View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21266_low_48 (Length: 246)
Name: NF21266_low_48
Description: NF21266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21266_low_48 |
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Alignment Details
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 52243870 - 52243807
Alignment:
| Q |
18 |
ctatggtcatttgaaactatagctagctagctcatgtaccgattccccaatatataccactact |
81 |
Q |
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| T |
52243870 |
ctatggtcatttgaaactatagctagctagctcatgtacggattccccaatatataccactact |
52243807 |
T |
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