View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21266_high_24 (Length: 319)
Name: NF21266_high_24
Description: NF21266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21266_high_24 |
 |  |
|
| [»] scaffold0181 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 15 - 307
Target Start/End: Complemental strand, 6381795 - 6381507
Alignment:
| Q |
15 |
tatactatgcattgaataaagtatggaacatggaagcaaatggatgctaacacaacacttttatgactttttgtcttttacatacataagttgaatttgg |
114 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6381795 |
tatactacgcattgaataaagtatggaacatggaagcaaatggatgctaacacaacacttttatgactttttgtcttttacatacataagttgaatttgg |
6381696 |
T |
 |
| Q |
115 |
attcatataatcataagctctctcattcattcattaccgtagtaacttcatagctaagaattaatattcaagacaaacaaataaggtggcattttacatg |
214 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6381695 |
attcatataatcataagctctctcattcact----accgtagtaacttcatagctaagaattaatattcaagacaaacaaataaggtggcatttcacatg |
6381600 |
T |
 |
| Q |
215 |
ggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctcaacattaga |
307 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6381599 |
ggaaaggataaaacttttccaccataggaaagtcaattttaaccactagattaagcaaagaacattgtcttatcatagactctcaatattaga |
6381507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 3135922 - 3135992
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaa |
268 |
Q |
| |
|
||||||||||| ||||||||| | ||||||| ||| |||||| ||||||| |||||| |||||| ||||| |
|
|
| T |
3135922 |
aggtggcatttcacatgggaaggtataaaaccttcccaccatgggaaagtttattttagccactagattaa |
3135992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 46187936 - 46187830
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactct |
297 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
46187936 |
aggtggcatttcacatgggaaaggataaaactttctcaccatgggagagtcaattttaaccactagattaagcaaagaacattgtcttatcatagactct |
46187837 |
T |
 |
| Q |
298 |
caacatt |
304 |
Q |
| |
|
||||||| |
|
|
| T |
46187836 |
caacatt |
46187830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 45529495 - 45529392
Alignment:
| Q |
199 |
ggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctc |
298 |
Q |
| |
|
|||||||||| |||| |||||| |||||| |||| | | || ||||||| ||||||||||||||||| ||| |||||||||| | ||||||||||||||| |
|
|
| T |
45529495 |
ggtggcatttaacataggaaagcataaaagtttcccgctatgggaaagttaattttaaccactaaatcaagtaaagaacattatgttatcatagactctc |
45529396 |
T |
 |
| Q |
299 |
aaca |
302 |
Q |
| |
|
|||| |
|
|
| T |
45529395 |
aaca |
45529392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 55125375 - 55125267
Alignment:
| Q |
199 |
ggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctc |
298 |
Q |
| |
|
|||||||||| ||||| || ||| || | |||| |||||||| ||||| ||||||| ||| || |||||| ||||||||||||||||| || |||||| |
|
|
| T |
55125375 |
ggtggcatttagcatggaaatggacaatagtttcccaccatagaaaagtaaattttatccattagattaagtaaagaacattgtcttatggtacactctc |
55125276 |
T |
 |
| Q |
299 |
aacattaga |
307 |
Q |
| |
|
|||| |||| |
|
|
| T |
55125275 |
aacactaga |
55125267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 46187148 - 46187195
Alignment:
| Q |
199 |
ggtggcattttacatgggaaaggataaaactttctcaccataggaaag |
246 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
46187148 |
ggtggcatttcacatgggaaagtgtaaaactttcccaccataggaaag |
46187195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 13810648 - 13810598
Alignment:
| Q |
197 |
aaggtggcattttacatgggaaaggataaaactttctcaccataggaaagt |
247 |
Q |
| |
|
|||||| ||||| |||||||||||| |||||||||| ||| |||||||||| |
|
|
| T |
13810648 |
aaggtgacatttaacatgggaaagggtaaaactttcccacgataggaaagt |
13810598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 48219321 - 48219275
Alignment:
| Q |
199 |
ggtggcattttacatgggaaaggataaaactttctcaccataggaaa |
245 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||| ||||| |
|
|
| T |
48219321 |
ggtggcattttacatgggaaaggttaattctttctcaccatgggaaa |
48219275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 37373961 - 37374013
Alignment:
| Q |
195 |
ataaggtggcattttacatgggaaaggataaaactttctcaccataggaaagt |
247 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||| |||||| ||||||| |
|
|
| T |
37373961 |
ataaggtggcattttacatgggaaaggttaatcttttcccaccatgggaaagt |
37374013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 29148939 - 29148882
Alignment:
| Q |
247 |
tcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctcaacatt |
304 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29148939 |
tcaattttaaccactagattaagcaaagaacattgtcttatcatagactctcaacatt |
29148882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 13361602 - 13361682
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaaca |
278 |
Q |
| |
|
||||||||||| | || ||||||| |||||||||| |||||| ||||||| ||||| |||||| | || ||| |||||||| |
|
|
| T |
13361602 |
aggtggcatttaatataggaaagggtaaaactttcccaccatgggaaagttaatttgaaccaccagatcaagtaaagaaca |
13361682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 9429808 - 9429853
Alignment:
| Q |
242 |
gaaagtcaattttaaccactaaattaagcaaagaacattgtcttat |
287 |
Q |
| |
|
|||||| ||||||| ||| ||||||||| ||||||||||||||||| |
|
|
| T |
9429808 |
gaaagtaaattttatccattaaattaagtaaagaacattgtcttat |
9429853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 302
Target Start/End: Complemental strand, 11032268 - 11032164
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactct |
297 |
Q |
| |
|
||||||||||| |||||||||||| || | |||| |||||| ||||||| | ||| |||| || |||||| || ||||| ||||||||| |||||| |
|
|
| T |
11032268 |
aggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagtaatgaacacattcttatcatggactct |
11032169 |
T |
 |
| Q |
298 |
caaca |
302 |
Q |
| |
|
||||| |
|
|
| T |
11032168 |
caaca |
11032164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 37114633 - 37114584
Alignment:
| Q |
210 |
acatgggaaaggataaaactttctcaccataggaaagtcaattttaacca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
37114633 |
acatgggaaaggataaaactttcccaccataaaaaagtcaattttaacca |
37114584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 6680378 - 6680282
Alignment:
| Q |
211 |
catgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctcaacattaga |
307 |
Q |
| |
|
||||||||||| || | ||||||||||| ||||||| ||| || |||| || |||||| ||||||||| || |||||||||| |||||||| |||| |
|
|
| T |
6680378 |
catgggaaagggaaagagtttctcaccatgggaaagtaaatattgaccattagattaagtaaagaacatagttttatcatagattctcaacactaga |
6680282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 7988333 - 7988228
Alignment:
| Q |
197 |
aaggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactc |
296 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||||||||||||||| ||| |||| || |||||| || |||||| | ||||||||| ||| |
|
|
| T |
7988333 |
aaggtggcatttaacatgggaaagggaaatcctttctcaccataggaaagtttttttggaccattagattaagtaaggaacataatattatcatagtctc |
7988234 |
T |
 |
| Q |
297 |
tcaaca |
302 |
Q |
| |
|
|||||| |
|
|
| T |
7988233 |
tcaaca |
7988228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 300
Target Start/End: Complemental strand, 50057010 - 50056906
Alignment:
| Q |
196 |
taaggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagact |
295 |
Q |
| |
|
||||||| ||||| |||||||||| ||||| | |||| || ||| |||||| ||||| |||||||| || ||| ||||||| ||||||| | |||||| |
|
|
| T |
50057010 |
taaggtgacatttaacatgggaaatgataatattttcccatcatgagaaagttaatttgaaccactagatcaagtaaagaacgctgtcttaccgtagact |
50056911 |
T |
 |
| Q |
296 |
ctcaa |
300 |
Q |
| |
|
||||| |
|
|
| T |
50056910 |
ctcaa |
50056906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 43079160 - 43079263
Alignment:
| Q |
199 |
ggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctc |
298 |
Q |
| |
|
|||||||||| ||||||||||||| || ||| ||| || ||||||| ||||||| ||| || || ||| ||||||||| |||||||||| |||||| |
|
|
| T |
43079160 |
ggtggcatttcacatgggaaaggacaatctttttccacaatgggaaagttaattttatccattagatcaagtaaagaacatagtcttatcatgcactctc |
43079259 |
T |
 |
| Q |
299 |
aaca |
302 |
Q |
| |
|
|||| |
|
|
| T |
43079260 |
aaca |
43079263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 39844889 - 39844943
Alignment:
| Q |
192 |
caaataaggtggcattttacatgggaaaggataaaactttctcaccataggaaag |
246 |
Q |
| |
|
||||||||||||||||| |||||||||||| || ||||| ||||||||||||| |
|
|
| T |
39844889 |
caaataaggtggcatttcacatgggaaaggggaatcctttcccaccataggaaag |
39844943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 52720595 - 52720645
Alignment:
| Q |
197 |
aaggtggcattttacatgggaaaggataaaactttctcaccataggaaagt |
247 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||| ||| |||||||||||||| |
|
|
| T |
52720595 |
aaggtggcatttcacatgggaaggtataaaacattcccaccataggaaagt |
52720645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 25370479 - 25370430
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagt |
247 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||| |||||| ||||||| |
|
|
| T |
25370479 |
aggtggcattttacatgggaaaggttaatcctttcccaccatgggaaagt |
25370430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 52597798 - 52597749
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagt |
247 |
Q |
| |
|
||||||||||| |||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
52597798 |
aggtggcatttcacatgggaaaggttaatcctttttcaccataggaaagt |
52597749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 15071 - 15122
Alignment:
| Q |
192 |
caaataaggtggcattttacatgggaaaggataaaactttctcaccatagga |
243 |
Q |
| |
|
||||| ||||||||||| |||||||||||| |||||||||| |||||||||| |
|
|
| T |
15071 |
caaatcaggtggcatttaacatgggaaagggtaaaactttcccaccatagga |
15122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0181; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 15960 - 15901
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaac |
257 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| ||| || ||||||| ||| ||||| |
|
|
| T |
15960 |
aggtggcatttaacatgggaaagggtaaaactttcccactatgggaaagttaatattaac |
15901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 12732888 - 12732780
Alignment:
| Q |
199 |
ggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctc |
298 |
Q |
| |
|
|||||||||| ||||| || ||| || | |||| |||||| |||||| ||||||| ||| || |||||| ||||||||||||||||| || |||||| |
|
|
| T |
12732888 |
ggtggcatttagcatggaaatggacaatagtttcccaccatgagaaagtaaattttatccattagattaagtaaagaacattgtcttatggtacactctc |
12732789 |
T |
 |
| Q |
299 |
aacattaga |
307 |
Q |
| |
|
|||| |||| |
|
|
| T |
12732788 |
aacactaga |
12732780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 12732259 - 12732353
Alignment:
| Q |
211 |
catgggaaaggataaaactttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctcaacatta |
305 |
Q |
| |
|
||||||||||| || | |||| |||||| ||||||| ||| || |||| || || | | ||||||||| || |||||||||||||||||||||| |
|
|
| T |
12732259 |
catgggaaagggaaagagtttcccaccatgggaaagtaaatattgaccattagatcatgtaaagaacatagttttatcatagactctcaacatta |
12732353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 27600113 - 27600040
Alignment:
| Q |
229 |
tttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctcaaca |
302 |
Q |
| |
|
|||| |||||| ||||||| || ||| ||||||| |||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
27600113 |
tttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctcaaca |
27600040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 48881110 - 48881053
Alignment:
| Q |
197 |
aaggtggcattttacatgggaaaggataaaactttctcaccataggaaagtcaatttt |
254 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||| |||||||||| ||| |||||| |
|
|
| T |
48881110 |
aaggtggcattttacatggaaaaggttaatcctttcccaccataggacagttaatttt |
48881053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 42915828 - 42915750
Alignment:
| Q |
229 |
tttctcaccataggaaagtcaattttaaccactaaattaagcaaagaacattgtcttatcatagactctcaacattaga |
307 |
Q |
| |
|
|||| |||||||||||||| ||||| || | |||||||| ||||||||| || |||||||||||||| |||| |||| |
|
|
| T |
42915828 |
tttcccaccataggaaagttgattttgactattaaattaaataaagaacatggtattatcatagactcttaacactaga |
42915750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 37562307 - 37562355
Alignment:
| Q |
211 |
catgggaaaggataaaactttctcaccataggaaagtcaattttaacca |
259 |
Q |
| |
|
|||||||||||| || |||| |||||||||||||||||||||||||| |
|
|
| T |
37562307 |
catgggaaaggagaattgtttcccaccataggaaagtcaattttaacca |
37562355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 28223787 - 28223836
Alignment:
| Q |
198 |
aggtggcattttacatgggaaaggataaaactttctcaccataggaaagt |
247 |
Q |
| |
|
||||||||||| |||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
28223787 |
aggtggcatttcacatgggaaaggttaatcctttcccaccataggaaagt |
28223836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University