View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21263_low_16 (Length: 255)
Name: NF21263_low_16
Description: NF21263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21263_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 12634405 - 12634634
Alignment:
| Q |
11 |
caaaggtggggtgagaaggtaaatagttactaactcatatacataagggaaaggcatttaacttttcaatatccgttcgtagacataatcattttgtgca |
110 |
Q |
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| T |
12634405 |
caaaagtggggtgagaaggtaaatggttactaactcatatacataagggaaaggcatttaacttttcaatatccgttcgtagacataatcattttgtgca |
12634504 |
T |
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| Q |
111 |
agaagtcacctaacttaatatattttttaggcactaaaataatgtagaccactcttcttgcttatacttatactagcttgtttacaatgtccttcatcta |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12634505 |
agaagtcacctaacttaatatattttttaggcactaaaataatgtagaccactcttcttgcttatacttatactagcttgtttacaatgtccttcatcta |
12634604 |
T |
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| Q |
211 |
ataattaccatcgacagttccatatatata |
240 |
Q |
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||||||||||| |||||||||||||||||| |
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| T |
12634605 |
ataattaccattgacagttccatatatata |
12634634 |
T |
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