View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2126_high_16 (Length: 299)
Name: NF2126_high_16
Description: NF2126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2126_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 38 - 280
Target Start/End: Complemental strand, 31119051 - 31118810
Alignment:
| Q |
38 |
acattttaaaagtaagttaaataattaacttacaacttgtatatacgtatatatggtttatactattttaattgttttggggttgccatgactaccccat |
137 |
Q |
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| T |
31119051 |
acattttaagagtaagttaaataattaacttacaacttgtatatacgtatatatggtttatactattttaattgttttggggttgccatgactaccccat |
31118952 |
T |
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| Q |
138 |
agctatgggaagtgtccctccctaaatagggacatagatcatctacaatggttttatggtgtagaacagttagtttaagatgaaataccagtagctaggt |
237 |
Q |
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| T |
31118951 |
agctatgggaagtgtccctccctaaatagggacatagatcatctacaatggttttatggtgtagaacagttagtttaagatgaaataccagtagctaggt |
31118852 |
T |
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| Q |
238 |
caaaagttagaagaacttagaaacaatatctatgacatatttc |
280 |
Q |
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| T |
31118851 |
c-aaagttagaagaacttagaaacaatatctatgacatatttc |
31118810 |
T |
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