View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21266_low_17 (Length: 408)
Name: NF21266_low_17
Description: NF21266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21266_low_17 |
 | |
|
| [»] scaffold0632 (1 HSPs) |
| | |
|
| [»] scaffold0599 (1 HSPs) |
| | |
|
| [»] scaffold0156 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 310; Significance: 1e-174; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 53 - 398
Target Start/End: Complemental strand, 24903327 - 24902982
Alignment:
| Q |
53 |
atcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattt |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24903327 |
atcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattt |
24903228 |
T |
|
| Q |
153 |
tagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttc |
252 |
Q |
| |
|
||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24903227 |
tagccatgtactttacttataaaactaatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttc |
24903128 |
T |
|
| Q |
253 |
ctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcatt |
352 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24903127 |
ctttcttgcctctgaaaaataaagtaattttacttaggttatggagatgttggttggtcatttatcctcaaaactcaatatgtctaaggtggttgtcatt |
24903028 |
T |
|
| Q |
353 |
gatagggacaatactctgatgaatgttgttgccaaagttctctctg |
398 |
Q |
| |
|
| |||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
24903027 |
gttagggacaatgctctgatgattgttgttgccaaagttctctctg |
24902982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 394
Target Start/End: Complemental strand, 6598409 - 6598055
Alignment:
| Q |
42 |
agcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagata--tattttttgctcatctggagtctattaatttgctaaacagt |
139 |
Q |
| |
|
|||||||||| ||| ||||||||||| |||| | ||| |||||||||||||||| | |||||||| |||||| |||| |||||| || | ||| | |
|
|
| T |
6598409 |
agcataaatacatctatttcacaagagcaaacagggaggaaaccactcttgaagacacatatttttttctcatccaaagtcgattaatatgatttacact |
6598310 |
T |
|
| Q |
140 |
ttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatatt |
239 |
Q |
| |
|
||||||||| |||| |||||||||| ||||| |||| ||| | ||| ||||||| |||||| |||||||| |||| ||||||||||| ||| |||||| |
|
|
| T |
6598309 |
ttttcgaccgttttggtcatggactccacttacaaaacaaatttctatcgaatgccgttatttgagattgtttgtgtcacctctaccaaaatggcatatt |
6598210 |
T |
|
| Q |
240 |
ctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaa |
339 |
Q |
| |
|
| |||| ||| || ||||| ||| |||| || || | | ||||||| || | ||||||||||||| || ||| |||| ||||||||| ||| |||| |
|
|
| T |
6598209 |
ccgttggtttggccattctttcctttgaacaagaggatgaatttacttgggaacttgagatgttggttgatcatttgtccttaaaactcaacatgcctaa |
6598110 |
T |
|
| Q |
340 |
ggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| |||| |||||||||| |
|
|
| T |
6598109 |
ggtggttgtcaccgatagggacaatgctctgatgaatgtcgttgtcaaagttctc |
6598055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 361
Target Start/End: Original strand, 55525062 - 55525405
Alignment:
| Q |
18 |
aatatttggttacggagttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctgga |
117 |
Q |
| |
|
|||| ||| |||| ||||||||||||||| |||| || | ||||||||| | ||| | ||| |||||| ||||||||| |||| |||||||| | |
|
|
| T |
55525062 |
aatacttgattacagagttggagaagcatcgatatgtctacttcacaagagctaatagcgagttaaccacacttgaagatttattctttgctcacacaaa |
55525161 |
T |
|
| Q |
118 |
gtctattaatttgctaaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgtt |
217 |
Q |
| |
|
|| ||| || |||| |||| |||| | ||| |||| |||||||||| || || |||| |||| || ||||||| |||||| |||||||||||||| |
|
|
| T |
55525162 |
atcaattgatatgctcaacacttttcccaccgttttggtcatggactccacctacaaaaccaatacctaccgaatgcctttatttgagattgttggtgtt |
55525261 |
T |
|
| Q |
218 |
acctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttat |
317 |
Q |
| |
|
||||||||||| |||| ||||| ||||| |||||||||||| ||| ||||| | ||| ||| || | | | | |||||||||||||||||||| |
|
|
| T |
55525262 |
acctctaccaaattgacctattcggttgcgttttcctttctttcctttgaaagagagaataaattcatatggacacttgagatgttggttggtcttttga |
55525361 |
T |
|
| Q |
318 |
cctcaaaactcaatatgtctaaggtggttgtcattgatagggac |
361 |
Q |
| |
|
|||||||| ||| ||| |||||||| |||||| ||||||||| |
|
|
| T |
55525362 |
cctcaaaaaacaacatgcctaaggtgattgtcaccgatagggac |
55525405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 269
Target Start/End: Complemental strand, 11693591 - 11693355
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
||||||||||| || ||||| || |||| |||||| ||||| | ||| |||||||||||||||| |||| |||||||||| ||| || ||| || |||| |
|
|
| T |
11693591 |
agttggagaagaatcaatatgtctattttacaagagcaaatagcgaggaaaccactcttgaagacttattctttgctcatccggattcaattgatatgct |
11693492 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatg |
232 |
Q |
| |
|
||| |||| | || |||| |||||||||| || || |||| || | || ||||| |||||||| ||||| ||||||| ||||||||||| ||| |
|
|
| T |
11693491 |
tcacacttttcccactgttttggtcatggactccacctacaaaaccaacacctaccgaatgtcattatttgagatttttggtgtcacctctaccaaaatg |
11693392 |
T |
|
| Q |
233 |
acatattctgttgctttttcctttcttgcctctgaaa |
269 |
Q |
| |
|
|| ||||| ||||| ||| |||||||| ||| ||||| |
|
|
| T |
11693391 |
acgtattcggttgcgtttgcctttctttcctttgaaa |
11693355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 394
Target Start/End: Original strand, 36500198 - 36500574
Alignment:
| Q |
18 |
aatatttggttacggagttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctgga |
117 |
Q |
| |
|
|||| ||| |||| ||||||||||||||| |||| || | ||||||||| ||| ||||| ||||||| ||||||||| |||| |||||||| | | |
|
|
| T |
36500198 |
aatacttgattacagagttggagaagcatcgatatgtctacttcacaagagataatagtgaggaaaccacacttgaagatttattctttgctcacccaaa |
36500297 |
T |
|
| Q |
118 |
gtctattaatttgctaaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgtt |
217 |
Q |
| |
|
|| | | || |||| |||| |||| | ||| |||| |||||||||| || || |||| |||| || ||||||| |||||| ||||||||||||| |
|
|
| T |
36500298 |
atcaactgatatgctcaacacttttcccaccgttttggtcatggactccacctacaaaaccaatacctaccgaatgcctttatttgagattgttggtgtc |
36500397 |
T |
|
| Q |
218 |
acctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttat |
317 |
Q |
| |
|
||||||||||| |||| ||||| ||||| ||| |||||||| ||| ||||| | ||| ||| || | | | | |||||||||||||||||||| |
|
|
| T |
36500398 |
acctctaccaaattgacctattcggttgcgtttgcctttctttcctttgaaagagagaataacttcatatggacacttgagatgttggttggtcttttga |
36500497 |
T |
|
| Q |
318 |
cctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
|||| ||| ||| ||| |||||||| |||||| ||||||||| || ||||||| || |||||| |||||||| |
|
|
| T |
36500498 |
cctcgaaaaacaacatgcctaaggtgattgtcaccgatagggaccccgctttgatgaaagtcgttgccgaagttctc |
36500574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 50007822 - 50007739
Alignment:
| Q |
81 |
aaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
|||||||||||||||| || ||||||||||||| |||||| ||||| ||||| |||| |||| | ||| |||| |||||||||| |
|
|
| T |
50007822 |
aaaccactcttgaagacatcttttttgctcatccggagtcaattaaattgctcaacacttttccaaccgtttttgtcatggact |
50007739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 158; Significance: 6e-84; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 31 - 395
Target Start/End: Complemental strand, 20162446 - 20162081
Alignment:
| Q |
31 |
ggagttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaa-ccactcttgaagatatattttttgctcatctggagtctattaattt |
129 |
Q |
| |
|
|||||| ||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||| |||| |
|
|
| T |
20162446 |
ggagttagagaagcataaatatgcctatttcacaagaacaaattgtgaggaaaaccactcttgaagacatattttttgctcatccggagcctatttattt |
20162347 |
T |
|
| Q |
130 |
gctaaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaac |
229 |
Q |
| |
|
|| |||| || | | ||| |||| |||||||||| |||||||||| |||||||| ||||||||||||||| | || |||||||||||||||||| || |
|
|
| T |
20162346 |
tcttaacatttctccaaccgttttggtcatggactccacttataaaatcaatatgtacagaatgccattatttgatatagttggtgttacctctaccgac |
20162247 |
T |
|
| Q |
230 |
atgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactca |
329 |
Q |
| |
|
||||||||||||||| |||| | |||||| ||| | ||||| || |||| |||||| ||| | |||||||||||||||||||| ||||||||||||| |
|
|
| T |
20162246 |
atgacatattctgtttattttccttttctttcctttaaaaaagagtgtaacattacttgagttctagagatgttggttggtcttttgtcctcaaaactca |
20162147 |
T |
|
| Q |
330 |
atatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctct |
395 |
Q |
| |
|
||||| |||||||| |||||| ||| | ||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
20162146 |
atatgcctaaggtgattgtcactgacatggacactattctgatgtatgttgttgccaaagttctct |
20162081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 394
Target Start/End: Original strand, 11273107 - 11273483
Alignment:
| Q |
18 |
aatatttggttacggagttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctgga |
117 |
Q |
| |
|
|||| |||||||| ||||||||||| | |||||| | ||||||| || ||||| |||| | |||||||||||||| || ||||||||||||| || |
|
|
| T |
11273107 |
aatacttggttacaaagttggagaagaacaaatatgtttatttcaccagggcaaatcgtgatgataccactcttgaagacatgttttttgctcatcctga |
11273206 |
T |
|
| Q |
118 |
gtctattaatttgctaaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgtt |
217 |
Q |
| |
|
| ||||||||| || |||| ||||||||| |||| |||| ||||| |||||||||| || ||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
11273207 |
atatattaatttacttaacactttttcgactgttttggtcaaggactccacttataaaacgaacttgtatagaatgccgttatttgagatagttggtgtt |
11273306 |
T |
|
| Q |
218 |
acctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttat |
317 |
Q |
| |
|
||||||||||||| | |||||| |||||||||| | |||||||||||| ||||||| |||| ||||||| |||| | || ||||||||||||||||| | |
|
|
| T |
11273307 |
acctctaccaacaaggcatattatgttgcttttgcttttcttgcctctaaaaaataaggtaactttacttgggttttagaaatgttggttggtcttttgt |
11273406 |
T |
|
| Q |
318 |
cctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
||| || ||||||||||| ||||||| |||||||||| ||||||| | || ||||||||||||||| |||||||||| |
|
|
| T |
11273407 |
ccttaagactcaatatgtttaaggtgattgtcattgacagggacactgctgtgatgaatgttgttggcaaagttctc |
11273483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 81 - 394
Target Start/End: Complemental strand, 14218281 - 14217961
Alignment:
| Q |
81 |
aaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtt-------tttcgaccattttagtcatggactttacttata |
173 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| |||| | |||||| |||| || |||| || ||||| |||| |||||||||| ||||| | |
|
|
| T |
14218281 |
aaaccactcttaaagacatattttttgctcatccggaggcaattaatatgcttaatagttaacacttttccgaccgttttggtcatggactccacttaca |
14218182 |
T |
|
| Q |
174 |
aaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaata |
273 |
Q |
| |
|
||| ||| | || ||||| | |||||| ||||||||||||| | ||||||||||||||||||||| |||| |||| |||||||| ||| |||| || | |
|
|
| T |
14218181 |
aaaccaatttctaccgaatgtcgttatttgagattgttggtgtcatctctaccaacatgacatattccgttggttttgcctttctttcctttgaacaaga |
14218082 |
T |
|
| Q |
274 |
gagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatg |
373 |
Q |
| |
|
| ||| ||||||| || | | |||||||||||||||||| | |||| ||||||| ||| |||| |||||| |||| | | | ||||| || ||||| |
|
|
| T |
14218081 |
ggataactttacttgggcacttgggatgttggttggtcttttgttctcataactcaacatgcctaatgtggttatcatcaacaagaacaatgctatgatg |
14217982 |
T |
|
| Q |
374 |
aatgttgttgccaaagttctc |
394 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
14217981 |
aatgtcgttgccaaagttctc |
14217961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 394
Target Start/End: Complemental strand, 762071 - 761696
Alignment:
| Q |
18 |
aatatttggttacggagttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctgga |
117 |
Q |
| |
|
|||| ||| |||| ||||||||||||||| |||| || | ||||||||| | ||| | ||| ||||||| ||||||||| |||| |||||||| | | |
|
|
| T |
762071 |
aatacttgattacagagttggagaagcatcgatatgtctacttcacaagagctaatagcgaggaaaccacacttgaagatttattctttgctcaaccaaa |
761972 |
T |
|
| Q |
118 |
gtctattaatttgctaaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgtt |
217 |
Q |
| |
|
|| ||| || |||| |||| |||| | ||| |||| |||||||||| || || |||| |||| || ||||||| |||||| ||||||| |||| |
|
|
| T |
761971 |
atcaattgatatgctcaaca-ttttgccaccgttttggtcatggactccacctacaaaaccaataccaatcgaatgcctttatttgtgattgttagtgtc |
761873 |
T |
|
| Q |
218 |
acctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttat |
317 |
Q |
| |
|
||||||||||| | || ||||| ||||| ||| |||||||| ||| ||||| | ||| ||| || | | | | |||||||||||||||||||| |
|
|
| T |
761872 |
acctctaccaaatttacctattcggttgcgtttgcctttctttcctttgaaacagagaataacttcatatggacacttgagatgttggttggtcttttga |
761773 |
T |
|
| Q |
318 |
cctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
|||||||| ||| ||| |||||||| ||||||| ||||||||| || ||||||| || |||||| |||||||| |
|
|
| T |
761772 |
cctcaaaaaacaacatgcctaaggtgattgtcatcgatagggaccccgctttgatgaaagtcgttgccgaagttctc |
761696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 20245407 - 20245521
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
|||||||| ||||||||| || ||||| ||||| ||||| ||||| |||||||||||||||| |||| | || |||||| |||||| |||||| |||| |
|
|
| T |
20245407 |
agttggaggggcataaatacgtctatttcgcaagagcaaatagtgaggaaaccactcttgaagacatatatatttctcatccggagtcaattaatatgct |
20245506 |
T |
|
| Q |
133 |
aaacagtttttcgac |
147 |
Q |
| |
|
|||| |||| |||| |
|
|
| T |
20245507 |
taacacttttccgac |
20245521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 20886645 - 20886552
Alignment:
| Q |
44 |
cataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaaca |
137 |
Q |
| |
|
||||||||| || ||| ||||||| ||| ||||| |||||||||||||||| || ||||| ||||||| |||||| ||||| ||||| |||| |
|
|
| T |
20886645 |
cataaatatgtctattacacaagatgcaatagtgaggaaaccactcttgaagacatctttttggctcatccggagtcaattaaattgctcaaca |
20886552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 9e-77; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 33 - 393
Target Start/End: Complemental strand, 21401929 - 21401568
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaac-cactcttgaagatatattttttgctcatctggagtctattaatttgc |
131 |
Q |
| |
|
||||||| |||||||||||||| |||||| ||||| |||||||||| ||| |||| || |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
21401929 |
agttggaagagcataaatatatctatttcataagaataaattgtgaggaaaaacacttttaaagatatactttttgctcatctggagtctattaatatgc |
21401830 |
T |
|
| Q |
132 |
taaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacat |
231 |
Q |
| |
|
| |||| |||| ||| | ||| |||||| || | ||||| |||| |||||| | ||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
21401829 |
ttaacacttttccgaacgtttcagtcatcgattccacttacaaaaccaatatgaacagaatgccattatttgagattgttggtgtttcctctaccaacat |
21401730 |
T |
|
| Q |
232 |
gacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaat |
331 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||| || |||| | |||| |||| | ||||| |||||||||||||||| |||||| ||| |
|
|
| T |
21401729 |
gacatattatgttgctttttcctttcttgtctacgaaaaaaagtgtaactatactagggttctggagataatggttggtcttttatcgtcaaaagaaaat |
21401630 |
T |
|
| Q |
332 |
atgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttct |
393 |
Q |
| |
|
||| ||||||| ||||||||||| | |||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
21401629 |
atgcctaaggtagttgtcattgacaaggacaatactctgatgaatgttattgccaatgttct |
21401568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 33 - 393
Target Start/End: Complemental strand, 21796422 - 21796061
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaac-cactcttgaagatatattttttgctcatctggagtctattaatttgc |
131 |
Q |
| |
|
||||||| |||||||||||||| |||||| ||||| |||||||||| ||| |||| || |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
21796422 |
agttggaagagcataaatatatctatttcataagaataaattgtgaggaaaaacacttttaaagatatactttttgctcatctggagtctattaatatgc |
21796323 |
T |
|
| Q |
132 |
taaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacat |
231 |
Q |
| |
|
| |||| |||| ||| | ||| |||||| || | ||||| |||| |||||| | ||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
21796322 |
ttaacacttttccgaacgtttcagtcatcgattccacttacaaaaccaatatgaacagaatgccattatttgagattgttggtgtttcctctaccaacat |
21796223 |
T |
|
| Q |
232 |
gacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaat |
331 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||| || |||| | |||| |||| | ||||| |||||||||||||||| |||||| ||| |
|
|
| T |
21796222 |
gacatattatgttgctttttcctttcttgtctacgaaaaaaagtgtaactatactagggttctggagataatggttggtcttttatcgtcaaaagaaaat |
21796123 |
T |
|
| Q |
332 |
atgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttct |
393 |
Q |
| |
|
||| ||||||| ||||||||||| | |||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
21796122 |
atgcctaaggtagttgtcattgacaaggacaatactctgatgaatgttattgccaatgttct |
21796061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 44 - 394
Target Start/End: Original strand, 10363260 - 10363610
Alignment:
| Q |
44 |
cataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagttttt |
143 |
Q |
| |
|
||||||||| || |||||| |||||||||| |||| |||||||||||||||| |||| | |||||||||| |||||||||||| |||| |||| |||| |
|
|
| T |
10363260 |
cataaatatgtctatttcaaaagaacaaatgatgaggaaaccactcttgaagacatatgtcttgctcatctagagtctattaatatgcttaacacttttc |
10363359 |
T |
|
| Q |
144 |
cgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgt |
243 |
Q |
| |
|
| ||| |||| |||||||| | ||||| ||| || |||| | ||||||||||||| | |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10363360 |
caaccgttttggtcatggattccacttactaaaccaacttgtacataatgccattatttgatattgttggtgttacctctaccaacatgacatattatgt |
10363459 |
T |
|
| Q |
244 |
tgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtg |
343 |
Q |
| |
|
||||||| |||||||||| | | | ||| | |||| ||||||| |||| | ||||||||||||| |||||| | ||||||||||| |||||||||||| |
|
|
| T |
10363460 |
tgcttttgcctttcttgcatataataaagaaggtaactttacttgggttcttgagatgttggttgctcttttgtaatcaaaactcaacatgtctaaggtg |
10363559 |
T |
|
| Q |
344 |
gttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
||||||| |||||| |||||| |||||||||||||||| |||||||||||| |
|
|
| T |
10363560 |
gttgtcactgatagagacaatgctctgatgaatgttgtagccaaagttctc |
10363610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 312
Target Start/End: Complemental strand, 18327706 - 18327427
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaac-cactcttgaagatatattttttgctcatctggagtctattaatttgc |
131 |
Q |
| |
|
|||||||||| ||||||||| || |||||||||||| ||||||||| ||| || |||| |||| | |||||||||| ||| ||||||||||||||| |
|
|
| T |
18327706 |
agttggagaaacataaatatgtctatttcacaagaataaattgtgaaaaaaatcattctttaagacaaattttttgcttatccaaagtctattaatttgc |
18327607 |
T |
|
| Q |
132 |
taaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacat |
231 |
Q |
| |
|
| |||| || | ||||| |||| |||||||| | |||||||||| || |||| | ||||||||||||| |||| |||||||||||||||||| ||| |
|
|
| T |
18327606 |
ttaacacttatccgaccgttttggtcatggattccacttataaaaccaacttgtacataatgccattatttgagatagttggtgttacctctacctacaa |
18327507 |
T |
|
| Q |
232 |
gacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtct |
312 |
Q |
| |
|
|||| ||| |||||||||| | |||||| ||||||||||| || |||| ||||||| | || | ||||||||||||||||| |
|
|
| T |
18327506 |
gacacattatgttgcttttgcttttctttcctctgaaaaagagggtaactttactt-gtttctagagatgttggttggtct |
18327427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 34 - 394
Target Start/End: Complemental strand, 13867476 - 13867117
Alignment:
| Q |
34 |
gttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgcta |
133 |
Q |
| |
|
||||||| ||||| ||||| || ||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||| |||||| || || || | |
|
|
| T |
13867476 |
gttggaggagcattaatatgtctatttcacaagatcaaatagtgatgaaaccactcttaaagatatattttttgctcatccggagtcggttgatatgttt |
13867377 |
T |
|
| Q |
134 |
aacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatga |
233 |
Q |
| |
|
|||| |||||||||| |||| |||||||||| ||||| || | || | || ||||||| ||||| ||||| ||||||| ||||||||||| |||| |
|
|
| T |
13867376 |
aacactttttcgaccgttttggtcatggactccacttacaacaccgatttctaccgaatgccgctatttgagattattggtgtcacctctaccaaaatga |
13867277 |
T |
|
| Q |
234 |
catattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaatat |
333 |
Q |
| |
|
||||||| |||| |||| ||||||| ||| || | | || || ||||||| || | || ||||||||||||||||| |||||||||| || || |
|
|
| T |
13867276 |
catattcagttggttttgactttctttcctttg-accagaggacaactttacttgggcacttgaaatgttggttggtcttttgacctcaaaactaaacat |
13867178 |
T |
|
| Q |
334 |
gtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
| ||||||||||||||| |||||| |||| || ||| ||||||||||| |||||||||| |
|
|
| T |
13867177 |
gcctaaggtggttgtcaccgataggcacaaccctttgaagaatgttgttgtcaaagttctc |
13867117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 22675049 - 22675180
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
|||||| | ||||||||||| || ||| |||||| ||| ||||| |||| ||||||||||| |||||||||||||||| |||||| ||||| ||||| |
|
|
| T |
22675049 |
agttggtggagcataaatatgtctattacacaagttgcaatagtgaggaaactactcttgaagacatattttttgctcatccggagtcaattaaattgct |
22675148 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
|||| |||||||||| |||| |||||||||| |
|
|
| T |
22675149 |
caacactttttcgaccgttttggtcatggact |
22675180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 27677135 - 27677037
Alignment:
| Q |
296 |
gagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
||||||| |||||||||| | |||||||||||||||| ||| ||| |||||||||| ||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
27677135 |
gagatgtaggttggtcttctgaactcaaaactcaatatgcttaaagtgattgtcattgacagggacactactcttatgaatgttgttgccaaagttctc |
27677037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 361
Target Start/End: Original strand, 34277711 - 34277882
Alignment:
| Q |
190 |
aatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttag |
289 |
Q |
| |
|
|||||| |||||| ||||||||||||| ||||||||||| |||| ||||| ||||| ||| |||||||| ||| ||||| | | | ||| || | | | |
|
|
| T |
34277711 |
aatgcctttatttgagattgttggtgtcacctctaccaaattgacctattcggttgcgtttgcctttctttcctttgaaagagaaaataacttcatatgg |
34277810 |
T |
|
| Q |
290 |
gttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggac |
361 |
Q |
| |
|
| |||||||||||||||||||| ||||||| ||| ||| |||||||| |||||| |||||||||| |
|
|
| T |
34277811 |
acacttgagatgttggttggtcttttgaactcaaaaaacaacatgcctaaggtgattgtcactgatagggac |
34277882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 45346825 - 45346783
Alignment:
| Q |
296 |
gagatgttggttggtcttttatcctcaaaactcaatatgtcta |
338 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
45346825 |
gagatgttggttggtcttttgtcctcaaaactcaacatgtcta |
45346783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 24621296 - 24621223
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatatttttt |
106 |
Q |
| |
|
|||||||| ||||||||||| | |||| |||||| ||||| ||||| |||||||||| ||||| ||||||||| |
|
|
| T |
24621296 |
agttggaggagcataaatatgtttatttaacaagatcaaatggtgaggaaaccactctcgaagacatatttttt |
24621223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 15895669 - 15895613
Alignment:
| Q |
189 |
gaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttg |
245 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||||| ||||| |||| ||||| |
|
|
| T |
15895669 |
gaatgccgttatttgagattgttggtgtcacctctaccaaaatgacgtattatgttg |
15895613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 33 - 394
Target Start/End: Complemental strand, 12169588 - 12169226
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
||||||||||||||||||| || |||||||||| ||||| ||||| |||||||||||||||| ||||||||| |||||||||||| |||||| || | |
|
|
| T |
12169588 |
agttggagaagcataaatacgtctatttcacaagtgcaaatagtgaggaaaccactcttgaagacttattttttgttcatctggagtcaattaatatgtt |
12169489 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatg |
232 |
Q |
| |
|
|||| |||| | |||||||| |||||||||| ||||| |||| |||| | | |||| | || ||| ||||||||||||||||||||||||| ||| |
|
|
| T |
12169488 |
taacacttttcccaccattttggtcatggactccacttacaaaaccaatacctgtcaaatgtcgttgtttgagattgttggtgttacctctaccaaaatg |
12169389 |
T |
|
| Q |
233 |
acatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctc-aaaactcaat |
331 |
Q |
| |
|
|| |||| ||||| ||| ||||||| ||| |||| || ||| ||| ||||||| || || ||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
12169388 |
acgtattgggttgcgtttgtctttctttcctttgaacaagagaataaatttacttgggcaattgagattatggttggtcttttgacctcaaaaactcaac |
12169289 |
T |
|
| Q |
332 |
atgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
|| ||||||||||||||| |||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
12169288 |
atccctaaggtggttgtcaccgatagggacaccgctttgatgaatgttgttgccaaagttctc |
12169226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 57 - 394
Target Start/End: Original strand, 2835791 - 2836133
Alignment:
| Q |
57 |
atttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatt----tgctaaacagtttttcgaccattt |
152 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||||| | |||| || | |||| |||| | ||| ||| |
|
|
| T |
2835791 |
atttcacaagaacaaatgatgaggaaaccactcttgaagacatattttttgctcatagagagtcagtcaattcatatgtttaacacttttccaaccgttt |
2835890 |
T |
|
| Q |
153 |
tagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttc |
252 |
Q |
| |
|
| ||||||| || ||||| |||| ||| |||| | ||||||||||||| | ||||||||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
2835891 |
tggtcatgggctccacttacaaaatcaatttgtacataatgccattatttgatattgttggtgtcacatctaccaacatgacatattctgttggttttat |
2835990 |
T |
|
| Q |
253 |
ctttcttgcctctgaaaaatagagtaattttacttaggttatc-gagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcat |
351 |
Q |
| |
|
|||||||| || | ||||| || ||| ||||||| || | | ||||||||||| |||||| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
2835991 |
ctttcttgtctttcaaaaagaggataactttacttggggactttgggatgttggttgatcttttgtcctcaaaactcaacatgcataaggtggttgtcat |
2836090 |
T |
|
| Q |
352 |
tgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
||| ||||||||| |||||||| ||||||||| |||||||||| |
|
|
| T |
2836091 |
tgaaagggacaatgctctgatggatgttgttgtcaaagttctc |
2836133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 115 - 376
Target Start/End: Complemental strand, 23559031 - 23558770
Alignment:
| Q |
115 |
ggagtctattaatttgctaaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggt |
214 |
Q |
| |
|
|||||| |||||| |||| |||| |||| | ||| |||| |||||||||| ||||| |||| |||| | || ||||| | |||||| | ||||||||| |
|
|
| T |
23559031 |
ggagtcaattaatatgcttaacacttttccaaccgttttggtcatggactccacttacaaaactaatttctagcgaatgtcgttatttgatattgttggt |
23558932 |
T |
|
| Q |
215 |
gttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttt |
314 |
Q |
| |
|
|| ||||||||||| | ||||||||| |||| |||| |||||||| || |||| || | ||| ||||||| || | ||||||||||||||||||| |
|
|
| T |
23558931 |
gtcacctctaccaaaaagacatattccgttggttttgcctttcttttctttgaacaagcggataactttacttgggcacttgagatgttggttggtcttt |
23558832 |
T |
|
| Q |
315 |
tatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaat |
376 |
Q |
| |
|
| |||| ||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
23558831 |
tgtccttaaaactcaacatgtcaaaggtggttgtcactgatagagacaatactctgatgaat |
23558770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 4282001 - 4282090
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
||||| |||||||| ||||||| ||||||||||||||||||||||| ||||| ||||| |||| |||| ||||| |||| |||||||||| |
|
|
| T |
4282001 |
gtgaggaaaccactattgaagacatattttttgctcatctggagtcaattaaattgctcaacacttttccgaccgttttggtcatggact |
4282090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 44223143 - 44223232
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
||||| |||||||||||||||| || ||||||||||||| |||||| ||||| ||||| |||| |||| | ||| |||| |||||||||| |
|
|
| T |
44223143 |
gtgaggaaaccactcttgaagacatcttttttgctcatccggagtcaattaaattgctcaacacttttccaaccgttttggtcatggact |
44223232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 23942507 - 23942594
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattttagtcatgga |
162 |
Q |
| |
|
||||| |||||||||||||||| || ||||||||||||| |||||| |||| ||||| |||| |||| ||||| |||| |||||||| |
|
|
| T |
23942507 |
gtgaggaaaccactcttgaagacatcttttttgctcatccagagtctgttaaattgctcaacacttttccgaccgttttggtcatgga |
23942594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 13069463 - 13069389
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttg |
107 |
Q |
| |
|
|||| ||||| |||||||| || ||||||||||| |||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
13069463 |
agtttgagaaacataaatacgtctatttcacaagagaaaatagtgaggaaaccactcttgaagatatattttttg |
13069389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 11357501 - 11357590
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
||||| |||||||||||||||| || ||||||||||||| ||||| ||||| ||||| |||| |||| | ||| |||| |||||||||| |
|
|
| T |
11357501 |
gtgaggaaaccactcttgaagacatcttttttgctcatccagagtcaattaaattgctcaacacttttccaaccgttttggtcatggact |
11357590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 33 - 388
Target Start/End: Original strand, 30530029 - 30530383
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
|||| ||| |||||||||| || ||||||||| | ||||| ||||| |||||||| ||||||| |||||||| ||| ||| |||||| ||||| |||| |
|
|
| T |
30530029 |
agttagaggagcataaatacgtctatttcacaaaagcaaatagtgagaaaaccacttttgaagacatattttt-gcttatccggagtcggttaatatgct |
30530127 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatg |
232 |
Q |
| |
|
|||| |||| ||||| |||| |||||||||| ||||| |||| ||| || ||||||| |||||| ||||||||||||| ||||||||||| ||| |
|
|
| T |
30530128 |
taacacttttccgaccgttttggtcatggactccacttacaaaatcgatacctactgaatgccgttatttgagattgttggtgtcacctctaccaaaatg |
30530227 |
T |
|
| Q |
233 |
acatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaata |
332 |
Q |
| |
|
|||||||| ||||||||||| |||||| ||| | || || || ||| ||||||| || | ||||||||||||||||||| ||||||||| || | |
|
|
| T |
30530228 |
acatattccgttgctttttcatttctttcctttaaacaagaggataactttacttgggcacttgagatgttggttggtctttagacctcaaaacctaaca |
30530327 |
T |
|
| Q |
333 |
tgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaa |
388 |
Q |
| |
|
|| |||||||||||||| ||||||||||| || |||||||||| ||||||||| |
|
|
| T |
30530328 |
tgcctaaggtggttgtccccgatagggacaacgctttgatgaatgtcgttgccaaa |
30530383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 20517012 - 20516923
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||| |||||| | ||| ||||| |||| |||||||||| |||| |||||||||| |
|
|
| T |
20517012 |
gtgaggaaaccactcttgaagacatattttttgctcatccggagtcaagtaaattgctcaacactttttcgaccgttttggtcatggact |
20516923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 269
Target Start/End: Original strand, 35996849 - 35997085
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
|||||||||||||| ||||| || | ||||||||| | ||| | ||| ||||||| ||||||||| || | |||||||| ||| | || | | || |||| |
|
|
| T |
35996849 |
agttggagaagcatcaatatgtctacttcacaagagctaatagcgaggaaaccacacttgaagatttagtctttgctcacctgaaatcaactgatatgct |
35996948 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatg |
232 |
Q |
| |
|
|||| |||| | ||| |||| |||||||||| || || |||| |||| || ||||||| ||| || ||||||||||||| ||||||||||| || |
|
|
| T |
35996949 |
caacacttttcccaccgttttggtcatggactccacctacaaaaccaatacctaccgaatgcctttagttgagattgttggtgtcacctctaccaaattg |
35997048 |
T |
|
| Q |
233 |
acatattctgttgctttttcctttcttgcctctgaaa |
269 |
Q |
| |
|
|| ||||| ||||| ||| |||||||| ||| ||||| |
|
|
| T |
35997049 |
acctattcggttgcgtttgcctttctttcctttgaaa |
35997085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 30932786 - 30932666
Alignment:
| Q |
44 |
cataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagttttt |
143 |
Q |
| |
|
||||||||| || ||| ||||||| ||| ||||| |||||||| ||||||| || ||||||||||||| |||||| ||||| ||||| |||| ||| |
|
|
| T |
30932786 |
cataaatatgtctattacacaagatgcaatagtgaggaaaccactattgaagacatcttttttgctcatccggagtcaattaaattgctcaacacctttc |
30932687 |
T |
|
| Q |
144 |
cgaccattttagtcatggact |
164 |
Q |
| |
|
||||| |||| |||||||||| |
|
|
| T |
30932686 |
cgaccgttttggtcatggact |
30932666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 269
Target Start/End: Original strand, 19869350 - 19869587
Alignment:
| Q |
32 |
gagttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgc |
131 |
Q |
| |
|
|||| |||||||||| ||||| || | ||||||||| | ||| | ||| ||||||| ||||||||| |||| |||||||| | | || ||| || ||| |
|
|
| T |
19869350 |
gagtcggagaagcatcaatatgtctacttcacaagagctaatagcgaggaaaccacacttgaagatttattctttgctcacccaaaatcaattgatatgc |
19869449 |
T |
|
| Q |
132 |
taaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacat |
231 |
Q |
| |
|
| |||| | || | ||| |||| |||||||||| || || |||| |||| || ||||||| |||||| ||||||||||||| ||||||||||| | |
|
|
| T |
19869450 |
tcaacactcttcccaccgttttggtcatggactccacctacaaaaccaatacctaccgaatgcctttatttgagattgttggtgtcacctctaccaaatt |
19869549 |
T |
|
| Q |
232 |
gacatattctgttgctttttcctttcttgcctctgaaa |
269 |
Q |
| |
|
||| ||||| ||||| ||| | |||||| ||| ||||| |
|
|
| T |
19869550 |
gacctattcggttgcgtttgcatttctttcctttgaaa |
19869587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 394
Target Start/End: Complemental strand, 34085384 - 34085179
Alignment:
| Q |
189 |
gaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttactta |
288 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||||| || | ||||| |||| ||| |||||||| ||| ||||| | ||| ||| || | || |
|
|
| T |
34085384 |
gaatgcctttatttgagattgttggtgtcacctctaccaaattggcctattcgattgcgtttgcctttctttcctttgaaagagagaataacttcatata |
34085285 |
T |
|
| Q |
289 |
ggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaa |
388 |
Q |
| |
|
| | |||||||||||||||||||| |||||||| ||| ||| |||||||| ||| || ||||||||| || ||||||| || |||||| || |
|
|
| T |
34085284 |
gacacttgagatgttggttggtcttttgacctcaaaaaacaacatgcctaaggtgattgacaccgatagggaccccgctttgatgaaagtcgttgccgaa |
34085185 |
T |
|
| Q |
389 |
gttctc |
394 |
Q |
| |
|
|||||| |
|
|
| T |
34085184 |
gttctc |
34085179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 394
Target Start/End: Complemental strand, 39648519 - 39648314
Alignment:
| Q |
189 |
gaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttactta |
288 |
Q |
| |
|
||||||| |||||| ||||||||||| | ||||||||||| |||||| ||| ||||| ||| |||||||| ||| ||||| | ||| ||| || | | |
|
|
| T |
39648519 |
gaatgcctttatttgagattgttggtatcacctctaccaaattgacatgttcggttgcgtttgcctttctttcctttgaaagagagaataacttcatatg |
39648420 |
T |
|
| Q |
289 |
ggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaa |
388 |
Q |
| |
|
| | |||||||||||||||||||| |||||||| ||| ||| |||||||| || ||| ||||||||| || ||||||| || |||||| || |
|
|
| T |
39648419 |
gacacttgagatgttggttggtcttttgacctcaaaaaacaacatgcctaaggtgattatcaccgatagggaccccgctttgatgaaagtcgttgccgaa |
39648320 |
T |
|
| Q |
389 |
gttctc |
394 |
Q |
| |
|
|||||| |
|
|
| T |
39648319 |
gttctc |
39648314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 11918115 - 11918170
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttg |
130 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||||| | |||| ||||||||| |
|
|
| T |
11918115 |
gtgaggaaaccactcttaaagacatattttttgctcatccgaagtcaattaatttg |
11918170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 361
Target Start/End: Original strand, 35066670 - 35066841
Alignment:
| Q |
190 |
aatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttag |
289 |
Q |
| |
|
|||||| |||||| ||||||||||||| ||||||||||| |||| ||||| ||| | ||| | ||||| ||| ||||||| ||| ||| || | | | |
|
|
| T |
35066670 |
aatgcctttatttgagattgttggtgtcacctctaccaaattgacttattcggttacatttgcaattctttcctttgaaaaagagaataacttcatatgg |
35066769 |
T |
|
| Q |
290 |
gttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggac |
361 |
Q |
| |
|
| |||||||||||||||||||| |||||||| ||| ||| |||||||| |||||| ||||||||| |
|
|
| T |
35066770 |
acacttgagatgttggttggtcttttgacctcaaaaaacaacatgcctaaggtgattgtcaccgatagggac |
35066841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 394
Target Start/End: Original strand, 35001594 - 35001955
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||| ||||| | ||| |||||||||||||||| ||||||||||||||| | | || ||| || |||| |
|
|
| T |
35001594 |
agttggagaagcatcaatacatctatttcacaagagcaaatagcgaggaaaccactcttgaagacttattttttgctcatccgaattcaattgatatgct |
35001693 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatg |
232 |
Q |
| |
|
||| ||| | ||| |||| |||||||||| ||||| |||| |||| || |||| || |||||| ||||||||||||| |||||||| || ||| |
|
|
| T |
35001694 |
tgacacatttccaaccgttttggtcatggactccacttacaaaaccaatacctaccgaataccgttatttgagattgttggtgtcacctctacaaaaatg |
35001793 |
T |
|
| Q |
233 |
acatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaata |
332 |
Q |
| |
|
|| |||| ||||| ||| |||||||| ||| |||| || ||| ||| || |||| || | |||||||||||||||||||| ||||||||||||| | |
|
|
| T |
35001794 |
acgtatttggttgcgtttgcctttctttcctttgaacaagagaataacttcacttgggcacttgagatgttggttggtcttttgacctcaaaactcaaca |
35001893 |
T |
|
| Q |
333 |
tgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagttctc |
394 |
Q |
| |
|
|| ||||||||||||||| |||||||||| || |||||||||| ||| |||||||||| |
|
|
| T |
35001894 |
tgcctaaggtggttgtcactgatagggaccccgctttgatgaatgtcattggcaaagttctc |
35001955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 19988829 - 19988955
Alignment:
| Q |
145 |
gaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgtt |
244 |
Q |
| |
|
||||||||| |||||||| | ||||| |||| ||| | || | ||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||| |
|
|
| T |
19988829 |
gaccattttggtcatggattccacttacaaaaccaatttttacaaaatgccattatttgagattgttggtgtcacctctaccaacataacatattttgtt |
19988928 |
T |
|
| Q |
245 |
gctttttcctttcttgcctctgaaaaa |
271 |
Q |
| |
|
| |||| | ||||| |||||||||||| |
|
|
| T |
19988929 |
ggttttgcatttctcgcctctgaaaaa |
19988955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 19988968 - 19989032
Alignment:
| Q |
296 |
gagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgataggga |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| ||||| |
|
|
| T |
19988968 |
gagatgttggttggtcttttatcctcaaaactcaacattcataaggtggttgtcactgacaggga |
19989032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 394
Target Start/End: Complemental strand, 8275989 - 8275784
Alignment:
| Q |
189 |
gaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttactta |
288 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||||| |||| ||||| ||||| ||| | |||||| ||| ||||| | ||| ||| || | |
|
|
| T |
8275989 |
gaatgcctttatttgagattgttggtgtcacctctaccaaattgacctattcggttgcatttgcatttctttcctttgaaagagagaataacttcgtatg |
8275890 |
T |
|
| Q |
289 |
ggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaa |
388 |
Q |
| |
|
| | |||||||||||||||||||| |||||||| ||| ||| |||||||| |||||| |||||||||| || ||||||| | ||||||||| |
|
|
| T |
8275889 |
gacacttgagatgttggttggtctttttacctcaaaaaacaacatgcctaaggtgattgtcactgatagggaccccgctttgatgaaagccgttgccaaa |
8275790 |
T |
|
| Q |
389 |
gttctc |
394 |
Q |
| |
|
|||||| |
|
|
| T |
8275789 |
gttctc |
8275784 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 390
Target Start/End: Complemental strand, 13542643 - 13542289
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| |||| ||||| |||| |||||| || | ||||||||| |||||| | |||| ||||| |||| |
|
|
| T |
13542643 |
agttggagaagcataaatacgtctatttcacaagagaaaatagtgaggaaactactcttaaaaacatatttttt-ctcatccgaagtcaattaaaatgct |
13542545 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggactttacttataaaaataatatgtatagaatgccattatttaagattgttggtgttacctctaccaacatg |
232 |
Q |
| |
|
|||| | | | ||| |||| |||||||||| ||||| |||| |||| || ||||| | |||||| ||||| ||||||| ||||||||||| ||| |
|
|
| T |
13542544 |
taacactctacccaccgttttggtcatggactccacttacaaaaccaatacctaacgaatgtcgttatttgagattattggtgtcacctctaccaaaatg |
13542445 |
T |
|
| Q |
233 |
acatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttacttaggttatcgagatgttggttggtcttttatcctcaaaactcaata |
332 |
Q |
| |
|
|| ||||| |||| |||| || | | ||| |||| || ||| ||| ||||||| || | |||||||||||||||||||| ||||||||||||| | |
|
|
| T |
13542444 |
acgtattccgttggttttgtctgttt--cctttgaacaagagaataactttacttgggaacttgagatgttggttggtcttttgacctcaaaactcaaca |
13542347 |
T |
|
| Q |
333 |
tgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaagt |
390 |
Q |
| |
|
|| |||||||||||||||| ||||||||||| || ||||||||| ||||||||||| |
|
|
| T |
13542346 |
tgcctaaggtggttgtcatcgatagggacaacgctttgatgaatgccgttgccaaagt |
13542289 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 394
Target Start/End: Complemental strand, 31519164 - 31518959
Alignment:
| Q |
189 |
gaatgccattatttaagattgttggtgttacctctaccaacatgacatattctgttgctttttcctttcttgcctctgaaaaatagagtaattttactta |
288 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||||| ||| ||||| | ||| ||| || | | |
|
|
| T |
31519164 |
gaatgcctttatttgagattgttggtgtcacctctaccaaattgacatattcggttgcgtttgcctttctttcctttgaaagagagaataacttcatatg |
31519065 |
T |
|
| Q |
289 |
ggttatcgagatgttggttggtcttttatcctcaaaactcaatatgtctaaggtggttgtcattgatagggacaatactctgatgaatgttgttgccaaa |
388 |
Q |
| |
|
| | | |||||||||||||||||||| |||||||| ||| ||| |||||||| |||||| ||||||||| || ||||||| || |||||| || |
|
|
| T |
31519064 |
gatacttgagatgttggttggtcttttgacctcaaaaaacaacatgcctaaggtgattgtcaccgatagggaccccgctttgatgaaagtcgttgccgaa |
31518965 |
T |
|
| Q |
389 |
gttctc |
394 |
Q |
| |
|
|||||| |
|
|
| T |
31518964 |
gttctc |
31518959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0632 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0632
Description:
Target: scaffold0632; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 2224 - 2093
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
||||||| ||||||||||| || ||||||||||| ||| | ||||| ||||||| |||||||| ||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
2224 |
agttggataagcataaatacgtctatttcacaagaccaattagtgaggaaaccacccttgaagacatattgtttgctcatctggagtcaattaatatgct |
2125 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
|||| |||| | ||| |||| |||||||||| |
|
|
| T |
2124 |
taacacttttcccaccgttttggtcatggact |
2093 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 12064697 - 12064828
Alignment:
| Q |
33 |
agttggagaagcataaatatatcaatttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgct |
132 |
Q |
| |
|
|||||| | ||||||||||| || ||| ||||||| ||| ||||| |||||||||||||||| || ||||||||||||| | |||| ||||| ||||| |
|
|
| T |
12064697 |
agttggtggagcataaatatgtctattacacaagatgcaatagtgaggaaaccactcttgaagacatcttttttgctcatccgaagtcaattaaattgct |
12064796 |
T |
|
| Q |
133 |
aaacagtttttcgaccattttagtcatggact |
164 |
Q |
| |
|
|||| ||| ||||| |||| |||||||||| |
|
|
| T |
12064797 |
caacacctttccgaccgttttggtcatggact |
12064828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0599 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0599
Description:
Target: scaffold0599; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 9866 - 9921
Alignment:
| Q |
75 |
gtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttg |
130 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||||| | |||| ||||||||| |
|
|
| T |
9866 |
gtgaggaaaccactcttaaagacatattttttgctcatccgaagtcaattaatttg |
9921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0156 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0156
Description:
Target: scaffold0156; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 18582 - 18667
Alignment:
| Q |
57 |
atttcacaagaacaaattgtgagcaaaccactcttgaagatatattttttgctcatctggagtctattaatttgctaaacagtttt |
142 |
Q |
| |
|
|||||||||||| ||||| |||| | |||||||||||| |||||||||||||||| | ||| || |||| |||| |||| |||| |
|
|
| T |
18582 |
atttcacaagaataaattatgagatattcactcttgaagacatattttttgctcatccgaagtttactaatatgcttaacattttt |
18667 |
T |
|
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