View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21265_high_19 (Length: 299)
Name: NF21265_high_19
Description: NF21265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21265_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 22574817 - 22574530
Alignment:
| Q |
1 |
caaatatattttttctatttcaaattatttaccgtgattatttcatctttttcctagtggttagtagagttaatgagaggatggaactatgagggnnnnn |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
22574817 |
caaatatattttttctatttcaaattatttaccgtgattatttcatctttatcctagtggttagtagagttaatgagaggatggaactattaggaaaaaa |
22574718 |
T |
|
| Q |
101 |
nngaggatggaactatgtttgtgttagttgtgagaaatttatatcaacgaactttagtctttacaatttgataacctcacaatttcttcagtaagtcaat |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22574717 |
atgaggatggaactatgtttgtgttagttgtgacaaatttatatgaacgaactttagtctttacaatttgataacctcacaatttcttcagtaagtcaat |
22574618 |
T |
|
| Q |
201 |
ttcattggatttttcttcaggaactgctccttatccttacatgctatttgcattatggatcctatgataaatacaccatatatttcat |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
22574617 |
ttcattggatttttcttcaggaactgctccttatccttacatgctatttgcattatcgatcctatgataaatacaccatatatttcat |
22574530 |
T |
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