View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21264_low_2 (Length: 514)
Name: NF21264_low_2
Description: NF21264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21264_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 478; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 34077606 - 34078095
Alignment:
| Q |
18 |
cctgctgggtgcatgcggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctattagggccaaccacta |
117 |
Q |
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| T |
34077606 |
cctgctggatgcatgcggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctattagggccaaccacta |
34077705 |
T |
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| Q |
118 |
catcaagctcttcttggattttgtgaaggacgtgtggatgtttgattacctctgtcatcgcccattcattagtaacggctgaagtgtccgttgcagccgc |
217 |
Q |
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| T |
34077706 |
catcaagctcttcttggattttgtgaagaacgtgtggatgtttgattacctctgtcatcgcccattcattagtaacggctgaagtgtctgttgcagccgc |
34077805 |
T |
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| Q |
218 |
gatcatgtcctaaatatttagtataactacattattttcaatcattacatgaaaaattaaacaaaattaatagagaaaaagtcatacctgaatcaaagct |
317 |
Q |
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| T |
34077806 |
gatcatgtcctaaatatttagtataactacattattttcaatcattacatgaaaaattaaacaaaattaatagagaaaaagtcatacctgaatcaaagct |
34077905 |
T |
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| Q |
318 |
tttatctcaacatcatccatatgctcttttccatcttcaccaggcaaagacaataaaatatccacaaaatcaagttcttcatcactttttcctatccctt |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077906 |
tttatctcaacatcatccatatgctcttttccatcttcaccaggcaaagacaataaaatatccacaaaatcaagttcttcatcactttttcctatccctt |
34078005 |
T |
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| Q |
418 |
tcttatctttccttgcctttctatgttcttcaagaattttggagtgaaagtcatcaactcttttttctacttccctcattttcttctcac |
507 |
Q |
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| T |
34078006 |
tcttatctttccttgcctttctatgttcttcaagaattttggagtgaaagtcatcaactcttttttctacttccctcattttcttctcac |
34078095 |
T |
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