View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21263_high_10 (Length: 316)
Name: NF21263_high_10
Description: NF21263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21263_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 16 - 302
Target Start/End: Original strand, 39638172 - 39638458
Alignment:
| Q |
16 |
gctctcacccgatctttttgaacctgacttgctagtcgaagtttcttgagtatcagttttcaccaaatcagtagccttctcagttgaatcaatataatca |
115 |
Q |
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| T |
39638172 |
gctctcacccgatctttttgaacctgacttgctagtcgaagtttcttgagtatcagttttcaccaaatcagtagccttctcagttgaatcaatataatca |
39638271 |
T |
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| Q |
116 |
aaggccttcccatcaacctgtaaagtattctcatcagccgtttcagtcacaatgatgtcgtttttatcctctcctcatacagtcacaaattccctcaaat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39638272 |
aaggccttcccatcaacctgtaaagtattctcatcagccgtttcagtcacaatgatgtcgtttttatcctctcctcatacagtcacaaattcccttaaat |
39638371 |
T |
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| Q |
216 |
atcactgtttcctcaaaatttgatcgaagaatttgattgctgaatttgctactattttttattgcttaagttgaaagtgacagccct |
302 |
Q |
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| T |
39638372 |
atcaatgtttcctcaaaatttgatagaagaatttgattgctgaatttgctactattttttattgcttaagttgaaagtgacagccct |
39638458 |
T |
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Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 13390043 - 13390100
Alignment:
| Q |
55 |
agtttcttgagtatcagttttcaccaaatcagtagccttctcagttgaatcaatataa |
112 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
13390043 |
agtttcttgagtatcagttttcaccaaaacagtagccttctcagttgaatcaatataa |
13390100 |
T |
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