View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21268_low_4 (Length: 315)

Name: NF21268_low_4
Description: NF21268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21268_low_4
NF21268_low_4
[»] chr1 (78 HSPs)
chr1 (18-165)||(34756429-34756576)
chr1 (26-162)||(50005084-50005220)
chr1 (25-162)||(38277420-38277557)
chr1 (18-162)||(15034664-15034808)
chr1 (18-129)||(32572960-32573071)
chr1 (18-129)||(40264068-40264179)
chr1 (25-159)||(44410319-44410453)
chr1 (25-162)||(4038092-4038229)
chr1 (18-159)||(28745805-28745945)
chr1 (18-162)||(27804275-27804419)
chr1 (26-162)||(15034677-15034813)
chr1 (46-162)||(45565399-45565515)
chr1 (32-129)||(37214843-37214939)
chr1 (18-162)||(4038080-4038224)
chr1 (18-129)||(23536077-23536188)
chr1 (18-163)||(28745807-28745951)
chr1 (18-162)||(34756437-34756581)
chr1 (46-137)||(5474437-5474528)
chr1 (28-129)||(27935523-27935624)
chr1 (46-162)||(23536072-23536188)
chr1 (18-162)||(38277425-38277568)
chr1 (18-162)||(50005089-50005233)
chr1 (83-162)||(8224773-8224852)
chr1 (83-162)||(24273209-24273288)
chr1 (19-94)||(25889169-25889243)
chr1 (83-162)||(28632575-28632653)
chr1 (26-162)||(27804270-27804406)
chr1 (83-162)||(26501068-26501147)
chr1 (18-97)||(30190206-30190285)
chr1 (46-162)||(40264068-40264184)
chr1 (83-158)||(37448390-37448465)
chr1 (80-162)||(6470672-6470754)
chr1 (92-162)||(30190220-30190290)
chr1 (80-162)||(31166315-31166397)
chr1 (85-162)||(37036940-37037017)
chr1 (46-158)||(32572960-32573072)
chr1 (83-158)||(44570687-44570762)
chr1 (18-129)||(45565404-45565515)
chr1 (83-162)||(47165201-47165280)
chr1 (80-162)||(43622964-43623046)
chr1 (50-129)||(17502222-17502301)
chr1 (83-162)||(49659222-49659300)
chr1 (83-160)||(37447891-37447968)
chr1 (18-74)||(37036956-37037012)
chr1 (18-162)||(44410321-44410465)
chr1 (83-150)||(946930-946997)
chr1 (95-162)||(32287934-32288001)
chr1 (83-162)||(39887132-39887211)
chr1 (92-162)||(27935569-27935639)
chr1 (88-150)||(29446767-29446828)
chr1 (46-144)||(37214842-37214939)
chr1 (18-83)||(8224778-8224843)
chr1 (80-129)||(15245480-15245529)
chr1 (18-83)||(24273218-24273283)
chr1 (83-162)||(946381-946458)
chr1 (80-162)||(10166504-10166586)
chr1 (83-149)||(31195474-31195540)
chr1 (26-83)||(6470684-6470741)
chr1 (83-140)||(15467952-15468009)
chr1 (26-83)||(26501077-26501134)
chr1 (18-83)||(28632584-28632648)
chr1 (18-75)||(31166320-31166377)
chr1 (26-83)||(31195474-31195531)
chr1 (18-83)||(37448399-37448464)
chr1 (80-137)||(47541974-47542031)
chr1 (92-156)||(25889169-25889232)
chr1 (46-125)||(17502222-17502301)
chr1 (83-162)||(34003382-34003461)
chr1 (32-83)||(47165210-47165261)
chr1 (83-162)||(51847857-51847935)
chr1 (25-71)||(29446767-29446813)
chr1 (83-149)||(32647319-32647385)
chr1 (83-129)||(37447348-37447394)
chr1 (25-83)||(37447900-37447958)
chr1 (83-129)||(44571239-44571285)
chr1 (50-96)||(47074177-47074223)
chr1 (84-129)||(32128068-32128113)
chr1 (18-83)||(44570688-44570753)
[»] chr4 (75 HSPs)
chr4 (25-162)||(15660200-15660337)
chr4 (18-159)||(10127984-10128125)
chr4 (18-155)||(42844555-42844692)
chr4 (18-129)||(26250919-26251030)
chr4 (18-163)||(28845875-28846020)
chr4 (18-162)||(7352817-7352961)
chr4 (18-140)||(857266-857388)
chr4 (26-162)||(41498494-41498631)
chr4 (32-159)||(1107076-1107203)
chr4 (18-162)||(7352822-7352966)
chr4 (70-162)||(36455912-36456004)
chr4 (25-129)||(11040984-11041088)
chr4 (50-162)||(14982285-14982396)
chr4 (18-162)||(15660188-15660332)
chr4 (35-162)||(857266-857393)
chr4 (18-162)||(4896658-4896786)
chr4 (46-162)||(26250914-26251030)
chr4 (26-162)||(28845889-28846025)
chr4 (18-106)||(49111373-49111461)
chr4 (83-162)||(31473854-31473933)
chr4 (18-162)||(10127979-10128123)
chr4 (83-162)||(10633037-10633116)
chr4 (92-162)||(49111396-49111466)
chr4 (18-162)||(1107056-1107201)
chr4 (83-159)||(1539649-1539725)
chr4 (46-162)||(4441342-4441449)
chr4 (83-162)||(2125862-2125941)
chr4 (20-162)||(42844555-42844697)
chr4 (93-162)||(1112610-1112679)
chr4 (94-162)||(11040973-11041040)
chr4 (18-162)||(4896653-4896781)
chr4 (50-96)||(46724195-46724241)
chr4 (83-140)||(29091164-29091221)
chr4 (89-162)||(36456007-36456080)
chr4 (93-162)||(41498575-41498644)
chr4 (83-147)||(35470142-35470206)
chr4 (90-161)||(1112704-1112775)
chr4 (83-162)||(16516176-16516255)
chr4 (96-162)||(5715749-5715815)
chr4 (98-159)||(11348327-11348388)
chr4 (26-77)||(31742794-31742845)
chr4 (83-142)||(41139498-41139557)
chr4 (83-161)||(9451121-9451199)
chr4 (83-137)||(26534523-26534577)
chr4 (18-83)||(2125867-2125932)
chr4 (85-162)||(55266852-55266929)
chr4 (18-78)||(1112615-1112675)
chr4 (26-78)||(1539659-1539711)
chr4 (18-78)||(10633042-10633102)
chr4 (83-159)||(19461725-19461801)
chr4 (18-78)||(31473859-31473919)
chr4 (84-135)||(16300209-16300260)
chr4 (119-162)||(31742875-31742918)
chr4 (83-162)||(46242533-46242612)
chr4 (92-162)||(467887-467955)
chr4 (18-108)||(36455917-36456007)
chr4 (120-162)||(42542979-42543021)
chr4 (83-129)||(42775643-42775689)
chr4 (18-74)||(5715754-5715810)
chr4 (81-149)||(12169037-12169104)
chr4 (98-162)||(31742781-31742845)
chr4 (26-65)||(4441355-4441394)
chr4 (18-65)||(11348339-11348386)
chr4 (70-129)||(12914060-12914119)
chr4 (26-125)||(14982298-14982396)
chr4 (34-77)||(21012499-21012542)
chr4 (83-162)||(42776642-42776721)
chr4 (54-96)||(32724961-32725003)
chr4 (132-162)||(47108323-47108353)
chr4 (83-129)||(53760779-53760825)
chr4 (18-83)||(1112706-1112771)
chr4 (91-148)||(10354361-10354418)
chr4 (18-74)||(19461743-19461799)
chr4 (35-83)||(29091164-29091212)
chr4 (83-161)||(31947596-31947675)
[»] chr8 (71 HSPs)
chr8 (18-162)||(3853621-3853765)
chr8 (18-162)||(3858079-3858223)
chr8 (18-150)||(13404837-13404969)
chr8 (18-162)||(17110879-17111023)
chr8 (32-162)||(17110874-17111004)
chr8 (33-162)||(33902672-33902801)
chr8 (25-162)||(40046809-40046932)
chr8 (18-162)||(3853626-3853770)
chr8 (18-162)||(3858084-3858228)
chr8 (46-162)||(14799999-14800114)
chr8 (83-162)||(24044965-24045044)
chr8 (50-129)||(42739969-42740048)
chr8 (69-162)||(4156228-4156321)
chr8 (25-162)||(13404832-13404969)
chr8 (25-88)||(37268086-37268149)
chr8 (83-162)||(23011739-23011818)
chr8 (83-162)||(29257350-29257429)
chr8 (83-162)||(29482806-29482885)
chr8 (83-162)||(33377296-33377375)
chr8 (83-162)||(44346677-44346756)
chr8 (83-162)||(44889359-44889438)
chr8 (92-162)||(42711364-42711434)
chr8 (83-162)||(35979003-35979082)
chr8 (46-137)||(38573433-38573524)
chr8 (84-162)||(33986009-33986087)
chr8 (82-162)||(11744717-11744797)
chr8 (83-150)||(8049271-8049338)
chr8 (83-162)||(28324661-28324740)
chr8 (83-162)||(36103106-36103185)
chr8 (84-162)||(14244-14321)
chr8 (92-150)||(40046874-40046932)
chr8 (83-162)||(515531-515610)
chr8 (84-162)||(9982642-9982719)
chr8 (92-162)||(37268091-37268161)
chr8 (109-162)||(14991697-14991750)
chr8 (18-83)||(24044970-24045035)
chr8 (32-129)||(30435270-30435365)
chr8 (25-129)||(42711324-42711422)
chr8 (83-147)||(15186816-15186880)
chr8 (110-162)||(31807414-31807465)
chr8 (18-65)||(4156269-4156316)
chr8 (83-134)||(13144616-13144667)
chr8 (18-65)||(14800062-14800109)
chr8 (26-162)||(33902685-33902820)
chr8 (103-161)||(8689138-8689196)
chr8 (83-129)||(26520438-26520484)
chr8 (83-129)||(30444932-30444978)
chr8 (83-129)||(34008819-34008865)
chr8 (18-71)||(31807419-31807471)
chr8 (25-77)||(8049271-8049323)
chr8 (18-66)||(14991702-14991750)
chr8 (27-83)||(23011753-23011809)
chr8 (122-162)||(27322687-27322727)
chr8 (27-75)||(40046823-40046871)
chr8 (83-162)||(1088276-1088355)
chr8 (119-158)||(32626069-32626108)
chr8 (83-150)||(35404741-35404808)
chr8 (132-162)||(26520469-26520499)
chr8 (83-129)||(29611408-29611454)
chr8 (93-134)||(8689207-8689248)
chr8 (18-83)||(11744727-11744792)
chr8 (83-140)||(21465572-21465629)
chr8 (18-83)||(29257359-29257424)
chr8 (18-83)||(29482815-29482880)
chr8 (113-162)||(30435251-30435300)
chr8 (18-83)||(33377305-33377370)
chr8 (18-83)||(44346686-44346751)
chr8 (26-83)||(44889372-44889429)
chr8 (93-129)||(7202885-7202921)
chr8 (27-83)||(9982655-9982711)
chr8 (18-78)||(33986014-33986074)
[»] chr3 (78 HSPs)
chr3 (27-159)||(31070415-31070546)
chr3 (26-162)||(44692827-44692963)
chr3 (18-129)||(46429434-46429545)
chr3 (18-162)||(9129349-9129493)
chr3 (18-162)||(9137456-9137600)
chr3 (41-162)||(44436263-44436384)
chr3 (18-125)||(47284268-47284375)
chr3 (25-162)||(5415800-5415937)
chr3 (18-117)||(39215888-39215987)
chr3 (30-162)||(9129366-9129498)
chr3 (30-162)||(9137473-9137605)
chr3 (25-137)||(42130709-42130821)
chr3 (18-129)||(28092224-28092335)
chr3 (18-162)||(44692832-44692976)
chr3 (18-129)||(27251932-27252043)
chr3 (46-161)||(28092220-28092335)
chr3 (83-162)||(21307520-21307599)
chr3 (25-148)||(31070423-31070546)
chr3 (91-162)||(46672799-46672870)
chr3 (18-162)||(5415788-5415932)
chr3 (18-134)||(44436268-44436384)
chr3 (87-162)||(49457348-49457423)
chr3 (83-162)||(53129831-53129910)
chr3 (92-162)||(27251978-27252048)
chr3 (85-162)||(36397979-36398056)
chr3 (46-129)||(332012-332096)
chr3 (46-162)||(46429434-46429550)
chr3 (83-162)||(7302351-7302430)
chr3 (83-162)||(47767437-47767516)
chr3 (83-159)||(19475824-19475900)
chr3 (83-162)||(31189385-31189464)
chr3 (83-162)||(37054399-37054478)
chr3 (83-162)||(42005941-42006020)
chr3 (83-162)||(48947610-48947689)
chr3 (83-162)||(53470417-53470496)
chr3 (83-149)||(30766571-30766637)
chr3 (85-162)||(34088576-34088653)
chr3 (83-159)||(671607-671683)
chr3 (83-155)||(7976560-7976632)
chr3 (18-117)||(46672772-46672865)
chr3 (98-162)||(47284316-47284380)
chr3 (46-129)||(25655335-25655418)
chr3 (92-162)||(39110399-39110469)
chr3 (113-162)||(35279920-35279969)
chr3 (18-99)||(39110404-39110485)
chr3 (50-162)||(39215880-39215992)
chr3 (83-162)||(52527041-52527120)
chr3 (18-83)||(21307529-21307594)
chr3 (41-162)||(42130697-42130818)
chr3 (92-159)||(37321558-37321625)
chr3 (18-65)||(49457353-49457400)
chr3 (18-83)||(36397986-36398051)
chr3 (18-83)||(37321560-37321625)
chr3 (80-129)||(38506861-38506910)
chr3 (18-83)||(53129840-53129905)
chr3 (21-77)||(31189400-31189456)
chr3 (70-162)||(40929613-40929704)
chr3 (98-162)||(46635862-46635926)
chr3 (18-78)||(47767442-47767502)
chr3 (83-134)||(8762159-8762210)
chr3 (83-143)||(46706674-46706736)
chr3 (83-150)||(50168598-50168665)
chr3 (83-129)||(2104772-2104818)
chr3 (18-64)||(7302356-7302402)
chr3 (83-133)||(13176550-13176600)
chr3 (83-133)||(13339451-13339501)
chr3 (80-162)||(21730907-21730988)
chr3 (103-161)||(44288467-44288525)
chr3 (26-64)||(46001382-46001420)
chr3 (92-129)||(332012-332049)
chr3 (26-83)||(19475834-19475891)
chr3 (26-83)||(30766571-30766628)
chr3 (83-159)||(30767112-30767189)
chr3 (93-141)||(19475923-19475971)
chr3 (18-62)||(35279920-35279964)
chr3 (18-78)||(37054404-37054464)
chr3 (18-62)||(42005971-42006015)
chr3 (18-78)||(53470431-53470491)
[»] chr2 (74 HSPs)
chr2 (18-162)||(41461525-41461669)
chr2 (50-162)||(27033495-27033607)
chr2 (18-162)||(14365710-14365853)
chr2 (32-162)||(784817-784947)
chr2 (27-159)||(11716427-11716550)
chr2 (18-129)||(14537209-14537320)
chr2 (18-162)||(41461520-41461664)
chr2 (46-162)||(11684604-11684711)
chr2 (26-162)||(14365705-14365840)
chr2 (46-162)||(14537204-14537320)
chr2 (18-147)||(784813-784942)
chr2 (46-162)||(10244182-10244298)
chr2 (90-162)||(17180302-17180374)
chr2 (83-162)||(10480124-10480203)
chr2 (83-162)||(11532242-11532321)
chr2 (83-162)||(11793900-11793979)
chr2 (18-162)||(11716413-11716548)
chr2 (83-162)||(769041-769120)
chr2 (83-162)||(1583798-1583877)
chr2 (46-129)||(11824718-11824801)
chr2 (83-162)||(13017784-13017863)
chr2 (83-162)||(33189246-33189325)
chr2 (18-93)||(44256181-44256255)
chr2 (46-129)||(3345783-3345867)
chr2 (83-159)||(30698289-30698365)
chr2 (83-162)||(11141310-11141389)
chr2 (83-162)||(45094460-45094539)
chr2 (84-162)||(28740601-28740679)
chr2 (18-75)||(17180307-17180364)
chr2 (80-161)||(40026070-40026151)
chr2 (83-162)||(35047668-35047747)
chr2 (92-162)||(17905659-17905729)
chr2 (18-83)||(11532251-11532316)
chr2 (18-83)||(11793905-11793970)
chr2 (26-134)||(14954284-14954393)
chr2 (83-140)||(32839637-32839694)
chr2 (83-159)||(3092290-3092366)
chr2 (83-147)||(39630245-39630308)
chr2 (18-125)||(27033500-27033607)
chr2 (85-176)||(30751338-30751428)
chr2 (83-141)||(7167656-7167714)
chr2 (83-161)||(11606719-11606797)
chr2 (92-162)||(44256191-44256260)
chr2 (19-83)||(17905665-17905729)
chr2 (83-162)||(7228001-7228080)
chr2 (84-131)||(11607257-11607304)
chr2 (18-65)||(11684609-11684656)
chr2 (83-129)||(8736430-8736476)
chr2 (83-161)||(29279008-29279086)
chr2 (18-83)||(10480129-10480194)
chr2 (39-162)||(14954271-14954395)
chr2 (18-78)||(30698291-30698351)
chr2 (83-127)||(44255674-44255718)
chr2 (80-147)||(740724-740791)
chr2 (84-131)||(11595355-11595402)
chr2 (44-83)||(11595355-11595394)
chr2 (132-162)||(8736461-8736491)
chr2 (83-129)||(20935744-20935790)
chr2 (32-74)||(28740620-28740662)
chr2 (25-83)||(40026081-40026139)
chr2 (18-83)||(769046-769111)
chr2 (18-83)||(1583807-1583872)
chr2 (97-162)||(8735849-8735914)
chr2 (92-129)||(11684674-11684711)
chr2 (18-83)||(13017789-13017854)
chr2 (80-129)||(21504488-21504537)
chr2 (18-83)||(33189255-33189320)
chr2 (18-83)||(35047677-35047742)
chr2 (121-162)||(39477976-39478017)
chr2 (21-62)||(45094490-45094531)
chr2 (34-78)||(7167670-7167714)
chr2 (18-78)||(11141315-11141375)
chr2 (93-141)||(11532169-11532217)
chr2 (35-83)||(32839646-32839694)
[»] chr6 (29 HSPs)
chr6 (26-162)||(9763017-9763153)
chr6 (46-162)||(9285652-9285768)
chr6 (33-162)||(6919733-6919861)
chr6 (32-147)||(776104-776219)
chr6 (18-162)||(6919713-6919856)
chr6 (32-162)||(9763036-9763166)
chr6 (83-162)||(34244969-34245048)
chr6 (93-162)||(15299510-15299578)
chr6 (18-129)||(9285657-9285768)
chr6 (83-162)||(13487280-13487359)
chr6 (83-162)||(28918170-28918249)
chr6 (83-162)||(29889423-29889502)
chr6 (32-147)||(776100-776215)
chr6 (83-162)||(1368482-1368561)
chr6 (83-162)||(15832471-15832550)
chr6 (80-162)||(6358237-6358319)
chr6 (95-149)||(15299417-15299471)
chr6 (103-162)||(8574700-8574759)
chr6 (103-162)||(8574760-8574819)
chr6 (83-140)||(34364770-34364827)
chr6 (83-140)||(9697489-9697546)
chr6 (25-78)||(15299514-15299567)
chr6 (26-74)||(34244987-34245035)
chr6 (127-162)||(33733437-33733472)
chr6 (20-78)||(13487287-13487345)
chr6 (84-129)||(1195371-1195416)
chr6 (26-83)||(29889432-29889489)
chr6 (26-78)||(15299417-15299469)
chr6 (26-78)||(28918183-28918235)
[»] chr7 (64 HSPs)
chr7 (18-162)||(5644682-5644826)
chr7 (26-162)||(29065824-29065960)
chr7 (18-161)||(21635895-21636038)
chr7 (18-162)||(40110742-40110887)
chr7 (18-162)||(2057405-2057549)
chr7 (18-137)||(46069421-46069537)
chr7 (18-162)||(43955522-43955663)
chr7 (18-162)||(43955527-43955668)
chr7 (21-162)||(34388270-34388411)
chr7 (18-162)||(49052796-49052936)
chr7 (18-137)||(44915205-44915324)
chr7 (18-162)||(40110747-40110892)
chr7 (18-162)||(2057400-2057544)
chr7 (26-162)||(5644695-5644831)
chr7 (27-162)||(29065838-29065973)
chr7 (80-162)||(31632727-31632809)
chr7 (83-162)||(23455222-23455301)
chr7 (83-162)||(26162112-26162191)
chr7 (83-162)||(35776930-35777009)
chr7 (18-162)||(34388275-34388419)
chr7 (83-162)||(28539143-28539222)
chr7 (41-162)||(49052791-49052911)
chr7 (18-129)||(40854007-40854119)
chr7 (83-162)||(6498740-6498819)
chr7 (83-162)||(39342617-39342696)
chr7 (45-162)||(44915200-44915317)
chr7 (83-162)||(9784906-9784985)
chr7 (83-162)||(14603237-14603316)
chr7 (83-162)||(23548586-23548665)
chr7 (83-162)||(25189201-25189280)
chr7 (83-162)||(35455809-35455888)
chr7 (83-165)||(43791094-43791174)
chr7 (98-162)||(34398938-34399003)
chr7 (18-158)||(21635894-21636034)
chr7 (83-162)||(22391562-22391641)
chr7 (83-162)||(29639190-29639269)
chr7 (83-162)||(30629062-30629141)
chr7 (18-83)||(35776939-35777004)
chr7 (46-162)||(40854007-40854124)
chr7 (83-162)||(18789221-18789300)
chr7 (41-162)||(46069424-46069542)
chr7 (83-148)||(3905634-3905699)
chr7 (18-83)||(23455231-23455296)
chr7 (18-83)||(26162121-26162186)
chr7 (18-83)||(31632732-31632797)
chr7 (83-147)||(30524275-30524339)
chr7 (17-83)||(29639199-29639265)
chr7 (83-129)||(32650611-32650657)
chr7 (41-135)||(46481978-46482071)
chr7 (18-83)||(28539152-28539217)
chr7 (26-74)||(6498758-6498806)
chr7 (84-140)||(18789544-18789600)
chr7 (110-158)||(22351874-22351922)
chr7 (18-74)||(25189219-25189275)
chr7 (18-77)||(34398938-34398998)
chr7 (34-78)||(43791116-43791160)
chr7 (83-129)||(14790151-14790197)
chr7 (32-78)||(22391576-22391622)
chr7 (83-129)||(45984378-45984424)
chr7 (83-129)||(45988738-45988784)
chr7 (18-83)||(39342626-39342691)
chr7 (26-78)||(9784920-9784972)
chr7 (93-141)||(29639119-29639167)
chr7 (93-141)||(31632828-31632876)
[»] chr5 (87 HSPs)
chr5 (27-162)||(15373979-15374114)
chr5 (18-162)||(9764343-9764487)
chr5 (18-162)||(20523143-20523287)
chr5 (18-162)||(32389977-32390121)
chr5 (32-162)||(2316383-2316514)
chr5 (18-162)||(6634025-6634168)
chr5 (18-162)||(9764348-9764492)
chr5 (46-162)||(40643856-40643971)
chr5 (18-162)||(32389982-32390126)
chr5 (18-162)||(40809351-40809495)
chr5 (18-97)||(28828417-28828496)
chr5 (34-147)||(32470902-32471015)
chr5 (18-162)||(15373965-15374109)
chr5 (18-162)||(20523138-20523282)
chr5 (83-162)||(22766957-22767036)
chr5 (83-162)||(37722880-37722959)
chr5 (18-147)||(2316388-2316518)
chr5 (80-162)||(3563282-3563364)
chr5 (94-162)||(2721557-2721625)
chr5 (18-150)||(23091979-23092111)
chr5 (83-162)||(25935276-25935355)
chr5 (83-162)||(40090400-40090479)
chr5 (89-162)||(16515099-16515172)
chr5 (32-141)||(32470906-32471015)
chr5 (83-160)||(37145487-37145564)
chr5 (90-162)||(26281262-26281334)
chr5 (83-162)||(927307-927386)
chr5 (83-162)||(9894308-9894387)
chr5 (83-162)||(19533893-19533972)
chr5 (83-162)||(22303856-22303935)
chr5 (83-162)||(41762201-41762280)
chr5 (92-162)||(15804327-15804397)
chr5 (25-162)||(23091979-23092116)
chr5 (83-162)||(32250084-32250162)
chr5 (18-83)||(37722889-37722954)
chr5 (90-162)||(16515010-16515081)
chr5 (91-162)||(33245366-33245437)
chr5 (27-101)||(16515023-16515097)
chr5 (92-162)||(28828431-28828501)
chr5 (92-162)||(40809346-40809416)
chr5 (112-157)||(13243469-13243514)
chr5 (18-78)||(2721560-2721620)
chr5 (18-162)||(6634020-6634163)
chr5 (83-162)||(14834829-14834908)
chr5 (83-162)||(20320634-20320713)
chr5 (119-162)||(28828372-28828415)
chr5 (87-162)||(35379349-35379423)
chr5 (18-129)||(40643856-40643966)
chr5 (18-63)||(13243469-13243514)
chr5 (80-129)||(15270837-15270886)
chr5 (113-162)||(15804399-15804448)
chr5 (80-129)||(17542344-17542393)
chr5 (18-83)||(40090409-40090474)
chr5 (18-86)||(15804332-15804400)
chr5 (94-162)||(34982221-34982288)
chr5 (25-83)||(3563294-3563352)
chr5 (83-161)||(10314655-10314733)
chr5 (83-129)||(22305132-22305178)
chr5 (83-129)||(33146211-33146257)
chr5 (18-83)||(16515102-16515167)
chr5 (18-83)||(22766962-22767027)
chr5 (18-83)||(25935285-25935350)
chr5 (18-83)||(26281264-26281329)
chr5 (83-128)||(28490031-28490076)
chr5 (18-63)||(28828377-28828422)
chr5 (119-159)||(12991334-12991374)
chr5 (26-78)||(19533907-19533959)
chr5 (18-78)||(22303870-22303930)
chr5 (18-78)||(37145501-37145561)
chr5 (18-57)||(13243514-13243553)
chr5 (119-162)||(13243515-13243558)
chr5 (26-72)||(8255045-8255091)
chr5 (83-137)||(35111256-35111310)
chr5 (93-135)||(37241598-37241640)
chr5 (18-83)||(927312-927377)
chr5 (18-83)||(9894317-9894382)
chr5 (83-128)||(17492634-17492679)
chr5 (225-297)||(28103921-28103994)
chr5 (84-125)||(28489505-28489546)
chr5 (18-83)||(41762210-41762275)
chr5 (93-129)||(2550348-2550384)
chr5 (122-162)||(5658781-5658821)
chr5 (119-159)||(13064957-13064997)
chr5 (18-62)||(15804399-15804443)
chr5 (225-296)||(28101163-28101235)
chr5 (25-65)||(32250111-32250151)
chr5 (25-65)||(35379360-35379400)
[»] scaffold0044 (2 HSPs)
scaffold0044 (41-162)||(56307-56428)
scaffold0044 (18-137)||(56304-56423)
[»] scaffold1562 (2 HSPs)
scaffold1562 (18-162)||(410-554)
scaffold1562 (18-162)||(415-559)
[»] scaffold1158 (2 HSPs)
scaffold1158 (18-162)||(2039-2183)
scaffold1158 (18-162)||(2034-2178)
[»] scaffold0169 (2 HSPs)
scaffold0169 (83-162)||(4080-4159)
scaffold0169 (26-83)||(4093-4150)
[»] scaffold0048 (2 HSPs)
scaffold0048 (85-167)||(82943-83025)
scaffold0048 (18-83)||(82953-83018)
[»] scaffold0009 (3 HSPs)
scaffold0009 (88-162)||(42002-42076)
scaffold0009 (110-162)||(42080-42132)
scaffold0009 (26-83)||(42015-42072)
[»] scaffold0400 (2 HSPs)
scaffold0400 (83-162)||(4487-4566)
scaffold0400 (18-83)||(4496-4561)
[»] scaffold0365 (2 HSPs)
scaffold0365 (83-162)||(5131-5210)
scaffold0365 (18-83)||(5140-5205)
[»] scaffold0129 (3 HSPs)
scaffold0129 (84-162)||(19203-19280)
scaffold0129 (93-162)||(19784-19852)
scaffold0129 (18-83)||(19208-19272)
[»] scaffold0027 (2 HSPs)
scaffold0027 (83-148)||(10905-10970)
scaffold0027 (27-83)||(10905-10961)
[»] scaffold0318 (1 HSPs)
scaffold0318 (83-162)||(2872-2950)
[»] scaffold0301 (1 HSPs)
scaffold0301 (83-162)||(7156-7235)
[»] scaffold0337 (1 HSPs)
scaffold0337 (83-162)||(15855-15931)
[»] scaffold0065 (1 HSPs)
scaffold0065 (83-162)||(2897-2973)
[»] scaffold0240 (1 HSPs)
scaffold0240 (70-129)||(17561-17620)
[»] scaffold0449 (1 HSPs)
scaffold0449 (165-195)||(4312-4342)
[»] scaffold0002 (1 HSPs)
scaffold0002 (83-133)||(130388-130438)


Alignment Details
Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 34756576 - 34756429
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34756576 tggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattc 34756477  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacactct 165  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34756476 cctcaaaacattacattccctcaaaacattcccccatccaaacactct 34756429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 50005220 - 50005084
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  50005220 ggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaa 50005121  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||| ||||||| ||||| ||||||||||||    
T  50005120 cattacattctctcaaaatattccgtcatccaaacac 50005084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 38277557 - 38277420
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||  |||||    
T  38277557 gggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtagttgaattccttcaaa 38277458  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  38277457 acattacattccctcaaaatattctctcatccaaacac 38277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 15034808 - 15034664
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  15034808 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattc 15034709  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||  |||||||||||    
T  15034708 cctcaaaacattacattccctcaaaacattcctccatccaaacac 15034664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 32573071 - 32572960
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32573071 tggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattc 32572972  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  32572971 cctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 40264179 - 40264068
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  40264179 tggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattc 40264080  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  40264079 cctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 44410453 - 44410319
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||| || ||||||||||| |||    
T  44410453 gggaatattttgaggtaatgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaaaatagttgaattcgcttaaa 44410354  T
Q  125 acattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||||||||||||||||||| | ||||||||    
T  44410353 acattacattccctcaaaacattctcccatccaaa 44410319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 4038092 - 4038229
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    |||||| |||||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||||| |||||||| ||||||    
T  4038092 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaa 4038191  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||||| |||||| |||||||||||    
T  4038192 acattactttccctcaaaatattcccccatccaaacac 4038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 28745945 - 28745805
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||| ||||||||| ||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  28745945 tggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattgaattc 28745847  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
     |||||| |||||||||||||||||| |||||| ||||||||    
T  28745846 cctcaaaccattacattccctcaaaatattcccccatccaaa 28745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 27804275 - 27804419
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| || |||||| ||||||||    
T  27804275 tggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattc 27804374  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
      || |||||||||||| ||||||||||||||  |||||||||||    
T  27804375 cttctaaacattacatttcctcaaaacattcctccatccaaacac 27804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 15034677 - 15034813
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||| |||||||| |||||||    
T  15034677 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaa 15034776  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15034777 cattacattccctcaaaacattcccccatccaaacac 15034813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 45565515 - 45565399
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||| ||| || |||||||| ||||||||||||||||| |||||||||    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaaca 45565416  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  45565415 ttcccccatccaaacac 45565399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 37214843 - 37214939
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  37214843 ttttgaggtaatgtaatgttttgagagaattcaattattttgaggtggattcaaacaatagaattcacctc-aagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 4038224 - 4038080
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||||| ||||||||    
T  4038224 tggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattc 4038125  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| || ||||||||    
T  4038124 cctcaaaacattacattccctcaaaacattcccccacccaaacac 4038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 23536077 - 23536188
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||| |||||| ||||||||    
T  23536077 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtagttgaattc 23536176  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  23536177 cctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 28745807 - 28745951
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||  ||||| |||| |    | |||||||||||||| || ||||||||    
T  28745807 tggatgggggaatattttgagggaatgtaatggtttgagggaattcaattattta-aggtgaattctattgtttgaattcacctcaaaatagttgaattc 28745905  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacact 163  Q
     ||||||| |||||||||||| |||| |||| ||||||||||||||    
T  28745906 cctcaaaatattacattcccttaaaatattctctcatccaaacact 28745951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 34756437 - 34756581
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||||| |||||||||||    
T  34756437 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattc 34756536  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||| ||| |||||||| ||| || |||||||||||    
T  34756537 cctcaaaacattatattacctcaaaatatttccccatccaaacac 34756581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 5474437 - 5474528
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 137  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  5474437 aatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 27935624 - 27935523
Alignment:
Q  28 aatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaaca 127  Q
    |||||||||||| ||||||||||||||||| ||||||| || |||||| || |||||||||||||||||||||| |||||| |||||||  |||||||||    
T  27935624 aatattttgagggaatgtaatgttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagtagttgaattttctcaaaaca 27935525  T
Q  128 tt 129  Q
    ||    
T  27935524 tt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 23536188 - 23536072
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||| ||||| |||  |    | ||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  23536188 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 23536089  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  23536088 ttcccccatccaaacac 23536072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 38277425 - 38277568
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||| || ||||||||| |||  |    |  ||| ||||||||| |||||||||||    
T  38277425 tggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaataattgaattc 38277524  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||||||| |||||| |||||||||||    
T  38277525 cctcaaaacattacattacctcaaaatattccc-catccaaacac 38277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 50005089 - 50005233
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||||| |||||||||||||  |||||||||||||||| |||||||| |  ||||||||| |||| |    | |||| ||||||||| |||||||||||    
T  50005089 tggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaataattgaattc 50005188  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||||||| |||||  |||||||||||    
T  50005189 cctcaaaacattacattacctcaaaatattcctccatccaaacac 50005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 8224852 - 8224773
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 8224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 24273209 - 24273288
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 24273288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 25889169 - 25889243
Alignment:
Q  19 ggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaa 94  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25889169 ggatgagggaatattttgaggtaat-taatgttttgaaggaattcaattattttgaggtggattcaaacaatagaa 25889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 28632575 - 28632653
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacac 28632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 27804406 - 27804270
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||||||| |||||||||||| || ||||||||| || ||| || || |||| |    | |||||||||||||| || |||||||| |||||||    
T  27804406 ggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaa 27804307  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||| |||||||||||    
T  27804306 tattacattccctcaaaacattcccccatccaaacac 27804270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 26501068 - 26501147
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 26501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 30190285 - 30190206
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 97  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  30190285 tggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattcaaacaatagaattc 30190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 40264068 - 40264184
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || |||||| || |||| |    | |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| |    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 40264167  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  40264168 ttcccccatccaaacac 40264184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 158  Q
    |||||||| |||||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 6470672 - 6470754
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||| |||| |||||||||| | |||||||| ||||||||||||||||| |||||||||||||  |||||||||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacac 6470754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 30190220 - 30190290
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||| || |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacac 30190290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 31166397 - 31166315
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||| |||||| || ||| ||||  |||||||||||||||  ||||||||||||||||||||||||||    
T  31166397 attcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacac 31166315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 37036940 - 37037017
Alignment:
Q  85 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| ||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacac 37037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 32572960 - 32573072
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  |||||||||| |||||||||||||||| |||||||| |    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaata 32573059  T
Q  146 ttccctcatccaa 158  Q
    ||||| |||||||    
T  32573060 ttcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 44570762 - 44570687
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 158  Q
    |||||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||| | |||||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 45565404 - 45565515
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||  ||||||||||||||||||||||||| |||||| ||||| |||| |    |  |||||||||||||||| ||||||||    
T  45565404 tggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagttgaattc 45565503  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  45565504 cctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 47165201 - 47165280
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||||| |||||| |||||||| |||||||||||||||| |||||||||||| |  |||||||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacac 47165280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 43622964 - 43623046
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| |||  |||||||||||||||| || ||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  43622964 attcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacac 43623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 17502222 - 17502301
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||| |||||||| || ||||||||| ||||||| ||||||||||| || |||||| |||||||| |||||||||||    
T  17502222 ttttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 49659300 - 49659222
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| || ||||| |||  |||||||||||||||||| |||||||| |||||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattccc-catccaaacac 49659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 37447891 - 37447968
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaac 160  Q
    |||||||| ||||||||||||| ||| ||||||||  |||||||||||||||||||| ||| ||||||  ||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 37037012 - 37036956
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  37037012 tggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttga 37036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 44410321 - 44410465
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| | |||| |||||||| ||||||||||||| || |||||||| |||||||||||| |||| |      |||| |||   ||| |||||||||||    
T  44410321 tggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaattctattgtctgaatccactcaaaaataattgaattc 44410420  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||| ||||||| |||||||| ||||||  ||||||||||    
T  44410421 cctcaaaactttacattacctcaaaatattccccaatccaaacac 44410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 946997 - 946930
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 150  Q
    |||||||| |||||||||||| |||| |||||||  ||||||| | ||||||||||||||||||||||    
T  946997 caaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacattccc 946930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 32287934 - 32288001
Alignment:
Q  95 ttcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||| ||||  |||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacac 32288001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 39887211 - 39887132
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||| |||||||| |||||||   ||||||||| | ||||||| |||||||||||||||| ||||||    
T  39887211 caaacaatggaattcacatcaaagtatttgaatttcttcaaaacatcatattcccttaaaacattccctcatctaaacac 39887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 27935569 - 27935639
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||||||||||| ||| |  |||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacac 27935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 29446828 - 29446767
Alignment:
Q  88 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 150  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||||| |||||||||||||    
T  29446828 aatagaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattccc 29446767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 37214939 - 37214842
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaac 144  Q
    |||||||||||||||||||| || || |||||| |||| |    | |||| ||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  37214939 aatgttttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8224778 - 8224843
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| || || ||||| ||| ||||    
T  8224778 tggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattc 8224843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 15245529 - 15245480
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  15245529 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 24273283 - 24273218
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  24273283 tggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 24273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 946458 - 946381
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||| | ||||||| || ||||| ||||||||| |||||||||||||| ||||  |||||||||||||    
T  946458 caaacaatagaattcatc-caaagtatttaaattccctcaaaacaatacattccctcaaagcatt-tctcatccaaacac 946381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 10166586 - 10166504
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||  ||||||||| ||  || |||| |||  ||||||||||||||| || |||||||||| |||||||||||||    
T  10166586 attcaaacaatgaaattcacctaaatatatttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacac 10166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 31195540 - 31195474
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||||||| |||||||||||||| || || ||||  |||| |||||||||||||||||||| |||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcc 31195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 6470741 - 6470684
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||  ||||||||||||||||||||||||| |  ||||||||||||||    
T  6470741 ggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattc 6470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 15467952 - 15468009
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| ||||||||||||    
T  15467952 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 26501134 - 26501077
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  26501134 ggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 26501077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 28632648 - 28632584
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| ||| |||| |||||||||||||||| |||||||| || ||||||||| ||||    
T  28632648 tggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaattc 28632584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 31166320 - 31166377
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 75  Q
    ||||||||||||| |||||||  ||||||||||||||| ||||| ||| |||||||||    
T  31166320 tggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgag 31166377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 31195474 - 31195531
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||||||||| ||||||||||| ||||| |||| || |||||||||||| ||||    
T  31195474 ggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattc 31195531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 37448464 - 37448399
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||  |||||||||||||||||||||| || || ||||| ||| ||||    
T  37448464 tggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattc 37448399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 47541974 - 47542031
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 137  Q
    |||||||||||  |||||||||||||||| || ||||| |||| ||||||||||||||    
T  47541974 attcaaacaatgaaattcacctcaaagtatttaaattctctcataacattacattccc 47542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 25889232 - 25889169
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatcc 156  Q
    |||| ||||||||| |||||||||||  ||||||||||| ||| |||||||| ||||||||||||    
T  25889232 gaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcc 25889169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 17502301 - 17502222
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    |||||||||||||||||||| || ||| || || |||| |  | | ||||||||||||||||| |||||||| |||||||    
T  17502301 aatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 34003461 - 34003382
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| ||| ||||||||||||||||| |||||| | ||||||| |||| ||| | | |||| |||| |||||||||||||    
T  34003461 caaataatggaattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacac 34003382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 47165261 - 47165210
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  47165261 ttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattc 47165210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 51847935 - 51847857
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| || |||||||||| |||||| |||||||   | ||||||||||||| ||||||||||||||  |||||||||||    
T  51847935 caaacgatggaattcacct-aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaacac 51847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 29446767 - 29446813
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattt 71  Q
    |||||| |||||| | ||||||||||||||||||||||||| |||||    
T  29446767 gggaatgttttgaaggaatgtaatgttttgagggaattcaactattt 29446813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 32647385 - 32647319
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||||||| | ||||||| ||||||| |||||||  ||||||||| |||||| | ||||||||||||    
T  32647385 caaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcc 32647319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 37447348 - 37447394
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  37447348 caaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 37447958 - 37447900
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||||| |||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  37447958 gggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 37447900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 44571285 - 44571239
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  44571285 caaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 47074177 - 47074223
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 96  Q
    |||||| ||||||||| || ||||||||| |||||||||||||||||    
T  47074177 ttttgaaggaattcaactactttgaggtgaattcaaacaatagaatt 47074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 44570688 - 44570753
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| | |||| |||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  44570688 tggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 44570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 15660200 - 15660337
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  15660200 gggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagtagttgaattccctcaaa 15660299  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15660300 acattacattccctcaaaacattccctcatccaaacac 15660337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 10127984 - 10128125
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  10127984 tggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattc 10128083  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
     ||||||||||||||||| |||||||||||||| ||||||||    
T  10128084 cctcaaaacattacattctctcaaaacattcccccatccaaa 10128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 42844692 - 42844555
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  42844692 tggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtagttgaattc 42844593  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatc 155  Q
      |||||| |||||||||||||||||||||||| ||||    
T  42844592 cttcaaaatattacattccctcaaaacattcccccatc 42844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 26250919 - 26251030
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  26250919 tggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtagttgaattc 26251018  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  26251019 cctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 28846020 - 28845875
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || ||| |||||||| ||| ||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||||| ||||||||    
T  28846020 tggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattc 28845921  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacact 163  Q
     ||| |||||||||||||||||||||||||||  ||||||||||||    
T  28845920 cctcgaaacattacattccctcaaaacattcctccatccaaacact 28845875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 7352961 - 7352817
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||  || |||||||||||||||||||||| ||| || ||||||||    
T  7352961 tggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatagttgaattc 7352862  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
      ||||||||||||||||||||||||||||||| |||||||||||    
T  7352861 catcaaaacattacattccctcaaaacattcccccatccaaacac 7352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 857388 - 857266
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||||| ||||||||    
T  857388 tggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattc 857289  T
Q  118 gctcaaaacattacattccctca 140  Q
     ||||||||||||||||||||||    
T  857288 cctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 41498631 - 41498494
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctc-aaa 124  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||||  |||||||| ||| |||    
T  41498631 ggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagtggttgaattccctcaaaa 41498532  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||  ||| ||||||||| |||| |||||||||||    
T  41498531 acattattttctctcaaaacaatcccccatccaaacac 41498494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 1107076 - 1107203
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||| ||| ||||||||||||||| ||||||||| || |||||| || |||||||||||||||||||||| | |||| |||||||| ||||||||||||     
T  1107076 ttttaagggaatgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattat 1107175  T
Q  132 attccctcaaaacattccctcatccaaa 159  Q
    |||||||||||| |||||| ||||||||    
T  1107176 attccctcaaaatattcccccatccaaa 1107203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 7352822 - 7352966
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||||| |||||| ||||| |||| |    | |||||||  |||||||| ||||||||    
T  7352822 tggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtagttgaattc 7352921  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||||||| || |||||||||||    
T  7352922 cctcaaaacattacattccctcaaaacatttccccatccaaacac 7352966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 36456004 - 36455912
Alignment:
Q  70 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  36456004 tttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacac 36455912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 11040984 - 11041088
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||||| || ||||||||||||||||||  |||||| |||||||| ||||||    
T  11040984 gggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaatccaaacaatagaattcaccataaagtagttgaattccctcaaa 11041083  T
Q  125 acatt 129  Q
    |||||    
T  11041084 acatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 14982396 - 14982285
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||||||||||||||| || ||||||||| ||||||| |||| ||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||    
T  14982396 ttttgagggaattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcc 14982298  T
Q  150 ctcatccaaacac 162  Q
      |||||||||||    
T  14982297 tccatccaaacac 14982285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 15660332 - 15660188
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||| |    | |||| || |||||| |||||||||||    
T  15660332 tggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaataattgaattc 15660233  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||||||| ||||||  ||||||||||    
T  15660232 cctcaaaacattacattacctcaaaatattcccctatccaaacac 15660188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 857266 - 857393
Alignment:
Q  35 tgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 134  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| ||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacatt 857365  T
Q  135 ccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||| || |||||||||||    
T  857366 ccctcaaaacatttccccatccaaacac 857393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4896658 - 4896786
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||                ||||||||||||||||| ||||||||    
T  4896658 tggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgag----------------gaattcacctcaaagtagttgaattc 4896741  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||| ||| || |||||||||||    
T  4896742 cctcaaaacattacattccctcaaaatatttccccatccaaacac 4896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 26251030 - 26250914
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||||||||| |||| |  | | |||| ||||||||| ||||||||||  |||||||||||||||| |||||||| |    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaata 26250931  T
Q  146 ttccctcatccaaacac 162  Q
    |||||||||||||||||    
T  26250930 ttccctcatccaaacac 26250914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 28845889 - 28846025
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||||||| |||||||||||| |||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| |||||||    
T  28845889 ggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaa 28845988  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| |||||||||||||||| || |||||||||||    
T  28845989 cattatattccctcaaaacatttccccatccaaacac 28846025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 49111461 - 49111373
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaag 106  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||    
T  49111461 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattcaaacaatagaattccccttaaag 49111373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 31473933 - 31473854
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31473854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 10128123 - 10127979
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||  ||||||||||||||||||||||||| || |||||| || |||| |    | |||| ||||||||| |||||||||||    
T  10128123 tggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattc 10128024  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
      ||||||||||||||| | |||||| |||||| |||||||||||    
T  10128023 cttcaaaacattacattacttcaaaatattcccccatccaaacac 10127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 10633116 - 10633037
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 10633037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 49111396 - 49111466
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49111466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 1107201 - 1107056
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||| || | | ||||| |||| |    | ||||||| ||||||||| ||||||||    
T  1107201 tggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagtagttgaattc 1107102  T
Q  118 gctcaaaacattacattccc-tcaaaacattccctcatccaaacac 162  Q
      |||||||||||||||||| | |||| ||| ||||||||||||||    
T  1107101 cttcaaaacattacattcccttaaaaaaatttcctcatccaaacac 1107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 1539725 - 1539649
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 4441449 - 4441342
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||| ||||||| || ||||||||| |||||||||||||||||||| |         ||||||| |||||||||||||||||||||||||||    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcacgt---------tgaattccctcaaaacattacattccctcaaaaca 4441359  T
Q  146 ttccctcatccaaacac 162  Q
    ||||  |||||||||||    
T  4441358 ttccaccatccaaacac 4441342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 2125941 - 2125862
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||| |||||| |||||||||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacac 2125862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 42844555 - 42844697
Alignment:
Q  20 gatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgc 119  Q
    |||| |||||| |||||||| |||||||| |||||| ||||||||| || ||||||||| |||| |    | |||| ||| ||||| ||||||| ||| |    
T  42844555 gatgggggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaaataattgatttccc 42844654  T
Q  120 tcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||| |||||||| ||| || |||||||||||    
T  42844655 tcaaaacattacattacctcaaaatatttccccatccaaacac 42844697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 1112679 - 1112610
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||| |||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacac 1112610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 11041040 - 11040973
Alignment:
Q  94 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattccc-catccaaacac 11040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 4896781 - 4896653
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||                |||||| |||||||||||    
T  4896781 tggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc----------------ctcaaaataattgaattc 4896698  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||||||| |||||| |||||||||||    
T  4896697 cctcaaaacattacattacctcaaaatattcccccatccaaacac 4896653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 46724241 - 46724195
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46724241 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 46724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 36456007 - 36456080
Alignment:
Q  89 atagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||| |||||| |||||||  ||||||| |||||||||||||||||||||||  |||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacac 36456080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 41498575 - 41498644
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||  |||||||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacac 41498644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 35470206 - 35470142
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 147  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  35470206 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatt 35470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 1112704 - 1112775
Alignment:
Q  90 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||  |||||||||| ||| ||||||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaaca 1112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 16516255 - 16516176
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| || ||||| |||||||| || |||||  ||||||||||||||||| ||||||||||||| |||||||||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacac 16516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 5715815 - 5715749
Alignment:
Q  96 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| |||||||| |||||||  ||||||||||||||||  ||||||||||||||||||||||||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacac 5715749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 11348327 - 11348388
Alignment:
Q  98 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaa 11348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 31742794 - 31742845
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggt 77  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  31742794 ggaatattttaaggtagtgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 41139557 - 41139498
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaa 142  Q
    ||||||||||||||||||| |||||| |||||||  |||||||||||||||| |||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaa 41139498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 9451121 - 9451199
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    ||||||||| |||| | || |||||| ||||| || |||||||||||||||| ||| |||||||||| |||||||||||    
T  9451121 caaacaataaaatttagctaaaagtatttgaactctctcaaaacattacattaccttaaaacattccttcatccaaaca 9451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 26534577 - 26534523
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 137  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 2125867 - 2125932
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  2125867 tggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 2125932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 55266852 - 55266929
Alignment:
Q  85 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||| |||||| |||||||| ||||||| |||| ||| |||||||||||||   |||||||||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacac 55266929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 1112615 - 1112675
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| |||||||||||| |||||||||||| || |||||||||    
T  1112615 tggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtg 1112675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 1539659 - 1539711
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    ||||| |||||||| ||||||||||||||||||||||||| || |||||||||    
T  1539659 ggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 1539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 10633042 - 10633102
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  10633042 tggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 10633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 19461725 - 19461801
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||||||||| |  ||||| || ||||||||||||||||||||||||| | |||||| ||| || ||||||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 31473859 - 31473919
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  31473859 tggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 31473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattc 135  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 31742875 - 31742918
Alignment:
Q  119 ctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  31742875 ctcaaaacattacattccctcaaaacattcctccatccaaacac 31742918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 46242533 - 46242612
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| ||  ||||  ||||||||||| ||| ||||||||||||  |||||| ||||||    
T  46242533 caaacaatggaattcacctcaaagtattttgattccttcaaaacattatatttcctcaaaacattgtctcatcaaaacac 46242612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 467887 - 467955
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||  |||||||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  467887 gaattcacttcaaagtggttgaattc-ctcaaaacattacattccatcaaaacattctc-catccaaacac 467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 36455917 - 36456007
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagta 108  Q
    |||||| |||||| |||||||| ||| ||||||||||||||||||||| || ||| ||||| |||| |    | |||||||||||||||||    
T  36455917 tggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagta 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 42542979 - 42543021
Alignment:
Q  120 tcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacac 42543021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 5715754 - 5715810
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    ||||||||||||| |||||||  ||||||||||||||||| ||||||| || |||||    
T  5715754 tggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttga 5715810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 12169104 - 12169037
Alignment:
Q  81 ttcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    ||||||||| ||||||||| | ||| || |||||||  ||||||||||||| |||||||||||||||||    
T  12169104 ttcaaacaacagaattcactttaaaatagttgaattt-ctcaaaacattactttccctcaaaacattcc 12169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 31742845 - 31742781
Alignment:
Q  98 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||| |||||||||||||| | ||| |||| |||||  |||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacac 31742781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 4441355 - 4441394
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  4441355 ggaatgttttgagggaatgtaatgttttgagggaattcaa 4441394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 11348386 - 11348339
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| |||||| |||| ||| |||||||||||||||||||||||||    
T  11348386 tggatgggggaatgttttaagggaatgtaatgttttgagggaattcaa 11348339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 12914060 - 12914119
Alignment:
Q  70 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||| |||||||||||| |||||| || ||| || |||||||| |||||||||||    
T  12914060 tttgaggtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 14982298 - 14982396
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||||||| |||||||||||||||||||||| || || ||| ||||| |||   |   | ||||||||||||||||| |||||||| |||||||    
T  14982298 ggaatgttttgagggaatgtaatgttttgagggaatttaactactttaaggtgaatt-ttatttttgaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 21012542 - 21012499
Alignment:
Q  34 ttgaggcaatgtaatgttttgagggaattcaattattttgaggt 77  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||    
T  21012542 ttgaggaaatgtaatgttatgagggaattcaaatattttgaggt 21012499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 42776721 - 42776642
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  ||||||||| |||||| |||||||  |||||||||||||||  ||| |||||||||   |||||||||||    
T  42776721 caaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacac 42776642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 32724961 - 32725003
Alignment:
Q  54 gagggaattcaattattttgaggtggattcaaacaatagaatt 96  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    
T  32724961 gagggaattcaattactttgaggtgagttcaaacaatagaatt 32725003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 47108353 - 47108323
Alignment:
Q  132 attccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||    
T  47108353 attccctcaaaacattccctcatccaaacac 47108323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 53760779 - 53760825
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||||||||| ||||| || |||||||| |||||||||||    
T  53760779 caaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 1112771 - 1112706
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| ||| || |||||||  |||||||||||| |||||||||||| || ||||||||| ||||    
T  1112771 tggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgaggtgaattc 1112706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 10354418 - 10354361
Alignment:
Q  91 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 148  Q
    |||||||||||| || || || ||||  |||||||||||||||| |||||||||||||    
T  10354418 agaattcacctccaaatatttcaattttctcaaaacattacattacctcaaaacattc 10354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 19461799 - 19461743
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    |||||| || |||||||||| | |||||||||||||||| |||||||| || |||||    
T  19461799 tggatggggaaatattttgaagtaatgtaatgttttgagcgaattcaaataatttga 19461743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 29091164 - 29091212
Alignment:
Q  35 tgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 29091212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 31947675 - 31947596
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattaca---ttccctcaaaacattccctcatccaaaca 161  Q
    |||||||| ||||||||||||  ||| |||||||| |||  |||||||||   |||||||||||||||| | ||||||||||    
T  31947675 caaacaatggaattcacctca--gtatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaaca 31947596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3853765 - 3853621
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  3853765 tggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattt 3853666  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  3853665 cctcaaaacattacattccctcaaaacattcccccatccaaacac 3853621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3858223 - 3858079
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  3858223 tggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattt 3858124  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  3858123 cctcaaaacattacattccctcaaaacattcccccatccaaacac 3858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 13404837 - 13404969
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  13404837 tggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtagttgaattc 13404936  T
Q  118 gctcaaaacattacattccctcaaaacattccc 150  Q
     ||||||||||||||||||||||||||||||||    
T  13404937 cctcaaaacattacattccctcaaaacattccc 13404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 17110879 - 17111023
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||||| ||||||||    
T  17110879 tggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattc 17110978  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||||||| |  |||||||||||    
T  17110979 cctcaaaacattacattccctcaaaacatttctccatccaaacac 17111023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 17111004 - 17110874
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| |||||||||||||    
T  17111004 ttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattac 17110905  T
Q  132 attccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||| || |||||||||||    
T  17110904 attccctcaaaacatttccccatccaaacac 17110874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 33902801 - 33902672
Alignment:
Q  33 tttgaggcaatgtaatgttttgagggaattcaat-tattttgaggtggattcaaa-caatagaattcacctcaaagtaattgaattcgctcaaaacatta 130  Q
    ||||||| |||||  ||||||||||||||||||  || ||||||||| ||||||| ||||||||||||||  |||||| |||||||| ||||||||||||    
T  33902801 tttgagggaatgttttgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacatta 33902704  T
Q  131 cattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||  |||||||||||    
T  33902703 cattccctcaaaacattcctccatccaaacac 33902672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 40046932 - 40046809
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||              ||||||||| |||||||| ||||||    
T  40046932 gggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaa--------------ctcaaagtagttgaattccctcaaa 40046847  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||||||||   |||||||||||    
T  40046846 acattacattccctcaaaacattcatccatccaaacac 40046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 3853626 - 3853770
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||| || ||||||||| |||| |    | |||| ||||||||| |||||||||||    
T  3853626 tggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattc 3853725  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||| |||||||||||| |||||||| ||| || |||||||||||    
T  3853726 cctccaaacattacattacctcaaaatatttccccatccaaacac 3853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 3858084 - 3858228
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||| || ||||||||| |||| |    | |||| ||||||||| |||||||||||    
T  3858084 tggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattc 3858183  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||| |||||||||||| |||||||| ||| || |||||||||||    
T  3858184 cctccaaacattacattacctcaaaatatttccccatccaaacac 3858228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 14799999 - 14800114
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    ||||||||||||||||| || ||||| ||||||  ||||||||||| |||||||||  ||||| |||||||| ||||||||||||| ||||||||||| |    
T  14799999 aatgttttgagggaattaaactattt-gaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaata 14800097  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  14800098 ttcccccatccaaacac 14800114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 24045044 - 24044965
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacac 24044965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 42740048 - 42739969
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||| |||||||||||    
T  42740048 ttttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 4156228 - 4156321
Alignment:
Q  69 ttttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| || ||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||| |||| | |||||||||||    
T  4156228 ttttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacac 4156321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 13404969 - 13404832
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    |||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||  |    | |||| ||||||||| ||||||||||| ||||||    
T  13404969 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaa 13404870  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||| |||||||| ||| || |||||||||||    
T  13404869 acattacattacctcaaaatatttccccatccaaacac 13404832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 37268149 - 37268086
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaaca 88  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  37268149 gggaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaaca 37268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 23011818 - 23011739
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| | | |||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacac 23011739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 29257350 - 29257429
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  29257350 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 29257429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 29482806 - 29482885
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||||| |||||||||||    
T  29482806 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacac 29482885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 33377296 - 33377375
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| || ||||||||||||||||||| |||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacac 33377375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 44346677 - 44346756
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  44346677 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 44346756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 44889438 - 44889359
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacac 44889359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 42711364 - 42711434
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacac 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 35979003 - 35979082
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| |||  || |||||||||||||||||||||||  |||||||||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacac 35979082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 38573433 - 38573524
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 137  Q
    |||||||||||| ||||||| || ||| || || ||||||||||||||||||| ||||||||| |||||||  ||||||||| |||||||||    
T  38573433 aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattccc 38573524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 33986087 - 33986009
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||  |||||||||||||||| |||||||| |||||||||||||||| | |||| |||||||| |||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacac 33986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 11744717 - 11744797
Alignment:
Q  82 tcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||| ||| || ||||||||  ||| |||||||||||||||| ||| |||| |||||||||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacac 11744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 8049338 - 8049271
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 150  Q
    ||||||||  |||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccc 8049271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 28324661 - 28324740
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||| ||||| ||| ||||||||  ||||||||||||||||||||||||||||||  |||||||||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacac 28324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 36103185 - 36103106
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  ||||||| |||||||| |||||||  || ||||||||||||||||||||||||||||  |||||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 36103106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 14321 - 14244
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||  |||||||| ||||||| |||||||| || |||||||||||||||||| |||||||||| |||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacattccc-catccaaacac 14244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 40046874 - 40046932
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 150  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  40046874 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 515531 - 515610
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  ||||||| |||||||| ||||| || || ||||||||||||||| ||||||||||||  |||||||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacac 515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 9982719 - 9982642
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| |||||||||||||| || || ||||| |||||||||||||||| ||| ||||||||| | |||||||||||    
T  9982719 aaacaatggaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaacattctc-catccaaacac 9982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 37268091 - 37268161
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||| |||||||| ||||||  ||||||||||    
T  37268091 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacac 37268161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 14991750 - 14991697
Alignment:
Q  109 attgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||||||| ||||||||||||||| |||||||||||    
T  14991750 attgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacac 14991697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 24044970 - 24045035
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  24044970 tggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 24045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 30435270 - 30435365
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| |||||||||||| ||||||||| || || |||||| || ||| ||||||||||||| |||| ||| || |||||||| |||||||||||    
T  30435270 ttttgagggaatgtaatgtttggagggaatttaacta-tttgagttgaatttaaacaatagaatttaccttaaa-tagttgaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 42711422 - 42711324
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    |||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||||      || ||||| ||||||||| |||||||  ||||||    
T  42711422 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattca------agtattcaactcaaagtagttgaatttcctcaaa 42711329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 15186816 - 15186880
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 147  Q
    ||||||||||||||||||| ||| || |||||||  ||||||||||||||||  |||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacattatctcaaaacatt 15186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 31807465 - 31807414
Alignment:
Q  110 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  31807465 ttgaattccctcaaaacattacattcc-tcaaaacattctctcatccaaacac 31807414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 4156316 - 4156269
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||    
T  4156316 tggatgggagaatattttgagggaatgtaatgttttgagggaattcaa 4156269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 134  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 14800109 - 14800062
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| ||||||||||||||| || ||||||||||||||||||||||    
T  14800109 tggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 14800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 33902685 - 33902820
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc-aaacaatagaattcacctcaaagta-attgaattcgctcaa 123  Q
    ||||| |||||||| ||||||||||||||||||||||||| || |||  |||| |||| |     | |||||||||||||||||  |||||||| |||||    
T  33902685 ggaatgttttgagggaatgtaatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaagtagtttgaattccctcaa 33902782  T
Q  124 aacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||  |||||||||| |||||||||| ||||| |||||    
T  33902783 aacaaaacattccctc-aaacattcccccatcccaacac 33902820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 8689196 - 8689138
Alignment:
Q  103 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| |  ||||||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 31807419 - 31807471
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 71  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||| |||||    
T  31807419 tggatgagagaatgttttgagg-aatgtaatgttttgagggaattcaactattt 31807471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 8049271 - 8049323
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggt 77  Q
    |||||| |||||||| ||| ||||||||||||||||||||| || ||||||||    
T  8049271 gggaatgttttgagggaatataatgttttgagggaattcaaatactttgaggt 8049323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 14991702 - 14991750
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaat 66  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||||    
T  14991702 tggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaat 14991750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 23011753 - 23011809
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  23011753 gaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 23011809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 27322687 - 27322727
Alignment:
Q  122 aaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacac 27322727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 40046823 - 40046871
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 75  Q
    |||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  40046823 gaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 40046871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 1088276 - 1088355
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||| ||| |||| || |||||||  ||||||||| ||||||| |||||||||||||  || ||||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacac 1088355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 32626069 - 32626108
Alignment:
Q  119 ctcaaaacattacattccctcaaaacattccctcatccaa 158  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaa 32626108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 35404741 - 35404808
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 150  Q
    |||||| || |||||||||||||||| |||||||  ||||||| |||||||| ||||  |||||||||    
T  35404741 caaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacattacctcgtaacattccc 35404808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 26520469 - 26520499
Alignment:
Q  132 attccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||    
T  26520469 attccctcaaaacattccctcatccaaacac 26520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 29611454 - 29611408
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 8689207 - 8689248
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacatt 134  Q
    |||||| || ||||||||||||||| ||||||||||||||||    
T  8689207 aattcaacttaaagtaattgaattccctcaaaacattacatt 8689248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 11744792 - 11744727
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||| |||||||| |||| ||||||||||| ||| ||||||||| || ||| ||||| ||||    
T  11744792 tggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaactagtttaaggtgaattc 11744727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 21465572 - 21465629
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    |||||||| ||||| ||||||||||| |||||||| |||  || ||||||||||||||    
T  21465572 caaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattccctca 21465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 29257424 - 29257359
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  29257424 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 29257359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 29482880 - 29482815
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| || ||| |||||||||||||||||| || |||| |||| ||||    
T  29482880 tggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattc 29482815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 30435300 - 30435251
Alignment:
Q  113 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| ||| ||||||||||||||||||||||||| |  |||||||||||    
T  30435300 aattccctccaaacattacattccctcaaaacatttctccatccaaacac 30435251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33377370 - 33377305
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||| || |||||||||||||||||| || |||| |||| ||||    
T  33377370 tggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattc 33377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 44346751 - 44346686
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  44346751 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 44346686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 44889372 - 44889429
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||| ||| ||||||||||||||||||||| || ||||| ||| ||||    
T  44889372 ggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattc 44889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||| |||||||| |||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 9982655 - 9982711
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||| |||| ||| |||||||||||||||| ||||| || |||||||||||| ||||    
T  9982655 gaatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattc 9982711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 33986014 - 33986074
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| | |||| | |||||||||||||||| |||||||| || |||||||||    
T  33986014 tggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtg 33986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 31070546 - 31070415
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaac 126  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaac 31070447  T
Q  127 attacattccctcaaaacattccctcatccaaa 159  Q
    |||||||||||||||||||||||| ||||||||    
T  31070446 attacattccctcaaaacattccc-catccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 44692963 - 44692827
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||  |||||||| |||||||    
T  44692963 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaa 44692864  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| |||||||||||||||||| |||||||||||    
T  44692863 cattactttccctcaaaacattcccccatccaaacac 44692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 46429545 - 46429434
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  46429545 tggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagtagttgaattc 46429446  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  46429445 cctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 9129493 - 9129349
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||| ||||||||    
T  9129493 tggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattc 9129394  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
      |||||||||||||||||||||||| | || | |||||||||||    
T  9129393 catcaaaacattacattccctcaaaatagtctcccatccaaacac 9129349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 9137600 - 9137456
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||| ||||||||    
T  9137600 tggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattc 9137501  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
      |||||||||||||||||||||||| | || | |||||||||||    
T  9137500 catcaaaacattacattccctcaaaatagtctcccatccaaacac 9137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 44436384 - 44436263
Alignment:
Q  41 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||    
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctca 44436285  T
Q  141 aaacattccctcatccaaacac 162  Q
    |||||||||| |||||||||||    
T  44436284 aaacattcccccatccaaacac 44436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 47284375 - 47284268
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  47284375 tggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagtagctgaattc 47284276  T
Q  118 gctcaaaa 125  Q
     |||||||    
T  47284275 cctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 5415800 - 5415937
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||  | ||||||||||||||||||| |||||| ||||||||  |||||    
T  5415800 gggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtagttgaattccatcaaa 5415899  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||||| |||||| |||||||||||    
T  5415900 acattactttccctcaaaatattcccccatccaaacac 5415937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 39215987 - 39215888
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39215987 tggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgaggtggattcaaacaataaaattcacctcaaagtaattgaattc 39215888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 9129366 - 9129498
Alignment:
Q  30 tattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||| ||||||||||||||| ||||||||| || ||| || || |||| |    | ||||||||||||||||| |||||||| |||||||||||    
T  9129366 tattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 9129465  T
Q  130 acattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||||    
T  9129466 acattccctcaaaacattccctcatccaaacac 9129498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 9137473 - 9137605
Alignment:
Q  30 tattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||| ||||||||||||||| ||||||||| || ||| || || |||| |    | ||||||||||||||||| |||||||| |||||||||||    
T  9137473 tattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 9137572  T
Q  130 acattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||||    
T  9137573 acattccctcaaaacattccctcatccaaacac 9137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 42130709 - 42130821
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    |||||||||||||||  |||||||||||||||||||||||||||| || | ||||||||||| | |||||||||||||||||||||||||||| || |||    
T  42130709 gggaatattttgaggtgatgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagtaattgaattccctaaaa 42130808  T
Q  125 acattacattccc 137  Q
    | |||||||||||    
T  42130809 agattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 28092224 - 28092335
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  | ||||||||    
T  28092224 tggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttgaattc 28092323  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  28092324 cctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 44692832 - 44692976
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| || ||||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||||| ||||||||    
T  44692832 tggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattc 44692931  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||  |||||||||||    
T  44692932 cctcaaaacattacattccctcaaaacattcctccatccaaacac 44692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 27252043 - 27251932
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||| || |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||| ||||||||    
T  27252043 tggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattc 27251944  T
Q  118 gctcaaaacatt 129  Q
     || ||||||||    
T  27251943 ccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 28092335 - 28092220
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| | |||||||||| |||| |    | |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  28092335 aatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaaca 28092236  T
Q  146 ttccctcatccaaaca 161  Q
    ||||| ||||||||||    
T  28092235 ttcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 21307520 - 21307599
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacac 21307599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 31070423 - 31070546
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||||| ||||||||||| ||||||    
T  31070423 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaa 31070522  T
Q  125 acattacattccctcaaaacattc 148  Q
    |||||||||| |||||||| ||||    
T  31070523 acattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 46672799 - 46672870
Alignment:
Q  91 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 46672870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 5415932 - 5415788
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| || |||||||||||| ||||||||| || ||| ||||| |||| |    | | | |||||| |||||| ||||||||    
T  5415932 tggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagtagttgaattc 5415833  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||| ||||||  ||||||||||    
T  5415832 cctcaaaacattacattccctcaaaatattcccctatccaaacac 5415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 44436268 - 44436384
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||| |||||| ||||| |||| |    | ||||||||||||||||| ||||||||    
T  44436268 tggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagtagttgaattc 44436367  T
Q  118 gctcaaaacattacatt 134  Q
     ||||||||||||||||    
T  44436368 cctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 49457423 - 49457348
Alignment:
Q  87 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49457348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 53129831 - 53129910
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacac 53129910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 27251978 - 27252048
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacac 27252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 36397979 - 36398056
Alignment:
Q  85 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  36397979 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacac 36398056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 332012 - 332096
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| |||||| |||||||| |||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 46429434 - 46429550
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | |||| ||||||||| |||||||||||  ||||||||||||||| |||||||| |    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaata 46429533  T
Q  146 ttccctcatccaaacac 162  Q
    |||||||||||||||||    
T  46429534 ttccctcatccaaacac 46429550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 7302430 - 7302351
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||| |||  |||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacac 7302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 47767516 - 47767437
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 47767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||  ||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 31189385 - 31189464
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| ||| |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||| |||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacac 31189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 37054478 - 37054399
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacac 37054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 42005941 - 42006020
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||| ||| || |||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 42006020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 48947689 - 48947610
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||   |||||||||||    
T  48947689 caaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacac 48947610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 53470417 - 53470496
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||| ||||||| |||||||| ||||||||| || |||||||||||||||| ||||||||||||||    
T  53470417 caaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacac 53470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 34088653 - 34088576
Alignment:
Q  85 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||| |  |||||||||||    
T  34088653 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacac 34088576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 671607 - 671683
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||| ||||||||| |||||||  ||||||| ||||||||| ||||||||||||||||||||||  |||||||    
T  671607 caaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaa 671683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 7976632 - 7976560
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatc 155  Q
    |||||||||||||||||||||| ||| || |||||  ||||||||||||||||| ||||||||||| ||||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattctctcatc 7976560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 46672865 - 46672772
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||      | ||||||||||||||||| ||||||||    
T  46672865 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc------ttgaattcacctcaaagtagttgaattc 46672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 47284316 - 47284380
Alignment:
Q  98 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||    
T  47284316 acctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacac 47284380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 25655335 - 25655418
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||||||| || |||||| || ||||||| ||||||||||| || |||||| ||||||||  ||||||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 39110469 - 39110399
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||| |||||||| | ||||||||||||||| ||||||||||| | ||||||||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacac 39110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 35279920 - 35279969
Alignment:
Q  113 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacac 35279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 39110404 - 39110485
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcac 99  Q
    ||||||| | ||| |||||||  |||||||||||||| |||||||||| || |||||| || ||||||||||||||||||||    
T  39110404 tggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 39215880 - 39215992
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||| |||||||||||||| ||||||||| |||  |    | |||| ||||||||| ||||||||||  |||||||||||| ||| |||||||| ||||     
T  39215880 tttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattct 39215979  T
Q  150 ctcatccaaacac 162  Q
    |||||||||||||    
T  39215980 ctcatccaaacac 39215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 52527120 - 52527041
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||| ||||||||||| ||||||||   || |||||||||| || ||||||||||||| |||||||||||    
T  52527120 caaacaatggaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacac 52527041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 21307594 - 21307529
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| ||||| || ||||||||||||||||||||||||| || ||||||||| ||||    
T  21307594 tggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 21307529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 42130818 - 42130697
Alignment:
Q  41 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    |||||||| |||| |||||||||||||| ||||||||| |||| |    | |||| ||| | ||  ||||||||||| |||||||||||||||  |||||    
T  42130818 aatgtaatctttttagggaattcaattactttgaggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctca 42130719  T
Q  141 aaacattccctcatccaaacac 162  Q
    ||| |||||| || ||||||||    
T  42130718 aaatattcccccacccaaacac 42130697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 37321625 - 37321558
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||||| |||||| |||||||  ||||||||||||| || |||||||| |||||| ||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaa 37321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 49457353 - 49457400
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||    
T  49457353 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 49457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 36398051 - 36397986
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  36398051 tggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 36397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37321560 - 37321625
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| ||||||||||||||| || |||||||||||||| ||||||| || ||| ||||| ||||    
T  37321560 tggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 38506861 - 38506910
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 53129905 - 53129840
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| ||| |||| ||||||||||||| ||||||||||| || |||| |||| ||||    
T  53129905 tggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattc 53129840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 31189456 - 31189400
Alignment:
Q  21 atgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggt 77  Q
    ||||| |||| |||||||| |||||||||||||||| |||||||| || ||||||||    
T  31189456 atgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggt 31189400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 40929704 - 40929613
Alignment:
Q  70 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||| |||||||||||||||||||  | ||| || |||||||  |||  ||||||| |||| || ||||||||||| |||||||||||    
T  40929704 tttgaggtgaattcaaacaatagaattcatattaaaatagttgaattttctccgaacattatattctctgaaaacattccc-catccaaacac 40929613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 46635926 - 46635862
Alignment:
Q  98 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| |||||| |||||||  ||||||||||||||||  |||||||||||  |||||||||||||    
T  46635926 acctaaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacac 46635862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 47767442 - 47767502
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  47767442 tggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 47767502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 8762210 - 8762159
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 134  Q
    |||||||| |||||||| |||||||| |||||||| |||| |||||||||||    
T  8762210 caaacaatggaattcacatcaaagtatttgaattccctcataacattacatt 8762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 46706736 - 46706674
Alignment:
Q  83 caaacaatagaattcacctcaaagtaatt--gaattcgctcaaaacattacattccctcaaaa 143  Q
    |||||||| ||||||||||||||||| ||  |||||| ||| |||||||||||||| ||||||    
T  46706736 caaacaatggaattcacctcaaagtatttaagaattctctcgaaacattacattccttcaaaa 46706674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 50168598 - 50168665
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 150  Q
    |||||||| ||||||| || ||| || |||| ||  |||||||||||||||| |||||||||||||||    
T  50168598 caaacaatggaattcagctaaaattatttgagtttcctcaaaacattacattacctcaaaacattccc 50168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 2104818 - 2104772
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||||    
T  2104818 caaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 7302356 - 7302402
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattca 64  Q
    ||||||||||||| |||||||  ||||||||||||||| ||||||||    
T  7302356 tggatgagggaatgttttgagagaatgtaatgttttgaaggaattca 7302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 13176550 - 13176600
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 133  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13176550 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 13176600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 13339451 - 13339501
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 133  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13339451 caaacaatagaatccacctaaaagtctttgaattctctcaaaacattacat 13339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 21730988 - 21730907
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||  |||||| |||||| || ||||||||  ||||||||||||||  ||| |  ||||||||||||||||||||    
T  21730988 attcaaacaatgaaattcatctcaaa-tatttgaattccttcaaaacattacataaccttaggacattccctcatccaaacac 21730907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  103 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    |||||| ||||||||  ||||||||||| ||| ||||||||||||||  ||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 46001382 - 46001420
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattca 64  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  46001382 ggaatattttgaggtaatgtaatgtttcgagggaattca 46001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 19475834 - 19475891
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||| ||||||||||| ||||| ||||||| || ||||||||| ||||    
T  19475834 ggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattc 19475891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 30766571 - 30766628
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 30766628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 30767189 - 30767112
Alignment:
Q  83 caaacaatagaattcacctca-aagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||| ||||||||||   ||||| ||||||||  ||| ||||||| |||||||||||||||| || ||||||||    
T  30767189 caaacaatggaattcaccttttaagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 19475971 - 19475923
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 141  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  19475971 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 19475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35279964 - 35279920
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaatt 62  Q
    |||||| |||||| |||||||| |||||||||||||||| |||||    
T  35279964 tggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 37054404 - 37054464
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||| ||| ||||||||||||||| ||||||||| ||  ||||||||    
T  37054404 tggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtg 37054464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 42006015 - 42005971
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaatt 62  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||    
T  42006015 tggatgggggaatgttttgagggaatgtaatgttttgaaggaatt 42005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 53470491 - 53470431
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    ||||||||| ||| |||||||| ||| || |||||||||||||||||| || |||| ||||    
T  53470491 tggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtg 53470431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 41461525 - 41461669
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  41461525 tggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaatagttgaattc 41461624  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  41461625 cctcaaaacattacattccctcaaaacattcccccatccaaacac 41461669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 27033607 - 27033495
Alignment:
Q  50 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  27033607 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcc 27033508  T
Q  150 ctcatccaaacac 162  Q
    | |||||||||||    
T  27033507 cccatccaaacac 27033495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 14365710 - 14365853
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc-aaacaatagaattcacctcaaagtaattgaatt 116  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||  ||||||| |||||||    
T  14365710 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcac--caaagtagttgaatt 14365807  T
Q  117 cgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    | |||||||||||||||||||||||||||||||  |||||||||||    
T  14365808 ccctcaaaacattacattccctcaaaacattcctccatccaaacac 14365853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 784817 - 784947
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||||||| ||||||||||||||| |||||| || || |||||| || |||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  784817 ttttgagggaatgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattac 784916  T
Q  132 attccctcaaaacattccctcatccaaacac 162  Q
    ||||| |||||| |||||| |||||||||||    
T  784917 attccatcaaaatattcccccatccaaacac 784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 11716427 - 11716550
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaac 126  Q
    |||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||         |||||||| ||||||||    
T  11716427 gaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc---------ttgaattccctcaaaac 11716517  T
Q  127 attacattccctcaaaacattccctcatccaaa 159  Q
    |||||||||||||||||||||||| ||||||||    
T  11716518 attacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 14537209 - 14537320
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  14537209 tggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattc 14537308  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  14537309 cctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 41461664 - 41461520
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||||| |||||    
T  41461664 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattc 41461565  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||||||| ||| || |||||||||||    
T  41461564 cctcaaaacattacattacctcaaaatatttccccatccaaacac 41461520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 11684711 - 11684604
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct---------tgaattccctcaaaacattacattccctcaaaaca 11684621  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  11684620 ttcccccatccaaacac 11684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 14365840 - 14365705
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaata-gaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||||  ||| |||| |    |  ||||||||||||||||| |||||||| ||||||    
T  14365840 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttg--gtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaa 14365743  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14365742 acattacattccctcaaaacattcccccatccaaacac 14365705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 14537320 - 14537204
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaaca 14537221  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  14537220 ttcccccatccaaacac 14537204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 784942 - 784813
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| || |||||    
T  784942 tggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttaaattc 784843  T
Q  118 gctcaaaacattacattccctcaaaacatt 147  Q
      ||||||||||||||||||||||||||||    
T  784842 cttcaaaacattacattccctcaaaacatt 784813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 10244298 - 10244182
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||| ||||||||||| || |||||||||  ||||||||||| |||||||||  ||||| |||||||| ||||||||||||| |||||||| || |    
T  10244298 aatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaata 10244199  T
Q  146 ttccctcatccaaacac 162  Q
    ||| | |||||||||||    
T  10244198 ttctcccatccaaacac 10244182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 17180374 - 17180302
Alignment:
Q  90 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 17180302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 10480203 - 10480124
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||||||||||||||||||||||| |||||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacac 10480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 11532242 - 11532321
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||| |||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacac 11532321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 11793979 - 11793900
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||| |||||| |||||||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacac 11793900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 11716548 - 11716413
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||         |||| |||| |    | ||||||||||||||||| ||||||||    
T  11716548 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa---------ggtgaattctattgtttgaattcacctcaaagtagttgaattc 11716458  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||||||||   |||||||||||    
T  11716457 cctcaaaacattacattccctcaaaacattcttccatccaaacac 11716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 769120 - 769041
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  769120 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 769041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 1583798 - 1583877
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  1583798 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 1583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 11824718 - 11824801
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||||||| || |||||| || |||||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 13017863 - 13017784
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| || |||| ||||||||||||||||||||| || |||||||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacac 13017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 33189246 - 33189325
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  33189246 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 33189325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 44256255 - 44256181
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataga 93  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  44256255 tggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaattcaaacaataga 44256181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 3345867 - 3345783
Alignment:
Q  46 aatgttttgagggaattcaat-tattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||||||||||||  || ||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||||||    
T  3345867 aatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 11141389 - 11141310
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  11141389 caaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 11141310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 45094460 - 45094539
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||| | |||||| || ||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacac 45094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 28740679 - 28740601
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacac 28740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 17180307 - 17180364
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 75  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  17180307 tggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgag 17180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 40026151 - 40026070
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    ||||||||||||||||||||||||||||| || ||||  |||||||||||| ||| |||||||| |||||| ||| ||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 35047668 - 35047747
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| | ||||||||| ||||||| |||||||| || |||||| |||||| ||||||||||||||| |||||||||||    
T  35047668 caaacattggaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacac 35047747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 17905729 - 17905659
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||| || ||||||||  | |||||||||||||| |||||||||||||||||||| |||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacac 17905659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 11532316 - 11532251
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  11532316 tggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 11532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 11793905 - 11793970
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  11793905 tggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 11793970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 14954284 - 14954393
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||| |||||||  |||||||| |||| || |||||||| || ||| | ||  ||||||| ||||||||||||||| |||||| |||||||| ||||||    
T  14954284 ggaatgttttgagtgaatgtaatcttttaagagaattcaactactttaaagtaaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaa 14954383  T
Q  125 acattacatt 134  Q
    ||||||||||    
T  14954384 acattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 3092366 - 3092290
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    |||||||| ||||| ||| ||||||| |||||||  ||||||||| |||||||||||||||||||||  ||||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaa 3092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 39630308 - 39630245
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 147  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatt 39630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 27033500 - 27033607
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||  ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  ||||||||||    
T  27033500 tggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattc 27033599  T
Q  118 gctcaaaa 125  Q
     |||||||    
T  27033600 cctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 30751338 - 30751428
Alignment:
Q  85 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactctgagggattttt 176  Q
    |||||||||||||| || ||| || || ||||| ||||||||||||||||  |||||||||||| ||||||||||||| || | ||||||||    
T  30751338 aacaatagaattcatcttaaa-tatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactcatggattttt 30751428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 141  Q
    ||||||||  |||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 11606797 - 11606719
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    ||||||||  |||||||||||||||| ||| ||||  | |||| |||||||||| ||||||||||||||||||| ||||    
T  11606797 caaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattccttcaaaacattccctcatcctaaca 11606719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 44256191 - 44256260
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||| |||| |||||| |||||||||||||||| |||| ||| |||||| |||||||||||    
T  44256191 gaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacac 44256260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 17905665 - 17905729
Alignment:
Q  19 ggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||||||| |||||||  ||||||||||||| | ||||||||| |||||||||||| ||||    
T  17905665 ggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattc 17905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 7228001 - 7228080
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||| ||||||| ||| || |||||  |||||||||||||||| ||||||||||| || |||||||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacac 7228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 11684609 - 11684656
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||    
T  11684609 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 29279008 - 29279086
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    |||||||||||||| | |  || ||| |||||||  ||| |||||||||||| |||||||||||||| |||||||||||    
T  29279008 caaacaatagaatttagcaaaatgtatttgaattatctcgaaacattacattacctcaaaacattccttcatccaaaca 29279086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10480129 - 10480194
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||||||||  |||||||||||| || ||||||||| ||||    
T  10480129 tggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattc 10480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 14954395 - 14954271
Alignment:
Q  39 gcaatgtaatgttttgagggaattcaattattttgaggtggattc-aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 137  Q
    ||||||||||||||||||||||||||| || ||| ||||| |||| |     | ||||| || | |||||| |||||||| || |||| ||||||||| |    
T  14954395 gcaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcac 14954296  T
Q  138 tcaaaacattccctcatccaaacac 162  Q
    ||||||||||||   ||||||||||    
T  14954295 tcaaaacattcctctatccaaacac 14954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 30698291 - 30698351
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  30698291 tggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 30698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaaca 127  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 740791 - 740724
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 147  Q
    |||||||||||| |||||||||||||  |  ||||||| | ||||||||||||||  |||||||||||    
T  740791 attcaaacaataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaacatt 740724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    ||||||| |||||||||||||| || |||||||| |||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 11595355 - 11595394
Alignment:
Q  44 gtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  11595355 gtaatgttttgagggaattcaaatattttgaggtgaattc 11595394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 8736461 - 8736491
Alignment:
Q  132 attccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||    
T  8736461 attccctcaaaacattccctcatccaaacac 8736491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 20935790 - 20935744
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  20935790 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 28740620 - 28740662
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    |||||||| ||||||||||||||||||||||||| || |||||    
T  28740620 ttttgagggaatgtaatgttttgagggaattcaaatactttga 28740662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 40026081 - 40026139
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||||| ||| ||||||||||||| |||| || || ||||||||| ||||    
T  40026081 gggaatattttgaggtaatataatgttttgaggaaatttaaatactttgaggtgaattc 40026139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 769046 - 769111
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  769046 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 769111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 1583872 - 1583807
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  1583872 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 1583807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 8735914 - 8735849
Alignment:
Q  97 cacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||| |||||||| |||  ||||||| |||||||||||||||   | |||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacac 8735849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 13017789 - 13017854
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| || ||| |||||||| |||||||| |||| ||||||||||| || ||||||||| ||||    
T  13017789 tggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattc 13017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 21504537 - 21504488
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||    
T  21504537 attcaaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33189320 - 33189255
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  33189320 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 33189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 35047742 - 35047677
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  35047742 tggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattc 35047677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 39477976 - 39478017
Alignment:
Q  121 caaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||| ||||||||||||| | |||||||||||    
T  39477976 caaaacattacattacctcaaaacattctcacatccaaacac 39478017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 45094531 - 45094490
Alignment:
Q  21 atgagggaatattttgaggcaatgtaatgttttgagggaatt 62  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  45094531 atgagggaatgttttgagggaatataatgttttgagggaatt 45094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 7167714 - 7167670
Alignment:
Q  34 ttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| ||||||||||||||| ||||||||| || |||||||||    
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtg 7167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11141315 - 11141375
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| ||||    
T  11141315 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtg 11141375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 11532169 - 11532217
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 141  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 11532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 32839694 - 32839646
Alignment:
Q  35 tgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaattc 32839646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 8e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 9763153 - 9763017
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  9763153 ggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaa 9763054  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||| || | |||||||||    
T  9763053 cattacattccctcaaaacatttccccttccaaacac 9763017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 9285768 - 9285652
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || |||||| || ||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9285669  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  9285668 ttcccccatccaaacac 9285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 6919733 - 6919861
Alignment:
Q  33 tttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattaca 132  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||| |  |||||||| |||||||||||||     
T  6919733 tttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattact 6919831  T
Q  133 ttccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||| |||||||||||    
T  6919832 ttccctcaaaacattcccccatccaaacac 6919861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 776104 - 776219
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||||||| ||||||||||||||||| ||||||| || ||| || |  |||||||||||||||||||||| |||||| |||||||  |||||||||||||    
T  776104 ttttgagggaatgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacattac 776203  T
Q  132 attccctcaaaacatt 147  Q
    ||||||||||||||||    
T  776204 attccctcaaaacatt 776219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 6919856 - 6919713
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| || ||||||||||||||||||||||  ||||  ||||| |||| |    | ||||||||||||||||| ||||||||    
T  6919856 tggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccattta-aggtgaattctattgtttgaattcacctcaaagtagttgaattc 6919758  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||| ||||||  |||||||||||    
T  6919757 cctcaaaacattacattccctcaaaccattcctccatccaaacac 6919713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 9763036 - 9763166
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||| | ||||||||||| |||||||||||||    
T  9763036 ttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataattgaattccctcaaaacattac 9763135  T
Q  132 attccctcaaaacattccctcatccaaacac 162  Q
    ||| |||||||| |||||  |||||||||||    
T  9763136 attacctcaaaatattcctccatccaaacac 9763166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 34244969 - 34245048
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 34245048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 15299510 - 15299578
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattccc-catccaaacac 15299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 9285657 - 9285768
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||| |    | ||||||| ||||||||| ||||||||    
T  9285657 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagtagttgaattc 9285756  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  9285757 cctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 13487359 - 13487280
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||| |||| ||||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacac 13487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 28918249 - 28918170
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||||||| |||||||  || ||||||||||||||||||||||||||||  |||||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 28918170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 29889423 - 29889502
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| ||| |||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||  |||||||||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacac 29889502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 776215 - 776100
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||||||| ||||||||||||||||| ||||||| || ||| ||||| |||| |    | ||||| | || |||||| |||||||  |||||||||||||    
T  776215 ttttgagggaatgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaaagtagttgaatttcctcaaaacattac 776116  T
Q  132 attccctcaaaacatt 147  Q
    ||||||||||||||||    
T  776115 attccctcaaaacatt 776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 1368561 - 1368482
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||  | |||||||| || |||| ||||||||| |||||||||||||  |||||||||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacac 1368482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 15832550 - 15832471
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||| ||||||| |||||||| || ||||||||||||||| || ||||||| ||||||||||||||    
T  15832550 caaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacac 15832471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 6358237 - 6358319
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| |||||||||||||||| ||||||| || ||||| |||||||||||||||| ||||||||||  | |||||| ||||||    
T  6358237 attctaacaatagaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaacacgctctcatctaaacac 6358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 15299471 - 15299417
Alignment:
Q  95 ttcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 149  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcc 15299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 8574759 - 8574700
Alignment:
Q  103 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 8574760 - 8574819
Alignment:
Q  103 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 34364827 - 34364770
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    |||||||| ||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 9697546 - 9697489
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    |||||||| |||||||| |||||||| ||||||||  ||||||||| |||||||||||    
T  9697546 caaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattccctca 9697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 15299567 - 15299514
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||||| ||||||||||||||| ||||||||| || |||||||||    
T  15299567 gggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtg 15299514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 34245035 - 34244987
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  34245035 ggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 34244987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 33733472 - 33733437
Alignment:
Q  127 attacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||| |||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacac 33733437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 13487287 - 13487345
Alignment:
Q  20 gatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||| |||||| |||||||| |||||| |||| ||||||||||||| || |||||||||    
T  13487287 gatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtg 13487345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||| ||||||||||||||||| ||||| || |||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 29889489 - 29889432
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||| | ||||||||||||||||||||||||| || ||||| ||| ||||    
T  29889489 ggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 29889432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 15299417 - 15299469
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    ||||| |||||||  |||||||||||||||| |||||||| || |||||||||    
T  15299417 ggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtg 15299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 28918183 - 28918235
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    ||||| |||||||| ||||||||||||| ||| ||||||| || |||||||||    
T  28918183 ggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtg 28918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 5644826 - 5644682
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  5644826 tggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagtagttgaattc 5644727  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||  ||| |||||||    
T  5644726 cctcaaaacattacattccctcaaaacattcctccattcaaacac 5644682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 29065960 - 29065824
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  29065960 ggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaa 29065861  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||   |||||||||||    
T  29065860 cattacattccctcaaaacattcatccatccaaacac 29065824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 21635895 - 21636038
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  21635895 tggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttaaattc 21635994  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
      |||||||||||||||||||||||||||| || ||||||||||    
T  21635995 cttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 40110887 - 40110742
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagtaattgaatt 116  Q
    |||||| || ||| ||| |||| ||||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| |||||| |||||||    
T  40110887 tggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaatt 40110788  T
Q  117 cgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    | |||||||||||||||||||||||||||||||| |||||||||||    
T  40110787 ccctcaaaacattacattccctcaaaacattcccccatccaaacac 40110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 2057405 - 2057549
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||  ||||||||||||||||||||||||| || |||||||||  ||||||||||| |||||||||  ||||| ||||||||    
T  2057405 tggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattc 2057504  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||| ||||||||||| |||||| |||||||||||    
T  2057505 cctcaaaacattactttccctcaaaatattcccccatccaaacac 2057549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 46069537 - 46069421
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||||||| |||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  46069537 tggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtagttgaattc 46069441  T
Q  118 gctcaaaacattacattccc 137  Q
     |||||||||||||||||||    
T  46069440 cctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 43955663 - 43955522
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| ||   ||||||||| || |||||| ||||||||    
T  43955663 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgcattctaa---tagaattcatcttaaagtagttgaattc 43955567  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  43955566 cctcaaaacattacattccctcaaaacattcccccatccaaacac 43955522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 43955527 - 43955668
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| || || |||| |    |||||| ||||| |||||| ||||||||    
T  43955527 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaagatgaattctat---tagaatgcaccttaaagtagttgaattc 43955623  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  43955624 cctcaaaacattacattccctcaaaacattcccccatccaaacac 43955668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 34388411 - 34388270
Alignment:
Q  21 atgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgct 120  Q
    |||| ||||| |||||||| |||||||| |||||||||||||||| || |||||||||  |||||||||| |||||||||| |||||| |||||||| ||    
T  34388411 atgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtagttgaattctct 34388312  T
Q  121 caaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    || |||||||| || |||||||| ||| || |||||||||||    
T  34388311 cagaacattacttttcctcaaaatatttccccatccaaacac 34388270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 49052796 - 49052936
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||||||  ||| |||||||| |||||||||||||||| |||||||| || |||||| || |||||||||||||||||||||| |||||| ||||||||    
T  49052796 tggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattc 49052894  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||| |||||||||| |||||||||||    
T  49052895 cctcaaaacattacatt-cctc-aaacattccc-catccaaacac 49052936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 44915205 - 44915324
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||| |||| |||||||| || |||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||| | |||| ||||||||    
T  44915205 tggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattc 44915304  T
Q  118 gctcaaaacattacattccc 137  Q
     |||||||||||| ||||||    
T  44915305 cctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 40110747 - 40110892
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaata-gaattcacctcaaagtaattgaatt 116  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    |  ||||||||||||||||| |||||||    
T  40110747 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaatt 40110846  T
Q  117 cgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    | ||||||||||||||||||||| ||||||| || |||||||||||    
T  40110847 ccctcaaaacattacattccctcgaaacatttccccatccaaacac 40110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 2057544 - 2057400
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||| || ||  ||||| |||  |    | ||| ||||||||||||| ||||||||    
T  2057544 tggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtagttgaattc 2057445  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||| |||||||||||||| |||||||||||    
T  2057444 cctcaaaacattacattcgctcaaaacattcccccatccaaacac 2057400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 5644695 - 5644831
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||  ||||||||| ||||||||||| |||||||    
T  5644695 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaataattgaattccctcaaaa 5644794  T
Q  126 cattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||| ||||||||| ||||| |||||||||||    
T  5644795 cattacattacctcaaaacgttcccccatccaaacac 5644831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 29065838 - 29065973
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaac 126  Q
    |||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||||| ||||||||||| ||||||||    
T  29065838 gaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaac 29065937  T
Q  127 attacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||| ||||||||||  |||||||||||    
T  29065938 attacattaccttaaaacattcctccatccaaacac 29065973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 31632809 - 31632727
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31632727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 23455222 - 23455301
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23455222 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacac 23455301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 26162112 - 26162191
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 26162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 35776930 - 35777009
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| ||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacac 35777009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 34388275 - 34388419
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || |||||||||||| || |||||||| |||| |||||||| || ||| ||||| |||| |    | ||| ||||||||||||| ||||||||    
T  34388275 tggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctcaaagtagttgaattc 34388374  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||| ||||||||||||||||||||||| |||| |||||||    
T  34388375 cctcaaaatattacattccctcaaaacattccatcattcaaacac 34388419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 28539143 - 28539222
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  28539143 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacac 28539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 49052911 - 49052791
Alignment:
Q  41 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| |||||||||||||||| |||||    
T  49052911 aatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacattacatt-cctca 49052813  T
Q  141 aaacattccctcatccaaacac 162  Q
    |||||||  |||||||||||||    
T  49052812 aaacattttctcatccaaacac 49052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 40854119 - 40854007
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgaggg-aattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaatt 116  Q
    |||||| || ||| || ||||| |||||||| ||||||||| ||||||| || |||||| || |||||||||||||||||||||| |||||| |||||||    
T  40854119 tggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaatt 40854020  T
Q  117 cgctcaaaacatt 129  Q
    | |||||||||||    
T  40854019 ccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 6498740 - 6498819
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 6498819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 39342617 - 39342696
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  39342617 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 39342696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 44915317 - 44915200
Alignment:
Q  45 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaac 144  Q
    ||||||||||||||||||||| || | | ||||| |||| |    | ||||||||||||||||| ||||||||  |||||||||||| |||||||||||     
T  44915317 taatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaa 44915218  T
Q  145 attccctcatccaaacac 162  Q
    |||| |||||||||||||    
T  44915217 attctctcatccaaacac 44915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 9784906 - 9784985
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| || |||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||  |||||||||||    
T  9784906 caaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacac 9784985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 14603237 - 14603316
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||| ||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  14603237 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 14603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 23548586 - 23548665
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||  ||||||||| |||||||||||||||||||||  |||||||||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacac 23548665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 25189201 - 25189280
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  ||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||||||| |||||||||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacac 25189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 35455888 - 35455809
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||| ||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  35455888 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 35455809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 43791174 - 43791094
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactct 165  Q
    |||||||| || |||||||||||||| |||||||| |||||||||||||||||||||  ||| || |||||||||||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctc--aacttttcctcatccaaacactct 43791094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 34398938 - 34399003
Alignment:
Q  98 acctcaaagtaattgaattcgc-tcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacac 34399003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 21636034 - 21635894
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || ||| |||||||| ||||||||||||||| |||||| || || |||||| || |||| |    | |||| ||||||||| ||||||||| |    
T  21636034 tggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataattgaatcc 21635935  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaa 158  Q
     |||||||||||||||| |||||||| |||| | |||||||    
T  21635934 cctcaaaacattacattacctcaaaatattctcccatccaa 21635894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 22391562 - 22391641
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  ||||||||||||| || || ||||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  22391562 caaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacac 22391641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 29639190 - 29639269
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||||||||| || |||||||  |||| ||||||||||||||| ||||||||||| |||||| ||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacac 29639269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 30629141 - 30629062
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||| ||||||| || ||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  30629141 caaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacac 30629062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 35777004 - 35776939
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  35777004 tggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 35776939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 40854007 - 40854124
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgc-tcaaaacattacattccctcaaaac 144  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| | |||||| |||||||||||||| |||    
T  40854007 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaac 40854106  T
Q  145 attccctcatccaaacac 162  Q
    ||| || |||||||||||    
T  40854107 atttccccatccaaacac 40854124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 18789221 - 18789300
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||||| |||||| |||||||| |||| ||||||| |||| ||||||| |||||  |||||||||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacac 18789300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 46069424 - 46069542
Alignment:
Q  41 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| || |||||| ||||||||||| |||  ||||||||||| ||||     
T  46069424 aatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataattgaattccctc--aacattacattacctc- 46069520  T
Q  141 aaacattccctcatccaaacac 162  Q
    ||| |||||| |||||||||||    
T  46069521 aaatattcccccatccaaacac 46069542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 3905634 - 3905699
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 148  Q
    |||||||||||||||||||||||||| ||||||||  | |||||||||  || |||||||||||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaattccttgaaaacattatttttcctcaaaacattc 3905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 23455296 - 23455231
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  23455296 tggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 23455231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 26162186 - 26162121
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  26162186 tggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 26162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 31632732 - 31632797
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  31632732 tggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 31632797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 30524339 - 30524275
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 147  Q
    ||||||||  |||||| | ||||||| |||||||| |||||||||||||||||| ||||||||||    
T  30524339 caaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacatt 30524275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 29639265 - 29639199
Alignment:
Q  17 atggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||| |||||| |||| ||| ||||||||||| ||||| ||||||| |||||||||||| ||||    
T  29639265 atggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattc 29639199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 46482071 - 46481978
Alignment:
Q  41 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattc 135  Q
    ||||||||||||||||  ||||||| ||||| ||| || ||||||||||||||||||| ||  || || || ||||  |||||||||||||||||    
T  46482071 aatgtaatgttttgagaaaattcaactattt-gagttgaattcaaacaatagaattcatcttcaaatagttaaatttcctcaaaacattacattc 46481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 28539217 - 28539152
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  28539217 tggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 28539152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 6498806 - 6498758
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  6498806 ggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 6498758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    ||||||| ||||||||||||||||| |||||||| |||  |||||||||||| ||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  110 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 158  Q
    |||||||| |||||||||||||||| || |||||||||||| |||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 25189275 - 25189219
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 74  Q
    |||||| |||||| |||||||| |||| |||||||||||||||||||| || |||||    
T  25189275 tggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttga 25189219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 34398998 - 34398938
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagg-gaattcaattattttgaggt 77  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  34398998 tggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgaggt 34398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 43791116 - 43791160
Alignment:
Q  34 ttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| ||||||||||||||||||||||||| || |||||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 43791160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 14790197 - 14790151
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||| |||| |||||||||||||||| |||||||| |||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 22391622 - 22391576
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||||| |||||||||||||||| ||||| || ||||||||||||    
T  22391622 ttttgagggaatgtaatgttttgagagaatttaaatattttgaggtg 22391576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 45984424 - 45984378
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  45984424 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 45988784 - 45988738
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  45988784 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 39342691 - 39342626
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  39342691 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 39342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 9784972 - 9784920
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    ||||| |||||||| |||||| |||||||||||||||||| || |||| ||||    
T  9784972 ggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtg 9784920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 29639119 - 29639167
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 141  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  29639119 aatttacctcaaagtatttgaattctctcataacattacatttcctcaa 29639167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 31632876 - 31632828
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 141  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  31632876 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 31632828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 15373979 - 15374114
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaac 126  Q
    |||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | |||| |||||||| ||||||||    
T  15373979 gaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaac 15374078  T
Q  127 attacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||| |||||||||||    
T  15374079 attacattccctcaaaacattcccccatccaaacac 15374114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 9764487 - 9764343
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| ||| |||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||||| ||||||||    
T  9764487 tggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattc 9764388  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||| ||||||||||| |||||| |||||||||||    
T  9764387 cctcaaaacattactttccctcaaaatattcccccatccaaacac 9764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 20523143 - 20523287
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| | |||| |||||||| |||||||| || ||||||||||||| || ||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  20523143 tggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattc 20523242  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||| |||||||||||||| |||||||||||    
T  20523243 cctcaaaacattacattctctcaaaacattcccccatccaaacac 20523287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 32390121 - 32389977
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||| || |||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| | |||| ||||||||    
T  32390121 tggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtagttgaattc 32390022  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||| |||||||||| |||||||||||||||||||||||||    
T  32390021 cctcaaaatattacattccttcaaaacattccctcatccaaacac 32389977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 2316514 - 2316383
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacc-tcaaagtaattgaattcgctcaaaacatta 130  Q
    |||||||| |||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| | |||||| |||||||| ||||||| ||||    
T  2316514 ttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatatta 2316415  T
Q  131 cattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||| |||||||||||    
T  2316414 cattccctcaaaacattcccccatccaaacac 2316383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 6634025 - 6634168
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||| ||    
T  6634025 tggatggggggatattttgaggtaatgtaatgttttgagggaattcaattatttcgag-tgaattcaaacaatagaattcacctcaaagtagttgaactc 6634123  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
      | |||| ||||||||||||| |||  ||||| |||||||||||    
T  6634124 ctttaaaatattacattccctcgaaatgttcccccatccaaacac 6634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 9764348 - 9764492
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||||| ||||||||    
T  9764348 tggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattc 9764447  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||| |||||||||| |||||||||||    
T  9764448 cctcaaaacattacattccctcgaaacattcccccatccaaacac 9764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 40643856 - 40643971
Alignment:
Q  46 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 145  Q
    |||||||||||||||||||| || |||||| |  |||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||    
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaaca 40643954  T
Q  146 ttccctcatccaaacac 162  Q
    ||||| |||||||||||    
T  40643955 ttcccccatccaaacac 40643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 32389982 - 32390126
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    ||||||||||||| |||||| | |||||||| |||||||||||||||| || | | ||||| |||| |  | | ||||||||||||||||| ||||||||    
T  32389982 tggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtagttgaattc 32390081  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||| |||| || ||||||||||    
T  32390082 cctcaaaacattacattccctcaaaaaattctctaatccaaacac 32390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 40809351 - 40809495
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| || ||| |||||||  ||| ||||||||||||||||||||| || |||||| || |||||||||||| ||||||||| ||||||  |||||||    
T  40809351 tggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtagctgaattc 40809450  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||| ||||||||||| || |||| ||||||    
T  40809451 actcaaaacattacattctctcaaaacatttccccatctaaacac 40809495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 28828496 - 28828417
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 97  Q
    |||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28828496 tggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 28828417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 32471015 - 32470902
Alignment:
Q  34 ttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 133  Q
    |||||| ||||||||||||||||||||||||| || |||||| || ||||||| ||||||||| |||| ||| || ||||||||  ||||||||||||||    
T  32471015 ttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacat 32470916  T
Q  134 tccctcaaaacatt 147  Q
    ||||||||||||||    
T  32470915 tccctcaaaacatt 32470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 15374109 - 15373965
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || | | ||||| |||| |    | ||||||||||||||||| ||||||||    
T  15374109 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattc 15374010  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||||||||||||||| ||||   |||||||||||    
T  15374009 cctcaaaacattacattccctcaaaaaattcttccatccaaacac 15373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 20523282 - 20523138
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||  ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||| ||||||||    
T  20523282 tggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattc 20523183  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||| || |||||||||||||||||||||| | |||||||||||    
T  20523182 cctcagaatattacattccctcaaaacattctcccatccaaacac 20523138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 22767036 - 22766957
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacac 22766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 37722880 - 37722959
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacac 37722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 2316388 - 2316518
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga-ggtggattcaaacaatagaattcacctcaaagtaattgaatt 116  Q
    |||||| |||||| |||||||| |||||||| |||||||||||||||| || ||| | |||| |||| |    | ||||||||||||||||| |||||||    
T  2316388 tggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaagtagttgaatt 2316487  T
Q  117 cgctcaaaacattacattccctcaaaacatt 147  Q
    | |||||||||||||||||||||||||||||    
T  2316488 ctctcaaaacattacattccctcaaaacatt 2316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 3563364 - 3563282
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  3563364 attcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacac 3563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 2721557 - 2721625
Alignment:
Q  94 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2721625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 23092111 - 23091979
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| ||||||   ||||||||||||||||||| ||||| || ||| || || ||||| | ||||||||||| || |||||| ||||||||    
T  23092111 tggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagtagttgaattc 23092012  T
Q  118 gctcaaaacattacattccctcaaaacattccc 150  Q
      |||||||||||||||||||||||| ||||||    
T  23092011 cttcaaaacattacattccctcaaaatattccc 23091979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 25935276 - 25935355
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||| |||||||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacac 25935355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 40090400 - 40090479
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacac 40090479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 16515099 - 16515172
Alignment:
Q  89 atagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacac 16515172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 32470906 - 32471015
Alignment:
Q  32 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 131  Q
    |||||||| ||||||||||||||| ||||||||| |||||| ||||  |||| |  | | ||||||| ||||||||| |||||||| |||||||||||||    
T  32470906 ttttgagggaatgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagtagttgaattccctcaaaacattac 32471005  T
Q  132 attccctcaa 141  Q
    ||||||||||    
T  32471006 attccctcaa 32471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 37145487 - 37145564
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaac 160  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 26281262 - 26281334
Alignment:
Q  90 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacac 26281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 927386 - 927307
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||| || |||||||||||    
T  927386 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacac 927307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 9894308 - 9894387
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||||||||| |||||||| ||   ||||||||||||||||||||||||||| |||||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacac 9894387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 19533893 - 19533972
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacac 19533972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 22303856 - 22303935
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 22303935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 41762201 - 41762280
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 41762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 15804397 - 15804327
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacac 15804327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 23091979 - 23092116
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 124  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || ||| || || |||| |      ||||||| || |||||| ||||| || ||||||    
T  23091979 gggaatattttgagggaatgtaatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagtagttgaactccctcaaa 23092078  T
Q  125 acattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||  ||||||||||||| |||||||||||    
T  23092079 acattacattcgttcaaaacattcccccatccaaacac 23092116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 32250084 - 32250162
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||| ||||| ||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacattccc-catccaaacac 32250162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 37722954 - 37722889
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  37722954 tggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 37722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 16515081 - 16515010
Alignment:
Q  90 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||| | |||||||||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattctc-catccaaacac 16515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 33245366 - 33245437
Alignment:
Q  91 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| || |||||| |||||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacac 33245437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 16515023 - 16515097
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacct 101  Q
    |||| |||||||| ||||||| ||||||||||||||||| |  ||||||||| |||| |||||||||||||||||    
T  16515023 gaatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtgaattctaacaatagaattcacct 16515097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 28828431 - 28828501
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 28828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 40809416 - 40809346
Alignment:
Q  92 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| ||||||||| |||||||| |||||||||||| |||| ||||||||||| || |||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacac 40809346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 13243514 - 13243469
Alignment:
Q  112 gaattcgctcaaaacattacattccctcaaaacattccctcatcca 157  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatcca 13243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2721620 - 2721560
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||||    
T  2721620 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 2721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 6634163 - 6634020
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||| |||| |||| |||||||| |||| | ||| ||||| || ||||||||| |||| |    | |||||||| || || |||||||||||    
T  6634163 tggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaattctattgtttgaattcac-tcgaaataattgaattc 6634065  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||| |||||||| || ||| |||||||||||    
T  6634064 cctcaaaacattacattacctcaaaatatccccccatccaaacac 6634020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 14834908 - 14834829
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||  |||||||||||||||| ||| |||| || |||||||||||||||||| |||||||| | ||| |||||||    
T  14834908 caaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacac 14834829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 20320634 - 20320713
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||  ||||||| |||||||| || |||| |||||||||| |||||||||||  ||||||||||||    
T  20320634 caaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacac 20320713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 28828415 - 28828372
Alignment:
Q  119 ctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  28828415 ctcaaaacattacattccctcaaaacattcccccatccaaacac 28828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 35379423 - 35379349
Alignment:
Q  87 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| ||||||| |||||| | |||||||| ||||||||||||||||  |||||||||||||| |||||||||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacattccc-catccaaacac 35379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 40643966 - 40643856
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||| | ||||||||| ||||||||    
T  40643966 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaaagtagttgaattc 40643868  T
Q  118 gctcaaaacatt 129  Q
     |||||||||||    
T  40643867 cctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 13243469 - 13243514
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattc 63  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||    
T  13243469 tggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 15804399 - 15804448
Alignment:
Q  113 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacac 15804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  80 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 40090474 - 40090409
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||||| || ||||||||| ||||    
T  40090474 tggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattc 40090409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 15804332 - 15804400
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaa 86  Q
    |||||| |||||| |||||||| |||||| |||||||||||||||||| || |||||| || |||||||    
T  15804332 tggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgagttgaattcaaa 15804400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 34982288 - 34982221
Alignment:
Q  94 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||  |||||||| |||||||||| |||||||||||||||||||||  ||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacac 34982221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 3563294 - 3563352
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  3563294 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 3563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 10314733 - 10314655
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 161  Q
    ||||||||||||||||| ||||| || |||||||| || |||| |||||||| | |||||||||| |  ||||||||||    
T  10314733 caaacaatagaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaaca 10314655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 16515167 - 16515102
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||||| |||| |||| ||| ||||||||||||||||||||||||| |  ||||||||| ||||    
T  16515167 tggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtgaattc 16515102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 22766962 - 22767027
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||| ||||||||||||||||||||| || ||| ||||| ||||    
T  22766962 tggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattc 22767027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 25935350 - 25935285
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| ||||||||||| ||||| ||||||| || ||||||||| ||||    
T  25935350 tggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattc 25935285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 26281329 - 26281264
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||  |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  26281329 tggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 26281264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacat 128  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 28828377 - 28828422
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattc 63  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||    
T  28828377 tggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 12991334 - 12991374
Alignment:
Q  119 ctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  12991334 ctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 19533959 - 19533907
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    ||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  19533959 ggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 19533907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 22303930 - 22303870
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  22303930 tggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 22303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 37145561 - 37145501
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 78  Q
    |||||| |||||| |||||||| ||||||||||| |||| |||||||| || |||||||||    
T  37145561 tggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtg 37145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 13243553 - 13243514
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagg 57  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  13243553 tggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 13243515 - 13243558
Alignment:
Q  119 ctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||| |||||||| |||||| |||||||||||    
T  13243515 ctcaaaacattacattacctcaaaatattcccccatccaaacac 13243558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8255045 - 8255091
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 72  Q
    |||||| ||| ||| ||||||||||||||||||||||||| ||||||    
T  8255045 ggaatactttaaggtaatgtaatgttttgagggaattcaaatatttt 8255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 35111310 - 35111256
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 137  Q
    |||||||||||| |||| ||||| || ||||||||  ||||||||||||||||||    
T  35111310 caaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattccc 35111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattc 135  Q
    |||||| ||||||||| |||||||| |||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 927312 - 927377
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| || ||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  927312 tggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 9894382 - 9894317
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||||||||   ||||||||||| || ||||||||| ||||    
T  9894382 tggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaattc 9894317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 17492634 - 17492679
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacat 128  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||    
T  17492634 caaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 28103921 - 28103994
Alignment:
Q  225 agttctttgtggcttttagcgttgtt-cagaattgtgaggtgcagcggctgctactcggttgttcttctagcct 297  Q
    |||||| ||||| ||||||| ||||| |||||||||||||||| | ||||| | || |||| ||||||||||||    
T  28103921 agttctatgtggattttagcattgtttcagaattgtgaggtgcggaggctgatgcttggttattcttctagcct 28103994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 28489546 - 28489505
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaa 125  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  28489546 aaacaatggaattcacctcaaagtatttgaattctctcaaaa 28489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 41762275 - 41762210
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  41762275 tggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 41762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||||||| |||||||| |||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 5658821 - 5658781
Alignment:
Q  122 aaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||| |  |||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacac 5658781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 13064957 - 13064997
Alignment:
Q  119 ctcaaaacattacattccctcaaaacattccctcatccaaa 159  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  13064957 ctcaaaacattactttacgtcaaaacattccctcatccaaa 13064997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 15804443 - 15804399
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaatt 62  Q
    |||||| || ||| |||||||| ||||||||||||||||||||||    
T  15804443 tggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 28101163 - 28101235
Alignment:
Q  225 agttctttgtggcttttagcgttgtt-cagaattgtgaggtgcagcggctgctactcggttgttcttctagcc 296  Q
    |||||| ||||| |||||||| |||| || ||||||||||| | | ||||||| || ||||||||||||||||    
T  28101163 agttctatgtggtttttagcgatgtttcaaaattgtgaggtacggaggctgctgcttggttgttcttctagcc 28101235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 32250151 - 32250111
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| |||||||| || ||||||||||||||||||||||    
T  32250151 gggaatgttttgagggaaagtaatgttttgagggaattcaa 32250111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 35379360 - 35379400
Alignment:
Q  25 gggaatattttgaggcaatgtaatgttttgagggaattcaa 65  Q
    |||||| |||||||  |||||||||||||||||||||||||    
T  35379360 gggaatgttttgagataatgtaatgttttgagggaattcaa 35379400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 56307 - 56428
Alignment:
Q  41 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 140  Q
    ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  56307 aatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctca 56406  T
Q  141 aaacattccctcatccaaacac 162  Q
    ||| ||||||||||||||||||    
T  56407 aaatattccctcatccaaacac 56428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 56423 - 56304
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||||| ||||||||    
T  56423 tggatgagggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattc 56324  T
Q  118 gctcaaaacattacattccc 137  Q
     |||||||||||||||||||    
T  56323 cctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 554 - 410
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||   ||||| ||||||||    
T  554 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattc 455  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||  ||||||||||| |||||| |||||||||||    
T  454 cctcaaaacattattttccctcaaaatattcccccatccaaacac 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 415 - 559
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||| || ||   |||| |||| |    | ||| ||||||||||||| ||||||||    
T  415 tggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtagttgaattc 514  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  515 cctcaaaacattacattccctcaaaacattcccccatccaaacac 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 2039 - 2183
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||   ||||| ||||||||    
T  2039 tggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattc 2138  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     ||||||||||||  ||||||||||| |||||| |||||||||||    
T  2139 cctcaaaacattattttccctcaaaatattcccccatccaaacac 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 2178 - 2034
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattc 117  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||| || ||   |||| |||| |    | ||| ||||||||||||| ||||||||    
T  2178 tggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtagttgaattc 2079  T
Q  118 gctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  2078 cctcaaaacattacattccctcaaaacattcccccatccaaacac 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 4159 - 4080
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacac 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 4093 - 4150
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||  ||||||||||||||||||||||||| || ||||||||| ||||    
T  4093 ggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattc 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 83025 - 82943
Alignment:
Q  85 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactctga 167  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacactga 82943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 82953 - 83018
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  82953 tggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 83018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 42076 - 42002
Alignment:
Q  88 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 42002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 42080 - 42132
Alignment:
Q  110 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacac 42132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 42015 - 42072
Alignment:
Q  26 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  42015 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 42072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 4487 - 4566
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| |||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacac 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 4561 - 4496
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||| |||| ||||    
T  4561 tggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 5131 - 5210
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||| |||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacac 5210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 5205 - 5140
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    ||||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||| |||| ||||    
T  5205 tggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 5140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 19280 - 19203
Alignment:
Q  84 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    ||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattc-ctcaaaacattacattccctcaaaatactcccccatccaaacac 19203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 19784 - 19852
Alignment:
Q  93 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||||||||||| |||||||  || |||||||||||||||||||||||| |||| |||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacac 19852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19208 - 19272
Alignment:
Q  18 tggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||||| |||| |||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||    
T  19208 tggatgggggagtattttgagggaatgtaatgttttga-ggaattcaaatattttgaggtgaattc 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 10970 - 10905
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 148  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattc 10905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 10905 - 10961
Alignment:
Q  27 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 83  Q
    |||| |||| ||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  10905 gaatgttttaagggaatgtaatgttttgagggaattcaaatactttgacgtgaattc 10961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 2950 - 2872
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||||||||| ||| |||||||||| |||| ||||||    
T  2950 caaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacac 2872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 7235 - 7156
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||  ||||||| |||||||| || |||||| |||||||||||||||||||||  |||||||||||    
T  7235 caaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacac 7156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 15855 - 15931
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| |||| |||||||||||    
T  15855 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacac 15931  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 2897 - 2973
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 162  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| |||| |||||||||||    
T  2897 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacac 2973  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 17561 - 17620
Alignment:
Q  70 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 129  Q
    |||||||||||  ||||||||| ||| |||||||||| | |||||||| |||||||||||    
T  17561 tttgaggtggaaccaaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

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Target: scaffold0449 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 4312 - 4342
Alignment:
Q  165 tgagggatttttgagggaatttataccttta 195  Q
    |||||||||||||||||||||||||||||||    
T  4312 tgagggatttttgagggaatttataccttta 4342  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 130438 - 130388
Alignment:
Q  83 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 133  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  130438 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 130388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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