View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21269_low_28 (Length: 264)
Name: NF21269_low_28
Description: NF21269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21269_low_28 |
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Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7594722 - 7594971
Alignment:
| Q |
1 |
gctagagtgagtgcacataacacaacaaaattaaga----aataaagaaatgttattacctttgtacatcttgtacaacaagttcagggtcttgaactga |
96 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7594722 |
gctagagtgagtgcacataacacaacaaaattaagaaagaaataaagaaatgttattacctttgtacatcttgtacaacaagttcagggtcttgaactga |
7594821 |
T |
|
| Q |
97 |
agaggatgaaacaaaatttgggattagaagagcaaaaagaatgagaaagtatgaaagaaaagtcatannnnnnnggaagagtaattgaagggaatgagac |
196 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
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| T |
7594822 |
agaggatgaaacaaaatttgggattaaaagagcaaaaagaatgagaaagtatgaaagaaaagtcatatttttttggaagagtaattgaagggtatgagac |
7594921 |
T |
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| Q |
197 |
ttagaaagatagtttgtggtgaagttggagggtgaataaaggagttttat |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7594922 |
ttagaaagatagtttgtggtgaagttggagggtgaataaaggagttttat |
7594971 |
T |
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