View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2126_high_17 (Length: 269)
Name: NF2126_high_17
Description: NF2126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2126_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 1251346 - 1251583
Alignment:
| Q |
14 |
agaggtcaacaattcctctttggtttggctttggagttaggtttggttgtagactttttgaataagaccaaaacaatattaaacactagctttactttct |
113 |
Q |
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| T |
1251346 |
agaggtcaacaattcctctttggtttggctttggagttaggtttggttgtagactttttgaataagaccaaaacaatattaaacactagctttactttct |
1251445 |
T |
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| Q |
114 |
ctcttcaattcctctctacaaattactaagatattgaaagttcnnnnnnnnnnnnngtctttcctccaaaccaaaacttggtttccatcataagaaatca |
213 |
Q |
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| T |
1251446 |
ctcttcaattcctctctacaaattactaagatattgaaagttctttttttcttttttcctttcctccaaaccaaaacttggtttccatcataagaaatca |
1251545 |
T |
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| Q |
214 |
tagcccaaattacatcaacaagaattatggtgagtatt |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
1251546 |
tagcccaaattacatcaacaagaattatggtgagtatt |
1251583 |
T |
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