View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21263_low_19 (Length: 232)
Name: NF21263_low_19
Description: NF21263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21263_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 962718 - 962506
Alignment:
| Q |
1 |
gaattctgcatataggatcacccaataggtcagtaacaagagaaggttttcctctttgtccaacctcacaaagcctctccaatttttctactcccacttt |
100 |
Q |
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| T |
962718 |
gaattctacatataggatcacccaataggtcagtaacaagagaaggttttcctctttgtccaacctcacaaagcctctccaatttttctactcccacttt |
962619 |
T |
|
| Q |
101 |
gtgtttctcttcatcataacttcttatctctatcactgcctcttcaaccttctttgatgatggtttttgccaattttcggctgctatcttcaaagacatt |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
962618 |
gtgtttctcttcatcataacttcttatcactatcactgcctcttcaaccttctttgatgatggtttttgccaattttcagctgctatcttcaaagacatt |
962519 |
T |
|
| Q |
201 |
gtgtataatataa |
213 |
Q |
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||||||||||||| |
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| T |
962518 |
gtgtataatataa |
962506 |
T |
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