View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21265_high_22 (Length: 254)
Name: NF21265_high_22
Description: NF21265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21265_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 4706727 - 4706571
Alignment:
| Q |
17 |
atgaaagataaagccgagaaacacgacaattttcaaaactatcaattccacataaacaagaaataaactttctaaagaaaaatttaattttactgaaaaa |
116 |
Q |
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| T |
4706727 |
atgaaagataaagctgagaaacacgacaattttcaaaactatcaattccacataaacaagaaataaactttctaaagaaaaatttaattttactgaaaaa |
4706628 |
T |
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| Q |
117 |
ctctgattgcctctagatttattccaaatgaggaaaggcttggtattttctttctat |
173 |
Q |
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| T |
4706627 |
ctctgattgcctctagatttattccaaatgaggaaaggcttggtattttctttctat |
4706571 |
T |
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