View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21269_low_33 (Length: 240)
Name: NF21269_low_33
Description: NF21269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21269_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 33841239 - 33841444
Alignment:
| Q |
20 |
tgaaattggattgatccagaattttcacatattcgccatgcaatcagagtcaatggttgttttccgatcccacacaaagaacatagtttaatttttatgg |
119 |
Q |
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| T |
33841239 |
tgaaattggattgatccagaattttcacatattcgccatgcaatcagagtcaatggttgttttccgatctcacacaaaaaacatagtttaatttttatgg |
33841338 |
T |
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| Q |
120 |
tatatacgttaaaataccgtgcgaaaattaacaccttccaattatggtttaatgatcaatgtcgatgaccaaatgctttcgataccgatacgcaacgggg |
219 |
Q |
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| T |
33841339 |
tatatacgttaaaataccgtgcgaaaattaacaccttccaattttggtttaatgatcaatgtcgatgaccaaatgctttcgatatcgatacgcaacgggg |
33841438 |
T |
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| Q |
220 |
gagcat |
225 |
Q |
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|||||| |
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| T |
33841439 |
gagcat |
33841444 |
T |
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