View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21265_low_11 (Length: 424)
Name: NF21265_low_11
Description: NF21265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21265_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 13 - 411
Target Start/End: Complemental strand, 14703280 - 14702882
Alignment:
| Q |
13 |
aatataatatagtgtattgagaatctgcaagaagtttctagtttggtggatcaatgtcatggtgaatggaaaccaacaacatgaggatattaagtctttg |
112 |
Q |
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| T |
14703280 |
aatataatataatgtatttagaatctgcaagaagtttctagtttggtggatcaatgtcatggtgaatggaaaccaacaacatgagggtataaagtcttta |
14703181 |
T |
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| Q |
113 |
ccattgaatgcatggactatacctttactattcaccatgtgatataaagaaagggacaagtaccactataaatgcacacagtgccaaacctaaagaatct |
212 |
Q |
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| T |
14703180 |
ccattgaatgcatggactatacctttactattcaccatgtgatataaagaaagggacaagtaccactataaatgcacacagtgccaaacctaaagaatct |
14703081 |
T |
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| Q |
213 |
cctacttatagcaagttttaataagctaaaataattcttaaatgtcaattataagaaaacaacttagttaattaatcttcaaataattatgtttttacct |
312 |
Q |
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| T |
14703080 |
cctacttatagcaagttttaataagctaaaataattcttaaatgtgaattataagaaaacaacttagataattaatcttcaaataattatgtttttacct |
14702981 |
T |
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| Q |
313 |
cagcttcattggggtccacttgggagtcaagatccacaaattgatctgtctggctacagctctcttcatctcctttgcactgagttggggggcaattag |
411 |
Q |
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| T |
14702980 |
ctgcttcattggggtccacttgggagtcaagatccacaaattgatctgtctggctacagctctcttcatctcctttgcactgagttggggggcaattag |
14702882 |
T |
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