtctg---ttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||||||||||   || |||||||||||||||||||||| ||||||||||||    
T  18749849 tagtgctgatgtgtctgtttttttttatcaattaatgtgtgccacgtgtgtaatttca 18749906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 5793445 - 5793578
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||||||| | |||||||||||||||| ||||||||| || || |||| |||||||||||||||||||||||||||||||| ||    
T  5793445 aaggtttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctct 5793544  T
Q  262 ttctgattttatggttcccatgacatttagtgct 295  Q
    ||||||||||||||| |||||||||||| |||||    
T  5793545 ttctgattttatggtccccatgacattttgtgct 5793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 5378660 - 5378804
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| ||| ||| |||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctctt 5378759  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgtt 307  Q
    |||||||| ||||| ||| || ||| | | |||||||||||||||    
T  5378760 tctgatttgatggtccccctggcatctggcgctgatgtgtctgtt 5378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 7980058 - 7979890
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||| || | |||||||||| ||||||| ||||||||||||||| |||| ||||||||||||| ||| ||||||||||| |||||    
T  7980058 aaggcttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttcccct 7979960  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||||||| |||||||| ||        ||| |||||||||||||||||||||| |||||||||    
T  7979959 ttctgattttatggtccccatgatatttagtgttg--------gtt-tttatcaattaatgtgtgccacgtgtgtaatt 7979890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 165 - 340
Target Start/End: Complemental strand, 18750178 - 18750018
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| || |||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||              |||    
T  18750178 gcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct--------------ttc 18750094  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||    
T  18750093 tgattttatggtccccatgacatttagtgctgatgtgtttgttttttatcaattaatgtgtgtcacgtgtgtaatt 18750018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 37720202 - 37720307
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||| |||||    
T  37720202 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtttt-cccct 37720299  T
Q  262 ttctgatt 269  Q
    ||||||||    
T  37720300 ttctgatt 37720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 2638818 - 2638926
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  2638818 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccct 2638917  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  2638918 ttctgattt 2638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 2639537 - 2639430
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  2639537 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 2639438  T
Q  263 tctgattt 270  Q
    ||||||||    
T  2639437 tctgattt 2639430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 26841586 - 26841693
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  26841586 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 26841685  T
Q  263 tctgattt 270  Q
    ||||||||    
T  26841686 tctgattt 26841693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 26842292 - 26842186
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||| |||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 26842193  T
Q  264 ctgattt 270  Q
    |||||||    
T  26842192 ctgattt 26842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 38490894 - 38490718
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||| || ||||||||||| ||||||||| ||||||||| | ||| |||| |||||||||||||||| ||| ||  ||||||||||||    
T  38490894 ggcttaattgcacttt-cctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttcccccttt 38490796  T
Q  264 ctgattttatggttcc-catgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
     |||||| | ||  || ||| || ||||||| ||||||  ||||| || |||| ||||||| |||||| |||||||||    
T  38490795 atgatttcaaggcccctcataacttttagtgatgatgtagctgtttttgatcatttaatgtttgccacgtgtgtaatt 38490718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 7591204 - 7591307
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||| | ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 7591303  T
Q  267 attt 270  Q
    ||||    
T  7591304 attt 7591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 18296077 - 18296182
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||| | ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||| ||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttc 18296176  T
Q  265 tgattt 270  Q
    ||||||    
T  18296177 tgattt 18296182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 7591904 - 7591798
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||| |||| | |||||  |||| |||||||| |||||||||||||||  ||| |||||||||||||||| ||  ||  ||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttcccccttt 7591805  T
Q  264 ctgattt 270  Q
    |||||||    
T  7591804 ctgattt 7591798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 6171512 - 6171456
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  6171512 aaggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 20347520 - 20347464
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  20347520 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 30190922 - 30190977
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  30190922 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 18296749 - 18296691
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||    
T  18296749 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 24832329 - 24832387
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  24832329 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 24832387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 41790694 - 41790739
Alignment:
Q  367 tatttttcagattaattgataaaaataccatcattttcacgtgcct 412  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  41790694 tatttttcagattaattaataaaaatactatcattttcacgtgcct 41790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 11883621 - 11883677
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  11883621 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 11883980 - 11883926
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 40469427 - 40469481
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||| ||||||||| |||||  ||||| ||||||| |||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcacccc 40469481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 29230281 - 29230334
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 216  Q
    ||||||||||||| |||||| | ||||  |||| ||||||||||||||||||||    
T  29230281 aggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 43495307 - 43495356
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgatttt 211  Q
    |||||||||||||| ||||||| |||||| ||||| ||||||| ||||||    
T  43495307 aaggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 40469785 - 40469729
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||| ||||||||| |||| ||||||||  ||||| ||||||| |||||||||||||    
T  40469785 aaggtttaattgcactttttccccctatcttttgctaattgtgcgattttgcacccc 40469729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 7654604 - 7654426
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||    
T  7654604 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccct 7654505  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7654504 ttctgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 7654426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 29074427 - 29074250
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  29074427 aaggcttaattgc-tctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccct 29074329  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  29074328 ttctgattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 29074250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 29079191 - 29079014
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  29079191 aaggcttaattgc-tctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccct 29079093  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  29079092 ttctgattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 29079014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 29107000 - 29106823
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  29107000 aaggcttaattgc-tctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccct 29106902  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  29106901 ttctgattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 29106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 33974353 - 33974176
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 33974254  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||  |||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  33974253 ctgattttatggtctccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 33974176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 2354409 - 2354584
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2354409 ggcttaattgcatttttcccc-ctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttcccccttt 2354507  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  2354508 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatatgtgccacgtgtgtaatt 2354584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 162 - 338
Target Start/End: Complemental strand, 2354866 - 2354691
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  2354866 aaggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatagtttt-cccct 2354768  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaa 338  Q
    |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  2354767 tcatgattttatggttcccatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaa 2354691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 10087912 - 10087737
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10087813  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| || ||||||||||||||||||| ||| |||| |||||| ||||||||||||||| |||||||||    
T  10087812 ctgattttatgg-tctcatgacatttagtgctgatatgtttgttttttatcgattaatgtgtgccacgtgtgtaatt 10087737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 167 - 343
Target Start/End: Complemental strand, 32734047 - 32733871
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctg 32733948  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||||||||||| ||||||||||||| ||||||||  |||| |||||||||||| ||| ||||||||||||    
T  32733947 attttatggttcccatgatatttagtgctgatatgtctgtttattattaattaatgtgtgtcacgtgtgtaatttca 32733871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 165 - 340
Target Start/End: Complemental strand, 22755142 - 22754968
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||||||||  ||||||||| ||||| || ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagttttcccc-tttc 22755044  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  22755043 tgattttattgtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 22754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 184 - 340
Target Start/End: Original strand, 13176639 - 13176795
Alignment:
Q  184 ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatg 283  Q
    ||||||||||||||||||||  ||||||| | |||||  ||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  13176639 ccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattttatggtccccgtg 13176738  T
Q  284 acatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  13176739 acatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 13176795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 22684411 - 22684243
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||| |||||||    
T  22684411 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccccttt 22684313  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||| ||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  22684312 ctgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 22684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 22754657 - 22754825
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||| |||||||    
T  22754657 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccccttt 22754755  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||| ||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  22754756 ctgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 22754825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 298
Target Start/End: Original strand, 32733555 - 32733691
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| |||| ||||||||| ||| |||||||||||||||| |  ||||||||| ||||| |||| |||||||| |||||||| ||||||||||| |||||    
T  32733555 aaggtttaagtgcattttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccct 32733654  T
Q  262 ttctgattttatggttcccatgacatttagtgctgat 298  Q
    |||||||||||||||||||||||||||||||||||||    
T  32733655 ttctgattttatggttcccatgacatttagtgctgat 32733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 13177111 - 13176984
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||| ||||| ||||||||| |||||| || |||||||| |||||| |||| ||| |||| ||||||||||||||||||| ||||||| |||||||    
T  13177111 aaggcttagttgcacttttccccc-tatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccct 13177013  T
Q  262 ttctgattttatggttcccatgacattta 290  Q
    ||||||||||||||| |||||||||||||    
T  13177012 ttctgattttatggtccccatgacattta 13176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 33829691 - 33829584
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  33829691 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 33829592  T
Q  263 tctgattt 270  Q
    ||||||||    
T  33829591 tctgattt 33829584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 33828990 - 33829096
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 33829089  T
Q  264 ctgattt 270  Q
    |||||||    
T  33829090 ctgattt 33829096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 33973867 - 33974030
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||| ||||||||| ||||||||||| || ||||| ||||||| ||   || |||| | ||||||||||||| ||||||||||||| ||  |||||     
T  33973867 ttaattgtatttttccctcctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctatagtttttcc--tttcta 33973964  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| |||||||||||||||| ||        ||| |||||||||||||||| ||||| |||||||||    
T  33973965 attttatggtccccatgacatttagtgttg--------gttttttatcaattaatgtgcgccacgtgtgtaatt 33974030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 2354681 - 2354638
Alignment:
Q  367 tatttttcagattaattgataaaaataccatcattttcacgtgc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2354681 tatttttcagattaattgataaaaataccatcattttcacgtgc 2354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 3403717 - 3403773
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 3403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 3404044 - 3403989
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  3404044 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 18241852 - 18241908
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  18241852 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18241908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 18242210 - 18242156
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||||||   ||||||  ||||||||||||| |||||||||||||    
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcacccc 18242156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 5e-72; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 163 - 343
Target Start/End: Complemental strand, 12498983 - 12498800
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  12498983 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttccccctt 12498884  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg---ttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||||||| ||||||||||||||||||||||||||||   || |||||||||||||||||||||| ||||||||||||    
T  12498883 tctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttttatcaattaatgtgtgccacgtgtgtaatttca 12498800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 26571219 - 26571043
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctt 26571120  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  26571119 tctgattttatggtccccatgacatttagtgctgatatgtctgtt-tttatcaattaatgtgtgtcacgtgtgtaatt 26571043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 163 - 330
Target Start/End: Original strand, 12498566 - 12498733
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 12498665  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgt-tatttatcaattaatgtgtgccac 330  Q
    ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12498666 tctgattttatggtt-ccatgacatttagtgctgatgtgtctgtctttttatcaattaatgtgtgccac 12498733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 162 - 341
Target Start/End: Complemental strand, 3888718 - 3888539
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||||| | |||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  3888718 aaggtttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 3888619  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3888618 ttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacatgtgtaattt 3888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 19514525 - 19514703
Alignment:
Q  164 ggcttaattgcatttttcccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    |||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 19514624  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatt-tatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||    
T  19514625 tctgattttatggtccccatgacatttagtgctgatatgtctgtttttgtatcaattaatgtgtgccacgtgtgtaatt 19514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 3888239 - 3888415
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    ||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 3888338  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  3888339 ctgattttatgg-tcccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 3888415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 165 - 340
Target Start/End: Complemental strand, 22729492 - 22729318
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  265 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| || ||||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||    
T  22729393 tgattttatggtccctatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 22729318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 2817147 - 2817325
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||  ||| |||||||||||||||||||||||| |||| |||||    
T  2817147 aaggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctata-tttttcccct 2817245  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  2817246 ttctgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 2817325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 162 - 343
Target Start/End: Complemental strand, 19515019 - 19514845
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||  ||||||||||||||||||||||||||    
T  19515019 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccct 19514920  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||||||||||||||||||||||| |       || |||||||||||||||||| ||| ||||||||||||    
T  19514919 ttctgattttatggttcccatgacatttagtgctggt-------ttttttatcaattaatgtgtgacacgtgtgtaatttca 19514845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 21207229 - 21207395
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||||||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  21207329 attttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 21207395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 185 - 340
Target Start/End: Complemental strand, 41072247 - 41072092
Alignment:
Q  185 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 284  Q
    ||||||||||| |||||||  |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  41072247 cctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccatga 41072148  T
Q  285 catttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||    
T  41072147 catttagtgctgatgtgtctgttttttatcgattaatgtgtgtcacgtgtgtaatt 41072092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 162 - 341
Target Start/End: Complemental strand, 34147566 - 34147389
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||| |||||||||||||| |||||||| ||||||||||| | | |||| |||||||||||||||||||||||||||||||||||    
T  34147566 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccct 34147467  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaattt 341  Q
    ||||||||||||||| ||| ||||||||||   ||||||||||| || |||||||||||||||||| ||| ||||||||||    
T  34147466 ttctgattttatggtccccgtgacatttag---tgatgtgtctgtttttttatcaattaatgtgtgtcacgtgtgtaattt 34147389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 34147139 - 34147316
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||   ||||||||  |||||||| ||||||||||||| | |||| |||||||||||||||||||||||||||||||||||    
T  34147139 aaggcttaattgcacttttccct--tatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccct 34147236  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||| || |||||||||||||||||| ||| |||||||||    
T  34147237 ttctgattttatggtccccgtgacatttagtgctgatgtatctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 34147316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 43464246 - 43464078
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  43464246 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccctt 43464148  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  43464147 tctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 43464078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 163 - 343
Target Start/End: Original strand, 26570728 - 26570900
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    |||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  26570728 aggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctt 26570827  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||||||| |||||||||||||| ||||        ||| |||||||||||||||||||||| | ||||||||||    
T  26570828 tctgattttatggtccccatgacatttagcgctg--------gttttttatcaattaatgtgtgccacgtttgtaatttca 26570900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 162 - 343
Target Start/End: Complemental strand, 11317030 - 11316857
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||  || || || ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  11317030 aaggtttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctct 11316931  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||| |||||||||||||||||||        ||| ||||||||||||||| |||||| ||||||||||||    
T  11316930 ttctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtctgccacgtgtgtaatttca 11316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 37780796 - 37780631
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg-cccctatag-tttcccccttt 37780699  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| ||||||||||||||||||||         | |||||||||||||||||||||| |||||||||    
T  37780698 ctgattttatggtccccatgacatttagtgctga---------tttttatcaattaatgtgtgccacgtgtgtaatt 37780631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 37610200 - 37610367
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||       
T  37610200 aaggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccc--- 37610295  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
           |||||||| ||||| |||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||    
T  37610296 -------tttatggtccccataacatttagtgttgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 37610367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 37610658 - 37610506
Alignment:
Q  178 tttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggtt 277  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  37610658 tttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtc 37610560  T
Q  278 cccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||| ||        ||| |||||||||||||||||||||| |||||||||    
T  37610559 cccatgacatttagtgttg--------gtt-tttatcaattaatgtgtgccacgtgtgtaatt 37610506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 37780318 - 37780486
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||       
T  37780318 aaggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc--- 37780413  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
           |||||||| ||||| |||||||||| |||| |||||| || |||||||||||||||||| ||| |||||||||    
T  37780414 -------tttatggtccccataacatttagtgttgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 37780486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 25940519 - 25940640
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||| ||||    
T  25940519 aaggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccct 25940618  T
Q  262 ttctgattttatggttcccatg 283  Q
    ||||||||||||||| ||||||    
T  25940619 ttctgattttatggtccccatg 25940640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 166 - 340
Target Start/End: Complemental strand, 2817626 - 2817454
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    |||||||||| ||||||||| |||||||||| ||||||| |||||| || || || |||| |||||||||||||||| ||||||| ||| || |||| ||    
T  2817626 cttaattgcacttttccccc-tatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctataatttccctcctt-ct 2817529  T
Q  266 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
     |||||||||| ||||||||||||||| ||||||||| |||| || ||||||||||||||||||| |||||||||    
T  2817528 aattttatggtccccatgacatttagtactgatgtgtttgtttttcatcaattaatgtgtgccacgtgtgtaatt 2817454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 22729008 - 22729138
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||||||| |||||||||  ||||||| ||||||||||  ||| |||| ||||||||||||||||||| |||||||||||||||||    
T  22729008 ggcttaattgcacttttccccc-tatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc-tatagttttcccccttt 22729105  T
Q  264 ctgattttatggttcccatgacatttagtgctg 296  Q
    ||||||||||||| |||||||||||||||||||    
T  22729106 ctgattttatggtccccatgacatttagtgctg 22729138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 298
Target Start/End: Complemental strand, 10098991 - 10098861
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||| || ||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||||| |||||||    
T  10098991 ttaattgcacttttcctcc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 10098893  T
Q  267 attttatggttcccatgacatttagtgctgat 298  Q
    |||||||||| ||||||||||||||| |||||    
T  10098892 attttatggtccccatgacatttagtactgat 10098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 43463754 - 43463932
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| ||||||||  |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  43463754 aaggtttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccct 43463852  T
Q  262 ttctg---------attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||         |||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  43463853 ttctgattttaattattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 43463932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 228 - 340
Target Start/End: Complemental strand, 25940955 - 25940842
Alignment:
Q  228 aacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtg 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||| || || ||||||||||||||||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctgatatgtttgtttttttatcaattaatgtgtg 25940856  T
Q  327 ccacatgtgtaatt 340  Q
     ||| |||||||||    
T  25940855 tcacgtgtgtaatt 25940842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 10098519 - 10098681
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| || ||||||||||| |||||||| ||||||||| || || |||| |||||||||||||||||||              ||||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgcccc--------------cttt 10098604  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||    
T  10098605 ctgattttatggtccccatgacatttagtgatgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 10098681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 30401885 - 30402053
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||||| | ||||||||||||||||||   |||||||| ||||| |||| |||| ||||||||||||||||||| |||| ||||||| ||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctataatttt-cccctttatg 30401983  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||| |||||||| ||    || | || |||||||||||||||||| ||| |||||||||    
T  30401984 attttatggtccccatgatatttagtgttg----gttttttttttatcaattaatgtgtgtcacgtgtgtaatt 30402053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 275
Target Start/End: Complemental strand, 25941067 - 25940956
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc-ccccttt 263  Q
    ||||||||||| ||||||| |||||||||||  |||| || ||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccccttt 25940968  T
Q  264 ctgattttatgg 275  Q
    ||||||||||||    
T  25940967 ctgattttatgg 25940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 18816951 - 18817058
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| ||||||||||||||||  || ||  |||||||||||    
T  18816951 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttccccctt 18817050  T
Q  263 tctgattt 270  Q
    ||||||||    
T  18817051 tctgattt 18817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 18817665 - 18817559
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 18817566  T
Q  264 ctgattt 270  Q
    |||||||    
T  18817565 ctgattt 18817559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 11350806 - 11350913
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||||||||| |||||||  |||||||||||||  ||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  11350806 aaggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccct 11350904  T
Q  262 ttctgattt 270  Q
    || ||||||    
T  11350905 ttttgattt 11350913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 11316717 - 11316812
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||| ||||||| |||||||||||||||||||   |||||||| || ||  ||| |||||||| |||||||||||||||||||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttccccctt 11316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 42919303 - 42919420
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||  |||| |||| |||| ||| ||||||||| |||||| |||| |||  ||| |||||||||||||||| ||||||  |||| |||||    
T  42919303 aaggcttaattgctctttttcccc-tatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccct 42919401  T
Q  262 ttctgattttatggttccc 280  Q
    |||||||||||||||||||    
T  42919402 ttctgattttatggttccc 42919420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 25115756 - 25115865
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccct 261  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || |||     |||||||||||| ||| ||  |||| ||||||    
T  25115756 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25115855  T
Q  262 ttctgatttt 271  Q
    ||||||||||    
T  25115856 ttctgatttt 25115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 25174848 - 25174957
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccct 261  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || |||     |||||||||||| ||| ||  |||| ||||||    
T  25174848 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25174947  T
Q  262 ttctgatttt 271  Q
    ||||||||||    
T  25174948 ttctgatttt 25174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 11351478 - 11351376
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||| | |||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||| | ||| ||  |||||||||||| ||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccat-cttttccccctttatg 11351380  T
Q  267 attt 270  Q
    ||||    
T  11351379 attt 11351376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 18433015 - 18433071
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 18433071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 16466797 - 16466746
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgca 214  Q
    ||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  16466797 aggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 26020448 - 26020506
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||| |||||| ||||||  ||||| ||||||| |||||||||||||||    
T  26020448 aaggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccat 26020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 22429250 - 22429194
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  22429250 aggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcaccccat 22429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 18433372 - 18433316
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  18433372 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 25116116 - 25116061
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  25116116 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 25175206 - 25175151
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  25175206 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25175151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 33324893 - 33324838
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| ||||  |||||||  |||| ||||||||||||||||||||||    
T  33324893 aggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 22428933 - 22428989
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    ||||||||||||| ||| |||||||||  ||||| ||||||| |||||||||||||||    
T  22428933 aggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccat 22428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 34577217 - 34577162
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| |||| |||| |||  ||||| |||||||||||||||||||||||    
T  34577217 ggcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcaccccat 34577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 162 - 343
Target Start/End: Complemental strand, 24473824 - 24473643
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  24473824 aaggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccct 24473725  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||    
T  24473724 ttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccatgtgtgtaatttca 24473643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 37396707 - 37396888
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  37396707 aggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 37396806  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatc----aattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| ||||||    |||||||||||||||| |||||||||    
T  37396807 tctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaattaatgtgtgccacgtgtgtaatt 37396888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 41662519 - 41662698
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||| ||||    
T  41662519 aaggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccct 41662618  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||| |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||||||    
T  41662619 ttctaattttatggttcccatgacatttagtgctgatgtgtttgtttttttatcaattaatgtgtgccacgtgtgtaatt 41662698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 34498610 - 34498433
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||| |||| || |||| ||||||||||| |||||||||||    
T  34498610 aggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccctt 34498511  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  34498510 tctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 34498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 24473343 - 24473519
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||||||| ||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttccccccttt 24473442  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  24473443 ctgattttatggtccccatgacatttagtgatgacgtgtctgttttttatcaattaacgtgtgccacgtgtgtaatt 24473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 6199151 - 6198973
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6199151 aggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctt 6199052  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| | ||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||||||    
T  6199051 tctgattttatgatccccatgacatttagtgctgaaatgtctgtttttttatcaattaatgtgtgccacatgtgtaatt 6198973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 164 - 343
Target Start/End: Original strand, 9623502 - 9623681
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| | | ||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||||||  |||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttcccttttt 9623601  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||| |||| ||| ||||||||||||    
T  9623602 ctgattttatggtccccttgacatttagtgctgatatgtctgttttttatcaattaatatgtgtcacgtgtgtaatttca 9623681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 16169661 - 16169485
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||| |||||||||||  ||||||||  | |||||| |  || |||| ||||||||||||||||||||||||||||| |||||||    
T  16169661 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttccccttt 16169562  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  16169561 ctgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 16169485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 37397199 - 37397031
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttcccccttt 37397100  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  37397099 ctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 37397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 166 - 343
Target Start/End: Original strand, 15444213 - 15444390
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    ||||||||||||||||||| ||||||||||||||||||   ||||| ||  |||| |||| |||||||||||||||| |||||||||||||||||||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  266 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 343  Q
    |||||||||||  |||||||||||||||||||| | |||||| ||||||||||||| |||||||| ||||||||||||    
T  15444313 gattttatggtctccatgacatttagtgctgatatctctgttttttatcaattaatatgtgccacgtgtgtaatttca 15444390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 20861694 - 20861561
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||    
T  20861694 aaggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccct 20861595  T
Q  262 ttctgattttatggttcccatgacatttagtgct 295  Q
    ||||||||||||||| ||||||||||||||||||    
T  20861594 ttctgattttatggtccccatgacatttagtgct 20861561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 162 - 296
Target Start/End: Original strand, 17431285 - 17431419
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| |||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  17431285 aaggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccct 17431384  T
Q  262 ttctgattttatggttcccatgacatttagtgctg 296  Q
    ||||||||||||||| |||||||||||||||||||    
T  17431385 ttctgattttatggtccccatgacatttagtgctg 17431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 167 - 340
Target Start/End: Original strand, 34498125 - 34498288
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||| |||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctatag-tttccccctttctg 34498223  T
Q  267 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||| ||||||||||||||||||||         | |||||||||||||||||||||| |||||||||    
T  34498224 attttatggtccccatgacatttagtgctga---------tttttatcaattaatgtgtgccacgtgtgtaatt 34498288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 6198657 - 6198827
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| ||| ||| || | ||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||    
T  6198657 aggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatt 6198756  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||| ||||||||||||||||||| |       || |||||||||||||||||||||| |||||||||    
T  6198757 tctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 6198827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 33727161 - 33726989
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| |||||| || ||||| ||  |||||||||| ||||||| ||||||||||  ||| |||| |||||||||||||||||||||||||||||||||||    
T  33727161 aaggtttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccct 33727062  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| |||||||||||||||||||       | || |||||||||||||||||||||| |||||||||    
T  33727061 ttctgattttatggtccccatgacatttagtgctg------gttttttttatcaattaatgtgtgccacgtgtgtaatt 33726989  T

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Target: chr8; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 15444698 - 15444569
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| |||| ||||||||| ||| ||||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||||| |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 15444599  T
Q  267 attttatggttcccatgacatttagtgctg 296  Q
    |||||||||| |||||||||||||||||||    
T  15444598 attttatggtccccatgacatttagtgctg 15444569  T

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Target: chr8; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 233 - 340
Target Start/End: Original strand, 33726734 - 33726841
Alignment:
Q  233 gcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacat 332  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||    
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaataaatgtgtgtcacat 33726833  T
Q  333 gtgtaatt 340  Q
    ||||||||    
T  33726834 gtgtaatt 33726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 25439181 - 25439052
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||| ||||||||| |||| |||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||    
T  25439181 aaggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatag-tttccccct 25439084  T
Q  262 ttctgattttatggttcccatgacatttagtg 293  Q
    || |||||||||||| ||||||||||||||||    
T  25439083 ttttgattttatggtccccatgacatttagtg 25439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 340
Target Start/End: Original strand, 16169174 - 16169342
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||  || ||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||| ||||||||||||||| ||||||    
T  16169174 ggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 16169272  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| | | ||||||||| ||||| |       || ||||||||||||||||||||||||||||||||    
T  16169273 ctgattttatggtcctcgtgacatttaatgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 16169342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 2856525 - 2856632
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||  ||||||||||||||||||||    
T  2856525 aggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccctt 2856624  T
Q  263 tctgattt 270  Q
    ||||||||    
T  2856625 tctgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 276
Target Start/End: Original strand, 15442765 - 15442875
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 265  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||  ||| ||||| |||||||||| ||||||  ||||||| |||| |    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgt 15442864  T
Q  266 gattttatggt 276  Q
    |||||||||||    
T  15442865 gattttatggt 15442875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 9823417 - 9823309
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  9823417 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 9823318  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  9823317 ttctgattt 9823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 39724102 - 39723996
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 39724003  T
Q  264 ctgattt 270  Q
    |||||||    
T  39724002 ctgattt 39723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 13026634 - 13026741
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| ||||||||||| |||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  13026634 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttccccctt 13026733  T
Q  263 tctgattt 270  Q
    ||||||||    
T  13026734 tctgattt 13026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 13027332 - 13027229
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 13027233  T
Q  267 attt 270  Q
    ||||    
T  13027232 attt 13027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 15042148 - 15042251
Alignment:
Q  167 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 266  Q
    ||||||||| ||| ||||| |||  |||||||||||||||||||||||||| ||||||| ||| |||||||||||| | | ||  |||||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccctttctg 15042247  T
Q  267 attt 270  Q
    ||||    
T  15042248 attt 15042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 9822748 - 9822854
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  |||  |||||||| |||||||||||||||  ||| |||||||||||||||| || |||  ||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttcccccttt 9822847  T
Q  264 ctgattt 270  Q
    |||||||    
T  9822848 ctgattt 9822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 22851390 - 22851496
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| |||||||  |||| |||||||| |||||||||||||||  ||| |||| ||||||||||| ||| ||  ||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttcccccttt 22851489  T
Q  264 ctgattt 270  Q
    |||||||    
T  22851490 ctgattt 22851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 25438794 - 25438853
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgttt 225  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttt 25438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 3307338 - 3307444
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||||||||| |||||||  |||| |||||||| ||||||||| |||||  ||| |||| ||||||||||| ||| ||  ||||| ||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctcccttt 3307437  T
Q  264 ctgattt 270  Q
    |||||||    
T  3307438 ctgattt 3307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 304
Target Start/End: Complemental strand, 13937444 - 13937303
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| |||||||||||||  |||| |||||||| || ||||||||||||  ||| ||||||| |||||||| ||  ||  |||||||||||    
T  13937444 aggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttccccctt 13937345  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtct 304  Q
    |||| ||| | ||  ||||||   ||||||| ||||||||||    
T  13937344 tctggtttgaaggcccccatgtgttttagtgatgatgtgtct 13937303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 13936721 - 13936827
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||| |||  ||| ||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||| |||||    
T  13936721 aaggcttaattgcacttttccccc-tatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccat-ctttttcccct 13936818  T
Q  262 ttctgattt 270  Q
    |||||||||    
T  13936819 ttctgattt 13936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 39723413 - 39723508
Alignment:
Q  175 atttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattt 270  Q
    ||||||| || ||||  ||||||||||||| ||||||||| |||||  ||| |||||||||||||||| ||| ||  |||||||||||||||||||    
T  39723413 atttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 39723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 41662457 - 41662349
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccctt 262  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||||||||||||| |  |||  |  |||||||||||| ||| ||  |||| |||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 41662358  T
Q  263 tctgatttt 271  Q
    |||||||||    
T  41662357 tctgatttt 41662349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 43246232 - 43246176
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||    
T  43246232 aaggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacccc 43246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 12281122 - 12281176
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 216  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  12281122 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 765736 - 765788
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 37752084 - 37752140
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccat 37752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 15156239 - 15156185
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  |||| |||||||| |||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 217  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 9623935 - 9623880
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| |||||  || |||||||||||||| |||||||||||||||||||    
T  9623935 ggcttaattgcacttttcatcc-tatagtttgccaatcgtgtgattttgcaccccat 9623880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 304
Target Start/End: Original strand, 6092775 - 6092915
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    ||||||||||||||||||  ||||||||  |||| |||||||| ||||||||| |||||  ||| ||  || ||||||||| ||| ||  |||||||| |    
T  6092775 aaggcttaattgcatttt--ccccctatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttcccctt 6092872  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtct 304  Q
    ||| ||||| | ||  ||||||   ||||||| ||||||||||    
T  6092873 ttcagatttaaaggcccccatgtgttttagtgatgatgtgtct 6092915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 340
Target Start/End: Complemental strand, 9623856 - 9623825
Alignment:
Q  309 tttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||||||||||||||||||||    
T  9623856 tttatcaattaatgtgtgccacatgtgtaatt 9623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 15155882 - 15155937
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  15155882 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 15155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 16928941 - 16928996
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| ||| |||||||||  ||||| ||||||| |||||||||||||    
T  16928941 aggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacccc 16928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  166 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 213  Q
    |||||||||| |||| ||||||||||||| ||||||||| ||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 16929296 - 16929242
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| ||||| |||||||  ||||| ||||||| |||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacccc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 37752470 - 37752416
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 37752416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 23123338 - 23123394
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||| ||||||| |||||  |||| |||||||| |||||| ||||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccat 23123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 164 - 340
Target Start/End: Complemental strand, 185328 - 185152
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctcttt 185229  T
Q  264 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||    
T  185228 ctgattttatggtccccatgacatttagtgctaatatgtctgttttttatcaattaatgtgtgccacatatgtaatt 185152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 184840 - 184971
Alignment:
Q  165 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 264  Q
    ||||||||||| ||||| || |||||||||| ||| ||||  |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttc 184939  T
Q  265 tgattttatggttcccatgacatttagtgctg 296  Q
    |||||||||||| |||||||||||||||||||    
T  184940 tgattttatggtccccatgacatttagtgctg 184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 328 - 506
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |    
T  328 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 427  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    ||||||||||||||| ||| ||||||||||||||||| ||| |||| |||||||||||||||||| ||| |||||||||    
T  428 ttctgattttatggtccccgtgacatttagtgctgatatgtttgttttttatcaattaatgtgtgtcacgtgtgtaatt 506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 816 - 685
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| |||| |||| |||||||||||||||||| |||||||||||||||  ||| ||||||||||||||| ||||||||||||| | | |||    
T  816 ggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg-cccctatagtttt-ctcattt 720  T
Q  264 ctgattttatggttcccatgacatttagtgctgat 298  Q
    ||||||||||||| ||||||||||||| |||||||    
T  719 ctgattttatggtccccatgacatttaatgctgat 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 38751 - 38573
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| || | |||||| ||||||||||||||||||||||||||||    
T  38751 aaggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccct 38652  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||| ||  |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||    
T  38651 ttctgattttatagtctccatgacatttagtgctgatatgtgtgttttttattaattaatgtgtgccacatgtgtaatt 38573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 197 - 340
Target Start/End: Original strand, 38284 - 38427
Alignment:
Q  197 caattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctg 296  Q
    |||||||| ||||||||| ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctg 38383  T
Q  297 atgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    || |||||||| |||||||||||||||||||||| |||||||||    
T  38384 atatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 38427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 162 - 340
Target Start/End: Original strand, 9903 - 10082
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccc 260  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| || |||| ||||||||||||||||||||||||||||||||||    
T  9903 aaggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccc 10002  T
Q  261 tttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    |||||||||||||||| ||||| |||||||||| |||| |||||||| ||||||||| |||||||||||| |||||||||    
T  10003 tttctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgccacgtgtgtaatt 10082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 234 - 340
Target Start/End: Complemental strand, 10332 - 10226
Alignment:
Q  234 cgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatg 333  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||| ||||||||| |||||||||||| ||    
T  10332 cgattttgcaccctatagttttccccctttctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgccacgtg 10233  T
Q  334 tgtaatt 340  Q
    |||||||    
T  10232 tgtaatt 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 326
Target Start/End: Original strand, 50073 - 50234
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| |||  |||||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||    
T  50073 aaggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagtttt-cccct 50169  T
Q  262 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 326  Q
    ||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||    
T  50170 ttctgattttatggtccctatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 50560 - 50426
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| || |||| |||||||| ||||||||||||||||||| |||||||    
T  50560 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 50462  T
Q  263 tctgattttatggttcccatgacatttagtgctgat 298  Q
    |||||||||||||| ||||||||||||| |||||||    
T  50461 tctgattttatggtccccatgacatttaatgctgat 50426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 20098 - 19921
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 262  Q
    ||||||||||||| ||||||||| ||||||||| |||||||| |||||||| |||||| |||| ||||   |||||||||||||||||| ||||||||||    
T  20098 aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctatag-tttccccctt 20000  T
Q  263 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 340  Q
    | |||||||||||| || ||||||||||||| |||| |||||| || |||||||||||||||||| ||| |||||||||    
T  19999 tttgattttatggtccctatgacatttagtgttgatatgtctgtttttttatcaattaatgtgtgtcacctgtgtaatt 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 162 - 296
Target Start/End: Original strand, 19619 - 19752
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 261  Q
    |||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||  |||||    
T  19619 aaggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctcccct 19717  T
Q  262 ttctgattttatggttcccatgacatttagtgctg 296  Q
    |||| |||||||||| ||||||||||||| |||||    
T  19718 ttctaattttatggtccccatgacatttaatgctg 19752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 6849 - 6743
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6750  T
Q  264 ctgattt 270  Q
    |||||||    
T  6749 ctgattt 6743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 6152 - 6258
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 263  Q
    |||||||||||| ||||| || ||||  ||||| ||||||| |||||| ||||||||  ||| ||| |||||||||||| ||| ||  ||||||||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttcccccttt 6251  T
Q  264 ctgattt 270  Q
    |||||||    
T  6252 ctgattt 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 6392 - 6448
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  6392 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 6448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 25425 - 25369
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  25425 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 25369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 1474 - 1420
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 438930 - 438984
Alignment:
Q  164 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 438984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 183718 - 183670
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattt 210  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| |||||    
T  183718 aaggcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 45861 - 45807
Alignment:
Q  163 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
    ||||||||||||| ||||||||| |||  ||||||||||||| |||||||||||||    
T  45861 aggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 45807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 1538 - 1566
Alignment:
Q  192 tttgccaattgtgtgattttgcaccccat 220  Q
    |||||||||||||||||||||||||||||    
T  1538 tttgccaattgtgtgattttgcaccccat 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 10010 - 10062
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgca 214  Q
    |||||||||||||| |||| ||||||||  ||||||||||||  |||||||||    
T  10010 aaggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 205685 - 205740
Alignment:
Q  162 aaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 218  Q
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T  205685 aaggcttaattgcattttt-ctccctatcttttgctaattgtgcgattttgcacccc 205740  T

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