View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21263_low_7 (Length: 376)

Name: NF21263_low_7
Description: NF21263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21263_low_7
NF21263_low_7
[»] chr7 (38 HSPs)
chr7 (107-362)||(29293145-29293400)
chr7 (106-283)||(29292921-29293098)
chr7 (106-286)||(17156966-17157146)
chr7 (106-286)||(3204968-3205148)
chr7 (110-286)||(18863970-18864146)
chr7 (107-283)||(37888833-37889011)
chr7 (105-283)||(37889136-37889315)
chr7 (105-279)||(10533032-10533206)
chr7 (106-271)||(37972286-37972451)
chr7 (106-283)||(20419201-20419379)
chr7 (105-284)||(9034865-9035045)
chr7 (107-283)||(13741557-13741732)
chr7 (107-283)||(48359320-48359494)
chr7 (106-273)||(13744121-13744287)
chr7 (107-283)||(9035169-9035347)
chr7 (107-283)||(3204669-3204843)
chr7 (106-283)||(38826789-38826968)
chr7 (106-283)||(22740155-22740325)
chr7 (106-283)||(42418590-42418768)
chr7 (105-283)||(20418886-20419057)
chr7 (110-286)||(22740467-22740641)
chr7 (100-283)||(37971953-37972128)
chr7 (105-283)||(18864288-18864457)
chr7 (105-283)||(42418913-42419084)
chr7 (126-283)||(36527402-36527559)
chr7 (107-283)||(36527686-36527852)
chr7 (100-227)||(48359592-48359718)
chr7 (105-213)||(13863311-13863419)
chr7 (106-213)||(44600083-44600190)
chr7 (107-213)||(44599489-44599595)
chr7 (97-213)||(13863905-13864020)
chr7 (105-213)||(8643714-8643822)
chr7 (105-161)||(9412325-9412381)
chr7 (99-163)||(13772633-13772697)
chr7 (107-161)||(3687656-3687710)
chr7 (106-168)||(16198970-16199032)
chr7 (105-209)||(46816263-46816367)
chr7 (107-161)||(13772901-13772955)
[»] chr3 (43 HSPs)
chr3 (107-283)||(47666213-47666389)
chr3 (107-283)||(53688181-53688356)
chr3 (95-283)||(40848839-40849026)
chr3 (105-283)||(27238463-27238641)
chr3 (106-283)||(53687887-53688063)
chr3 (107-286)||(42672978-42673156)
chr3 (105-283)||(47665909-47666087)
chr3 (106-283)||(26007181-26007357)
chr3 (107-283)||(48160211-48160387)
chr3 (121-283)||(22429474-22429636)
chr3 (107-271)||(3353128-3353289)
chr3 (125-283)||(3353428-3353587)
chr3 (110-283)||(27238786-27238951)
chr3 (106-283)||(40848520-40848692)
chr3 (107-283)||(44007967-44008143)
chr3 (106-283)||(36180555-36180730)
chr3 (108-283)||(22429159-22429327)
chr3 (99-236)||(48159889-48160026)
chr3 (110-283)||(24485025-24485189)
chr3 (107-283)||(10348684-10348853)
chr3 (107-283)||(42673181-42673349)
chr3 (105-283)||(26007505-26007675)
chr3 (108-286)||(10348480-10348659)
chr3 (107-283)||(24485334-24485513)
chr3 (107-283)||(42456079-42456247)
chr3 (105-283)||(36180875-36181046)
chr3 (110-241)||(53766166-53766296)
chr3 (107-283)||(44008286-44008454)
chr3 (106-283)||(53766469-53766634)
chr3 (107-283)||(21896391-21896564)
chr3 (190-286)||(42455852-42455948)
chr3 (107-218)||(8314013-8314124)
chr3 (99-209)||(1928386-1928495)
chr3 (178-283)||(21895700-21895806)
chr3 (310-355)||(47666139-47666184)
chr3 (105-163)||(21895655-21895714)
chr3 (105-156)||(42455788-42455839)
chr3 (107-161)||(20969019-20969073)
chr3 (107-163)||(3644781-3644837)
chr3 (105-160)||(8315083-8315137)
chr3 (107-161)||(10293608-10293662)
chr3 (107-161)||(10293909-10293963)
chr3 (107-160)||(1927772-1927825)
[»] chr8 (52 HSPs)
chr8 (19-219)||(15442675-15442875)
chr8 (106-286)||(24473643-24473823)
chr8 (98-283)||(37396699-37396888)
chr8 (96-283)||(6198973-6199161)
chr8 (105-283)||(34498433-34498611)
chr8 (106-283)||(41662520-41662698)
chr8 (107-283)||(24473343-24473519)
chr8 (107-286)||(9623502-9623681)
chr8 (107-283)||(16169485-16169661)
chr8 (107-283)||(37397031-37397199)
chr8 (109-286)||(15444213-15444390)
chr8 (106-238)||(20861561-20861693)
chr8 (106-239)||(17431286-17431419)
chr8 (110-283)||(34498125-34498288)
chr8 (105-283)||(6198656-6198827)
chr8 (101-283)||(33726989-33727165)
chr8 (105-239)||(15444569-15444703)
chr8 (176-283)||(33726734-33726841)
chr8 (107-283)||(16169174-16169342)
chr8 (126-236)||(25439052-25439161)
chr8 (105-213)||(2856524-2856632)
chr8 (23-96)||(15311763-15311836)
chr8 (23-96)||(15492132-15492205)
chr8 (106-213)||(9823309-9823416)
chr8 (107-213)||(39723996-39724102)
chr8 (105-213)||(13026633-13026741)
chr8 (110-213)||(13027229-13027332)
chr8 (105-213)||(15042143-15042251)
chr8 (107-213)||(9822748-9822854)
chr8 (107-213)||(22851390-22851496)
chr8 (109-168)||(25438794-25438853)
chr8 (107-213)||(3307338-3307444)
chr8 (105-247)||(13937303-13937445)
chr8 (106-213)||(13936722-13936827)
chr8 (118-213)||(39723413-39723508)
chr8 (107-214)||(41662349-41662457)
chr8 (106-161)||(43246176-43246231)
chr8 (106-159)||(12281123-12281176)
chr8 (109-161)||(765736-765788)
chr8 (107-163)||(37752084-37752140)
chr8 (107-161)||(15156185-15156239)
chr8 (107-160)||(3463946-3463999)
chr8 (100-247)||(6092770-6092915)
chr8 (107-163)||(9623880-9623935)
chr8 (105-161)||(15155881-15155937)
chr8 (105-161)||(16928940-16928996)
chr8 (252-283)||(9623825-9623856)
chr8 (109-156)||(33726696-33726743)
chr8 (107-161)||(16929242-16929296)
chr8 (107-161)||(37752416-37752470)
chr8 (99-159)||(22786832-22786892)
chr8 (107-163)||(23123338-23123394)
[»] chr1 (69 HSPs)
chr1 (107-286)||(49318041-49318219)
chr1 (94-284)||(44911314-44911504)
chr1 (105-283)||(44911023-44911201)
chr1 (110-283)||(48104681-48104854)
chr1 (109-286)||(50526347-50526524)
chr1 (105-355)||(50949370-50949621)
chr1 (107-283)||(9347126-9347303)
chr1 (105-283)||(9347428-9347606)
chr1 (110-283)||(50429958-50430132)
chr1 (107-283)||(21687025-21687202)
chr1 (107-283)||(50615499-50615674)
chr1 (107-283)||(50623327-50623502)
chr1 (106-283)||(4692311-4692488)
chr1 (107-286)||(27172116-27172291)
chr1 (95-283)||(999401-999590)
chr1 (107-286)||(6703769-6703948)
chr1 (105-283)||(28634034-28634213)
chr1 (106-283)||(46824156-46824333)
chr1 (110-283)||(42611188-42611363)
chr1 (104-283)||(32162928-32163100)
chr1 (107-283)||(49318323-49318496)
chr1 (107-283)||(4692022-4692196)
chr1 (105-283)||(28633718-28633889)
chr1 (107-279)||(13918446-13918618)
chr1 (110-283)||(42611491-42611665)
chr1 (107-283)||(49317752-49317927)
chr1 (110-283)||(46823846-46824011)
chr1 (107-283)||(48105001-48105170)
chr1 (110-283)||(999115-999286)
chr1 (106-247)||(20480167-20480307)
chr1 (107-283)||(26814694-26814862)
chr1 (132-286)||(44223994-44224148)
chr1 (107-279)||(21687348-21687520)
chr1 (106-269)||(20371039-20371199)
chr1 (106-283)||(50429655-50429833)
chr1 (99-283)||(26815006-26815181)
chr1 (106-283)||(27172427-27172596)
chr1 (105-283)||(6703458-6703627)
chr1 (108-283)||(13918751-13918920)
chr1 (107-241)||(20371272-20371406)
chr1 (105-250)||(19008661-19008806)
chr1 (107-241)||(20480534-20480665)
chr1 (107-241)||(47498301-47498433)
chr1 (110-283)||(50949164-50949317)
chr1 (106-219)||(39691942-39692055)
chr1 (199-283)||(50615289-50615373)
chr1 (199-283)||(50623117-50623201)
chr1 (106-213)||(49284408-49284515)
chr1 (107-213)||(6002237-6002343)
chr1 (128-250)||(32162750-32162866)
chr1 (170-286)||(44223747-44223854)
chr1 (106-218)||(33085670-33085780)
chr1 (135-213)||(49285003-49285081)
chr1 (106-163)||(8108991-8109048)
chr1 (310-355)||(44911242-44911287)
chr1 (109-213)||(6002842-6002946)
chr1 (106-161)||(47955305-47955360)
chr1 (176-250)||(19007774-19007848)
chr1 (106-156)||(50615239-50615289)
chr1 (106-156)||(50623067-50623117)
chr1 (152-215)||(6712215-6712279)
chr1 (107-163)||(48190771-48190827)
chr1 (99-163)||(48191353-48191417)
chr1 (93-156)||(19007721-19007783)
chr1 (100-161)||(47955608-47955669)
chr1 (105-160)||(39690792-39690847)
chr1 (108-163)||(47498493-47498547)
chr1 (110-159)||(22149701-22149750)
chr1 (109-161)||(17518602-17518653)
[»] chr4 (52 HSPs)
chr4 (106-286)||(26207360-26207539)
chr4 (107-286)||(169314-169493)
chr4 (106-265)||(26207642-26207801)
chr4 (105-284)||(28196344-28196523)
chr4 (106-283)||(28196650-28196828)
chr4 (107-283)||(32703527-32703704)
chr4 (105-283)||(23539839-23540015)
chr4 (105-286)||(9023242-9023423)
chr4 (106-284)||(32703224-32703402)
chr4 (107-283)||(9380307-9380483)
chr4 (105-283)||(39744342-39744521)
chr4 (105-283)||(292780-292958)
chr4 (125-283)||(25162191-25162349)
chr4 (107-283)||(23540130-23540306)
chr4 (102-286)||(43292234-43292416)
chr4 (106-283)||(169012-169191)
chr4 (121-284)||(48406262-48406425)
chr4 (106-283)||(48405961-48406138)
chr4 (105-283)||(9380627-9380797)
chr4 (107-283)||(39086499-39086677)
chr4 (108-283)||(25161879-25162047)
chr4 (107-250)||(4239277-4239420)
chr4 (106-283)||(293102-293272)
chr4 (96-283)||(9023565-9023745)
chr4 (93-283)||(39744016-39744198)
chr4 (108-238)||(43292038-43292168)
chr4 (129-284)||(39912364-39912519)
chr4 (128-283)||(12758089-12758237)
chr4 (125-236)||(44468849-44468959)
chr4 (129-283)||(12757788-12757943)
chr4 (106-286)||(39912053-39912223)
chr4 (106-213)||(43051200-43051307)
chr4 (105-213)||(50678777-50678885)
chr4 (106-213)||(36095816-36095922)
chr4 (107-213)||(50679372-50679478)
chr4 (110-213)||(36096423-36096526)
chr4 (105-209)||(56505691-56505795)
chr4 (110-213)||(43050610-43050713)
chr4 (310-355)||(26207565-26207610)
chr4 (108-185)||(11529169-11529246)
chr4 (105-213)||(45830145-45830252)
chr4 (105-213)||(56506522-56506630)
chr4 (107-215)||(16555762-16555871)
chr4 (106-163)||(24775781-24775838)
chr4 (106-161)||(13198906-13198961)
chr4 (106-161)||(18077202-18077257)
chr4 (108-161)||(8181992-8182046)
chr4 (105-163)||(11241659-11241716)
chr4 (111-161)||(49178816-49178866)
chr4 (106-160)||(54508814-54508868)
chr4 (104-161)||(3930480-3930536)
chr4 (105-161)||(16555513-16555569)
[»] chr5 (47 HSPs)
chr5 (95-286)||(12498800-12498994)
chr5 (105-283)||(26571043-26571220)
chr5 (105-273)||(12498565-12498733)
chr5 (110-284)||(3888539-3888713)
chr5 (107-283)||(19514525-19514703)
chr5 (107-283)||(3888239-3888415)
chr5 (108-283)||(22729318-22729492)
chr5 (97-283)||(2817139-2817325)
chr5 (106-286)||(19514845-19515018)
chr5 (110-283)||(21207229-21207395)
chr5 (128-283)||(41072092-41072247)
chr5 (106-284)||(34147389-34147565)
chr5 (105-283)||(43464078-43464247)
chr5 (105-286)||(26570727-26570900)
chr5 (106-283)||(34147140-34147316)
chr5 (100-286)||(11316857-11317035)
chr5 (107-283)||(37780631-37780796)
chr5 (106-283)||(37610201-37610367)
chr5 (121-283)||(37610506-37610658)
chr5 (106-283)||(37780319-37780486)
chr5 (106-226)||(25940520-25940640)
chr5 (109-283)||(2817454-2817626)
chr5 (101-239)||(22729002-22729138)
chr5 (105-241)||(10098861-10098996)
chr5 (110-283)||(43463759-43463932)
chr5 (171-283)||(25940842-25940955)
chr5 (107-283)||(10098519-10098681)
chr5 (110-283)||(30401885-30402053)
chr5 (108-218)||(25940956-25941067)
chr5 (105-213)||(18816950-18817058)
chr5 (107-213)||(18817559-18817665)
chr5 (110-205)||(11316717-11316812)
chr5 (106-213)||(11350807-11350913)
chr5 (126-223)||(42919323-42919420)
chr5 (105-214)||(25115755-25115865)
chr5 (105-214)||(25174847-25174957)
chr5 (103-213)||(11351376-11351485)
chr5 (105-157)||(16466746-16466798)
chr5 (107-163)||(18433015-18433071)
chr5 (105-163)||(22429194-22429251)
chr5 (106-163)||(26020449-26020506)
chr5 (105-161)||(25116061-25116117)
chr5 (105-161)||(25175151-25175207)
chr5 (105-161)||(33324838-33324894)
chr5 (106-161)||(18433316-18433371)
chr5 (105-163)||(22428932-22428989)
chr5 (107-163)||(34577162-34577217)
[»] chr2 (43 HSPs)
chr2 (110-284)||(41790494-41790667)
chr2 (110-286)||(26692695-26692871)
chr2 (105-283)||(41790790-41790968)
chr2 (110-283)||(8851151-8851324)
chr2 (125-283)||(19141727-19141885)
chr2 (110-284)||(26692399-26692573)
chr2 (130-283)||(17851282-17851433)
chr2 (107-283)||(16910827-16911005)
chr2 (106-283)||(8851469-8851637)
chr2 (107-283)||(7664559-7664727)
chr2 (109-283)||(6325225-6325399)
chr2 (105-283)||(7979565-7979742)
chr2 (99-283)||(7664240-7664415)
chr2 (107-283)||(17850978-17851146)
chr2 (108-283)||(16911154-16911321)
chr2 (109-283)||(19141446-19141611)
chr2 (98-250)||(5379870-5380022)
chr2 (114-239)||(6324924-6325049)
chr2 (132-286)||(18749750-18749906)
chr2 (105-250)||(5378659-5378804)
chr2 (110-238)||(5793450-5793578)
chr2 (106-283)||(7979890-7980057)
chr2 (108-283)||(18750018-18750178)
chr2 (106-212)||(37720203-37720307)
chr2 (106-213)||(2638819-2638926)
chr2 (105-213)||(2639430-2639538)
chr2 (105-213)||(26841585-26841693)
chr2 (107-213)||(26842186-26842292)
chr2 (107-283)||(38490718-38490894)
chr2 (110-213)||(7591204-7591307)
chr2 (108-213)||(18296077-18296182)
chr2 (107-213)||(7591798-7591904)
chr2 (99-161)||(30190915-30190977)
chr2 (106-161)||(6171456-6171511)
chr2 (106-161)||(20347464-20347519)
chr2 (106-163)||(18296691-18296748)
chr2 (106-163)||(24832330-24832387)
chr2 (310-355)||(41790694-41790739)
chr2 (106-161)||(11883622-11883677)
chr2 (107-161)||(11883926-11883980)
chr2 (105-159)||(29230280-29230334)
chr2 (107-161)||(40469427-40469481)
chr2 (106-154)||(43495308-43495356)
[»] chr6 (25 HSPs)
chr6 (97-283)||(29074250-29074435)
chr6 (97-283)||(29079014-29079199)
chr6 (97-283)||(29106823-29107008)
chr6 (106-283)||(7654426-7654603)
chr6 (107-283)||(33974176-33974353)
chr6 (107-283)||(2354409-2354584)
chr6 (106-281)||(2354691-2354865)
chr6 (107-283)||(10087737-10087912)
chr6 (110-286)||(32733871-32734047)
chr6 (108-283)||(22754968-22755142)
chr6 (127-283)||(13176639-13176795)
chr6 (107-283)||(22684243-22684411)
chr6 (107-283)||(22754657-22754825)
chr6 (99-241)||(32733549-32733691)
chr6 (106-233)||(13176984-13177110)
chr6 (105-213)||(33829584-33829692)
chr6 (107-213)||(33828990-33829096)
chr6 (110-283)||(33973867-33974030)
chr6 (310-353)||(2354638-2354681)
chr6 (107-163)||(3403717-3403773)
chr6 (105-161)||(3403989-3404045)
chr6 (106-161)||(18241853-18241908)
chr6 (107-161)||(18242156-18242210)
chr6 (104-161)||(10039673-10039729)
chr6 (105-161)||(13579651-13579706)
[»] scaffold0017 (2 HSPs)
scaffold0017 (99-283)||(185152-185336)
scaffold0017 (108-239)||(184840-184971)
[»] scaffold0460 (2 HSPs)
scaffold0460 (106-283)||(329-506)
scaffold0460 (107-241)||(685-816)
[»] scaffold0041 (2 HSPs)
scaffold0041 (106-283)||(38573-38750)
scaffold0041 (140-283)||(38284-38427)
[»] scaffold0029 (3 HSPs)
scaffold0029 (106-283)||(9904-10082)
scaffold0029 (177-283)||(10226-10332)
scaffold0029 (105-160)||(10320-10373)
[»] scaffold0069 (2 HSPs)
scaffold0069 (106-269)||(50074-50234)
scaffold0069 (107-241)||(50426-50560)
[»] scaffold0176 (2 HSPs)
scaffold0176 (105-283)||(19921-20099)
scaffold0176 (106-239)||(19620-19752)
[»] scaffold0328 (2 HSPs)
scaffold0328 (107-213)||(6743-6849)
scaffold0328 (107-213)||(6152-6258)
[»] scaffold0319 (1 HSPs)
scaffold0319 (106-161)||(6393-6448)
[»] scaffold0192 (1 HSPs)
scaffold0192 (106-161)||(25369-25424)
[»] scaffold0802 (1 HSPs)
scaffold0802 (107-161)||(1420-1474)
[»] scaffold0001 (2 HSPs)
scaffold0001 (107-161)||(438930-438984)
scaffold0001 (106-153)||(183670-183717)
[»] scaffold0110 (1 HSPs)
scaffold0110 (105-161)||(45807-45862)
[»] scaffold1221 (1 HSPs)
scaffold1221 (135-163)||(1538-1566)


Alignment Details
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 107 - 362
Target Start/End: Complemental strand, 29293400 - 29293145
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293301  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttcannnnnnnnnnnnnnnnnnnn 306  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||                        
T  29293300 ctgattttatggttcccatgacatttactgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaatttcatttttttaaaaataaaaaaa 29293201  T
Q  307 tgatatttttcagattaattgataaaaataccatcattttcacgtgccttcatctc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  29293200 tgatatttttcagattaattgataaaaataccatcattttcatgtgccttcttctc 29293145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 29292921 - 29293098
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29292921 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccctt 29293020  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  29293021 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattattgtgtgccacgtgtgtaatt 29293098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 106 - 286
Target Start/End: Original strand, 17156966 - 17157146
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  17156966 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctt 17157065  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  17157066 tctgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 17157146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 106 - 286
Target Start/End: Complemental strand, 3205148 - 3204968
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  3205148 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctt 3205049  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  3205048 tctgattttatggtccccatgacatttagtgttgatgtatctgttttttatcaattaatgtgtgccacgtgtgtaatttca 3204968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 110 - 286
Target Start/End: Original strand, 18863970 - 18864146
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  18864070 attttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 18864146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 37888833 - 37889011
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37888932  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||||||||||||||||||||||||  || |||||||||||| ||||||||| |||||||||    
T  37888933 ctgattttatggtccccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgccacgtgtgtaatt 37889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 37889315 - 37889136
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  37889315 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccct 37889216  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| ||||||||| |||||||||    
T  37889215 ttctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaacgtgtgccacgtgtgtaatt 37889136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 105 - 279
Target Start/End: Original strand, 10533032 - 10533206
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  10533032 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 10533131  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgt 279  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||| |||||    
T  10533132 ttctgattttatggtccccatgacatttagtgctgatgtgtttgttttttattaattaatttgtgccacgtgtgt 10533206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 37972451 - 37972286
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  37972451 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 37972352  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgcc 271  Q
    || ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  37972351 tcagattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgcc 37972286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 20419379 - 20419201
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  20419379 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 20419280  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  20419279 tctgattttatggtccccgtgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 20419201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 105 - 284
Target Start/End: Original strand, 9034865 - 9035045
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccc 203  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  9034865 taggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccc 9034964  T
Q  204 tttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  9034965 tttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttattaattaatgtgtgccacgtgtgtaattt 9035045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 13741557 - 13741732
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccacttt 13741656  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||| |||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  13741657 ctga-tttatggtccccgtgacatttagtgctgatctgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 13741732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 48359320 - 48359494
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttt-cccccttt 48359417  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  48359418 ctgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 48359494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 106 - 273
Target Start/End: Complemental strand, 13744287 - 13744121
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  13744287 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 13744189  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccac 273  Q
    | |||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  13744188 tttgattttatggtccccatgatatttagtgctgatgtgtctgttttttatcaattaatgtgtgccac 13744121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 9035347 - 9035169
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc-cccctt 205  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccctt 9035248  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| |  ||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  9035247 tctgattttatggtccagatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 9035169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 3204669 - 3204843
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||    
T  3204669 ggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctcttt 3204766  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  3204767 ctgattttatggtccccatgacatttattgctgatgtgtctattttttatcaattaatgtgtgccacgtgtgtaatt 3204843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 38826968 - 38826789
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||| |||||| || ||||||||||||||||||||||||||    
T  38826968 aggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccctt 38826869  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgtt--atttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| | ||||||||||||||||||||||||||||||   |||||||||||||||||| ||| |||||||||    
T  38826868 tctgattttatgatccccatgacatttagtgctgatgtgtctgtttcttttatcaattaatgtgtgtcacgtgtgtaatt 38826789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 22740155 - 22740325
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  22740155 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 22740254  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||| |       || ||||||||||||||||||||||||||||||||    
T  22740255 tctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 22740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 42418590 - 42418768
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||| || |||||||||||||||||||| ||||||| ||||||| | || || |||| ||||||||||||||||||||||||||||||||||||    
T  42418590 aggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccctt 42418689  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||| |||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  42418690 tctaattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 42418768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 20418886 - 20419057
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  20418886 taggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccct 20418985  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  20418986 ttctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 20419057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 110 - 286
Target Start/End: Complemental strand, 22740641 - 22740467
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||| ||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccc-tttatg 22740544  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||    
T  22740543 attctatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgcgtgccacgtgtgtaatttca 22740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 100 - 283
Target Start/End: Original strand, 37971953 - 37972128
Alignment:
Q  100 aaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc 199  Q
    |||| |||||||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  37971953 aaaattaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttt 37972052  T
Q  200 cccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||| |||||||||||||| ||||        ||| |||||||||||||||||| ||| |||||||||    
T  37972053 cccctttctgattttatggtccccatgacatttagcgctg--------gttttttatcaattaatgtgtgtcacgtgtgtaatt 37972128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 18864457 - 18864288
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||| | ||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||    
T  18864457 taggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccct 18864359  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||||        || |||||||||||||||||||||| |||||||||    
T  18864358 ttctgattttatggtccccatgacatttagtgctga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 18864288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 42419084 - 42418913
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccc 203  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  42419084 taggtttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccc 42418986  T
Q  204 tttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||| ||||||||||||||||||| |       || |||||||||||||||||||||| |||||||||    
T  42418985 tttctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 42418913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 36527402 - 36527559
Alignment:
Q  126 cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccat 225  Q
    ||||||||||||| |||||||| ||||||||||||||| |||| |||||| | ||||| |||| ||||||||| ||||||||||||||||| || |||||    
T  36527402 cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctgattttatagtccccat 36527501  T
Q  226 gacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||| ||| |||||||||| || |||||||||||||||||||||| |||||||||    
T  36527502 gacatttggtgatgatgtgtctattttttatcaattaatgtgtgccacgtgtgtaatt 36527559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 36527852 - 36527686
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||||||||||| | ||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  36527852 ggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 36527753  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||  ||||||||||||          ||||||| ||||||||||||| |||||||| |||||||||    
T  36527752 ctgattttatggtctccatgacattta----------gtctgttttttatcaattaatatgtgccacgtgtgtaatt 36527686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 48359718 - 48359592
Alignment:
Q  100 aaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc 199  Q
    |||||||||| |||||||| |||| |||| |||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  48359718 aaaagtaggcataattgcactttttcccc-tatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttc 48359620  T
Q  200 cccctttctgattttatggttcccatga 227  Q
    ||||||||||||||||||||||||||||    
T  48359619 cccctttctgattttatggttcccatga 48359592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 13863311 - 13863419
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||| ||    
T  13863311 taggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctct 13863410  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  13863411 ttctgattt 13863419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 44600190 - 44600083
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  44600190 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 44600091  T
Q  206 tctgattt 213  Q
    ||||||||    
T  44600090 tctgattt 44600083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 44599489 - 44599595
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 44599588  T
Q  207 ctgattt 213  Q
    |||||||    
T  44599589 ctgattt 44599595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 13864020 - 13863905
Alignment:
Q  97 ttaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtt 196  Q
    |||||||  ||||||||||||| ||||| |||||||  ||||||||||||| ||||| |||||||||  ||| |||||||||||||||| ||| ||  ||    
T  13864020 ttaaaaataaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatcttt 13863922  T
Q  197 ttccccctttctgattt 213  Q
    |||||||||||||||||    
T  13863921 ttccccctttctgattt 13863905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 8643822 - 8643714
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||  ||||||  ||| ||||||||| |||||||||||||||  | | |||||||||||||||| ||| ||  ||||||||||    
T  8643822 taggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttccccct 8643723  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  8643722 ttctgattt 8643714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 9412381 - 9412325
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  9412381 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 13772633 - 13772697
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||| |||||||||||||| |||||| ||||||  ||||| |||||||||||||||||||||||    
T  13772633 aaaaattaggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccat 13772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 3687710 - 3687656
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 3687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 16199032 - 16198970
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgttt 168  Q
    ||||||||||||| |||| |||  |||||||||||||||||| ||||||||||||||| ||||    
T  16199032 aggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttt 16198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 46816367 - 46816263
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||| ||| ||||  ||| |||||| || |||||||||||||||  ||| |||||||||||||||  ||| ||  |||| |||||    
T  46816367 taggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgtaccccatcatttttcccct 46816268  T
Q  205 ttctg 209  Q
    |||||    
T  46816267 ttctg 46816263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 13772955 - 13772901
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 47666389 - 47666213
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 47666290  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  47666289 ctgattttatggttcccatgacatttagtgctgatgtgtgtgttatttatcaattaatgtgtgccacgtgtgtaatt 47666213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 53688356 - 53688181
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||| | |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  53688356 ggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttcccccttt 53688258  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  53688257 ctgattttatgattctcatgacatttagtgttgatatgtctgttatttatcaattaatgtgtgccacatgtgtaatt 53688181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 283
Target Start/End: Complemental strand, 40849026 - 40848839
Alignment:
Q  95 aattaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatag 194  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||    
T  40849026 aattaaaaa-taggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatag 40848928  T
Q  195 ttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||| ||||||||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||| |||||||||    
T  40848927 ttttcaccctttctgattttatggtccccatgacatttagtgttgatatgcctgttttttatcaattaatgtgtgccacgtgtgtaatt 40848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 27238463 - 27238641
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||| | ||||||| |||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  27238463 taggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccct 27238562  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||  |||||||||    
T  27238563 ttctgattttatggtccccatgacttttagtgctgatatgtctgttttttatcaattaatgtgtgccatgtgtgtaatt 27238641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 53687887 - 53688063
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  53687887 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccctt 53687986  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||| ||||||||| |||||||||    
T  53687987 tctgattttatggtccccatgacatttagcgttgatgtgtctgtt-tttatcaattaacgtgtgccacgtgtgtaatt 53688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 107 - 286
Target Start/End: Original strand, 42672978 - 42673156
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttcccccttt 42673076  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
     |||||||||||  ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||    
T  42673077 atgattttatggcccccatgacatttagtgctgatatgtccgttttttatcaattaatgtgtgccacgtgtgtaatttca 42673156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 47665909 - 47666087
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||| |||| ||||||||| |||||||| ||||||||||| |||||||||||||||| |||||| || |||||||||||||||||    
T  47665909 taggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttccccct 47666008  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  47666009 ttttgattttatggttctcatgacatttagtggtgatgtgtctattatttatcaattaatgtgtgccacgtgtgtaatt 47666087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 26007181 - 26007357
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||  |||    
T  26007181 aggcttaattgcatttt-cccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatctt 26007279  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||||||    
T  26007280 tctgattttatggtccccatgacatttagtgctgatatatctgttttttatcaattaatgtgtgccacgtgtgtaatt 26007357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 48160387 - 48160211
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 48160288  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||| | |||||||||||||||| | || | |||||| |||||||||||||||||||||| |||||||||    
T  48160287 ctgattttatgatccccatgacatttagtgttaatttttctgttttttatcaattaatgtgtgccacgtgtgtaatt 48160211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 121 - 283
Target Start/End: Complemental strand, 22429636 - 22429474
Alignment:
Q  121 tttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggtt 220  Q
    |||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  22429636 tttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtc 22429537  T
Q  221 cccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  22429536 cccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 22429474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 107 - 271
Target Start/End: Original strand, 3353128 - 3353289
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttcccccttt 3353224  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgcc 271  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  3353225 ctgattttatggtccccatgacatttagtactgatgtgtctgttttttatcaattaatgtgtgcc 3353289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 125 - 283
Target Start/End: Complemental strand, 3353587 - 3353428
Alignment:
Q  125 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 224  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3353587 ccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtcccca 3353489  T
Q  225 tgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||| |||||||||    
T  3353488 tgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgccacgtgtgtaatt 3353428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 27238951 - 27238786
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccctttctg 27238852  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  27238851 attttatggttcccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 27238786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 40848520 - 40848692
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  40848520 aggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctt 40848618  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| |||||||||||||| ||||    || | || |||||||||||||||||||||| |||||||||    
T  40848619 tctgattttatggtccccatgacatttagcgctg----gttttttttttatcaattaatgtgtgccacgtgtgtaatt 40848692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 44007967 - 44008143
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||| |||||||||||  ||||||||  | |||||| |  || |||| ||||||||||||||||||||||||||||| |||||||    
T  44007967 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttccccttt 44008066  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  44008067 ctgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 44008143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 36180555 - 36180730
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||||  |||||||  ||||||||| |||||||| ||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  36180555 aggcttaattgcacatttcccc--tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctt 36180652  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||| ||||| ||| |||||||||    
T  36180653 tctgattttatggtccccatgacatttagtgttgatatgtctgttttttatcaattaacgtgtgtcacgtgtgtaatt 36180730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 22429159 - 22429327
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||||| |||||||| ||||||||||||| || ||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| |||||||||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  22429259 tgattttatggtccccatgacatttagtgctgat-------ttttttatcaattaatgtgtgccacatgtgtaatt 22429327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 48159889 - 48160026
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt 198  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  48159889 aaaaaataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt 48159988  T
Q  199 ccccctttctgattttatggttcccatgacatttagtg 236  Q
    ||||||||||||||||||| | ||| ||||||||||||    
T  48159989 ccccctttctgattttatgatccccgtgacatttagtg 48160026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 24485025 - 24485189
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||    
T  24485025 ttaattacatttttcctcc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctg 24485123  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||||||||||||||||||        || |||||||||||||||||||||| |||||||||    
T  24485124 attttatggtccccatgacatttagtgctga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 24485189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 10348853 - 10348684
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| || | |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10348754  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||||| ||| ||||||||||||||| |       || |||||||||| ||||||||||| |||||||||    
T  10348753 ctaattttatggtccccgtgacatttagtgctggt-------ttttttatcaattcatgtgtgccacgtgtgtaatt 10348684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 42673349 - 42673181
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  42673349 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 42673251  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||| | |||||||| || |       || |||||||||||||||||||||| |||||||||    
T  42673250 ctgattttatggtccccatcagatttagtgttggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 42673181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 26007675 - 26007505
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||| ||||||||| |||| ||||||||||||||||||||||  ||||||||||  |||  ||| |||||||||||||||||||||||||||||||||||    
T  26007675 taggtttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccct 26007576  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||| |||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  26007575 ttctgattttatggtccccataacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 26007505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 286
Target Start/End: Original strand, 10348480 - 10348659
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||||| ||| ||||||||| |||||||   |||||||| |||||  ||| ||||||||||||||| ||||||||||||| ||||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttc 10348579  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||| || ||||||||||||||||||||| |||||| || ||||| ||||||| |||||||| ||||||||||||    
T  10348580 tgattttatagtccccatgacatttagtgctgatatgtctgtttttttattaattaatatgtgccacgtgtgtaatttca 10348659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 24485513 - 24485334
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||    
T  24485513 ggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattcccccttt 24485415  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-----ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||||| ||||||||| ||||||||||| ||| ||     || ||||||||||||||||| |||| |||||||||    
T  24485414 ctaattttatggtccccatgaca-ttagtgctgatatgtttgttttcttttttatcaattaatgtgtaccacgtgtgtaatt 24485334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 42456247 - 42456079
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||  ||||||| ||||  ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  42456247 ggcttaattgcacttt--ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttcccccttt 42456151  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||| || |     | || ||||| |||||||||||||||| |||||||||    
T  42456150 ctgattttatggtccccatgacatttagtgatggt-----ttttttttataaattaatgtgtgccacgtgtgtaatt 42456079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 36181046 - 36180875
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||| ||||||||||||  ||||||| ||||||| ||||||| |||| ||||||||||||||  ||||||||||||| ||| |    
T  36181046 taggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttccctt 36180947  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | ||||||||||||||||||| |       || ||||||||||||||||| |||| |||||||||    
T  36180946 ttctgattttatgatccccatgacatttagtgctggt-------ttttttatcaattaatgtgtaccacgtgtgtaatt 36180875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 110 - 241
Target Start/End: Original strand, 53766166 - 53766296
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||| || ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttccccatttttg 53766264  T
Q  210 attttatggttcccatgacatttagtgctgat 241  Q
    ||||||||||  ||||||||||||||||||||    
T  53766265 attttatggtctccatgacatttagtgctgat 53766296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 44008454 - 44008286
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||  || ||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||| ||||||||||||||| ||||||    
T  44008454 ggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 44008356  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | | ||||||||| ||||| |       || ||||||||||||||||||||||||||||||||    
T  44008355 ctgattttatggtcctcgtgacatttaatgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 44008286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 53766634 - 53766469
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||||||||| |||||||  ||||||||||| || |||| ||             ||||||||| |||||||| ||    
T  53766634 aggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaact-----------ccccctatatttttcccc-tt 53766547  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||    
T  53766546 tctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatatgtgccacgtgtgtaatt 53766469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 21896564 - 21896391
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||||||| |||| |||| |||| |||||||| ||||||||||||||| |||| | |||||||||||||| ||| ||  |||| ||| |||    
T  21896564 ggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccattt 21896466  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
     ||||||||||||  || ||| |||||||| ||||||||| ||| || |||| |||||||||||||| |||| ||||    
T  21896465 ttgattttatggt--ccctgatatttagtgatgatgtgtcggtttttgatcatttaatgtgtgccacgtgtgcaatt 21896391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 42455852 - 42455948
Alignment:
Q  190 tatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||| | |||||| |||||||||||||||||| ||| ||||||||||||    
T  42455852 tatagttttccccctttctgattttatggtccccatgacgtttagtgatgatatatctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 42455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 8314013 - 8314124
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||| |||| |||||||| |||||||||||| ||  ||| ||||| |||||||||| ||||||  ||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttcccccttt 8314112  T
Q  207 ctgattttatgg 218  Q
    ||||||||||||    
T  8314113 ctgattttatgg 8314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 1928495 - 1928386
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt 198  Q
    ||||| |||| ||||||||||||| || ||||||  ||||||||||||| |||||||||||||||  ||| ||||||| | |||||| ||||||  ||||    
T  1928495 aaaaattaggtttaattgcatttt-cctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatcctttt 1928397  T
Q  199 ccccctttctg 209  Q
    |||| ||||||    
T  1928396 ccccttttctg 1928386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 21895700 - 21895806
Alignment:
Q  178 gattttgccccctatagttttccccctttctgattttatggttccc-atgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatg 276  Q
    |||||||| ||| ||  |||| |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| || |||| ||||||| || ||| ||    
T  21895700 gattttgcaccccatcttttttcccctttctgattttatggtcccccatgacatttagtgatgatgtgtcggtttttgatcatttaatgtatgtcacgtg 21895799  T
Q  277 tgtaatt 283  Q
    |||||||    
T  21895800 tgtaatt 21895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 47666184 - 47666139
Alignment:
Q  310 tatttttcagattaattgataaaaataccatcattttcacgtgcct 355  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  47666184 tatttttaagattaattgataaaaataccatcattttcacgtgcct 47666139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 21895655 - 21895714
Alignment:
Q  105 taggcttaattgca-tttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||    
T  21895655 taggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccat 21895714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 42455788 - 42455839
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 156  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  42455788 taggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 20969073 - 20969019
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 3644837 - 3644781
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||||||||||||| |||  ||||  ||||||| |||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 8315137 - 8315083
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 160  Q
    |||||||||||||| ||| |||||||||| |||| |||||||| ||||||||||||    
T  8315137 taggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 10293608 - 10293662
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||||||  |||||||  |||| |||||||| |||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcacccc 10293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 10293963 - 10293909
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 10293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 160  Q
    ||||||||||||  ||||||||||||  |||||||||| || ||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 5e-81; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 15442675 - 15442875
Alignment:
Q  19 agattatgttttaaaattgaaaactttacaccaattaataattttatgaggaaaataaaatttagtagaaagtcttaattaaaaagtaggcttaattgca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15442675 agattatgttttaaaattgaaaactttacaccaattaataattttatgaggaaaataaaatttagtagaaagtcttaattaaaaagtagacttaattgca 15442774  T
Q  119 tttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatgg 218  Q
    ||||||||||||||| || ||||||||||||||||||||||||||  ||| ||||| |||||||||| ||||||  ||||||| |||| |||||||||||    
T  15442775 tttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgtgattttatgg 15442874  T
Q  219 t 219  Q
    |    
T  15442875 t 15442875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 106 - 286
Target Start/End: Complemental strand, 24473823 - 24473643
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  24473823 aggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctt 24473724  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||    
T  24473723 tctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccatgtgtgtaatttca 24473643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 98 - 283
Target Start/End: Original strand, 37396699 - 37396888
Alignment:
Q  98 taaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttt 197  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  37396699 taaaaattaggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttt 37396798  T
Q  198 tccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatc----aattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    |||||||||||||||| |||||||||    
T  37396799 tccccctttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaattaatgtgtgccacgtgtgtaatt 37396888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 96 - 283
Target Start/End: Complemental strand, 6199161 - 6198973
Alignment:
Q  96 attaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagt 195  Q
    |||||||| |||||||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  6199161 attaaaaattaggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagt 6199062  T
Q  196 tttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||||| | ||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||||||    
T  6199061 tttccccctttctgattttatgatccccatgacatttagtgctgaaatgtctgtttttttatcaattaatgtgtgccacatgtgtaatt 6198973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 34498611 - 34498433
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||| |||| || |||| ||||||||||| ||||||||||    
T  34498611 taggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccct 34498512  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  34498511 ttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 34498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 41662520 - 41662698
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||    
T  41662520 aggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccctt 41662619  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||| |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||||||    
T  41662620 tctaattttatggttcccatgacatttagtgctgatgtgtttgtttttttatcaattaatgtgtgccacgtgtgtaatt 41662698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 24473343 - 24473519
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||||||| ||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttccccccttt 24473442  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  24473443 ctgattttatggtccccatgacatttagtgatgacgtgtctgttttttatcaattaacgtgtgccacgtgtgtaatt 24473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 107 - 286
Target Start/End: Original strand, 9623502 - 9623681
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| | | ||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||||||  |||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttcccttttt 9623601  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||| |||| ||| ||||||||||||    
T  9623602 ctgattttatggtccccttgacatttagtgctgatatgtctgttttttatcaattaatatgtgtcacgtgtgtaatttca 9623681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 16169661 - 16169485
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||| |||||||||||  ||||||||  | |||||| |  || |||| ||||||||||||||||||||||||||||| |||||||    
T  16169661 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttccccttt 16169562  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  16169561 ctgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 16169485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 37397199 - 37397031
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttcccccttt 37397100  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  37397099 ctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 37397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 109 - 286
Target Start/End: Original strand, 15444213 - 15444390
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 208  Q
    ||||||||||||||||||| ||||||||||||||||||   ||||| ||  |||| |||| |||||||||||||||| |||||||||||||||||||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  209 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||  |||||||||||||||||||| | |||||| ||||||||||||| |||||||| ||||||||||||    
T  15444313 gattttatggtctccatgacatttagtgctgatatctctgttttttatcaattaatatgtgccacgtgtgtaatttca 15444390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 20861693 - 20861561
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||| |||||||||||    
T  20861693 aggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccctt 20861594  T
Q  206 tctgattttatggttcccatgacatttagtgct 238  Q
    |||||||||||||| ||||||||||||||||||    
T  20861593 tctgattttatggtccccatgacatttagtgct 20861561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 17431286 - 17431419
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||| ||||||||| |||||||| |||||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  17431286 aggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccctt 17431385  T
Q  206 tctgattttatggttcccatgacatttagtgctg 239  Q
    |||||||||||||| |||||||||||||||||||    
T  17431386 tctgattttatggtccccatgacatttagtgctg 17431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 34498125 - 34498288
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||| |||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctatag-tttccccctttctg 34498223  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||||||||||||||||||         | |||||||||||||||||||||| |||||||||    
T  34498224 attttatggtccccatgacatttagtgctga---------tttttatcaattaatgtgtgccacgtgtgtaatt 34498288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 6198656 - 6198827
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| ||| ||| || | ||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||| |    
T  6198656 taggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccat 6198755  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||| |       || |||||||||||||||||||||| |||||||||    
T  6198756 ttctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 6198827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 101 - 283
Target Start/End: Complemental strand, 33727165 - 33726989
Alignment:
Q  101 aaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcc 200  Q
    |||| ||| |||||| || ||||| ||  |||||||||| ||||||| ||||||||||  ||| |||| |||||||||||||||||||||||||||||||    
T  33727165 aaagaaggtttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttcc 33727066  T
Q  201 ccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||| |||||||||||||||||||       | || |||||||||||||||||||||| |||||||||    
T  33727065 ccctttctgattttatggtccccatgacatttagtgctg------gttttttttatcaattaatgtgtgccacgtgtgtaatt 33726989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 15444703 - 15444569
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||| ||||||||| |||| ||||||||| ||| ||||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||||| ||    
T  15444703 taggtttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctct 15444604  T
Q  205 ttctgattttatggttcccatgacatttagtgctg 239  Q
    ||||||||||||||| |||||||||||||||||||    
T  15444603 ttctgattttatggtccccatgacatttagtgctg 15444569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 33726734 - 33726841
Alignment:
Q  176 gcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacat 275  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||    
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaataaatgtgtgtcacat 33726833  T
Q  276 gtgtaatt 283  Q
    ||||||||    
T  33726834 gtgtaatt 33726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 16169174 - 16169342
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||  || ||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||| ||||||||||||||| ||||||    
T  16169174 ggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 16169272  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | | ||||||||| ||||| |       || ||||||||||||||||||||||||||||||||    
T  16169273 ctgattttatggtcctcgtgacatttaatgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 16169342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 25439161 - 25439052
Alignment:
Q  126 cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccat 225  Q
    ||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||    
T  25439161 cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatag-tttccccctttttgattttatggtccccat 25439063  T
Q  226 gacatttagtg 236  Q
    |||||||||||    
T  25439062 gacatttagtg 25439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 2856524 - 2856632
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||  |||||||||||||||||||    
T  2856524 taggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccct 2856623  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  2856624 ttctgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 15311763 - 15311836
Alignment:
Q  23 tatgttttaaaattgaaaactttacaccaattaataattttatgaggaaaataaaatttagtagaaagtcttaa 96  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15311763 tatgttttaaatttgaaaactgtacaccaattaataattttatgaggaaaacaaaatttagtagaaagtcttaa 15311836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 15492132 - 15492205
Alignment:
Q  23 tatgttttaaaattgaaaactttacaccaattaataattttatgaggaaaataaaatttagtagaaagtcttaa 96  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15492132 tatgttttaaatttgaaaactgtacaccaattaataattttatgaggaaaacaaaatttagtagaaagtcttaa 15492205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 9823416 - 9823309
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  9823416 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 9823317  T
Q  206 tctgattt 213  Q
    ||||||||    
T  9823316 tctgattt 9823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 39724102 - 39723996
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 39724003  T
Q  207 ctgattt 213  Q
    |||||||    
T  39724002 ctgattt 39723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 13026633 - 13026741
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| ||||||||||| |||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  13026633 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttccccct 13026732  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  13026733 ttctgattt 13026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 13027332 - 13027229
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 13027233  T
Q  210 attt 213  Q
    ||||    
T  13027232 attt 13027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 15042143 - 15042251
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||| ||||||||| ||| ||||| |||  |||||||||||||||||||||||||| ||||||| ||| |||||||||||| | | ||  ||||||||||    
T  15042143 taggtttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccct 15042242  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  15042243 ttctgattt 15042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 9822748 - 9822854
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  |||  |||||||| |||||||||||||||  ||| |||||||||||||||| || |||  ||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttcccccttt 9822847  T
Q  207 ctgattt 213  Q
    |||||||    
T  9822848 ctgattt 9822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 22851390 - 22851496
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  |||| |||||||| |||||||||||||||  ||| |||| ||||||||||| ||| ||  ||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttcccccttt 22851489  T
Q  207 ctgattt 213  Q
    |||||||    
T  22851490 ctgattt 22851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 25438794 - 25438853
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgttt 168  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttt 25438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 3307338 - 3307444
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||||||||| |||||||  |||| |||||||| ||||||||| |||||  ||| |||| ||||||||||| ||| ||  ||||| ||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctcccttt 3307437  T
Q  207 ctgattt 213  Q
    |||||||    
T  3307438 ctgattt 3307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 247
Target Start/End: Complemental strand, 13937445 - 13937303
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||  |||| |||||||| || ||||||||||||  ||| ||||||| |||||||| ||  ||  ||||||||||    
T  13937445 taggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttccccct 13937346  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtct 247  Q
    ||||| ||| | ||  ||||||   ||||||| ||||||||||    
T  13937345 ttctggtttgaaggcccccatgtgttttagtgatgatgtgtct 13937303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 13936722 - 13936827
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||| |||  ||| ||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||| ||||||    
T  13936722 aggcttaattgcacttttccccc-tatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccat-ctttttcccctt 13936819  T
Q  206 tctgattt 213  Q
    ||||||||    
T  13936820 tctgattt 13936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 39723413 - 39723508
Alignment:
Q  118 atttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattt 213  Q
    ||||||| || ||||  ||||||||||||| ||||||||| |||||  ||| |||||||||||||||| ||| ||  |||||||||||||||||||    
T  39723413 atttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 39723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 41662457 - 41662349
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccctt 205  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||||||||||||| |  |||  |  |||||||||||| ||| ||  |||| |||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 41662358  T
Q  206 tctgatttt 214  Q
    |||||||||    
T  41662357 tctgatttt 41662349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 43246231 - 43246176
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||    
T  43246231 aggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacccc 43246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 12281123 - 12281176
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 159  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  12281123 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 765736 - 765788
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 37752084 - 37752140
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccat 37752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 15156239 - 15156185
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  |||| |||||||| |||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 160  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 247
Target Start/End: Original strand, 6092770 - 6092915
Alignment:
Q  100 aaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc 199  Q
    ||||| |||||||||||||||||  ||||||||  |||| |||||||| ||||||||| |||||  ||| ||  || ||||||||| ||| ||  |||||    
T  6092770 aaaagaaggcttaattgcatttt--ccccctatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttc 6092867  T
Q  200 cccctttctgattttatggttcccatgacatttagtgctgatgtgtct 247  Q
    ||| |||| ||||| | ||  ||||||   ||||||| ||||||||||    
T  6092868 cccttttcagatttaaaggcccccatgtgttttagtgatgatgtgtct 6092915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 9623935 - 9623880
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| |||||  || |||||||||||||| |||||||||||||||||||    
T  9623935 ggcttaattgcacttttcatcc-tatagtttgccaatcgtgtgattttgcaccccat 9623880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 15155881 - 15155937
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  15155881 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 15155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 16928940 - 16928996
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| ||| |||||||||  ||||| ||||||| |||||||||||||    
T  16928940 taggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacccc 16928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 283
Target Start/End: Complemental strand, 9623856 - 9623825
Alignment:
Q  252 tttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||    
T  9623856 tttatcaattaatgtgtgccacatgtgtaatt 9623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 156  Q
    |||||||||| |||| ||||||||||||| ||||||||| ||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 16929296 - 16929242
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| ||||| |||||||  ||||| ||||||| |||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacccc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 37752470 - 37752416
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 37752416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 22786832 - 22786892
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 159  Q
    ||||| |||| ||||||||| |||| ||||||||  ||| | |||||||||||||||||||    
T  22786832 aaaaattaggtttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 23123338 - 23123394
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| ||||||| |||||  |||| |||||||| |||||| ||||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccat 23123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 107 - 286
Target Start/End: Complemental strand, 49318219 - 49318041
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  49318219 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcccccttt 49318121  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49318120 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaatttca 49318041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 44911504 - 44911314
Alignment:
Q  94 taattaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctata 193  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  44911504 taattaaattgtaggtttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctata 44911405  T
Q  194 gttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44911404 gttttcctcctttctgattttatggttctcatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaattt 44911314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 44911023 - 44911201
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44911023 taggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 44911122  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||  ||||||||    
T  44911123 ttctgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatgcgtgccacgagtgtaatt 44911201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 48104681 - 48104854
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  48104781 attttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 48104854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 109 - 286
Target Start/End: Complemental strand, 50526524 - 50526347
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 208  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  209 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  50526424 gattttatggtccacatgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 50526347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 105 - 355
Target Start/End: Complemental strand, 50949621 - 50949370
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    ||||| |||||||| ||| ||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  50949621 taggcataattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccct 50949522  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca-nnnnnnnnnnnnnnnnn 303  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||                      
T  50949521 ttctgattttatggttctcatgacatttagtgctgatgtgtgtgttatttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaa 50949422  T
Q  304 nnntgatatttttcagattaattgataaaaataccatcattttcacgtgcct 355  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50949421 aaatgatatttttcagattaattgataaaaataccatcattttcacgtgcct 50949370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 9347126 - 9347303
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9347225  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | |||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  9347226 ctgattttatggtccgcatgacatttagcgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 9347303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 9347606 - 9347428
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  9347606 taggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 9347508  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtct-gttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||    
T  9347507 ttctgattttatggttcccatgacatttagtgttgatgtgtctatttttttatcaattaatgtgtgccacatgtgtaatt 9347428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 50430132 - 50429958
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 50430033  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  50430032 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 50429958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 21687025 - 21687202
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 21687124  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  21687125 ctgattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 21687202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 50615674 - 50615499
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  50615674 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50615576  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  50615575 ctgattttatggtccccatgacatttagtgctgatgcgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 50615499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 50623502 - 50623327
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  50623502 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50623404  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  50623403 ctgattttatggtccccatgacatttagtgctgatgcgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 50623327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 4692488 - 4692311
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||| || ||||||||||| ||||||    
T  4692488 aggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttcccctt 4692389  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  4692388 tctgattttatggtccccatgacatttagtgctgatgtgtctattttttatcaattaatgtgtgccacgtgtgtaatt 4692311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 107 - 286
Target Start/End: Original strand, 27172116 - 27172291
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27172116 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 27172214  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||| ||||||||||||||||   || |||||||||| |||||||||||||||||||||| ||||||||||||    
T  27172215 ctgattttatgcttcccatgacatttag---tgttgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 27172291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 95 - 283
Target Start/End: Complemental strand, 999590 - 999401
Alignment:
Q  95 aattaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatag 194  Q
    |||| |||| |||||||||||||| ||||||||| ||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  999590 aatttaaaaataggcttaattgcacttttccccc-tatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatag 999492  T
Q  195 ttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||  || |||||||||||||||||||||| |||||||||    
T  999491 ttttccccctttctgattttatggtccccatgacatttagtgctgatgcgtctgttttttttatcaattaatgtgtgccacgtgtgtaatt 999401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 107 - 286
Target Start/End: Complemental strand, 6703948 - 6703769
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||| | |||||||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttcccccttt 6703849  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||    
T  6703848 ctgattttatggtcctcatgacatttagtgctgatatgtctgttttttatcaattaatgtatgccacgtgtgtaatttca 6703769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 28634213 - 28634034
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  28634213 taggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccct 28634114  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||||| |||| |||||||||    
T  28634113 ttctgattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtaccacgtgtgtaatt 28634034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 46824333 - 46824156
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||| || ||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  46824333 aggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 46824234  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    | |||||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||||| ||| |||||||||    
T  46824233 tttgattttatggtccccatgacatttagtgctgaaatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 46824156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 42611188 - 42611363
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||| |||||||||||  || ||||||||||||| |||||||| |||||||||    
T  42611288 attttatggttcccatgacatttagtgttgatgtgtctgttttttttatcaattaatatgtgccacgtgtgtaatt 42611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 104 - 283
Target Start/End: Complemental strand, 32163100 - 32162928
Alignment:
Q  104 gtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccc 203  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  32163100 gtaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccc 32163001  T
Q  204 tttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||| |||||||||||||||||||||       || ||||||||||||||||| |||| |||||||||    
T  32163000 tttctgattttatggtccccatgacatttagtgctgat-------ttttttatcaattaatgtgttccacgtgtgtaatt 32162928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 49318496 - 49318323
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||||||||| ||||| |||| ||||||||||||||  ||||||||||||||||  |||    
T  49318496 ggcttaattgcatttttccccc-tatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctatagttttccc--ttt 49318400  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  49318399 ctgattttatggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacatatgtaatt 49318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 4692022 - 4692196
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||| | || ||||||||||| ||||||  ||||||||| || || ||||||||||||| ||||||||||||||||||| ||||||||    
T  4692022 ggcttaattgcacttt-ctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctatagttt-cccccttt 4692119  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4692120 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaatt 4692196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 28633718 - 28633889
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||||||| |||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  28633718 taggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 28633817  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||| |       || |||||||||||||||||||||| |||||||||    
T  28633818 ttctgattttatggttcccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 28633889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 107 - 279
Target Start/End: Original strand, 13918446 - 13918618
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| || |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13918545  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgt 279  Q
    |||||||||||||  | ||||||||||||| | || |||||||| ||||||||||||||||| |||| |||||    
T  13918546 ctgattttatggtcactatgacatttagtgtttatatgtctgttttttatcaattaatgtgtaccacgtgtgt 13918618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 42611665 - 42611491
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||| ||||||||||||| |||||||| ||||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctg 42611566  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  42611565 attttatggtccccataacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgcaatt 42611491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 49317752 - 49317927
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||| |||||||||||||||||||  |||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  49317752 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttcccccttt 49317850  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||| || ||| |||||||||    
T  49317851 ctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgt-tgtcacgtgtgtaatt 49317927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 46823846 - 46824011
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| |||||||||||||||| |||        || |||||||||||||||||||||| |||||||||    
T  46823946 attttatggtacccatgacatttagtgttga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 46824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 48105170 - 48105001
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48105071  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||| ||||||||||| |       || |||||||||||||| ||||||| |||||||||    
T  48105070 ctgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgcgtgccacgtgtgtaatt 48105001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 999115 - 999286
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||| || ||||||    
T  999115 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttctcc-tttctg 999212  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||  ||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||||    
T  999213 attttatggtctccatgacatttagtgttaatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 999286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 106 - 247
Target Start/End: Original strand, 20480167 - 20480307
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  20480167 aggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 20480265  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtct 247  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  20480266 tctgattttatggtccccatgacatttagtgctgatatgtct 20480307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 26814694 - 26814862
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 26814793  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||         | || |||||||||||||||||||||| |||||||||    
T  26814794 ctgattttatggtccccatgacatttagtgc--------gttttttttatcaattaatgtgtgccacgtgtgtaatt 26814862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 44224148 - 44223994
Alignment:
Q  132 tagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatt 231  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |  ||||||||    
T  44224148 tagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctgattttatggtccttatgacatt 44224049  T
Q  232 tagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  44224048 tagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 44223994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 279
Target Start/End: Complemental strand, 21687520 - 21687348
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||| ||| ||||||||| |||| ||||||||||||| ||||||| ||| ||| |||| |||||||||||||| ||| || |||||||||||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttcccccttt 21687422  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgt 279  Q
    ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||    
T  21687421 ctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgt 21687348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 106 - 269
Target Start/End: Original strand, 20371039 - 20371199
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||  |||||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||    
T  20371039 aggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagtttt-cccctt 20371135  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 269  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||    
T  20371136 tctgattttatggtccctatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 20371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 50429655 - 50429833
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||| | ||||||||  |||| ||||| ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||  ||||    
T  50429655 aggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatcctt 50429754  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||||||||||||||  || |||||||||||| ||||||||| |||||||||    
T  50429755 tctgattttatgg-tcccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgccacgtgtgtaatt 50429833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 99 - 283
Target Start/End: Complemental strand, 26815181 - 26815006
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt 198  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  26815181 aaaatgtaggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataatttt 26815082  T
Q  199 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||| ||||||| |||||||||    ||     || |||||||||||||||||||||| |||||||||    
T  26815081 ccccctttctgattttatggtccccatgatatttagtgc----gt-----ttttttatcaattaatgtgtgccacgtgtgtaatt 26815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 27172596 - 27172427
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  27172596 aggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg-cccctatagttttccccctt 27172498  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||| |       || ||||||||||||||| |||||| |||||||||    
T  27172497 tctgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtctgccacgtgtgtaatt 27172427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 6703458 - 6703627
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||| || |||||||||| ||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |    
T  6703458 taggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccctt 6703557  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  6703558 ttctgattttatggtccccatgacatttagtgctg--------gtt-tttatcaattaatgtgtgccacgtgtgtaatt 6703627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 13918920 - 13918751
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||| ||     
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttt 13918821  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| |||||||||||||||||||       | || |||||||||||||||||| ||| |||||||||    
T  13918820 tgattttatggtccccatgacatttagtgctg------tttttttttatcaattaatgtgtgtcacgtgtgtaatt 13918751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 20371406 - 20371272
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| || |||| |||||||| ||||||||||||||||||| |||||||    
T  20371406 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 20371308  T
Q  206 tctgattttatggttcccatgacatttagtgctgat 241  Q
    |||||||||||||| ||||||||||||| |||||||    
T  20371307 tctgattttatggtccccatgacatttaatgctgat 20371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 250
Target Start/End: Complemental strand, 19008806 - 19008661
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||||||||| || ||||||||||||||| ||||||||||    
T  19008806 taggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccct 19008707  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgtt 250  Q
    ||||||||| ||||| ||| |  ||| | | |||||||||||||||    
T  19008706 ttctgatttgatggtaccccttgcatctggcgctgatgtgtctgtt 19008661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 20480665 - 20480534
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||||||||||| || |||| |||||||||||||  ||||||||||| || |||||||    
T  20480665 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt--ccccctatagtgtttccccttt 20480569  T
Q  207 ctgattttatggttcccatgacatttagtgctgat 241  Q
    ||||||||||||| ||||||||||||| |||||||    
T  20480568 ctgattttatggtccccatgacatttaatgctgat 20480534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 47498301 - 47498433
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||  |||||||||||||||||||||||  |||||||| ||||| |||| |||| ||||||||||||| ||||||||||| ||||||    
T  47498301 ggcttaattgcacttt--ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctatagttttctcccttt 47498398  T
Q  207 ctgattttatggttcccatgacatttagtgctgat 241  Q
     ||||||||||||  ||||||||||||||||||||    
T  47498399 ttgattttatggtctccatgacatttagtgctgat 47498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 50949164 - 50949317
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||| | ||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||                    ||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgattttaccc--------------------tg 50949243  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  50949244 attttatggttctcatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 50949317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 39692055 - 39691942
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||  ||| ||||| | |||||||| ||||||  |||||||||||    
T  39692055 aggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttccccctt 39691956  T
Q  206 tctgattttatggt 219  Q
    ||||||||||||||    
T  39691955 tctgattttatggt 39691942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 50615289 - 50615373
Alignment:
Q  199 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  50615289 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaatt 50615373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 50623117 - 50623201
Alignment:
Q  199 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  50623117 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaatt 50623201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 49284408 - 49284515
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  49284408 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 49284507  T
Q  206 tctgattt 213  Q
    ||||||||    
T  49284508 tctgattt 49284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 6002237 - 6002343
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  |||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6002336  T
Q  207 ctgattt 213  Q
    |||||||    
T  6002337 ctgattt 6002343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 32162750 - 32162866
Alignment:
Q  128 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 227  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||| ||     ||||||||||||| |||||||||||||||||||| |||||||    
T  32162750 cctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc-at-----cccctatagtttttcccctttctgattttatggtccccatga 32162843  T
Q  228 catttagtgctgatgtgtctgtt 250  Q
    |||||| ||||||| ||| ||||    
T  32162844 catttaatgctgatatgtttgtt 32162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 44223747 - 44223854
Alignment:
Q  170 aaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 269  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||        ||| |||||||||||||| |||    
T  44223747 aaacgagcgattttgccccctatagtttttcccctttctgattttatgg-tctcatgacatttagtgctg--------gttttttatcaattaatgcgtg 44223837  T
Q  270 ccacatgtgtaatttca 286  Q
    |||  ||||||||||||    
T  44223838 ccatgtgtgtaatttca 44223854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 33085670 - 33085780
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||| | |||||| ||||||| |||| ||||||| ||||||||||||||| ||||| |||||| ||||||||| ||  ||  |||||| ||||    
T  33085670 aggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccca-tgttt-aaacgaacgattttgcacctcatccttttcctcctt 33085767  T
Q  206 tctgattttatgg 218  Q
    |||||||||||||    
T  33085768 tctgattttatgg 33085780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 49285081 - 49285003
Alignment:
Q  135 tttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattt 213  Q
    ||||||||||||| |||||||||||||||  ||| |||| ||||||||||| ||| ||  |||||||||||||||||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgattt 49285003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 8109048 - 8108991
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||    
T  8109048 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 44911287 - 44911242
Alignment:
Q  310 tatttttcagattaattgataaaaataccatcattttcacgtgcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44911287 tatttttcagattaattaataaaaataccatcattttcacgtgcct 44911242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 6002946 - 6002842
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 208  Q
    |||||||||| |||||  ||||||  |||  |||||||| |||||||||||||||  ||| |||||||||||||||| ||  ||  ||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttct 6002847  T
Q  209 gattt 213  Q
    |||||    
T  6002846 gattt 6002842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 47955305 - 47955360
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  47955305 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 19007774 - 19007848
Alignment:
Q  176 gcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgtt 250  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| |  ||| | | |||||||||||||||    
T  19007774 gcgattttgccccctatagttttccctctttctgatttgatggtcccccttgcatctggcgctgatgtgtctgtt 19007848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 50615239 - 50615289
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 156  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  50615239 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 50623067 - 50623117
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 156  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  50623067 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 6712215 - 6712279
Alignment:
Q  152 tttgcaccccattgtttaaaacgagcgatttt-gccccctatagttttccccctttctgatttta 215  Q
    |||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||  |||||||    
T  6712215 tttgcaccccatagttttaaacgagcgattttatccccctatagttttcccccttttcgatttta 6712279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 48190771 - 48190827
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 48190827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 48191417 - 48191353
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||| |||||||||||||| ||||| |||||||  ||||||||| ||| |||||||||||||||    
T  48191417 aaaaaataggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccat 48191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 19007721 - 19007783
Alignment:
Q  93 ttaattaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgc 156  Q
    ||||| |||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  19007721 ttaataaaaaaaaaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 47955669 - 47955608
Alignment:
Q  100 aaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||||||||| |||||||||||||  |||   ||||||| |||||||||||||    
T  47955669 aaaagtaggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 47955608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 39690792 - 39690847
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 160  Q
    |||||||| ||||| |||| ||||||||| || |||||||||| ||||||||||||    
T  39690792 taggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 47498547 - 47498493
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||||||||| ||||||||| ||||||||| |||||||| | |||||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 159  Q
    ||||||||| |||||||||||||  ||||| ||||||| |||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 17518653 - 17518602
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||| ||||||||| |||  ||||||||||||| |||||||||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 1e-78; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 106 - 286
Target Start/End: Original strand, 26207360 - 26207539
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26207360 aggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctt 26207458  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  26207459 tctgattttatggttcccatgacatttaatgctgatgtgtttgttatttatcaattaatgtgtgccacgtgtgtaatttca 26207539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 107 - 286
Target Start/End: Complemental strand, 169493 - 169314
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 169394  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
     |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  169393 ttgattttatggtccccatgacatttagtgttgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 169314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 106 - 265
Target Start/End: Complemental strand, 26207801 - 26207642
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26207801 aggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctt 26207702  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatg 265  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  26207701 tctgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatg 26207642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 105 - 284
Target Start/End: Original strand, 28196344 - 28196523
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  28196344 taggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 28196443  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  28196444 ttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaattt 28196523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 28196828 - 28196650
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  28196828 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 28196729  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  28196728 tctgattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 28196650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 32703704 - 32703527
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccctttt 32703605  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  32703604 ctgattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacatgtgtaatt 32703527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 23539839 - 23540015
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||| |||    
T  23539839 taggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcct 23539936  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23539937 ttctgattttatggttcccatgacatttagtgctgatgtgtctattatttatcaattaatgtgtgccacgtgtgtaatt 23540015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 105 - 286
Target Start/End: Original strand, 9023242 - 9023423
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  9023242 taggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttccccct 9023341  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    || |||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  9023342 ttatgattttatggtccccatgacatttaatgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 9023423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 106 - 284
Target Start/End: Original strand, 32703224 - 32703402
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  32703224 aggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctt 32703323  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  32703324 tctgattttatggtccccgtgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattt 32703402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 9380307 - 9380483
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | |||||||||||||  |||| |||||||| |||||||||||||||||||||| |||||||||    
T  9380407 ctgattttatggtcctcatgacatttagtattgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 9380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 39744521 - 39744342
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  39744521 taggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 39744422  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| |||| ||||||||||||||||||||| |||||| || |||||||||||||||||| ||| |||||||||    
T  39744421 ttctgattttgtggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 39744342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 292780 - 292958
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||  |||||||| | ||| |||| |||||||||||||||||||||| ||||||||||||    
T  292780 taggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttccccct 292879  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||||    
T  292880 ttctgattttatggtccccatgacatttagtgctgatatgtctgttttttattaattaatgtgtgccacgtgtgtaatt 292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 125 - 283
Target Start/End: Complemental strand, 25162349 - 25162191
Alignment:
Q  125 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 224  Q
    ||||||||| |||| ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25162349 ccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtcccca 25162250  T
Q  225 tgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  25162249 tgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 25162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 23540306 - 23540130
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| ||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttcccccttt 23540207  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||||| ||| |||||||||    
T  23540206 ctgattttatggtccccatgacatttagtgctgatgtgtgtgttttttattaattaatgtgtgtcacgtgtgtaatt 23540130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 102 - 286
Target Start/End: Complemental strand, 43292416 - 43292234
Alignment:
Q  102 aagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccc 201  Q
    |||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||    
T  43292416 aagttggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-cc 43292318  T
Q  202 cctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||||||| || || ||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  43292317 cctttctgattttat-gtcccaatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatttca 43292234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 169012 - 169191
Alignment:
Q  106 aggcttaattgcatttttc-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||||| |||||    
T  169012 aggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccct 169111  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||| | ||| |||||||||    
T  169112 ttctgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgagtcacgtgtgtaatt 169191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 121 - 284
Target Start/End: Complemental strand, 48406425 - 48406262
Alignment:
Q  121 tttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggtt 220  Q
    ||||||||||||| ||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtc 48406326  T
Q  221 cccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||||||||| ||| ||||||    
T  48406325 cccatgacatttaatgcttatgtgtctgttttttatcaattaatgtgtgccacgtgtataattt 48406262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 48405961 - 48406138
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||| |||||||||||||||| ||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  48405961 aggcttaattgcacttttcccc-ctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctt 48406059  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||| |||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  48406060 tctgactttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 48406138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 9380797 - 9380627
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  9380797 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccct 9380698  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||||||||||||||        ||| |||||| ||||||||||||||| |||||||||    
T  9380697 ttctgattttatggtccccatgacatttagtgctg--------gttttttatccattaatgtgtgccacttgtgtaatt 9380627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 39086677 - 39086499
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| ||| |||||||||||||||||| |||||||||||  || |||| |||||||||||||||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttcccccttt 39086578  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||   ||||||||||||||||||||||||||  || ||||||||||||||||||| || |||||||||    
T  39086577 ctgattttatggtctgcatgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgctacgtgtgtaatt 39086499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 25161879 - 25162047
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||| |||||| ||||||||||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  25161979 tgattgtatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 25162047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 4239420 - 4239277
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttcccccttt 4239321  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgtt 250  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||    
T  4239320 ctgattttatggtccccatgacatttagtgttgatatgtctgtt 4239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 293272 - 293102
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  293272 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccctt 293173  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||  ||||||| ||||||||||| |       || ||||||||||||||||||||||||||||||||    
T  293172 tctgattttatggcccccatgaaatttagtgctggt-------ttttttatcaattaatgtgtgccacatgtgtaatt 293102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 96 - 283
Target Start/End: Complemental strand, 9023745 - 9023565
Alignment:
Q  96 attaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagt 195  Q
    ||||||||  ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  9023745 attaaaaacaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagt 9023646  T
Q  196 tttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||||||| ||||| | |||||||| || |       || ||||||||||||| |||||||| |||||||||    
T  9023645 tttccccctttctgattttatggtccccatcagatttagtgttggt-------ttttttatcaattaatatgtgccacgtgtgtaatt 9023565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 39744016 - 39744198
Alignment:
Q  93 ttaattaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctat 192  Q
    |||| |||||| |||||||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||||  ||| |||||||||||||||||||||||    
T  39744016 ttaaataaaaattaggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctat 39744115  T
Q  193 agttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  39744116 agttttccccctttctgattttatggtccccgtgatgtttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 39744198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 43292038 - 43292168
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||||  ||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 43292137  T
Q  208 tgattttatggttcccatgacatttagtgct 238  Q
    |||||||||||| | ||||||||||||||||    
T  43292138 tgattttatggtcctcatgacatttagtgct 43292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 129 - 284
Target Start/End: Complemental strand, 39912519 - 39912364
Alignment:
Q  129 ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgac 228  Q
    |||||||||  |||||||| ||||||||| ||||| |||| ||||||| ||||||||| ||||||||||| | ||||| ||||||||| || ||||||||    
T  39912519 ctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcgcctttatgattttatagtccccatgac 39912420  T
Q  229 atttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||    
T  39912419 atttagtgctgatatgtccgttttttatcaattaatgtgtgccacgtgtgtaattt 39912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 283
Target Start/End: Complemental strand, 12758237 - 12758089
Alignment:
Q  128 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 227  Q
    ||||||||||||||||| |||| |||||||| |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||    
T  12758237 cctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctgattttatggtccctatga 12758138  T
Q  228 catttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||  |       || |||||||||||||||||||||| |||||||||    
T  12758137 catttagtgctagt-------ttttttatcaattaatgtgtgccacgtgtgtaatt 12758089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 44468959 - 44468849
Alignment:
Q  125 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 224  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||| | |||||    
T  44468959 ccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttat-gatccca 44468861  T
Q  225 tgacatttagtg 236  Q
    ||||||||||||    
T  44468860 tgacatttagtg 44468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 129 - 283
Target Start/End: Original strand, 12757788 - 12757943
Alignment:
Q  129 ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgac 228  Q
    |||||||||| |||||||| ||||||||| | ||| |||| ||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||||     
T  12757788 ctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattttatggtccccatgat 12757887  T
Q  229 atttagtgctgatgtgt-ctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | |  | || |||||||||||||||||| ||| |||||||||    
T  12757888 atttagtgctgatatctgtttttttttatcaattaatgtgtggcacgtgtgtaatt 12757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 106 - 286
Target Start/End: Original strand, 39912053 - 39912223
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||| |||||||||||   ||||||| |||||| || || || |||| |||||| |||||||||||| ||||||||||||||||    
T  39912053 aggcttaattgcacttttcctccctatagtttattaattgtgcgattttacatcc-atagttttaaacgaacgattttgcccc-tatagttttccccctt 39912150  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||| ||||| | |||||||| ||        ||| |||||||||||||||||||||| ||||||||||||    
T  39912151 tctgattttatggtccccatcagatttagtgttg--------gttttttatcaattaatgtgtgccacgtgtgtaatttca 39912223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 43051307 - 43051200
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||| |||    
T  43051307 aggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctt 43051208  T
Q  206 tctgattt 213  Q
    ||||||||    
T  43051207 tctgattt 43051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 50678777 - 50678885
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  50678777 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 50678876  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  50678877 ttctgattt 50678885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 36095816 - 36095922
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||||||  |||| ||||||    
T  36095816 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat-ctttttcccctt 36095914  T
Q  206 tctgattt 213  Q
    ||||||||    
T  36095915 tctgattt 36095922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 50679478 - 50679372
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  ||||||||||||  |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 50679379  T
Q  207 ctgattt 213  Q
    |||||||    
T  50679378 ctgattt 50679372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 36096526 - 36096423
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||| ||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctg 36096427  T
Q  210 attt 213  Q
    ||||    
T  36096426 attt 36096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 56505691 - 56505795
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||  ||| ||  |||| ||||||| ||| ||  ||||||||||    
T  56505691 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 56505790  T
Q  205 ttctg 209  Q
    |||||    
T  56505791 ttctg 56505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 43050610 - 43050713
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||  ||||||  ||| ||||||||| |||||||||||||||  ||| ||||||| |||||||| ||| ||  |||||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccctttctg 43050709  T
Q  210 attt 213  Q
    ||||    
T  43050710 attt 43050713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 26207565 - 26207610
Alignment:
Q  310 tatttttcagattaattgataaaaataccatcattttcacgtgcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  26207565 tatttttcagattaattaataaaaataccatcattttcacgtgcct 26207610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 11529169 - 11529246
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgc 185  Q
    ||||||||||| |||||| |||||   |||||||||||||||||||||||||||||  ||| || || ||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgc 11529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 45830252 - 45830145
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||| ||| ||||| |||||||  |||| |||||||| |||||| ||||||||  ||| ||| |||||||||||| ||| ||  |||| |||||    
T  45830252 taggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccat-ctttttcccct 45830154  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  45830153 ttctgattt 45830145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 56506630 - 56506522
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| ||| |||  |||||||||||||  |||||| || ||||  ||| ||  |||||||||||| ||| ||  ||||||||||    
T  56506630 taggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttccccct 56506531  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  56506530 ttctgattt 56506522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 16555871 - 16555762
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccctt 205  Q
    |||||||||||| ||||||||| |||  ||||| ||||||| |||||||||||||||  |||     |||||||||||| ||| ||  |||| |||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 16555772  T
Q  206 tctgatttta 215  Q
    ||||||||||    
T  16555771 tctgatttta 16555762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 24775838 - 24775781
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||||||||||| ||||||| |||||  |||| |||||||| |||||||||||||||    
T  24775838 aggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccat 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 13198961 - 13198906
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  13198961 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 13198906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 18077257 - 18077202
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| ||||| |||||||  ||||| ||||||| |||||||||||||    
T  18077257 aggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacccc 18077202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  108 gcttaattgcatttttcccccctatagttt-gccaattgtgtgattttgcacccc 161  Q
    ||||||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 11241716 - 11241659
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| | ||||||||| |||  ||||||||||||| |||||||||||||||    
T  11241716 taggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcaccccat 11241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 49178866 - 49178816
Alignment:
Q  111 taattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||| ||||| |||||||  ||||||||||||| |||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacccc 49178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 54508814 - 54508868
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 160  Q
    ||||||||||||| |||| || || ||  ||||||||||||||||||||||||||    
T  54508814 aggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 3930536 - 3930480
Alignment:
Q  104 gtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||||| ||||||||| |||  ||||| ||||||| |||||||||||||    
T  3930536 gtaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 3930480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 16555513 - 16555569
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| ||||||||| |||  ||||  ||||||| |||||||||||||    
T  16555513 taggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 16555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 95 - 286
Target Start/End: Complemental strand, 12498994 - 12498800
Alignment:
Q  95 aattaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatag 194  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||    
T  12498994 aattaaaaattaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatag 12498895  T
Q  195 ttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg---ttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||   || |||||||||||||||||||||| ||||||||||||    
T  12498894 ttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttttatcaattaatgtgtgccacgtgtgtaatttca 12498800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 26571220 - 26571043
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||    
T  26571220 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcct 26571121  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  26571120 ttctgattttatggtccccatgacatttagtgctgatatgtctgtt-tttatcaattaatgtgtgtcacgtgtgtaatt 26571043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 105 - 273
Target Start/End: Original strand, 12498565 - 12498733
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  12498565 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 12498664  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgt-tatttatcaattaatgtgtgccac 273  Q
    |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12498665 ttctgattttatggtt-ccatgacatttagtgctgatgtgtctgtctttttatcaattaatgtgtgccac 12498733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 110 - 284
Target Start/End: Complemental strand, 3888713 - 3888539
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||| | |||| ||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3888613 attttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacatgtgtaattt 3888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 19514525 - 19514703
Alignment:
Q  107 ggcttaattgcatttttcccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 19514624  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatt-tatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||    
T  19514625 tctgattttatggtccccatgacatttagtgctgatatgtctgtttttgtatcaattaatgtgtgccacgtgtgtaatt 19514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 3888239 - 3888415
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 3888338  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  3888339 ctgattttatgg-tcccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 3888415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 22729492 - 22729318
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| || ||||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||    
T  22729393 tgattttatggtccctatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 22729318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 97 - 283
Target Start/End: Original strand, 2817139 - 2817325
Alignment:
Q  97 ttaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtt 196  Q
    |||||||  ||| ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||  ||| |||||||||||||||||||||||| ||    
T  2817139 ttaaaaaaaaggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctata-tt 2817237  T
Q  197 ttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||    
T  2817238 tttcccctttctgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 2817325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 106 - 286
Target Start/End: Complemental strand, 19515018 - 19514845
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||    
T  19515018 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccctt 19514919  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||||||||||||||||||||||| |       || |||||||||||||||||| ||| ||||||||||||    
T  19514918 tctgattttatggttcccatgacatttagtgctggt-------ttttttatcaattaatgtgtgacacgtgtgtaatttca 19514845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 21207229 - 21207395
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||||||||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  21207329 attttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 21207395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 128 - 283
Target Start/End: Complemental strand, 41072247 - 41072092
Alignment:
Q  128 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 227  Q
    ||||||||||| |||||||  |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  41072247 cctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccatga 41072148  T
Q  228 catttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||    
T  41072147 catttagtgctgatgtgtctgttttttatcgattaatgtgtgtcacgtgtgtaatt 41072092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 106 - 284
Target Start/End: Complemental strand, 34147565 - 34147389
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||| |||||||||||||| |||||||| ||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||    
T  34147565 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccctt 34147466  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    |||||||||||||| ||| ||||||||||   ||||||||||| || |||||||||||||||||| ||| ||||||||||    
T  34147465 tctgattttatggtccccgtgacatttag---tgatgtgtctgtttttttatcaattaatgtgtgtcacgtgtgtaattt 34147389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 43464247 - 43464078
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  43464247 taggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccct 43464149  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  43464148 ttctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 43464078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 105 - 286
Target Start/End: Original strand, 26570727 - 26570900
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    ||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  26570727 taggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccct 26570826  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    ||||||||||||||| |||||||||||||| ||||        ||| |||||||||||||||||||||| | ||||||||||    
T  26570827 ttctgattttatggtccccatgacatttagcgctg--------gttttttatcaattaatgtgtgccacgtttgtaatttca 26570900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 34147140 - 34147316
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||   ||||||||  |||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  34147140 aggcttaattgcacttttccct--tatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctt 34147237  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| || |||||||||||||||||| ||| |||||||||    
T  34147238 tctgattttatggtccccgtgacatttagtgctgatgtatctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 34147316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 100 - 286
Target Start/End: Complemental strand, 11317035 - 11316857
Alignment:
Q  100 aaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc 199  Q
    ||||| ||| ||||||||| ||||  || || || ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  11317035 aaaagaaggtttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttc 11316936  T
Q  200 cccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    || ||||||||||||||||| |||||||||||||||||||        ||| ||||||||||||||| |||||| ||||||||||||    
T  11316935 cctctttctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtctgccacgtgtgtaatttca 11316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 37780796 - 37780631
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||| | |||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg-cccctatag-tttcccccttt 37780699  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||||||||||||||||         | |||||||||||||||||||||| |||||||||    
T  37780698 ctgattttatggtccccatgacatttagtgctga---------tttttatcaattaatgtgtgccacgtgtgtaatt 37780631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 37610201 - 37610367
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||        
T  37610201 aggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccc---- 37610295  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
          |||||||| ||||| |||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||    
T  37610296 ------tttatggtccccataacatttagtgttgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 37610367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 283
Target Start/End: Complemental strand, 37610658 - 37610506
Alignment:
Q  121 tttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggtt 220  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  37610658 tttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtc 37610560  T
Q  221 cccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||| ||        ||| |||||||||||||||||||||| |||||||||    
T  37610559 cccatgacatttagtgttg--------gtt-tttatcaattaatgtgtgccacgtgtgtaatt 37610506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 37780319 - 37780486
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||        
T  37780319 aggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc---- 37780413  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
          |||||||| ||||| |||||||||| |||| |||||| || |||||||||||||||||| ||| |||||||||    
T  37780414 ------tttatggtccccataacatttagtgttgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 37780486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 106 - 226
Target Start/End: Original strand, 25940520 - 25940640
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||||  ||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||| |||||    
T  25940520 aggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccctt 25940619  T
Q  206 tctgattttatggttcccatg 226  Q
    |||||||||||||| ||||||    
T  25940620 tctgattttatggtccccatg 25940640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 109 - 283
Target Start/End: Complemental strand, 2817626 - 2817454
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 208  Q
    |||||||||| ||||||||| |||||||||| ||||||| |||||| || || || |||| |||||||||||||||| ||||||| ||| || |||| ||    
T  2817626 cttaattgcacttttccccc-tatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctataatttccctcctt-ct 2817529  T
Q  209 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
     |||||||||| ||||||||||||||| ||||||||| |||| || ||||||||||||||||||| |||||||||    
T  2817528 aattttatggtccccatgacatttagtactgatgtgtttgtttttcatcaattaatgtgtgccacgtgtgtaatt 2817454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 22729002 - 22729138
Alignment:
Q  101 aaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcc 200  Q
    ||||| |||||||||||| ||||||||| |||||||||  ||||||| ||||||||||  ||| |||| ||||||||||||||||||| |||||||||||    
T  22729002 aaagttggcttaattgcacttttccccc-tatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc-tatagttttcc 22729099  T
Q  201 ccctttctgattttatggttcccatgacatttagtgctg 239  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  22729100 ccctttctgattttatggtccccatgacatttagtgctg 22729138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 10098996 - 10098861
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||| ||||||||| |||||| || ||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||||| ||    
T  10098996 taggtttaattgcacttttcctcc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctct 10098898  T
Q  205 ttctgattttatggttcccatgacatttagtgctgat 241  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  10098897 ttctgattttatggtccccatgacatttagtactgat 10098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 43463759 - 43463932
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||  |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  43463759 ttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 43463857  T
Q  210 ---------attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
             |||||||||| |||||||||||||||||||        ||| |||||||||||||||||||||| |||||||||    
T  43463858 attttaattattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgccacgtgtgtaatt 43463932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 25940955 - 25940842
Alignment:
Q  171 aacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||| || || ||||||||||||||||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctgatatgtttgtttttttatcaattaatgtgtg 25940856  T
Q  270 ccacatgtgtaatt 283  Q
     ||| |||||||||    
T  25940855 tcacgtgtgtaatt 25940842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 10098519 - 10098681
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| || ||||||||||| |||||||| ||||||||| || || |||| |||||||||||||||||||              ||||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgcccc--------------cttt 10098604  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||    
T  10098605 ctgattttatggtccccatgacatttagtgatgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 10098681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 30401885 - 30402053
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||| | ||||||||||||||||||   |||||||| ||||| |||| |||| ||||||||||||||||||| |||| ||||||| ||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctataatttt-cccctttatg 30401983  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| ||||||| |||||||| ||    || | || |||||||||||||||||| ||| |||||||||    
T  30401984 attttatggtccccatgatatttagtgttg----gttttttttttatcaattaatgtgtgtcacgtgtgtaatt 30402053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 25941067 - 25940956
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttc-ccccttt 206  Q
    ||||||||||| ||||||| |||||||||||  |||| || ||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccccttt 25940968  T
Q  207 ctgattttatgg 218  Q
    ||||||||||||    
T  25940967 ctgattttatgg 25940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 18816950 - 18817058
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| ||||||||||||||||  || ||  ||||||||||    
T  18816950 taggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttccccct 18817049  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  18817050 ttctgattt 18817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 18817665 - 18817559
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 18817566  T
Q  207 ctgattt 213  Q
    |||||||    
T  18817565 ctgattt 18817559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 11316717 - 11316812
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||| ||||||| |||||||||||||||||||   |||||||| || ||  ||| |||||||| |||||||||||||||||||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttccccctt 11316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 11350807 - 11350913
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||||| |||||||  |||||||||||||  ||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  11350807 aggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctt 11350905  T
Q  206 tctgattt 213  Q
    | ||||||    
T  11350906 tttgattt 11350913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 42919323 - 42919420
Alignment:
Q  126 cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccc 223  Q
    |||||||| ||| ||||||||| |||||| |||| |||  ||| |||||||||||||||| ||||||  |||| ||||||||||||||||||||||||    
T  42919323 cccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccctttctgattttatggttccc 42919420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 25115755 - 25115865
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccc 203  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || |||     |||||||||||| ||| ||  |||| |||||    
T  25115755 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccc 25115854  T
Q  204 tttctgatttt 214  Q
    |||||||||||    
T  25115855 tttctgatttt 25115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 25174847 - 25174957
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt-ccccc 203  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || |||     |||||||||||| ||| ||  |||| |||||    
T  25174847 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccc 25174946  T
Q  204 tttctgatttt 214  Q
    |||||||||||    
T  25174947 tttctgatttt 25174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 213
Target Start/End: Complemental strand, 11351485 - 11351376
Alignment:
Q  103 agtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccc 202  Q
    |||||| ||||||||| ||||| | |||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||| | ||| ||  ||||||||    
T  11351485 agtaggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccat-cttttcccc 11351387  T
Q  203 ctttctgattt 213  Q
    |||| ||||||    
T  11351386 ctttatgattt 11351376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 16466798 - 16466746
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgca 157  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  16466798 taggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 18433015 - 18433071
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 18433071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 22429251 - 22429194
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  22429251 taggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcaccccat 22429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 26020449 - 26020506
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||||||||||| |||||| ||||||  ||||| ||||||| |||||||||||||||    
T  26020449 aggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccat 26020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 25116117 - 25116061
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  25116117 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 25175207 - 25175151
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  25175207 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25175151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 33324894 - 33324838
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| ||||  |||||||  |||| ||||||||||||||||||||||    
T  33324894 taggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 18433371 - 18433316
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  18433371 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 22428932 - 22428989
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||||| ||| |||||||||  ||||| ||||||| |||||||||||||||    
T  22428932 taggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccat 22428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 34577217 - 34577162
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| |||| |||| |||  ||||| |||||||||||||||||||||||    
T  34577217 ggcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcaccccat 34577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 5e-75; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 110 - 284
Target Start/End: Original strand, 41790494 - 41790667
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41790494 ttaattgcatttttcccc-ctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 41790592  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41790593 attttatggttctcatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaattt 41790667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 110 - 286
Target Start/End: Complemental strand, 26692871 - 26692695
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26692772  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  26692771 attttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttca 26692695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 41790968 - 41790790
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  41790968 taggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctct 41790869  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||  ||||||||    
T  41790868 ttctgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatgcgtgccacgagtgtaatt 41790790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 8851151 - 8851324
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||||    
T  8851251 attttatggtccccatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 125 - 283
Target Start/End: Complemental strand, 19141885 - 19141727
Alignment:
Q  125 ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 224  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19141885 ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttccca 19141786  T
Q  225 tgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||    
T  19141785 tgacatttagtgctgatgtgtttattatttatcaattaatatgtgccacgtgtgtaatt 19141727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 110 - 284
Target Start/End: Original strand, 26692399 - 26692573
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||| ||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| ||||||| |||| ||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaattt 284  Q
    |||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26692499 attttatggtccccaagacatttattgctgatgtgtctgttttttatcaattaatgtgtgccacatgtgtaattt 26692573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 130 - 283
Target Start/End: Complemental strand, 17851433 - 17851282
Alignment:
Q  130 tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgaca 229  Q
    |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17851433 tatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgg-tcccatgaca 17851335  T
Q  230 tttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  17851334 tttagtgctgatatgtctgtt-tttatcaattaatgtgtgccacgtgtgtaatt 17851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 16910827 - 16911005
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||| | |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctccttt 16910926  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg--ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||| |||| ||||||  || |||||||||||||||||||||| ||| |||||    
T  16910927 ctgattttatggtccccatgacatttagtgttgatatgtctgttttttttatcaattaatgtgtgccacgtgtttaatt 16911005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 8851637 - 8851469
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  8851637 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt-cccctt 8851539  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||||||||||||||||        || |||||||||||||||||||||| |||||||||    
T  8851538 tctgattttatggtccccatgacatttagtgctga--------ttttttatcaattaatgtgtgccacgtgtgtaatt 8851469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 7664727 - 7664559
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 7664628  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| |||||||||||||||||         | || |||||||||||||||||||||| |||||||||    
T  7664627 ctgattttatggtccccatgacatttagtgc--------gttttttttatcaattaatgtgtgccacgtgtgtaatt 7664559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 109 - 283
Target Start/End: Complemental strand, 6325399 - 6325225
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 208  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||| || | ||||||||||||||||||||||||||||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  209 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||| || | || ||||||||||||| ||| |||| |||||||||||||||||| ||| |||||||||    
T  6325299 gactttatggtccctaggatatttagtgctgatatgtatgttttttatcaattaatgtgtgtcacgtgtgtaatt 6325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 7979565 - 7979742
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    ||||||| |||||| |||||||   ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||    
T  7979565 taggctttattgcacttttccct--tatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctct 7979662  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| | || |||||||||||||||||| |||||| || |||||||||||||||||| ||| |||||||||    
T  7979663 ttctgattttatgatccctatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaatt 7979742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 99 - 283
Target Start/End: Original strand, 7664240 - 7664415
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt 198  Q
    ||||| |||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  7664240 aaaaaataggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataatttt 7664339  T
Q  199 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||||||||| ||||||| |||||||||    ||     || |||||||||||||||||||||| |||||||||    
T  7664340 ccccctttctgattttatggtccccatgatatttagtgc----gt-----ttttttatcaattaatgtgtgccacgtgtgtaatt 7664415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 17850978 - 17851146
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||||| |||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa-cgagcgattttgccccctatagatttcccccttt 17851076  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
     |||||||||||| ||||||| ||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  17851077 atgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 17851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 16911321 - 16911154
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  16911321 gcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 16911223  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||  || ||||||||||||||| |       || |||||||||||||||||||| |||||||||||    
T  16911222 tgattttatggtctccgtgacatttagtgctggt-------ttttttatcaattaatgtgtgccgcatgtgtaatt 16911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 109 - 283
Target Start/End: Original strand, 19141446 - 19141611
Alignment:
Q  109 cttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttct 208  Q
    |||||||||| |||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||| ||| |||||||||||||||||||         
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccc----- 19141539  T
Q  209 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
       |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  19141540 ---tttatgatccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 19141611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 98 - 250
Target Start/End: Complemental strand, 5380022 - 5379870
Alignment:
Q  98 taaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttt 197  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| |||    
T  5380022 taaaaaataggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatatttt 5379923  T
Q  198 tccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgtt 250  Q
     ||||||||||||||| ||||| ||| |||||| | | |||||||||||||||    
T  5379922 accccctttctgatttgatggtccccctgacatctggcgctgatgtgtctgtt 5379870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 6324924 - 6325049
Alignment:
Q  114 ttgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattt 213  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T
Q  214 tatggttcccatgacatttagtgctg 239  Q
    |||||  |||||||||||||||||||    
T  6325024 tatggcccccatgacatttagtgctg 6325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 18749750 - 18749906
Alignment:
Q  132 tagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatt 231  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||||  |||||||||||||||||||||  ||||||||||||||||||  ||||| |||||    
T  18749750 tagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctatagtttt-tccctttctgattttatgggccccataacatt 18749848  T
Q  232 tagtgctgatgtgtctg---ttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||||||   || |||||||||||||||||||||| ||||||||||||    
T  18749849 tagtgctgatgtgtctgtttttttttatcaattaatgtgtgccacgtgtgtaatttca 18749906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 250
Target Start/End: Original strand, 5378659 - 5378804
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| ||| ||| ||    
T  5378659 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctct 5378758  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgtt 250  Q
    ||||||||| ||||| ||| || ||| | | |||||||||||||||    
T  5378759 ttctgatttgatggtccccctggcatctggcgctgatgtgtctgtt 5378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 5793450 - 5793578
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| ||||||||| | |||||||||||||||| ||||||||| || || |||| |||||||||||||||||||||||||||||||| |||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctg 5793549  T
Q  210 attttatggttcccatgacatttagtgct 238  Q
    |||||||||| |||||||||||| |||||    
T  5793550 attttatggtccccatgacattttgtgct 5793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 7980057 - 7979890
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||| || | |||||||||| ||||||| ||||||||||||||| |||| ||||||||||||| ||| ||||||||||| ||||||    
T  7980057 aggcttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttcccctt 7979959  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||||||| |||||||| ||        ||| |||||||||||||||||||||| |||||||||    
T  7979958 tctgattttatggtccccatgatatttagtgttg--------gtt-tttatcaattaatgtgtgccacgtgtgtaatt 7979890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 18750178 - 18750018
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| || |||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||              |||    
T  18750178 gcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct--------------ttc 18750094  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||    
T  18750093 tgattttatggtccccatgacatttagtgctgatgtgtttgttttttatcaattaatgtgtgtcacgtgtgtaatt 18750018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 37720203 - 37720307
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||    
T  37720203 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtttt-cccctt 37720300  T
Q  206 tctgatt 212  Q
    |||||||    
T  37720301 tctgatt 37720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 2638819 - 2638926
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  2638819 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctt 2638918  T
Q  206 tctgattt 213  Q
    ||||||||    
T  2638919 tctgattt 2638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 2639538 - 2639430
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  2639538 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 2639439  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  2639438 ttctgattt 2639430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 26841585 - 26841693
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  26841585 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 26841684  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  26841685 ttctgattt 26841693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 26842292 - 26842186
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||| |||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 26842193  T
Q  207 ctgattt 213  Q
    |||||||    
T  26842192 ctgattt 26842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 38490894 - 38490718
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||| || ||||||||||| ||||||||| ||||||||| | ||| |||| |||||||||||||||| ||| ||  ||||||||||||    
T  38490894 ggcttaattgcacttt-cctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttcccccttt 38490796  T
Q  207 ctgattttatggttcc-catgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
     |||||| | ||  || ||| || ||||||| ||||||  ||||| || |||| ||||||| |||||| |||||||||    
T  38490795 atgatttcaaggcccctcataacttttagtgatgatgtagctgtttttgatcatttaatgtttgccacgtgtgtaatt 38490718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 7591204 - 7591307
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||| | ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 7591303  T
Q  210 attt 213  Q
    ||||    
T  7591304 attt 7591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 18296077 - 18296182
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||| | ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||| ||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttc 18296176  T
Q  208 tgattt 213  Q
    ||||||    
T  18296177 tgattt 18296182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 7591904 - 7591798
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||| |||| | |||||  |||| |||||||| |||||||||||||||  ||| |||||||||||||||| ||  ||  ||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttcccccttt 7591805  T
Q  207 ctgattt 213  Q
    |||||||    
T  7591804 ctgattt 7591798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 30190915 - 30190977
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  30190915 aaaaaataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 6171511 - 6171456
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  6171511 aggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 20347519 - 20347464
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||    
T  20347519 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 18296748 - 18296691
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||    
T  18296748 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 24832330 - 24832387
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    ||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  24832330 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 24832387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 41790694 - 41790739
Alignment:
Q  310 tatttttcagattaattgataaaaataccatcattttcacgtgcct 355  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  41790694 tatttttcagattaattaataaaaatactatcattttcacgtgcct 41790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 11883622 - 11883677
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  11883622 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 11883980 - 11883926
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 29230280 - 29230334
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacc 159  Q
    |||||||||||||| |||||| | ||||  |||| ||||||||||||||||||||    
T  29230280 taggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 40469427 - 40469481
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||| ||||||||| |||||  ||||| ||||||| |||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcacccc 40469481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 43495308 - 43495356
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgatttt 154  Q
    ||||||||||||| ||||||| |||||| ||||| ||||||| ||||||    
T  43495308 aggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 97 - 283
Target Start/End: Complemental strand, 29074435 - 29074250
Alignment:
Q  97 ttaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtt 196  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29074435 ttaaaaaaaaggcttaattgc-tctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagtt 29074337  T
Q  197 ttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  29074336 ttcgccctttctgattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 29074250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 97 - 283
Target Start/End: Complemental strand, 29079199 - 29079014
Alignment:
Q  97 ttaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtt 196  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29079199 ttaaaaaaaaggcttaattgc-tctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagtt 29079101  T
Q  197 ttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  29079100 ttcgccctttctgattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 29079014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 97 - 283
Target Start/End: Complemental strand, 29107008 - 29106823
Alignment:
Q  97 ttaaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtt 196  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29107008 ttaaaaaaaaggcttaattgc-tctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagtt 29106910  T
Q  197 ttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  29106909 ttcgccctttctgattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaatt 29106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 7654603 - 7654426
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||| || |||||||||||||||||||||||||    
T  7654603 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccctt 7654504  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7654503 tctgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 7654426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 33974353 - 33974176
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 33974254  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||  |||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  33974253 ctgattttatggtctccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaatt 33974176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 2354409 - 2354584
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    ||||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2354409 ggcttaattgcatttttcccc-ctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttcccccttt 2354507  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  2354508 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatatgtgccacgtgtgtaatt 2354584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 106 - 281
Target Start/End: Complemental strand, 2354865 - 2354691
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2354865 aggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatagtttt-cccctt 2354767  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaa 281  Q
      |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  2354766 catgattttatggttcccatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgccacgtgtgtaa 2354691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 10087912 - 10087737
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10087813  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||| || ||||||||||||||||||| ||| |||| |||||| ||||||||||||||| |||||||||    
T  10087812 ctgattttatgg-tctcatgacatttagtgctgatatgtttgttttttatcgattaatgtgtgccacgtgtgtaatt 10087737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 110 - 286
Target Start/End: Complemental strand, 32734047 - 32733871
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctg 32733948  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatttca 286  Q
    |||||||||||||||||| ||||||||||||| ||||||||  |||| |||||||||||| ||| ||||||||||||    
T  32733947 attttatggttcccatgatatttagtgctgatatgtctgtttattattaattaatgtgtgtcacgtgtgtaatttca 32733871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 108 - 283
Target Start/End: Complemental strand, 22755142 - 22754968
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||||||||  ||||||||| ||||| || ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagttttcccc-tttc 22755044  T
Q  208 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  22755043 tgattttattgtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 22754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 283
Target Start/End: Original strand, 13176639 - 13176795
Alignment:
Q  127 ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatg 226  Q
    ||||||||||||||||||||  ||||||| | |||||  ||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  13176639 ccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattttatggtccccgtg 13176738  T
Q  227 acatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  13176739 acatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatt 13176795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 22684411 - 22684243
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||| |||||||    
T  22684411 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccccttt 22684313  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||| ||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  22684312 ctgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 22684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 22754657 - 22754825
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||| |||||||    
T  22754657 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccccttt 22754755  T
Q  207 ctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||| ||||||| ||||||||||| |       || |||||||||||||||||| ||| |||||||||    
T  22754756 ctgattttatggtccccatgatatttagtgctggt-------ttttttatcaattaatgtgtgtcacgtgtgtaatt 22754825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 32733549 - 32733691
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt 198  Q
    |||||| ||| |||| ||||||||| ||| |||||||||||||||| |  ||||||||| ||||| |||| |||||||| |||||||| |||||||||||    
T  32733549 aaaaagaaggtttaagtgcattttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttt 32733648  T
Q  199 ccccctttctgattttatggttcccatgacatttagtgctgat 241  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  32733649 tcccctttctgattttatggttcccatgacatttagtgctgat 32733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 13177110 - 13176984
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||| ||||| ||||||||| |||||| || |||||||| |||||| |||| ||| |||| ||||||||||||||||||| ||||||| ||||||||    
T  13177110 aggcttagttgcacttttccccc-tatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctt 13177012  T
Q  206 tctgattttatggttcccatgacattta 233  Q
    |||||||||||||| |||||||||||||    
T  13177011 tctgattttatggtccccatgacattta 13176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 33829692 - 33829584
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  33829692 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 33829593  T
Q  205 ttctgattt 213  Q
    |||||||||    
T  33829592 ttctgattt 33829584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 33828990 - 33829096
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 33829089  T
Q  207 ctgattt 213  Q
    |||||||    
T  33829090 ctgattt 33829096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 33973867 - 33974030
Alignment:
Q  110 ttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 209  Q
    ||||||| ||||||||| ||||||||||| || ||||| ||||||| ||   || |||| | ||||||||||||| ||||||||||||| ||  |||||     
T  33973867 ttaattgtatttttccctcctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctatagtttttcc--tttcta 33973964  T
Q  210 attttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||| |||||||||||||||| ||        ||| |||||||||||||||| ||||| |||||||||    
T  33973965 attttatggtccccatgacatttagtgttg--------gttttttatcaattaatgtgcgccacgtgtgtaatt 33974030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 2354681 - 2354638
Alignment:
Q  310 tatttttcagattaattgataaaaataccatcattttcacgtgc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2354681 tatttttcagattaattgataaaaataccatcattttcacgtgc 2354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 3403717 - 3403773
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 3403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 3404045 - 3403989
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  3404045 taggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 18241853 - 18241908
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||  ||||||| |||||||||||||    
T  18241853 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18241908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 18242210 - 18242156
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||||||   ||||||  ||||||||||||| |||||||||||||    
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcacccc 18242156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 10039673 - 10039729
Alignment:
Q  104 gtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||||| |||| ||||||||  ||||| ||||||| |||||||||||||    
T  10039673 gtaggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 13579706 - 13579651
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||| |||||||||||||    
T  13579706 taggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 99 - 283
Target Start/End: Complemental strand, 185336 - 185152
Alignment:
Q  99 aaaaagtaggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagtttt 198  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  185336 aaaaagttggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt 185237  T
Q  199 ccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||| ||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||    
T  185236 ccctctttctgattttatggtccccatgacatttagtgctaatatgtctgttttttatcaattaatgtgtgccacatatgtaatt 185152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 184840 - 184971
Alignment:
Q  108 gcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 207  Q
    ||||||||||| ||||| || |||||||||| ||| ||||  |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttc 184939  T
Q  208 tgattttatggttcccatgacatttagtgctg 239  Q
    |||||||||||| |||||||||||||||||||    
T  184940 tgattttatggtccccatgacatttagtgctg 184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 329 - 506
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||    
T  329 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 428  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    |||||||||||||| ||| ||||||||||||||||| ||| |||| |||||||||||||||||| ||| |||||||||    
T  429 tctgattttatggtccccgtgacatttagtgctgatatgtttgttttttatcaattaatgtgtgtcacgtgtgtaatt 506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 816 - 685
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| |||| |||| |||||||||||||||||| |||||||||||||||  ||| ||||||||||||||| ||||||||||||| | | |||    
T  816 ggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg-cccctatagtttt-ctcattt 720  T
Q  207 ctgattttatggttcccatgacatttagtgctgat 241  Q
    ||||||||||||| ||||||||||||| |||||||    
T  719 ctgattttatggtccccatgacatttaatgctgat 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 38750 - 38573
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| || | |||||| |||||||||||||||||||||||||||||    
T  38750 aggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccctt 38651  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||| ||  |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||    
T  38650 tctgattttatagtctccatgacatttagtgctgatatgtgtgttttttattaattaatgtgtgccacatgtgtaatt 38573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 38284 - 38427
Alignment:
Q  140 caattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctg 239  Q
    |||||||| ||||||||| ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctg 38383  T
Q  240 atgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||| |||||||||||||||||||||| |||||||||    
T  38384 atatgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 38427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 119; Significance: 1e-60; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 106 - 283
Target Start/End: Original strand, 9904 - 10082
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||| |||||| || |||| |||||||||||||||||||||||||||||||||||    
T  9904 aggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccct 10003  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    ||||||||||||||| ||||| |||||||||| |||| |||||||| ||||||||| |||||||||||| |||||||||    
T  10004 ttctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgccacgtgtgtaatt 10082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 10332 - 10226
Alignment:
Q  177 cgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgccacatg 276  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||| ||||||||| |||||||||||| ||    
T  10332 cgattttgcaccctatagttttccccctttctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgccacgtg 10233  T
Q  277 tgtaatt 283  Q
    |||||||    
T  10232 tgtaatt 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 10373 - 10320
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccc 160  Q
    |||||||||| ||| ||||||||  |||||||||||||||||  ||||||||||||    
T  10373 taggcttaatagcacttttcccc--tatagtttgccaattgtccgattttgcaccc 10320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 106 - 269
Target Start/End: Original strand, 50074 - 50234
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| |||  |||||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||    
T  50074 aggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagtttt-cccctt 50170  T
Q  206 tctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 269  Q
    |||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||    
T  50171 tctgattttatggtccctatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 50560 - 50426
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| || |||| |||||||| ||||||||||||||||||| |||||||    
T  50560 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 50462  T
Q  206 tctgattttatggttcccatgacatttagtgctgat 241  Q
    |||||||||||||| ||||||||||||| |||||||    
T  50461 tctgattttatggtccccatgacatttaatgctgat 50426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 20099 - 19921
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 204  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| |||||||| |||||| |||| ||||   |||||||||||||||||| |||||||||    
T  20099 taggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctatag-tttccccct 20001  T
Q  205 ttctgattttatggttcccatgacatttagtgctgatgtgtctg-ttatttatcaattaatgtgtgccacatgtgtaatt 283  Q
    || |||||||||||| || ||||||||||||| |||| |||||| || |||||||||||||||||| ||| |||||||||    
T  20000 ttttgattttatggtccctatgacatttagtgttgatatgtctgtttttttatcaattaatgtgtgtcacctgtgtaatt 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 19620 - 19752
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 205  Q
    ||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||||    
T  19620 aggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctcccctt 19718  T
Q  206 tctgattttatggttcccatgacatttagtgctg 239  Q
    ||| |||||||||| ||||||||||||| |||||    
T  19719 tctaattttatggtccccatgacatttaatgctg 19752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 6849 - 6743
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6750  T
Q  207 ctgattt 213  Q
    |||||||    
T  6749 ctgattt 6743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 6152 - 6258
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 206  Q
    |||||||||||| ||||| || ||||  ||||| ||||||| |||||| ||||||||  ||| ||| |||||||||||| ||| ||  ||||||||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttcccccttt 6251  T
Q  207 ctgattt 213  Q
    |||||||    
T  6252 ctgattt 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 6393 - 6448
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  6393 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 6448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 25424 - 25369
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    ||||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  25424 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 25369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 1474 - 1420
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 438930 - 438984
Alignment:
Q  107 ggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||| |||||||||||||  ||||| ||||||| |||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 438984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 183717 - 183670
Alignment:
Q  106 aggcttaattgcatttttcccccctatagtttgccaattgtgtgattt 153  Q
    ||||||||||||| |||||||||||||| ||||| ||||||| |||||    
T  183717 aggcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 45862 - 45807
Alignment:
Q  105 taggcttaattgcatttttcccccctatagtttgccaattgtgtgattttgcacccc 161  Q
    |||||||||||||| ||||||||| |||  ||||||||||||| |||||||||||||    
T  45862 taggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 45807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 1538 - 1566
Alignment:
Q  135 tttgccaattgtgtgattttgcaccccat 163  Q
    |||||||||||||||||||||||||||||    
T  1538 tttgccaattgtgtgattttgcaccccat 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University