View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21269_high_34 (Length: 214)
Name: NF21269_high_34
Description: NF21269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21269_high_34 |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 11710735 - 11710568
Alignment:
| Q |
12 |
tatcacaaaaagaacccctaaaacattgaatgtgcaggcaaaggttcttactagcaattcgcatgaagacttttagtactggaaagattttagatagtat |
111 |
Q |
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| T |
11710735 |
tatcacaaaaagaacccctaaaacattgaatgtgcaggcaaacgttcttactagcaattcacatgaagacttttagtactggaaagattttagatagtat |
11710636 |
T |
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| Q |
112 |
gataacacaatatgtgcctagaacaatagaaaaatttaaaaccataagcagagcttccacgatttttt |
179 |
Q |
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| T |
11710635 |
gataacacaatatgtgcctagaacaatagaaaaatttaaaaccataagcagagcttccatgatttttt |
11710568 |
T |
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