View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21269_high_21 (Length: 307)
Name: NF21269_high_21
Description: NF21269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21269_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 23 - 302
Target Start/End: Complemental strand, 41640568 - 41640289
Alignment:
| Q |
23 |
agttatagtgtattttgggaaggttatagttgcgtgttatgtccctattgggagtcttggagtcctttgattatgtggtgctgttttatcgtggaaacaa |
122 |
Q |
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| T |
41640568 |
agttatagtgtattttgggaaggttatagttgcgtgttatgtccctattgggagtcttggagtcctttgattatgtggtgctgttttatcgtggaaacaa |
41640469 |
T |
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| Q |
123 |
ttccttattttgggtacaagctagataatgcattttttggattggattcgtccctccaactgaaatgtggttcccttactttttagttttgagttatata |
222 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41640468 |
ttccttattttgagtacaagctagataatgcattttttggattggattcgtccctcaaactgaaatgtggttcccttactttttagttttgagttatata |
41640369 |
T |
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| Q |
223 |
tggaccaatggaaattctttagtgtgttgtaaaattgtgggtcatatttttgtttccacacttcatatccctatgctact |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
41640368 |
tggaccaatggaaattctttagtgtgttgtaaaattgtgggtcatatttttgttaccacacttcatatccctatgatact |
41640289 |
T |
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