View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21266_high_38 (Length: 263)
Name: NF21266_high_38
Description: NF21266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21266_high_38 |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 9679148 - 9679397
Alignment:
| Q |
1 |
ctttttgtctcctcccccacctccctcattattttttcttgcacttaaaactttctcatatttgtatctaacaaaagtttgttgttgatgttgtagtttg |
100 |
Q |
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| T |
9679148 |
ctttttgtctcctcccccacctccctcattatcttttcttgcacttaaaactttctcatatttgtatctaacaaaagtttgttgttgatgttgtagtttg |
9679247 |
T |
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| Q |
101 |
gtttattggacccaccaaacattttctatcaagtccaagaaaatggaaatagcaatgttcatgaaaacctcttctaaacactttcctaaattctatccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9679248 |
gtttattggacccaccaaacattttctatcaagtccaagaaaatggaaatagcaatgttcatgaaaacctcttctaaacactttcctaaattctatccat |
9679347 |
T |
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| Q |
201 |
caatctaacaatgcaagatcaattcatcatcctatctttgtttcttgttc |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9679348 |
caatctaacaatgcaagatcaattcatcatcctatctttgtttcttgttc |
9679397 |
T |
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