View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21266_high_43 (Length: 250)
Name: NF21266_high_43
Description: NF21266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21266_high_43 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 11296381 - 11296625
Alignment:
| Q |
6 |
agtgagatgaatcaaattgcttttataatttgaaacaactgcacaccctaaaaaacccaggaaactgaaatatataggacctggtacggattcgagtcca |
105 |
Q |
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| T |
11296381 |
agtgagatgaatcaaattgcttttataatttgaaacaactgcacaccctaaaaaacccaggaaactgaaatatataggacctggtacggattcgagtcca |
11296480 |
T |
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| Q |
106 |
gctgtgggaaactcaatctcctgtttaagatcgttgttcattataggctctatagtagattcactcctcagtttggagtgtgcaactttcattctcaatt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11296481 |
gctgtgggaaactcaatctcctgtttaagatcgttgttcattataggctctatagtagattcactcctcagtttggagtgtgcaactttcattctcaatt |
11296580 |
T |
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| Q |
206 |
gctaattaaaatgttatcagatatgactcaccattagctgtttgt |
250 |
Q |
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| T |
11296581 |
gctaattaaaatgttatcagatatgactcaccattagctgtttgt |
11296625 |
T |
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