View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21265_low_24 (Length: 280)
Name: NF21265_low_24
Description: NF21265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21265_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 33229476 - 33229214
Alignment:
| Q |
1 |
tcataaccgaaagcagaccatgccgcacaagttttaatgtcttgtaacacttgcaataagaatgtgacaagttcagttatatcggcaggaacctttctga |
100 |
Q |
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||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33229476 |
tcataaccgaaagcagaccatgctgcccaagttttaatgtcttgtaacacttgcaataagaatgtgacaagttcagttatatcggcaggaacctttctga |
33229377 |
T |
|
| Q |
101 |
attgaacttggctaagttgcttcaatgagtttccaagtgtgtctgatgattgaatcctatgaagatgcataattgcaccatactccaaagagaatgcagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33229376 |
attgaacttggctaagttgcttcaatgagtttccaagtgtgtctgatgattgaatcctatgaagatgcataattgcaccatactccaaagagaatgcagc |
33229277 |
T |
|
| Q |
201 |
tagagttatcaatgcttttgcttcccaagagaagcctctgaggtgatggagaacccacattgt |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33229276 |
tagagttatcaatgcttttgcttcccaagagaagcctctgaggtgatggagaacccacattgt |
33229214 |
T |
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