View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21261_low_4 (Length: 418)
Name: NF21261_low_4
Description: NF21261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21261_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 5167493 - 5167720
Alignment:
| Q |
15 |
actcgtgaggggggagtagaatacaaacgaggggacgcgcgtgcatttggacggttaaaggaaatgaagttaggggaaaggtttgacggagtgagtgtaa |
114 |
Q |
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| T |
5167493 |
actcgtgaggggggagtagaatacaaacgaggggacgcgcgtgcatttggacggtgaaaggaaatgaagttaggggaaaggtttgacggagtgagtgtaa |
5167592 |
T |
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| Q |
115 |
ctgaagaggaaagaggaagtgtggcgtgggacttttggagtttgtggggagtcatcacctacaaatgtgagctctaagatagggacaatacaaaaacgta |
214 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5167593 |
ctgaaaaggaaagaggaagtgtggcgtgggacttttggagtttgtggggagtcatcacctacaaatgtgagctctaagatagggacaatacaaaaacgta |
5167692 |
T |
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| Q |
215 |
ttattgactttttcaacaacaaaaatac |
242 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
5167693 |
ttattgactttttcaacaacaaaaatac |
5167720 |
T |
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