View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21263_high_15 (Length: 263)
Name: NF21263_high_15
Description: NF21263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21263_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 43016323 - 43016099
Alignment:
| Q |
24 |
ataaataaatacaatacactatttgtacacctcataggtataaaattatgatcaagagtggaatctacaaaggaattcaataaaagccttcacgaaaact |
123 |
Q |
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| T |
43016323 |
ataaataaatacaatacactatttgtacacctcataggtatagaattatgatcaagagtggaatctacaaaggaattcaataaaagccttcacgaaaact |
43016224 |
T |
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| Q |
124 |
catttgttaatttcattctatagcaatatagagccaaaataatgcttctggtcatttttcaatctgtgatgttgctgtgatgcaagatacatgtgatgtg |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43016223 |
catttgttaatttcattctatagcaatatagagccaaaataatgcttctggtcatttttcaatctgtgatgttgctgtgatgcaagatacatgtgatgtg |
43016124 |
T |
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| Q |
224 |
actaactaaacaccaccgtcctttg |
248 |
Q |
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||||||||||||||||||||||||| |
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| T |
43016123 |
actaactaaacaccaccgtcctttg |
43016099 |
T |
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