View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21270_low_1 (Length: 831)

Name: NF21270_low_1
Description: NF21270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21270_low_1
NF21270_low_1
[»] chr3 (39 HSPs)
chr3 (455-801)||(24618637-24618983)
chr3 (13-283)||(24619325-24619595)
chr3 (282-434)||(24619051-24619203)
chr3 (430-597)||(1923117-1923278)
chr3 (436-594)||(46194123-46194280)
chr3 (430-560)||(1334732-1334861)
chr3 (429-594)||(38600723-38600887)
chr3 (431-566)||(44218979-44219112)
chr3 (459-582)||(36790750-36790872)
chr3 (430-556)||(48409611-48409738)
chr3 (437-594)||(51164986-51165142)
chr3 (503-594)||(30261420-30261509)
chr3 (436-543)||(41287295-41287402)
chr3 (467-594)||(26479785-26479918)
chr3 (503-556)||(9218244-9218297)
chr3 (431-556)||(21296458-21296582)
chr3 (429-561)||(9017827-9017958)
chr3 (502-594)||(17776911-17777002)
chr3 (502-594)||(19078212-19078303)
chr3 (436-556)||(39329705-39329824)
chr3 (501-564)||(2868672-2868734)
chr3 (437-539)||(54021429-54021531)
chr3 (431-559)||(54122176-54122303)
chr3 (514-588)||(39144770-39144845)
chr3 (435-558)||(53051058-53051180)
chr3 (437-540)||(53754034-53754137)
chr3 (436-594)||(5245445-5245602)
chr3 (516-594)||(36315651-36315729)
chr3 (450-540)||(38524263-38524352)
chr3 (436-577)||(32977724-32977864)
chr3 (537-594)||(38215761-38215818)
chr3 (430-594)||(21585327-21585490)
chr3 (429-556)||(42547061-42547187)
chr3 (501-564)||(51636843-51636905)
chr3 (539-577)||(26832197-26832235)
chr3 (526-588)||(34081017-34081079)
chr3 (475-560)||(39866504-39866588)
chr3 (431-556)||(43639471-43639595)
chr3 (521-566)||(47684858-47684903)
[»] chr1 (71 HSPs)
chr1 (632-831)||(29051806-29052005)
chr1 (430-596)||(29756057-29756223)
chr1 (429-594)||(26583754-26583919)
chr1 (430-559)||(37541065-37541194)
chr1 (430-594)||(24131318-24131481)
chr1 (436-594)||(26924037-26924195)
chr1 (282-362)||(29051305-29051385)
chr1 (451-594)||(3160604-3160747)
chr1 (177-277)||(29051074-29051174)
chr1 (436-589)||(46363332-46363486)
chr1 (445-595)||(50926789-50926939)
chr1 (436-560)||(5503453-5503575)
chr1 (430-594)||(29225322-29225489)
chr1 (436-561)||(37925192-37925321)
chr1 (436-589)||(40754336-40754488)
chr1 (445-561)||(16956585-16956701)
chr1 (436-594)||(34813950-34814107)
chr1 (436-594)||(27932746-27932908)
chr1 (430-594)||(4466072-4466235)
chr1 (508-588)||(26760381-26760461)
chr1 (430-564)||(16040104-16040237)
chr1 (436-533)||(31798451-31798546)
chr1 (436-583)||(3718779-3718924)
chr1 (431-594)||(11425787-11425949)
chr1 (460-589)||(14090697-14090822)
chr1 (433-539)||(36232761-36232867)
chr1 (514-594)||(2886323-2886403)
chr1 (436-560)||(10587533-10587656)
chr1 (437-580)||(25983565-25983702)
chr1 (436-558)||(27209921-27210042)
chr1 (436-557)||(705303-705424)
chr1 (459-595)||(36326122-36326257)
chr1 (431-594)||(2219366-2219528)
chr1 (440-559)||(13409730-13409849)
chr1 (459-558)||(28706577-28706675)
chr1 (429-576)||(32348244-32348390)
chr1 (430-539)||(14352593-14352705)
chr1 (501-558)||(4659529-4659585)
chr1 (435-539)||(37495861-37495963)
chr1 (436-564)||(27391380-27391507)
chr1 (510-566)||(34332217-34332272)
chr1 (436-556)||(40061842-40061961)
chr1 (503-559)||(40988450-40988506)
chr1 (501-561)||(49494114-49494173)
chr1 (452-564)||(49944981-49945092)
chr1 (435-559)||(50267391-50267514)
chr1 (435-539)||(51049540-51049643)
chr1 (503-566)||(7224500-7224563)
chr1 (593-632)||(29051382-29051421)
chr1 (429-594)||(29225779-29225942)
chr1 (436-519)||(33149306-33149389)
chr1 (445-561)||(44580558-44580676)
chr1 (437-547)||(45889212-45889322)
chr1 (458-559)||(50773301-50773399)
chr1 (436-494)||(2886204-2886262)
chr1 (437-559)||(21304760-21304880)
chr1 (445-539)||(9590554-9590650)
chr1 (475-564)||(40019831-40019919)
chr1 (436-560)||(32587798-32587921)
chr1 (501-561)||(36467146-36467205)
chr1 (429-564)||(28839365-28839499)
chr1 (502-564)||(5040523-5040584)
chr1 (501-559)||(5442438-5442495)
chr1 (498-560)||(6787342-6787403)
chr1 (435-537)||(12267605-12267707)
chr1 (503-564)||(25418743-25418802)
chr1 (509-566)||(39420692-39420750)
chr1 (511-556)||(2571469-2571514)
chr1 (522-567)||(18186142-18186187)
chr1 (429-557)||(27831872-27831997)
chr1 (497-561)||(37525134-37525195)
[»] chr8 (47 HSPs)
chr8 (632-831)||(1354819-1355017)
chr8 (632-831)||(1344545-1344744)
chr8 (430-594)||(14689987-14690151)
chr8 (436-583)||(8394180-8394329)
chr8 (436-594)||(33743809-33743967)
chr8 (436-594)||(14748620-14748780)
chr8 (459-594)||(32231302-32231437)
chr8 (438-561)||(45420888-45421011)
chr8 (445-561)||(1494197-1494313)
chr8 (436-576)||(25174519-25174659)
chr8 (58-216)||(1344916-1345072)
chr8 (430-576)||(5392076-5392221)
chr8 (436-561)||(886397-886522)
chr8 (430-583)||(8566041-8566191)
chr8 (429-556)||(2195494-2195620)
chr8 (436-583)||(39998196-39998342)
chr8 (429-564)||(42412330-42412464)
chr8 (645-722)||(10043378-10043455)
chr8 (437-558)||(29638335-29638455)
chr8 (431-539)||(14117490-14117598)
chr8 (436-594)||(29451382-29451540)
chr8 (435-558)||(28791340-28791462)
chr8 (437-556)||(40077705-40077823)
chr8 (436-565)||(27868271-27868399)
chr8 (435-588)||(27973609-27973761)
chr8 (435-588)||(28030878-28031030)
chr8 (445-560)||(9734119-9734232)
chr8 (503-594)||(2797139-2797230)
chr8 (429-564)||(7258314-7258448)
chr8 (521-591)||(8840445-8840514)
chr8 (437-555)||(15559086-15559203)
chr8 (430-584)||(37459377-37459521)
chr8 (435-599)||(41726553-41726714)
chr8 (503-594)||(36011909-36012001)
chr8 (291-338)||(1354159-1354206)
chr8 (488-566)||(325028-325105)
chr8 (435-561)||(29615830-29615955)
chr8 (435-533)||(41759607-41759705)
chr8 (505-594)||(2875005-2875094)
chr8 (436-553)||(5423122-5423238)
chr8 (445-557)||(26677115-26677227)
chr8 (436-560)||(139055-139178)
chr8 (436-571)||(11637173-11637308)
chr8 (501-564)||(37703085-37703147)
chr8 (436-539)||(5878196-5878300)
chr8 (479-561)||(12653763-12653844)
chr8 (436-554)||(28802800-28802917)
[»] chr4 (49 HSPs)
chr4 (430-594)||(28330821-28330985)
chr4 (435-583)||(8759811-8759959)
chr4 (430-594)||(20964204-20964368)
chr4 (430-594)||(37315838-37316002)
chr4 (436-557)||(38319944-38320065)
chr4 (436-583)||(32949775-32949923)
chr4 (430-560)||(42132840-42132972)
chr4 (436-561)||(49218732-49218856)
chr4 (436-580)||(53848679-53848823)
chr4 (436-560)||(48400582-48400705)
chr4 (436-560)||(22020462-22020584)
chr4 (433-594)||(25902378-25902539)
chr4 (503-594)||(5499349-5499440)
chr4 (475-594)||(54217441-54217562)
chr4 (436-594)||(22872303-22872462)
chr4 (430-539)||(42051627-42051736)
chr4 (509-580)||(18872585-18872656)
chr4 (436-567)||(47277625-47277756)
chr4 (436-576)||(4360343-4360482)
chr4 (494-594)||(41594764-41594864)
chr4 (429-576)||(33047518-33047664)
chr4 (436-559)||(34790903-34791026)
chr4 (436-577)||(39052835-39052975)
chr4 (432-596)||(28279866-28280029)
chr4 (436-556)||(41436514-41436633)
chr4 (512-588)||(46958828-46958904)
chr4 (501-576)||(8295127-8295201)
chr4 (435-558)||(29550680-29550802)
chr4 (429-564)||(41203763-41203897)
chr4 (522-567)||(36045994-36046039)
chr4 (436-564)||(49448874-49448999)
chr4 (503-559)||(13529961-13530017)
chr4 (429-576)||(42024136-42024282)
chr4 (436-494)||(36047116-36047174)
chr4 (531-588)||(11583647-11583704)
chr4 (429-564)||(40020892-40021029)
chr4 (508-564)||(12619792-12619847)
chr4 (436-564)||(17237076-17237203)
chr4 (436-564)||(38160099-38160226)
chr4 (435-486)||(10099749-10099800)
chr4 (429-588)||(35027420-35027578)
chr4 (436-539)||(35998088-35998191)
chr4 (429-564)||(41710091-41710225)
chr4 (521-559)||(1920846-1920884)
chr4 (431-556)||(25149479-25149604)
chr4 (436-557)||(54729434-54729558)
chr4 (439-540)||(13719811-13719912)
chr4 (437-534)||(49306621-49306718)
chr4 (433-546)||(49401686-49401798)
[»] chr2 (48 HSPs)
chr2 (430-594)||(13222095-13222259)
chr2 (431-594)||(314455-314618)
chr2 (436-589)||(6972462-6972614)
chr2 (436-594)||(4282934-4283093)
chr2 (445-583)||(928466-928603)
chr2 (436-560)||(2048325-2048448)
chr2 (429-560)||(43950399-43950529)
chr2 (435-560)||(9724910-9725034)
chr2 (430-601)||(37528981-37529151)
chr2 (430-564)||(2427387-2427521)
chr2 (430-565)||(38872867-38873000)
chr2 (436-583)||(7213508-7213654)
chr2 (429-592)||(43427005-43427167)
chr2 (435-558)||(24356143-24356265)
chr2 (514-576)||(5425969-5426031)
chr2 (436-566)||(10069530-10069659)
chr2 (448-559)||(38280148-38280258)
chr2 (435-556)||(18181168-18181288)
chr2 (437-524)||(31348545-31348632)
chr2 (435-597)||(39166606-39166771)
chr2 (497-564)||(45464162-45464228)
chr2 (430-532)||(1908472-1908574)
chr2 (436-558)||(18460521-18460642)
chr2 (436-558)||(36748181-36748302)
chr2 (430-557)||(3199925-3200049)
chr2 (488-565)||(14384057-14384133)
chr2 (436-556)||(31592583-31592703)
chr2 (436-576)||(9472455-9472594)
chr2 (501-564)||(32556270-32556330)
chr2 (429-559)||(2756700-2756829)
chr2 (501-583)||(6213778-6213859)
chr2 (459-559)||(14890373-14890470)
chr2 (504-564)||(883100-883159)
chr2 (501-560)||(8550593-8550651)
chr2 (448-567)||(12949908-12950026)
chr2 (501-564)||(28527062-28527124)
chr2 (501-560)||(40965112-40965170)
chr2 (501-564)||(44736964-44737026)
chr2 (445-559)||(3123688-3123801)
chr2 (511-557)||(5007194-5007240)
chr2 (473-559)||(43077678-43077763)
chr2 (521-571)||(44024825-44024875)
chr2 (436-534)||(44424241-44424337)
chr2 (501-561)||(435026-435087)
chr2 (498-594)||(10394202-10394295)
chr2 (536-577)||(14306031-14306072)
chr2 (501-566)||(39159717-39159780)
chr2 (501-566)||(39209414-39209477)
[»] chr6 (20 HSPs)
chr6 (430-583)||(15371791-15371943)
chr6 (436-594)||(15325180-15325337)
chr6 (436-583)||(15321153-15321299)
chr6 (436-581)||(15355608-15355752)
chr6 (436-594)||(34803621-34803781)
chr6 (435-594)||(33921386-33921544)
chr6 (436-583)||(15351311-15351457)
chr6 (438-540)||(3166078-3166180)
chr6 (429-581)||(31075854-31076005)
chr6 (437-540)||(3874020-3874123)
chr6 (430-561)||(4552936-4553059)
chr6 (510-594)||(16126318-16126402)
chr6 (431-559)||(3604552-3604679)
chr6 (501-561)||(15081521-15081580)
chr6 (497-561)||(33109467-33109530)
chr6 (458-545)||(20027637-20027724)
chr6 (498-564)||(7739465-7739530)
chr6 (503-589)||(20383944-20384030)
chr6 (431-557)||(31265807-31265932)
chr6 (430-496)||(33017958-33018024)
[»] chr7 (43 HSPs)
chr7 (430-594)||(32776010-32776174)
chr7 (435-594)||(29996945-29997104)
chr7 (440-590)||(47238254-47238404)
chr7 (430-594)||(37264340-37264502)
chr7 (436-560)||(32971968-32972092)
chr7 (440-560)||(23111039-23111159)
chr7 (436-544)||(10355701-10355809)
chr7 (430-526)||(38589761-38589857)
chr7 (445-580)||(8150001-8150135)
chr7 (435-558)||(45218111-45218233)
chr7 (436-558)||(2849288-2849409)
chr7 (503-589)||(33773965-33774051)
chr7 (436-565)||(43007927-43008057)
chr7 (430-558)||(30659433-30659560)
chr7 (436-559)||(9602894-9603017)
chr7 (436-559)||(9830465-9830588)
chr7 (436-594)||(34064248-34064405)
chr7 (452-565)||(6697130-6697242)
chr7 (445-561)||(21446478-21446594)
chr7 (504-583)||(39143601-39143680)
chr7 (479-601)||(27621913-27622035)
chr7 (436-546)||(36070138-36070247)
chr7 (503-559)||(9658937-9658993)
chr7 (501-576)||(11616660-11616733)
chr7 (430-514)||(18731466-18731550)
chr7 (480-564)||(45890805-45890888)
chr7 (437-539)||(39343644-39343744)
chr7 (494-559)||(5724660-5724724)
chr7 (431-559)||(7425829-7425957)
chr7 (482-566)||(36194599-36194684)
chr7 (436-556)||(3667832-3667951)
chr7 (663-719)||(13590862-13590918)
chr7 (726-817)||(13590644-13590735)
chr7 (436-519)||(24288456-24288539)
chr7 (429-564)||(29257573-29257707)
chr7 (436-559)||(37490570-37490692)
chr7 (498-566)||(39498768-39498838)
chr7 (501-576)||(44604413-44604487)
chr7 (514-552)||(37496354-37496392)
chr7 (501-558)||(23058916-23058972)
chr7 (536-577)||(31549556-31549597)
chr7 (429-534)||(33584589-33584694)
chr7 (504-561)||(49100453-49100509)
[»] chr5 (40 HSPs)
chr5 (437-594)||(5147413-5147570)
chr5 (436-594)||(38978937-38979095)
chr5 (430-577)||(13016298-13016444)
chr5 (436-594)||(15564810-15564963)
chr5 (436-577)||(13087676-13087816)
chr5 (430-596)||(5357733-5357898)
chr5 (438-560)||(42818938-42819060)
chr5 (446-582)||(4194975-4195112)
chr5 (436-581)||(31090337-31090482)
chr5 (431-594)||(16926006-16926171)
chr5 (430-594)||(39060340-39060503)
chr5 (430-583)||(25111078-25111229)
chr5 (430-583)||(25170169-25170320)
chr5 (436-596)||(31196352-31196512)
chr5 (429-560)||(11099429-11099559)
chr5 (430-583)||(25108600-25108751)
chr5 (430-583)||(25167692-25167843)
chr5 (437-594)||(39060868-39061028)
chr5 (436-533)||(15898224-15898321)
chr5 (434-495)||(7871344-7871405)
chr5 (430-578)||(35988661-35988808)
chr5 (431-559)||(42575591-42575718)
chr5 (435-557)||(4044433-4044553)
chr5 (436-566)||(6172926-6173055)
chr5 (437-566)||(7311128-7311254)
chr5 (430-558)||(36006849-36006973)
chr5 (516-589)||(6629318-6629391)
chr5 (440-594)||(35666922-35667073)
chr5 (536-594)||(22983076-22983134)
chr5 (521-594)||(792095-792168)
chr5 (480-564)||(41594795-41594878)
chr5 (501-564)||(858433-858495)
chr5 (501-560)||(3725284-3725342)
chr5 (531-594)||(15898605-15898668)
chr5 (509-560)||(25344692-25344742)
chr5 (509-548)||(35012812-35012851)
chr5 (445-540)||(35968762-35968857)
chr5 (501-564)||(42211427-42211489)
chr5 (516-566)||(39212500-39212550)
chr5 (435-564)||(33988232-33988360)
[»] scaffold0576 (1 HSPs)
scaffold0576 (436-581)||(598-742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (437-583)||(10717-10864)
[»] scaffold0155 (1 HSPs)
scaffold0155 (470-594)||(7838-7960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (437-561)||(12385-12509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (501-576)||(98923-98997)
[»] scaffold0003 (1 HSPs)
scaffold0003 (435-559)||(352415-352536)
[»] scaffold0578 (1 HSPs)
scaffold0578 (511-557)||(4438-4484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (444-561)||(9503-9618)
[»] scaffold0086 (1 HSPs)
scaffold0086 (436-557)||(5851-5969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (458-524)||(158068-158134)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 455 - 801
Target Start/End: Complemental strand, 24618983 - 24618637
Alignment:
Q  455 ttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtga 554  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24618983 ttgtatttatgctaaagaagaatacaccactagttgataaaggcacttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtga 24618884  T
Q  555 aatgagcaaaaggttcagttaaaatgggagggaggaagtacttttttgggcaattaaacgttttaggacttgaatatttgagaggacaccctaaatctaa 654  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24618883 aacgagcaaaaggttcagttaaaatgggagggagaaagtacttttttgggcaattaaacgttataggacttgaatatttgagaggacaccctaaatctaa 24618784  T
Q  655 agcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaattatgaattttctaattacctctg 754  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||     
T  24618783 agcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatcagaaacaaagtgactactaattatgaattttctaattacctcta 24618684  T
Q  755 gaaaactttgtaaatttgagaattattaacattgagaaaccgaaaag 801  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24618683 gaaaactttgtaaatttgagaattattaacattgagaaaccgaaaag 24618637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 283
Target Start/End: Complemental strand, 24619595 - 24619325
Alignment:
Q  13 gagatgaaccatgataataatcaacagttaggtcgggaagttggttctgaccaatgattttttcgactaggtttcaactcggattctcttaaacgatgga 112  Q
    |||||| ||||||||||||||||||| || ||  |||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  24619595 gagatggaccatgataataatcaacaatttggctgggaggttggttttgaccaatgattttttcgactaggttttaattcggattctcttaaacgatgga 24619496  T
Q  113 agggcaaaagtgaaataaattatcccaatattatctaaattgaatattacactaaaatcaaccaaaaagtcaaaataaataaaagtatgaatttgaacta 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24619495 agggcaaaagtgaaataaatgatcccaatattatctaaattgaatactccactaaaatcaaccaaaaagtcaagataaataaaagtatgaatttgaacta 24619396  T
Q  213 agaactggttacatctacagcaatcagtcaatggctaaagtttcttcatgtgaaactaaaataatgaacta 283  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24619395 agaactggttacatctagagcaatcaatcaatggctaaagtttcttcatgtgaaactaaaataatgaacta 24619325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 282 - 434
Target Start/End: Complemental strand, 24619203 - 24619051
Alignment:
Q  282 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtactccctccgtctcatactaac 381  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24619203 tattaggaacagagcaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtactccctccgtctcatactaac 24619104  T
Q  382 cgagtcatttgcnnnnnnnnntattgtcataaaataattgatccatttcactt 434  Q
     |||||||||||         |||||||  |||||||||||||||||||||||    
T  24619103 tgagtcatttgcaaaaaacaatattgtcgcaaaataattgatccatttcactt 24619051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 430 - 597
Target Start/End: Original strand, 1923117 - 1923278
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| |||||| ||||||||| ||||    |||||||||||||||   ||||||||    
T  1923117 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaacagttgataagggcac---aaaccatttttctctt--tttcactt 1923211  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactt 597  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||||| ||||| |||||||    
T  1923212 atacactttttcttaataagtgtgaaatgagc-aagggctcagttaaaatgggacggagggagtactt 1923278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 46194280 - 46194123
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| |||||| || | |||||| ||||||||| |||| | ||| ||||||||||||| |||| ||||||||||    
T  46194280 caattcaatatattctactttgcatttatgataaagagaa-tgcaccaacagttgataagggcactcaaacccatttttctctctctttaacttatacac 46194182  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||| ||  || || ||||||||| ||||| ||||| ||||    
T  46194181 tttttcttaataagtgtgaaattagtcaagggctcagttaaattgggacggagggagta 46194123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 430 - 560
Target Start/End: Complemental strand, 1334861 - 1334732
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||||||||| ||||  ||||||||||| |||||| ||    
T  1334861 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaggcattcaaaattatttttctctctctttcattt 1334762  T
Q  530 atacactttttcttaataagtgtgaaatgag 560  Q
    |||| | ||||||||||  ||||||||||||    
T  1334761 atacgc-ttttcttaatctgtgtgaaatgag 1334732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 429 - 594
Target Start/End: Complemental strand, 38600887 - 38600723
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||| ||||| ||||| ||||||  ||||||| ||||||| ||| |||||||| |||||||||| | | |||| ||||||||||||  ||||| |    
T  38600887 tcactcccagttcaatatattatactttacatttatggtaaagaagaatgcaccaatacttgataaagggactcaaaatcatttttctctctttttcatt 38600788  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||| ||||||||||  ||| |||||||| ||| ||| || ||||| ||||| ||||| ||||    
T  38600787 tatacac-ttttcttaatctgtgcgaaatgagaaaatggtccaattaaactgggatggagggagta 38600723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 566
Target Start/End: Complemental strand, 44219112 - 44218979
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| ||||||||||||||||||||| ||| |   ||| |||||| | ||    ||| || | ||||||||||||||||  |||| |||||    
T  44219112 acttccaattcaatatattctactttgtatttatgataatggggaatgcaccaacacttac--aagacactcaaaaccatttttctctttctttgactta 44219015  T
Q  531 tacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||||||||||||||| ||||||||||| ||||||    
T  44219014 tacactttttcttaatatgtgtgaaatgaacaaaag 44218979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 36790872 - 36790750
Alignment:
Q  459 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| ||||||| ||||||||||||||||||||  ||  | |||  |||||||||||| |||||||||||||| ||||| ||||||| ||| |||||    
T  36790872 atttatgataaagaagaatacaccaatagttgataagtgcgctcaaactcatttttctctctctttcacttatacaattttttttaataaatgtaaaatg 36790773  T
Q  559 agcaaaaggttcagttaaaatggg 582  Q
    ||   |||| ||||||||||||||    
T  36790772 ag-tcaaggctcagttaaaatggg 36790750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 430 - 556
Target Start/End: Original strand, 48409611 - 48409738
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaacca--tttttctctccctttcac 527  Q
    |||| ||||||||||||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| || | ||||| |  ||| |||||| ||||||     
T  48409611 cactcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaatctttctctctctctttcat 48409710  T
Q  528 ttatacactttttcttaataagtgtgaaa 556  Q
    ||||||| |||||||||||| ||||||||    
T  48409711 ttataca-tttttcttaatatgtgtgaaa 48409738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 437 - 594
Target Start/End: Original strand, 51164986 - 51165142
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||||||| || | ||||  ||||||||||| |||| | ||||||||     
T  51164986 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaaattatttttctctctcttttatttatacac- 51165084  T
Q  537 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||  ||||||||| || ||| || ||| ||||| | ||| ||||| ||||    
T  51165085 ttttcttaatttgtgtgaaatcagaaaatggctcaattaaactcggacggagggagta 51165142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 30261509 - 30261420
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||| ||||||||||| ||||||||||  |||| |||||||||| | ||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  30261509 aaaactatttttctctctctttcactta--cactctttcttaatatgcgtgaaatgaacaaaaggctcagttaaaatgggacggagggagta 30261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 41287295 - 41287402
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||  | | ||||||||||||||||| ||||||||||||||     
T  41287295 caattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaaagatagtcaaaaccatttttctctctctttcacttatacat 41287394  T
Q  536 tttttctt 543  Q
     |||||||    
T  41287395 gttttctt 41287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 467 - 594
Target Start/End: Complemental strand, 26479918 - 26479785
Alignment:
Q  467 taaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcac------ttatacactttttcttaataagtgtgaaatgag 560  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||| | |||||| ||  |||      ||||| ||||||||||||||||||||||||||     
T  26479918 taaagaagaatgcaccaatagttgataaatgcattcaaaaccatctctctctctctcacacacacacttatatactttttcttaataagtgtgaaatgaa 26479819  T
Q  561 caaaaggttcagttaaaatgggagggaggaagta 594  Q
    | || || |||||||||||| |  ||||||||||    
T  26479818 ccaagggctcagttaaaatgaggcggaggaagta 26479785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 9218244 - 9218297
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaa 556  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  9218244 aaaactatttttctctctctttcacttatacactttttcttaatatgtgtgaaa 9218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 556
Target Start/End: Complemental strand, 21296582 - 21296458
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||| |||||||| || | ||  |||||||||| |||||| ||||| | |||| |||    
T  21296582 acttccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcattttcctctctccttcattta 21296483  T
Q  531 tacactttttcttaataagtgtgaaa 556  Q
    |||| ||| ||||| || ||||||||    
T  21296482 taca-tttgtcttagtatgtgtgaaa 21296458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 429 - 561
Target Start/End: Original strand, 9017827 - 9017958
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||||||||||||| |||||  |||||| ||||||  ||  | | ||| |||||||| || | ||| ||| ||||||| ||||||||||| |||||| |    
T  9017827 tcacttccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatt 9017926  T
Q  529 tatacactttttcttaataagtgtgaaatgagc 561  Q
    |||||| ||||| |||||| |||||||||||||    
T  9017927 tataca-ttttttttaatatgtgtgaaatgagc 9017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 502 - 594
Target Start/End: Complemental strand, 17777002 - 17776911
Alignment:
Q  502 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||| |||||||||||||||| |  ||||||||  ||||| ||||||||||    
T  17777002 taaaaccatttttctctctcattcatttatacatttttt-ttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 17776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 502 - 594
Target Start/End: Complemental strand, 19078303 - 19078212
Alignment:
Q  502 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||| |||||||||||||||| |  ||||||||  ||||| ||||||||||    
T  19078303 taaaaccatttttctctctcattcatttatacatttttt-ttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 19078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 436 - 556
Target Start/End: Complemental strand, 39329824 - 39329705
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| |||  || ||| |||||||| || | || | |||| ||||| |||| ||| || ||||||||||||||     
T  39329824 caattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa-gacattcaaaactatttatctttctctttcacttatacat 39329726  T
Q  536 tttttcttaataagtgtgaaa 556  Q
    |||||||||||| ||||||||    
T  39329725 tttttcttaatatgtgtgaaa 39329705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 2868672 - 2868734
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||||||||| | |||| ||||||| |||||||||||| ||||||||||||||||    
T  2868672 ttaaaaccatttttctctctccttcatttataca-tttttcttaatatgtgtgaaatgagcaaa 2868734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 539
Target Start/End: Complemental strand, 54021531 - 54021429
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||  ||||||  ||||||| ||| || ||||| ||||||||| || | |||| |||||||||||| |||| | |||||||||    
T  54021531 aattcaatatattctactttacatttataataaagaagaatgcaacaatatttgataaagacactcaaaatcatttttctctctcttttatttatacact 54021432  T
Q  537 ttt 539  Q
    |||    
T  54021431 ttt 54021429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 559
Target Start/End: Complemental strand, 54122303 - 54122176
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| |||||  |||||| ||||||| ||  | | ||| |||||||| || | |||  |||||||||| ||||||||||| | |||| |||    
T  54122303 acttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcattta 54122204  T
Q  531 tacactttttcttaataagtgtgaaatga 559  Q
    |||| ||| |||||||| |||||||||||    
T  54122203 taca-tttgtcttaatatgtgtgaaatga 54122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 588
Target Start/End: Original strand, 39144770 - 39144845
Alignment:
Q  514 tctctccctttcacttatacactttt-tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||| ||||||| ||| ||| ||||||| ||||    
T  39144770 tctctctctttcacttatacatttttttcttaatatgtgtgaaatgaacaaaaggctcacttataatgggatggag 39144845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 558
Target Start/End: Original strand, 53051058 - 53051180
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||| ||||||  ||||||| |||| || ||| ||| |||| |||| ||||||| | ||||| ||||||||||| ||||   |||||||    
T  53051058 ccaattcaatatattatactttacatttatgataaacaagaatgcacaaatacttgaaaaaggcactcaaaactatttttctctctctttactttataca 53051157  T
Q  535 ctttttcttaataagtgtgaaatg 558  Q
    | ||||||||||  ||||||||||    
T  53051158 c-ttttcttaatctgtgtgaaatg 53051180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 540
Target Start/End: Complemental strand, 53754137 - 53754034
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||   |||| || | |||| ||||||||||||  ||||| |||||||||    
T  53754137 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaatcatttttctctctatttcatttatacact 53754038  T
Q  537 tttt 540  Q
    ||||    
T  53754037 tttt 53754034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 5245445 - 5245602
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||||||||||| ||  | | |||||||||||| || | ||  ||| ||||||| ||||||||||| | ||||  ||||||     
T  5245445 caattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctctccttcatgtataca- 5245543  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||| |||||||| || |||  |||||||| || ||||||||  ||||| ||||| ||||    
T  5245544 tttgtcttaatatgtatgatttgagcaaatggctcagttaatctgggacggagggagta 5245602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 36315729 - 36315651
Alignment:
Q  516 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||| |||| |||||||||||||||||||||| ||||| ||||||||||| | | ||||| ||| ||| ||||| ||||    
T  36315729 tctctcttttacttatacactttttcttaatatgtgtggaatgagcaaaaagcttagttataataggacggagggagta 36315651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 540
Target Start/End: Complemental strand, 38524352 - 38524263
Alignment:
Q  450 ctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt 540  Q
    |||||||||||||||| | | |||||||||| ||||| ||||||||  |||| ||||| |||||||| |  |||||||||||||| |||||    
T  38524352 ctactttgtatttatgatgatgaaaaatacatcaatacttgataaa-acattcaaaactatttttctttttctttcacttatacatttttt 38524263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 577
Target Start/End: Complemental strand, 32977864 - 32977724
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||  ||  ||||||| ||||||||||| || ||||| |||| ||| ||| | ||||| ||||||||| | ||||   ||||||||    
T  32977864 caattcaatatattctaaattacatttatgataaagaaaaatgcatcaatacttgaaaaatgcactcaaaactatttttctccctctttactttatacac 32977765  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
     ||||||||||  |||||||||||  ||| || |||||||||    
T  32977764 -ttttcttaatccgtgtgaaatgaaaaaatggctcagttaaa 32977724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 38215818 - 38215761
Alignment:
Q  537 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||| |||||||||||||||||||||| |||| ||||| || || ||||||||||    
T  38215818 ttttctttataagtgtgaaatgagcaaaagattcatttaaattgagacggaggaagta 38215761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 21585490 - 21585327
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||| ||| |||||||| |||  ||||||| ||||||| |||  ||||||| || | |||| || | |||| |||||||||||  | ||||||     
T  21585490 cacttccaatacaatatattctattttacatttatgataaagaagaatgaaccaataattaacaaagacactcaaaatcatttttctctgtccttcacta 21585391  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||| | ||||||| ||||| |||| |||||| |||  | ||| ||||| ||||||||||| ||||    
T  21585390 atata-tttttctcaataaatgtggaatgagtaaattgctcaattaaattgggagggagggagta 21585327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 556
Target Start/End: Complemental strand, 42547187 - 42547061
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||||  |||| ||||||| |||  || ||| |||||||| || | || | |||| ||||| |||||| |||| |||| |||    
T  42547187 tcactcccaattcaatatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaa-gacattcaaaactatttttttctctcttttact 42547089  T
Q  529 tatacactttttcttaataagtgtgaaa 556  Q
    |||| | |||||||||||| ||||||||    
T  42547088 tataaattttttcttaatatgtgtgaaa 42547061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Complemental strand, 51636905 - 51636843
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||||||||| | |||||||| ||| ||||||||||||| | |||||||| ||||    
T  51636905 ttaaaaccatttttctctctccttcacttaaaca-tttttcttaataattatgaaatgaacaaa 51636843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 539 - 577
Target Start/End: Original strand, 26832197 - 26832235
Alignment:
Q  539 ttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  26832197 ttcttaataagtgtgaattgagcaaaaggctcagttaaa 26832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 526 - 588
Target Start/End: Complemental strand, 34081079 - 34081017
Alignment:
Q  526 acttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
    |||||||||||||||||||||| |||| |||| | |||||| ||  |||||||||||| ||||    
T  34081079 acttatacactttttcttaatatgtgtaaaataaacaaaagtttgggttaaaatgggatggag 34081017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 560
Target Start/End: Complemental strand, 39866588 - 39866504
Alignment:
Q  475 aatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 560  Q
    |||||||||||| || | |||  || ||||||| ||||||||||  | |||| ||||||| |||||||||||| ||||||||||||    
T  39866588 aatacaccaatacttaacaaaatcacttaaaactatttttctctttccttcatttataca-tttttcttaatatgtgtgaaatgag 39866504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 556
Target Start/End: Complemental strand, 43639595 - 43639471
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| |||||  |||||| ||||||| ||  | ||||| || ||||| || | ||  ||| ||||||||||||||||||| | |||| |||    
T  43639595 acttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcattta 43639496  T
Q  531 tacactttttcttaataagtgtgaaa 556  Q
    || | ||| |||||||| ||||||||    
T  43639495 tata-tttgtcttaatatgtgtgaaa 43639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 566
Target Start/End: Original strand, 47684858 - 47684903
Alignment:
Q  521 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||||||| ||||| ||||||||||| ||||||||||| ||||||    
T  47684858 ctttcacttgtacaccttttcttaatatgtgtgaaatgaacaaaag 47684903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 632 - 831
Target Start/End: Original strand, 29051806 - 29052005
Alignment:
Q  632 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 731  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29051806 ttgaaaggacacccaaaatctaaagcactttcatgatttcatcaatctggtccttagagaaattaacataacaatgatcagaaacaaagtgactactaat 29051905  T
Q  732 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttcacaatcacaaggaaa 831  Q
    ||||||||||| |||||| | | ||||||||   ||||||||| |||  ||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  29051906 tatgaattttcaaattacatatagaaaacttcacaaatttgagcatttctaacattgagaaaccaaatagtaacacactgacttcacaatcacaaagaaa 29052005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 430 - 596
Target Start/End: Complemental strand, 29756223 - 29756057
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  29756223 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactt 29756124  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 596  Q
    |||||||||||||||||||||||||||||||| || || || |||||||||||| ||||| ||||||    
T  29756123 atacactttttcttaataagtgtgaaatgagccaagggctccgttaaaatgggacggagggagtact 29756057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 429 - 594
Target Start/End: Original strand, 26583754 - 26583919
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||| | |||  |||||||||||| ||||||||    
T  26583754 tcactcccaattcaatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatttttctctctctttcact 26583853  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||| ||||    
T  26583854 tatacactttttcttaataagtgtgaaatgagtcaagggttcagttaaaatgggacggagggagta 26583919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 430 - 559
Target Start/End: Complemental strand, 37541194 - 37541065
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||||||||||  ||||||  ||||||| ||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  37541194 cacttccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttttctctctctttcactt 37541095  T
Q  530 atacactttttcttaataagtgtgaaatga 559  Q
    ||||||||||||||||||||||||||||||    
T  37541094 atacactttttcttaataagtgtgaaatga 37541065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 24131481 - 24131318
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||||| ||| |||| ||||||||||| |||||| ||||||||||||||||  |||||||||    
T  24131481 cactcccaattcaatatattatactttgcatttatgataaagaagaatgcacctatagttgataagggcattcaaaaccatttttctct--ctttcactt 24131384  T
Q  530 atacactttttcttaataagtgtgaaatgag-caaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||| |||||||||||||||||||||||||| |||| |  ||||||||||||||| ||||| ||||    
T  24131383 atacgctttttcttaataagtgtgaaatgagtcaaatgactcagttaaaatgggacggagggagta 24131318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 26924195 - 26924037
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | |||  |||||||||||| ||||||||| |||||    
T  26924195 caattcaatatattatactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaactcatttttctctctctttcacttttacac 26924096  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||||||| ||  | |||||||||| |||| ||||| ||||    
T  26924095 tttttcttaataagtgtgaaatgagccaagagctcagttaaaacgggacggagggagta 26924037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 29051305 - 29051385
Alignment:
Q  282 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtact 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29051305 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattctact 29051385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 451 - 594
Target Start/End: Complemental strand, 3160747 - 3160604
Alignment:
Q  451 tactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagt 550  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||| || |||| | ||| |||||||||| || ||||||||||||||||||||||||||||||    
T  3160747 tactttgcatttatgataaagaataatgcaccaatagttgacaagggcactcaaacccatttttctttctctttcacttatacactttttcttaataagt 3160648  T
Q  551 gtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||  || || ||||||||||||||| ||||| ||||    
T  3160647 gtgaaatgagtcaagggctcagttaaaatgggacggagggagta 3160604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 29051074 - 29051174
Alignment:
Q  177 aaaagtcaaaataaataaaagtatgaatttgaactaagaactggttacatctacagcaatcagtcaatggctaaagtttcttcatgtgaaactaaaataa 276  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  29051074 aaaagccaagataaataaaagtatgaatttgaactaagaagtggttacttctatagcaatcagtcaatggctaaagttttttcatatgaaactaaaataa 29051173  T
Q  277 t 277  Q
    |    
T  29051174 t 29051174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 436 - 589
Target Start/End: Complemental strand, 46363486 - 46363332
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaag-gcatttaaaaccatttttctctccctttcacttataca 534  Q
    |||||||| ||||| ||||||| ||||||| ||||||| ||| |||||||||||||||||| ||| | |||  ||||| |||||| || |||||||||||    
T  46363486 caattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataaagtgcactcaaacacatttctctctctctctcacttataca 46363387  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 589  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||| ||| |||||    
T  46363386 ctttttcttaataagtgtgaaatgagtgaaaggctcaattaaaattggacggagg 46363332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 595
Target Start/End: Original strand, 50926789 - 50926939
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||| ||||| ||||||||||||||||| ||||  |||||||| |||||||||    
T  50926789 atattctactttacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccatttttctctctctttttcttatacaatttttctta 50926888  T
Q  545 ataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtac 595  Q
    |||  ||||||||||| |||| | |||||||||||| || ||||| |||||    
T  50926889 atatatgtgaaatgagaaaaaagctcagttaaaatgagacggagggagtac 50926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 436 - 560
Target Start/End: Original strand, 5503453 - 5503575
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||| ||| ||| ||||||| ||| |||||||||||||||| || |  |||||||||||||||||||  |||| ||||||||    
T  5503453 caattcaatatattatactttgaattaatgataaagaagaatgcaccaatagttgataagggtacctaaaaccatttttctctcc--ttcatttatacac 5503550  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||||||||||||||||    
T  5503551 tttttcttaataagtgtgaaatgag 5503575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 29225489 - 29225322
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||||||||||  ||||||| |||| || ||| |||||||| || | ||||||| | |||| |||||||||| | |||||||||    
T  29225489 cacttccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctcactctttcactt 29225390  T
Q  530 a---tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |   ||||||||||||||||| ||||||||||||||||||  ||| ||| ||||||| ||||| ||||    
T  29225389 atactacactttttcttaatatgtgtgaaatgagcaaaagactcaattataatgggacggagggagta 29225322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 37925321 - 37925192
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttc----tctccctttcacttat 531  Q
    |||||||| ||||||||||||| ||||||| ||||||||||| |||||||| |||||||  ||| | |||| ||||||||    |||| |||||||||||    
T  37925321 caattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattgataagagcactaaaaatcatttttctctctctctctttcacttat 37925222  T
Q  532 acactttttcttaataagtgtgaaatgagc 561  Q
    ||||||||||||||||||||| ||||||||    
T  37925221 acactttttcttaataagtgttaaatgagc 37925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 436 - 589
Target Start/End: Complemental strand, 40754488 - 40754336
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatag-ttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||| || ||||||||||||| ||||||| ||||||| ||| ||||||||| ||||||| |||| | |||||||||| ||||||  |||||||||||||    
T  40754488 caatttaatatattctactttgcatttatgataaagaagaatgcaccaataggttgataagggcactcaaaaccatttctctctc--tttcacttataca 40754391  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 589  Q
    |||||||||||||||| |||||||||  ||  | ||||||||| ||||| |||||    
T  40754390 ctttttcttaataagtatgaaatgagtcaagagctcagttaaattgggacggagg 40754336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 16956585 - 16956701
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    |||||||||||| |||||||| |||| || ||| ||| |||| || |||||| || | ||| |||||||||||| |||||||||||||||||||||||||    
T  16956585 atattctactttatatttatgataaataagaatgcacaaatacttaataaagacactcaaacccatttttctcttcctttcacttatacactttttctta 16956684  T
Q  545 ataagtgtgaaatgagc 561  Q
    ||| |||| ||||||||    
T  16956685 atatgtgtcaaatgagc 16956701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 34813950 - 34814107
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||| || |||| ||| |||| || | ||   || ||||||| ||||||||||| | |||||| |||||     
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaataca- 34814048  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||||||||||  |||| ||||| ||||| ||||| ||||    
T  34814049 tttttcttaataagtgtgaaatgagcaaaaaattcacttaaattgggacggagggagta 34814107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 27932908 - 27932746
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||||||||||||| || | || | |||  |||||||||||| |||||||||||| ||    
T  27932908 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaaggacactcaaacgcatttttctctctctttcacttatatac 27932809  T
Q  536 tttttctta----ataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||| ||||    |||| |||||||||||| || |  | ||||||||||||| ||||| ||||    
T  27932808 ttttacttaatatataaatgtgaaatgagccaatgacttagttaaaatgggacggagggagta 27932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 4466235 - 4466072
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | ||||| | | ||| ||||||||||||| | ||||||     
T  4466235 cacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttttctctctcattcacta 4466136  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||| | |||||||||||||||||||||||| |||| || ||| ||||| ||||| ||||| ||||    
T  4466135 atata-tttttcttaataagtgtgaaatgaacaaatggctcaattaaattgggacggagggagta 4466072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 26760381 - 26760461
Alignment:
Q  508 catttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||| || |||||||||||| ||||    
T  26760381 catttttctctctctttcacttatacattttttcttaataagtgtgaaatgagtcaaaggctcggttaaaatgggacggag 26760461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 430 - 564
Target Start/End: Original strand, 16040104 - 16040237
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || ||||||||||||||||||| | || |||     
T  16040104 cacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctctccttgacta 16040203  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||| | ||||||||||||| |||||||||||||||    
T  16040204 atata-tttttcttaataaatgtgaaatgagcaaa 16040237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 436 - 533
Target Start/End: Original strand, 31798451 - 31798546
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 533  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | |||||||| |||||||  |||||||||||||    
T  31798451 caattcaatatattctactttgcatttatgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctct--ctttcacttatac 31798546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 583
Target Start/End: Complemental strand, 3718924 - 3718779
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||  ||||||| ||| || |||| ||| |||| |||| ||  ||| ||||||| ||||||||||| ||| || | |||||     
T  3718924 caattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctctctt-cattaataca- 3718827  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  3718826 tttttcttaataagtgtgaaatgagcaaaatgttcacttaaattggga 3718779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 431 - 594
Target Start/End: Complemental strand, 11425949 - 11425787
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || | ||||| ||||||||||| | |||||| |    
T  11425949 acttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttttctctctccttcactaa 11425850  T
Q  531 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    || | |||||||||||||  |||||||||||||| || ||| ||||| ||||| ||||| ||||    
T  11425849 tata-tttttcttaataaacgtgaaatgagcaaatggctcaattaaattgggacggagggagta 11425787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 460 - 589
Target Start/End: Original strand, 14090697 - 14090822
Alignment:
Q  460 tttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    |||||| |||| || ||| |||||||||||||||||| || | ||  | |||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  14090697 tttatgataaacaagaatgcaccaatagttgataaagacaatcaa--ctatttttctctc--tttcacttatacattttgtcttaataagtgtgaaatga 14090792  T
Q  560 gcaaaaggttcagttaaaatgggagggagg 589  Q
    || |   ||||||||||||||||| |||||    
T  14090793 gcgaggagttcagttaaaatgggatggagg 14090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 433 - 539
Target Start/End: Complemental strand, 36232867 - 36232761
Alignment:
Q  433 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 532  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||| |||||||| |||  |||| || | |||| |||||||||||| |||||  |||||    
T  36232867 ttccaattcaatatattctactttatatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcgtttata 36232768  T
Q  533 cactttt 539  Q
    |||||||    
T  36232767 cactttt 36232761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 2886323 - 2886403
Alignment:
Q  514 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||| || || ||| ||||||||||| | ||||||||    
T  2886323 tctctctctctcacttatacactttttcttaataagtatgaaatgagccaagggctcaattaaaatgggacgaaggaagta 2886403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 560
Target Start/End: Complemental strand, 10587656 - 10587533
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||||| |||| ||||||| ||| ||| |||  | || || ||||||| | || ||||||  ||||||||||  ||||||||||| |||    
T  10587656 caattcaatatattctattttgcatttatgataatgaagaatgtatca-taattgataatgacacttaaaattatttttctctttctttcacttatgcac 10587558  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||||||||||||||||    
T  10587557 tttttcttaataagtgtgaaatgag 10587533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 437 - 580
Target Start/End: Complemental strand, 25983702 - 25983565
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    |||||||||||||||| |||| ||||||| |||| |  ||| |||||||| || |||| | || ||||||| ||||| ||||    ||||||||||||||    
T  25983702 aattcaacatattctattttgcatttatgataaaaatgaatgcaccaatacttaataa-gacacttaaaacaattttactct----ttcacttatacact 25983608  T
Q  537 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 580  Q
    ||||||||||| ||||| ||||| ||||||  ||||||||||||    
T  25983607 ttttcttaatatgtgtg-aatgaacaaaagactcagttaaaatg 25983565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 558
Target Start/End: Complemental strand, 27210042 - 27209921
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||| ||||  ||||||| ||||||| ||| |||||||| |||  |||| || | |||| |||||||||||| |||||| ||||||||    
T  27210042 caattcaatatattctcctttacatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcatttatacac 27209943  T
Q  536 tttttcttaataagtgtgaaatg 558  Q
     ||||||||||| |||| |||||    
T  27209942 -ttttcttaatatgtgtaaaatg 27209921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 557
Target Start/End: Complemental strand, 705424 - 705303
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||  || |||| ||||||| ||| ||| |||| || |||||| |||| |||| ||||||||| || |||| |||||||||     
T  705424 caattcaatatattatactttacatctatgataaagaagaatgcactaatacttaataaagacattcaaaatcatttttctttctctttaacttatacat 705325  T
Q  536 tttttcttaataagtgtgaaat 557  Q
    |||||||||||| || ||||||    
T  705324 tttttcttaatatgtatgaaat 705303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 459 - 595
Target Start/End: Complemental strand, 36326257 - 36326122
Alignment:
Q  459 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| |||| || ||| |||||||| |||| |||| || | ||||||||| ||||||| |||||| |||||||| ||||||||||  ||||||||||    
T  36326257 atttatgataaacaagaatgcaccaatatttgacaaagacactcaaaaccattgttctctctctttcatttatacac-ttttcttaatctgtgtgaaatg 36326159  T
Q  559 agcaaaaggttcagttaaaatgggagggaggaagtac 595  Q
      |||  || ||||||||| ||||| ||||| |||||    
T  36326158 ttcaactggctcagttaaactgggatggagggagtac 36326122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 431 - 594
Target Start/End: Complemental strand, 2219528 - 2219366
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||  || |||||| || | |||| |||| ||||||| |||||| |||    
T  2219528 acttccaattcaatatattttactttacatttatgataaagaagaatgcatcaatcttttataaagacactcaaaatcattattctctctctttcattta 2219429  T
Q  531 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||  ||| |||||| ||||||||||||  ||| |||||| ||||  ||||| ||||| ||||    
T  2219428 taca-atttacttaatcagtgtgaaatgaaaaaatggttcaattaatctgggacggagggagta 2219366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 559
Target Start/End: Complemental strand, 13409849 - 13409730
Alignment:
Q  440 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 539  Q
    |||| ||||||||| |  |||||||| ||||||||||| || ||||| || |||||  |   |||||| |||||||||| ||||||||||||| | ||||    
T  13409849 tcaatatattctacctcatatttatgataaagaaaaatgcatcaatacttaataaatactagtaaaactatttttctcttcctttcacttatatattttt 13409750  T
Q  540 tcttaataagtgtgaaatga 559  Q
    ||||||||  ||||||||||    
T  13409749 tcttaatatatgtgaaatga 13409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 558
Target Start/End: Complemental strand, 28706675 - 28706577
Alignment:
Q  459 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| ||||||||||| || ||||| |||| ||||||| | |||||||||||||||||   |||| ||||||| ||||| |||||| ||||||||||    
T  28706675 atttatgataaagaaaaatgcatcaatacttgacaaaggcactcaaaaccatttttctctcttattcatttataca-ttttttttaatatgtgtgaaatg 28706577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 576
Target Start/End: Original strand, 32348244 - 32348390
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| |||||| |||| || ||  | |||||| ||||||| || | ||  ||| ||||||||||||||||||| | |||| |    
T  32348244 tcactcccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctccttcatt 32348343  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||| ||| |||||||| ||||||  |||||||| || ||||||||    
T  32348344 tataca-tttgtcttaatatgtgtgatttgagcaaatggctcagttaa 32348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 539
Target Start/End: Original strand, 14352593 - 14352705
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaacca---tttttctctccctttca 526  Q
    |||| ||||||||| |||||||||||| |||||| | ||||||| ||| |||||||| |||| |||| || | |||||||   ||||||||||  |||||    
T  14352593 cactcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttgacaaagacactcaaaaccattttttttctctctatttca 14352692  T
Q  527 cttatacactttt 539  Q
     ||||||||||||    
T  14352693 tttatacactttt 14352705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 4659529 - 4659585
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| ||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  4659529 ttaaaactatttttctctccccttcactaataca-tttttcttaataagtgtgaaatg 4659585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 435 - 539
Target Start/End: Original strand, 37495861 - 37495963
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||  ||||||| ||| |||||||| ||||||||| |||| |||| ||  ||||||||  ||||| |||||||    
T  37495861 ccaattcaatatattctactttacatttataataaagaagaatgcaccaatacttgataaagacattcaaaatca--tttctctctttttcatttataca 37495958  T
Q  535 ctttt 539  Q
    |||||    
T  37495959 ctttt 37495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 564
Target Start/End: Original strand, 27391380 - 27391507
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||| |||    ||||  ||||||| || ||||  ||| |||||| |||||||||||| | ||||||||||||     
T  27391380 caattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttataca- 27391478  T
Q  536 tttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| ||||||||||||| ||| ||||    
T  27391479 tttttcgtaataagtgtgaattgaacaaa 27391507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 566
Target Start/End: Original strand, 34332217 - 34332272
Alignment:
Q  510 tttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||    
T  34332217 tttttctctctctttcacttataca-tttttcttaatatgtgtgaaatgaacaaaag 34332272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 556
Target Start/End: Original strand, 40061842 - 40061961
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||||| |||| ||||||| ||| |||||||  | ||||| |||||||   ||||||||| ||||||||||||   ||| ||||||||     
T  40061842 caattcaatatattctaatttgcatttatgataatgaaaaatgtaacaatacttgataagaacatttaaaatcatttttctctcttcttcgcttataca- 40061940  T
Q  536 tttttcttaataagtgtgaaa 556  Q
    ||| | |||||||||||||||    
T  40061941 tttcttttaataagtgtgaaa 40061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 40988450 - 40988506
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    |||||||||| |||||| |||||||||||||  |||||||||||| |||||||||||    
T  40988450 aaaaccatttgtctctctctttcacttatactatttttcttaatatgtgtgaaatga 40988506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 561
Target Start/End: Complemental strand, 49494173 - 49494114
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||| |||||||||||||    
T  49494173 ttaaaactatttttctctctctttcatttataca-tttttcttaatacgtgtgaaatgagc 49494114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 452 - 564
Target Start/End: Original strand, 49944981 - 49945092
Alignment:
Q  452 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtg 551  Q
    |||||| ||||||| || |||| ||| ||| |||| || | ||  ||| |||||||||||||||||||   |||| ||||||| |||||||||||| |||    
T  49944981 actttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttataca-tttttcttaatatgtg 49945079  T
Q  552 tgaaatgagcaaa 564  Q
    |||||||||||||    
T  49945080 tgaaatgagcaaa 49945092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 559
Target Start/End: Complemental strand, 50267514 - 50267391
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| |||||  |||||  ||||||| ||| | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| |||||| |||||||    
T  50267514 ccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctcactttcatttataca 50267415  T
Q  535 ctttttcttaataagtgtgaaatga 559  Q
     |||||||||||| |||||||||||    
T  50267414 -tttttcttaatacgtgtgaaatga 50267391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 539
Target Start/End: Original strand, 51049540 - 51049643
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||| ||||||  ||||||| |||| || ||| ||| || | ||||||||| |||| ||||||||||||||||| |||| | |||||||    
T  51049540 ccaattcaatatattatactttacatttatgataaaaaagaatgcactaa-acttgataaagacattcaaaaccatttttctctctcttttatttataca 51049638  T
Q  535 ctttt 539  Q
    |||||    
T  51049639 ctttt 51049643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 503 - 566
Target Start/End: Original strand, 7224500 - 7224563
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||||||||||| ||  |||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  7224500 aaaaccatttttcgctttctttcacttatacatttttttttaatatgtgtgaaatgaacaaaag 7224563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 593 - 632
Target Start/End: Original strand, 29051382 - 29051421
Alignment:
Q  593 tacttttttgggcaattaaacgttttaggacttgaatatt 632  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  29051382 tacttttttgggcacttaaacgttttaggacttgaatatt 29051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 429 - 594
Target Start/End: Original strand, 29225779 - 29225942
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttt-tctctccctttcac 527  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||  |  ||| |||||||| |||| || | || | ||| | ||||| |||||| |||||||    
T  29225779 tcactcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgacaa-gacactcaaacctattttctctctctctttcac 29225877  T
Q  528 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    || ||||||||||||||||  |||| |||| | ||||| | |||||||| |||||| ||||| ||||    
T  29225878 ttgtacactttttcttaat--gtgtaaaattaacaaaatgctcagttaacatgggacggagggagta 29225942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 436 - 519
Target Start/End: Original strand, 33149306 - 33149389
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc 519  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||| | || | ||| |||||||||||||    
T  33149306 caattcaatatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactcaaatccatttttctctc 33149389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 44580558 - 44580676
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt--ct 542  Q
    ||||||||||||| ||||||| |||| |||||| ||| |||||||||||| | || |  || ||||||||||||  ||||||||||||| || |||  ||    
T  44580558 atattctactttgcatttatgataaaaaaaaatgcacaaatagttgataaggtcactctaacccatttttctct--ctttcacttatactctctttcact 44580655  T
Q  543 ta--ataagtgtgaaatgagc 561  Q
    ||  |||||||||||||||||    
T  44580656 taatataagtgtgaaatgagc 44580676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 547
Target Start/End: Complemental strand, 45889322 - 45889212
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc-cctttcacttatacac 535  Q
    ||||||| |||||| |||||| ||||||| ||| | | |||| |||||||||| | ||  ||| ||||||||||||||||||| ||||||| |||||||     
T  45889322 aattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccatttttctctctcctttcatttataca- 45889224  T
Q  536 tttttcttaata 547  Q
    ||| ||||||||    
T  45889223 tttgtcttaata 45889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 458 - 559
Target Start/End: Complemental strand, 50773399 - 50773301
Alignment:
Q  458 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaat 557  Q
    |||||||| || | || ||||||| ||||||||||||  ||| | ||| |||   ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  50773399 tatttatgatagaaaagaatacactaatagttgataagagcactcaaaccca---ttctctctctttcacttatacacgttttcttaataagtgcgaaat 50773303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 2886204 - 2886262
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa 494  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| | ||||||||||||||    
T  2886204 caattcaatatattctactttgcatttatgataaagaagaatgctccaatagttgataa 2886262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 559
Target Start/End: Complemental strand, 21304880 - 21304760
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||| |||||| |||||||| ||||||||||| || ||||| |||| |||| || | |||| || |||| |||| |||||| ||||||| |    
T  21304880 aattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaa-caattttatctctctttcatttataca-t 21304783  T
Q  537 ttttcttaataagtgtgaaatga 559  Q
    ||||||||||   ||||||||||    
T  21304782 ttttcttaatttatgtgaaatga 21304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 539
Target Start/End: Original strand, 9590554 - 9590650
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccat--ttttctctccctttcacttatacactttt 539  Q
    |||||||||||| |||||||| |||| || ||| ||| |||| |||| ||||||| ||||||||||  || |||||| |||||| ||||||| ||||    
T  9590554 atattctactttatatttatgataaataataatgcacaaatacttgacaaaggcacttaaaaccattattatctctctctttcatttatacaatttt 9590650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 564
Target Start/End: Original strand, 40019831 - 40019919
Alignment:
Q  475 aatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||| |||| |||| ||  ||| ||||||| ||||||||||| | |||||||||||| ||||||||||| ||||| |||||| ||||    
T  40019831 aatacacaaatacttgacaagagcacttaaaacaatttttctctctcattcacttataca-tttttcttaatcagtgtaaaatgaacaaa 40019919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 560
Target Start/End: Original strand, 32587798 - 32587921
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||  |||||| ||||||| ||| | ||||| || ||||| || | |||  || ||||||  ||||||||||| | |||| |||||||     
T  32587798 caattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcatttataca- 32587896  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||| ||||||||||||    
T  32587897 tttttcttaatatgtgtgaaatgag 32587921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 561
Target Start/End: Complemental strand, 36467205 - 36467146
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||||    
T  36467205 ttaaaactatttttctctctcattcatttataca-tttttcttaatacgtgtgaaatgagc 36467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 564
Target Start/End: Original strand, 28839365 - 28839499
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | | |||| ||||||| || | ||  ||||||||||| ||||||||||| | |||| |    
T  28839365 tcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatttaaaactatttttctctctccttcatt 28839464  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| ||| ||||||||  |||||  ||||||||    
T  28839465 tataca-tttgtcttaatatatgtgatttgagcaaa 28839499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 502 - 564
Target Start/End: Complemental strand, 5040584 - 5040523
Alignment:
Q  502 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||||||||||| | |||| ||||||| ||| ||| |||| ||||||||||||||||    
T  5040584 taaaaccatttttctctctcattcatttataca-tttgtctaaatatgtgtgaaatgagcaaa 5040523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 501 - 559
Target Start/End: Original strand, 5442438 - 5442495
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    ||||||||||||||||||| | |||| ||||||| ||| |||||||| |||||||||||    
T  5442438 ttaaaaccatttttctctctcattcatttataca-tttgtcttaataggtgtgaaatga 5442495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 498 - 560
Target Start/End: Original strand, 6787342 - 6787403
Alignment:
Q  498 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 560  Q
    |||||||||| ||||||||||| |||||  ||||| | |||||||||||| ||||||||||||    
T  6787342 catttaaaactatttttctctctctttcgtttatata-tttttcttaatacgtgtgaaatgag 6787403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 435 - 537
Target Start/End: Complemental strand, 12267707 - 12267605
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||  ||||||| |||| ||| ||| | ||||| |||||||| || ||||   |||||||    
T  12267707 ccaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgaaaaatgcactcaaaactatttttctttctcttttctttataca 12267608  T
Q  535 ctt 537  Q
    |||    
T  12267607 ctt 12267605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 564
Target Start/End: Original strand, 25418743 - 25418802
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||| |||||||||||  ||||||||||| | |||||||||||| || |||||||||||||    
T  25418743 aaaactatttttctctc--tttcacttatataatttttcttaatatgtatgaaatgagcaaa 25418802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 509 - 566
Target Start/End: Original strand, 39420692 - 39420750
Alignment:
Q  509 atttttctctccctttcacttatacac-tttttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||||||||| |||||| |||||||| |||||||||||| | ||||||||| ||||||    
T  39420692 atttttctctctctttcatttatacacttttttcttaatatgcgtgaaatgaacaaaag 39420750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 556
Target Start/End: Original strand, 2571469 - 2571514
Alignment:
Q  511 ttttctctccctttcacttatacactttttcttaataagtgtgaaa 556  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  2571469 ttttctctctctttcatttatacattttttcttaatatgtgtgaaa 2571514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 567
Target Start/End: Complemental strand, 18186187 - 18186142
Alignment:
Q  522 tttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 567  Q
    ||||||| ||||| |||||||||||| |||||||||||| ||||||    
T  18186187 tttcactcatacaatttttcttaatacgtgtgaaatgagtaaaagg 18186142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 557
Target Start/End: Original strand, 27831872 - 27831997
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| || ||| |||||| ||||||| ||| |   ||| |||||||| |||| || |||| ||||||| ||||||||||  ||||||||    
T  27831872 tcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctct--ctttcact 27831969  T
Q  529 tatacactttttcttaataagtgtgaaat 557  Q
     || ||| |||||||||||  ||||||||    
T  27831970 catgcac-ttttcttaatatttgtgaaat 27831997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 561
Target Start/End: Original strand, 37525134 - 37525195
Alignment:
Q  497 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    ||||||||||| ||||||||||||  |||| ||||||| ||||||||||||  ||||||||||||    
T  37525134 gcatttaaaactatttttctctcc--ttcatttataca-tttttcttaatacatgtgaaatgagc 37525195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 2e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 632 - 831
Target Start/End: Original strand, 1354819 - 1355017
Alignment:
Q  632 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 731  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  1354819 ttgaaaggaaaccctaaatttaaagcagtttcatgatttcatcaatctggtccttagagaaattaacataacaatgatcagaaacaaagtaattactaat 1354918  T
Q  732 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttcacaatcacaaggaaa 831  Q
    ||||||||||| |||||| |||  |||||||   ||||||||| |||  ||||||| ||||||  || ||||||||| ||||||||||||||||||||||    
T  1354919 tatgaattttcaaattacatctaaaaaacttcacaaatttgagcatt-ctaacattaagaaactaaatagtaacacattgacttcacaatcacaaggaaa 1355017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 632 - 831
Target Start/End: Complemental strand, 1344744 - 1344545
Alignment:
Q  632 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 731  Q
    |||| |||| ||||||||| |||||||||||||||  ||||  ||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  1344744 ttgaaaggaaaccctaaatttaaagcagtttcatgccttcactaatctggtccttagagaaattaacataacaatgatcagaaacaaagtgattactaat 1344645  T
Q  732 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttcacaatcacaaggaaa 831  Q
    ||||||||||| |||||| ||| ||  ||||   ||||||||  | | |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  1344644 tatgaattttcaaattacatctagaggacttcaaaaatttgattagttttaacattgagaaaccaaatagtaacacactgacttcacaatcacaaggaaa 1344545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 430 - 594
Target Start/End: Original strand, 14689987 - 14690151
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| | || | ||||||||||||||||| |||||||||    
T  14689987 cactcccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcactt 14690086  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||| ||||| ||||    
T  14690087 atacactttttcttaataagtgtgaaatgagtcaagggctcagttaaaatgggacggagggagta 14690151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 436 - 583
Target Start/End: Complemental strand, 8394329 - 8394180
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctc--tccctttcacttatac 533  Q
    |||||||| ||||| ||||||||||||||| ||||||| ||| ||||||||||||||||  |||||||||  ||||||||||  || |||  ||||||||    
T  8394329 caattcaatatattttactttgtatttatgataaagaataatgcaccaatagttgataagagcatttaaactcatttttctctttctcttatacttatac 8394230  T
Q  534 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  8394229 actttttcttaataagtgtgaaatgagttaagagttcagttaaaatggga 8394180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 33743809 - 33743967
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    ||||| || ||||||||||||||||||||| ||||||| ||| ||| ||||||||||||   || | ||| ||||||||||||| |||||| ||||||||    
T  33743809 caatttaatatattctactttgtatttatgataaagaagaatgcacaaatagttgataagtacactcaaacccatttttctctctctttcatttatacac 33743908  T
Q  536 tttttcttaataagtgtgaaatg-agcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||| ||||| | ||||| |||||||||||  |||||||||    
T  33743909 tttttcttaataagtgtgaaatgaagcaaga-gttcaattaaaatgggatcgaggaagta 33743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 14748780 - 14748620
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccct--ttcacttatac 533  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||  ||| | ||| |||| |||||||| ||  |||||||||||    
T  14748780 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataagagcactcaaacccatatttctctctctctttcacttatac 14748681  T
Q  534 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||| |||||||  || || ||||||||||||||| ||||| ||||    
T  14748680 actttttcttaataagtgtaaaatgagtcaagggctcagttaaaatgggacggagggagta 14748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 459 - 594
Target Start/End: Complemental strand, 32231437 - 32231302
Alignment:
Q  459 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| ||||||| |||||| ||||||||||||| |||| | ||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||    
T  32231437 atttatgataaagaagaatacatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatacattttttcttaataaatgtgaaatg 32231338  T
Q  559 agcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||  || || ||| ||||||||||| ||||| ||||    
T  32231337 agacaagggctcaattaaaatgggacggagggagta 32231302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 561
Target Start/End: Complemental strand, 45421011 - 45420888
Alignment:
Q  438 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 537  Q
    |||||| ||||| ||||||| ||||||| ||||||| ||| | |||| |||||| || |||| | ||| ||||||||||||| |||||||||||||||||    
T  45421011 attcaatatattttactttgcatttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctctctttcacttatacactt 45420912  T
Q  538 tttcttaataagtgtgaaatgagc 561  Q
    ||||||||||||||||||||||||    
T  45420911 tttcttaataagtgtgaaatgagc 45420888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 1494313 - 1494197
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    ||||||||||||| ||||||| ||||||| ||| || ||||| ||||||| |||| | |||| |||||||||| | ||||||| |||||| |||| ||||    
T  1494313 atattctactttgcatttatgataaagaagaatgcatcaataattgataagggcactcaaaatcatttttctcactctttcacatatacatttttcctta 1494214  T
Q  545 ataagtgtgaaatgagc 561  Q
    |||||||||||||||||    
T  1494213 ataagtgtgaaatgagc 1494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 576
Target Start/End: Complemental strand, 25174659 - 25174519
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||  ||||||| ||| ||||||||||| |||| |||| | |||| |||| || |||| |||| |||||||||     
T  25174659 caattcaatatattctactttgcatttataataaagaataatgcaccaatagttaataagggcactcaaaatcattcttttctctcttttacttatacat 25174560  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    ||||||||||||| | |||||||||  ||||| ||||||||    
T  25174559 tttttcttaataaatatgaaatgagtcaaaggctcagttaa 25174519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 1345072 - 1344916
Alignment:
Q  58 tctgaccaatgattttttcgactaggtttcaactcggattctcttaaacgatggaagggcaaaagtgaaataaattatcccaatattatctaaattgaat 157  Q
    |||||||||||||| || ||| ||| ||   ||| ||||| |||||| ||||||| ||| ||||||||| ||||  ||||| || |||||||||||||||    
T  1345072 tctgaccaatgattattccgattagattcgtactaggattttcttaatcgatggatgggaaaaagtgaattaaaagatccctatgttatctaaattgaat 1344973  T
Q  158 attacactaaaatcaaccaaaaagtcaaaataaataaaagtatgaatttgaactaagaa 216  Q
    ||| ||||||||| |||| ||||| ||| |||||||||| ||||||||| |||||||||    
T  1344972 attccactaaaataaacc-aaaagccaagataaataaaaatatgaattt-aactaagaa 1344916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 430 - 576
Target Start/End: Original strand, 5392076 - 5392221
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| |||| ||| ||| ||||||||||||||||||| | |||| ||    
T  5392076 cactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcattt 5392175  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    ||||| ||| |||||||| |||||||||||||||| || ||||||||    
T  5392176 ataca-tttgtcttaataggtgtgaaatgagcaaatggctcagttaa 5392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 886522 - 886397
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||| | ||||||||||||| ||||||| ||||||| ||| |||  ||||||||||| | || | |||  |||||  ||||| ||||||||| |||||    
T  886522 caattcgatatattctactttgcatttatgataaagaagaatgcacagatagttgataaggacaatcaaactcatttccctctctctttcacttgtacac 886423  T
Q  536 tttttcttaataagtgtgaaatgagc 561  Q
    ||||||||||||||||||||||||||    
T  886422 tttttcttaataagtgtgaaatgagc 886397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 430 - 583
Target Start/End: Complemental strand, 8566191 - 8566041
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaata--caccaatagttgataaaggcatttaaaaccatttttctctccctttcac 527  Q
    |||||||||||||| ||||||| |     ||||||| |||||||||| |  || ||||||||||||| |||| | |||  |||||||||| | |||||||    
T  8566191 cacttccaattcaatatattctgc-----atttatgataaagaaaaaaatgcatcaatagttgataagggcactcaaacacatttttctccctctttcac 8566097  T
Q  528 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||||| ||||||||||||||||||||||||  || |  |||||||||||||||    
T  8566096 ttatacacgttttcttaataagtgtgaaatgagtcaatgactcagttaaaatggga 8566041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 556
Target Start/End: Original strand, 2195494 - 2195620
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||  || ||| |||||||| || | || | || | ||||| ||||||||||| ||||||||    
T  2195494 tcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa-gacactcaaaactatttttctctctctttcact 2195592  T
Q  529 tatacactttttcttaataagtgtgaaa 556  Q
    ||||||||||||||||||| ||||||||    
T  2195593 tatacactttttcttaatatgtgtgaaa 2195620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 583
Target Start/End: Original strand, 39998196 - 39998342
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| | | |||| ||||||||| || |||||| |||||||||||| |||||| |||||| |    
T  39998196 caattcaatatattctactttacatttatgataaagaagaatgctcaaatacttgataaagacacttaaaatcatttttctctctctttcatttatactc 39998295  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
     ||||||||||| || ||||||||| ||| || ||| ||||| |||||    
T  39998296 -ttttcttaatatgtatgaaatgagaaaatggctcaattaaactggga 39998342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 564
Target Start/End: Complemental strand, 42412464 - 42412330
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||| | | ||| ||||||||  ||| ||  ||| ||||||| ||||||||||| | ||||||    
T  42412464 tcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcact 42412365  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| |||||||||||| ||||||||||||||||    
T  42412364 tataca-tttttcttaatatgtgtgaaatgagcaaa 42412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 645 - 722
Target Start/End: Original strand, 10043378 - 10043455
Alignment:
Q  645 ctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtg 722  Q
    |||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  10043378 ctaaatttaaagcagtttcattattttatcaatctggtccttagagaaattaacataacagtgatcagaaacaaagtg 10043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 437 - 558
Target Start/End: Original strand, 29638335 - 29638455
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||| ||||||  ||||||| ||||||| |||  ||||||| |||| ||||||||| ||||||||||||||||  |||||| ||||||||     
T  29638335 aattcaatatattatactttacatttatgataaagaataatgaaccaatacttgacaaaggcattcaaaaccatttttctctttctttcatttatacac- 29638433  T
Q  537 ttttcttaataagtgtgaaatg 558  Q
    ||||||||||  ||||||||||    
T  29638434 ttttcttaatctgtgtgaaatg 29638455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 431 - 539
Target Start/End: Original strand, 14117490 - 14117598
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    |||| |||||||| |||||| |||||  ||||||| ||||||| |||||||||||| |||| ||||||| | ||||| | ||||||||| |||||  |||    
T  14117490 actttcaattcaatatattcaactttacatttatgataaagaagaatacaccaatacttgaaaaaggcactcaaaactaattttctctctctttccttta 14117589  T
Q  531 tacactttt 539  Q
    |||||||||    
T  14117590 tacactttt 14117598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 29451382 - 29451540
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||| ||||||| |||  || ||||||| |||| |||| |||    || ||||| |||||||||||  ||||| |||||||     
T  29451382 caattcaatatattatactttggatttatgataagaaagaatacactaatacttgacaaaatg-ttcaaaactatttttctctc--tttcatttatacat 29451478  T
Q  536 ---tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
       |||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  29451479 cattttttcttaatatgtgtgaaatgaacaaaaggttcggttaaaatgggatggaggaagta 29451540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 558
Target Start/End: Original strand, 28791340 - 28791462
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| |||||||| |||  ||||||| ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||||||| ||||   |||||||    
T  28791340 ccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttactttataca 28791439  T
Q  535 ctttttcttaataagtgtgaaatg 558  Q
    | ||||||||||  ||||||||||    
T  28791440 c-ttttcttaatctgtgtgaaatg 28791462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 556
Target Start/End: Complemental strand, 40077823 - 40077705
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| || | |||| ||||||| |||| |||||| ||||||||     
T  40077823 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacac- 40077725  T
Q  537 ttttcttaataagtgtgaaa 556  Q
    ||||||||||| | ||||||    
T  40077724 ttttcttaatatgagtgaaa 40077705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 565
Target Start/End: Complemental strand, 27868399 - 27868271
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||| || ||||  | ||||| |||| ||   ||  ||||||||||||||||   | |||||| |||||     
T  27868399 caattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttttctccatcattcactaataca- 27868301  T
Q  536 tttttcttaataagtgtgaaatgagcaaaa 565  Q
    ||||||||||||||||||||||||||||||    
T  27868300 tttttcttaataagtgtgaaatgagcaaaa 27868271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 435 - 588
Target Start/End: Complemental strand, 27973761 - 27973609
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    |||||||||  |||||||||||| ||||||| ||| |  ||||  | ||||| |||| ||   || |||||||||||||||||   | |||||| |||||    
T  27973761 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 27973662  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
     |||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||    
T  27973661 -tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggag 27973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 435 - 588
Target Start/End: Complemental strand, 28031030 - 28030878
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    |||||||||  |||||||||||| ||||||| ||| |  ||||  | ||||| |||| ||   || |||||||||||||||||   | |||||| |||||    
T  28031030 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 28030931  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
     |||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||    
T  28030930 -tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggag 28030878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 445 - 560
Target Start/End: Complemental strand, 9734232 - 9734119
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    ||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||    | | ||| ||||||||||||  |||||| ||||||| ||||| |||    
T  9734232 atattttactttgcatttatgataaagaagaatgcaccaatagttgataagaatactcaaatccatttttctct--ctttcatttatacattttttttta 9734135  T
Q  545 ataagtgtgaaatgag 560  Q
    |||| |||||||||||    
T  9734134 ataaatgtgaaatgag 9734119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 594
Target Start/End: Original strand, 2797139 - 2797230
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||  |||||||||| ||||| | ||| ||| ||| ||| ||||| ||||    
T  2797139 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 2797230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 564
Target Start/End: Complemental strand, 7258448 - 7258314
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||| || |||| |||||||| |||| ||  ||  ||||||||||||||||||  | |||| |    
T  7258448 tcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttccttcatt 7258349  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaa 564  Q
     ||| | ||||| |||||||||||||||| ||||||    
T  7258348 aatata-ttttttttaataagtgtgaaataagcaaa 7258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 591
Target Start/End: Original strand, 8840445 - 8840514
Alignment:
Q  521 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaa 591  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||| ||| ||| ||||||| |||||||    
T  8840445 ctttcacttatacaatttttcttaatatgtgtgaaatga-caaaaggctcacttataatgggacggaggaa 8840514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 555
Target Start/End: Complemental strand, 15559203 - 15559086
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||| ||||||| ||| |  ||||||||||||| |||| ||   || |||||| ||||||| |||| | |||||| ||||| |    
T  15559203 aattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctctccttcactaataca-t 15559105  T
Q  537 ttttcttaataagtgtgaa 555  Q
    |||||||||||| ||||||    
T  15559104 ttttcttaataaatgtgaa 15559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 430 - 584
Target Start/End: Original strand, 37459377 - 37459521
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| |||||| || |||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||  |||       ||||||| ||||  ||||| ||    
T  37459377 cactcccaatttaatatattcaactttgcatttatgataaagaagaatacatcaatagttgatcaa--cat-------catttttttctctttttcattt 37459467  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggag 584  Q
    |||||||||| ||||||||||||||||||||| || |  | ||||||||||||||    
T  37459468 atacactttt-cttaataagtgtgaaatgagccaatgacttagttaaaatgggag 37459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 435 - 599
Target Start/End: Original strand, 41726553 - 41726714
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||||| | ||||| || |||||||  |||||  |||||||    
T  41726553 ccaattcaatatattctactttacatttatgataaagaagaatgcaacaatacttgaaaaaggcactcaaaactatatttctct--ctttcttttataca 41726650  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactttt 599  Q
     |||||||||||  ||||||||||   ||   ||||||||||| ||||| ||||| |||| ||||    
T  41726651 -tttttcttaatctgtgtgaaatggaaaattagttcagttaaactgggacggagggagtaatttt 41726714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 36012001 - 36011909
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag-gttcagttaaaatgggagggaggaagta 594  Q
    |||||||||| ||| || ||||||||||||||| ||||||||| |  |||||||||| ||||||  || | ||||||||||| ||||||||||    
T  36012001 aaaaccatttctctttctctttcacttatacacattttcttaacatatgtgaaatgaacaaaagacttgacttaaaatgggacggaggaagta 36011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 1354206 - 1354159
Alignment:
Q  291 cagaacaatttggttcctttttctaatgcaactttgaatggctgcaaa 338  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  1354206 cagatcaatttggttcatttttcttatgcaactttgaatggctgcaaa 1354159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 566
Target Start/End: Complemental strand, 325105 - 325028
Alignment:
Q  488 ttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||| ||||||| | |||||||||||||| ||| ||||||||||||| ||| |||||||| || |||||||| ||||||    
T  325105 ttgacaaaggcaatcaaaaccatttttctttccttttcacttataca-tttgtcttaatatgtttgaaatgaacaaaag 325028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 561
Target Start/End: Original strand, 29615830 - 29615955
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| |||||| |||||  |||||||  |  | ||| |||||||||| || | ||  ||||||||||  ||||||||||| | |||| |||||||    
T  29615830 ccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtgcatttaaaattatttttctctctccttcatttataca 29615929  T
Q  535 ctttttcttaataagtgtgaaatgagc 561  Q
     |||||||||||| |||||||||||||    
T  29615930 -tttttcttaatacgtgtgaaatgagc 29615955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 533
Target Start/End: Complemental strand, 41759705 - 41759607
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 533  Q
    ||||||||| ||||| ||||||||||||||| ||||||| ||| |||||||| |||| || | || | |||  ||||||| |||| ||||||| |||||    
T  41759705 ccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattgacaaggacactcaaactcatttttttctctctttcacatatac 41759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 594
Target Start/End: Complemental strand, 2875094 - 2875005
Alignment:
Q  505 aaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||  ||||||||||| ||| |||||||||||  |||||||||| ||||| | | | ||| ||||||| ||||| ||||    
T  2875094 aaccatttttctctttctttcacttattcaccttttcttaatagttgtgaaatgaacaaaaagcttatttataatgggacggagggagta 2875005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 553
Target Start/End: Complemental strand, 5423238 - 5423122
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| || ||| |||||||||||||| ||| |  ||||||||||||  |||| || | || | |||| |||||||||||| ||||||||||| ||     
T  5423238 caattcaatatcttccactttgtatttatgataatggtaaatacaccaatgcttgacaaggacactcaaaatcatttttctctctctttcacttatgca- 5423140  T
Q  536 tttttcttaataagtgtg 553  Q
    ||| |||||||| |||||    
T  5423139 tttatcttaatatgtgtg 5423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 445 - 557
Target Start/End: Original strand, 26677115 - 26677227
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaac-catttttctctccctttcacttatacactttttctt 543  Q
    ||||||||||||| ||||||| ||| |   ||| |||||||| || | || | || |||||||  ||||||||||| |||||||||||||| ||||||||    
T  26677115 atattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttataca-tttttctt 26677213  T
Q  544 aataagtgtgaaat 557  Q
    |||| |||||||||    
T  26677214 aatatgtgtgaaat 26677227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 560
Target Start/End: Original strand, 139055 - 139178
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||  |||||| |||||| ||||||| ||  | ||||| |||||||| || | ||  | |||||||| ||||||| |||| | |||| |||||||     
T  139055 caattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcatttataca- 139153  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||| ||||||||||||    
T  139154 tttttcttaatatgtgtgaaatgag 139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 571
Target Start/End: Original strand, 11637173 - 11637308
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccct-ttcacttataca 534  Q
    |||||||| ||||||||||||  ||||||| ||||||| |||  | ||||| |||  |||| || | ||||| |||||||||||    || |||||||||    
T  11637173 caattcaatatattctactttacatttatgataaagaataatgtatcaatacttggcaaagacactcaaaac-atttttctctcttaatttacttataca 11637271  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttca 571  Q
    ||||||||||||| |||||| |||| ||||| |||||    
T  11637272 ctttttcttaatatgtgtgacatgaacaaaatgttca 11637308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 37703085 - 37703147
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| ||||||||||||  |||| |||||||| |||||||||||| ||||||||||| ||||    
T  37703085 ttaaaatcatttttctctctttttcgcttataca-tttttcttaatatgtgtgaaatgatcaaa 37703147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 436 - 539
Target Start/End: Complemental strand, 5878300 - 5878196
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttc--tctccctttcacttatac 533  Q
    |||||||| ||||||||||||  ||||||| ||| | | |||  || |||| |||| |||| ||||||||||||||||||  |||| |||||| ||||||    
T  5878300 caattcaatatattctactttacatttatgataa-gtagaatgaactaatacttgacaaagacatttaaaaccatttttctctctctctttcatttatac 5878202  T
Q  534 actttt 539  Q
    ||||||    
T  5878201 actttt 5878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 479 - 561
Target Start/End: Original strand, 12653763 - 12653844
Alignment:
Q  479 caccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    |||||||| || | ||| ||| ||||||| |||||||||||   |||| ||||||| |||||||||||| |||||||||||||    
T  12653763 caccaatatttaacaaacgcacttaaaactatttttctctctacttcatttataca-tttttcttaatacgtgtgaaatgagc 12653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 436 - 554
Target Start/End: Original strand, 28802800 - 28802917
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||| ||  | | |||| | ||||| || | ||  ||| ||||||||||||||||||| |||||| |||||||     
T  28802800 caattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagagcacttaaaaccatttttctctctctttcatttataca- 28802898  T
Q  536 tttttcttaataagtgtga 554  Q
    ||| |||||||| ||||||    
T  28802899 tttgtcttaatacgtgtga 28802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 2e-42; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 430 - 594
Target Start/End: Original strand, 28330821 - 28330985
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||| ||| ||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  28330821 cactcccaattcaatataatctgctttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactt 28330920  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||| ||||| ||||    
T  28330921 atacactttttcttaataagtgtgaaatgagtcaatggctcagttaaaatgggacggagggagta 28330985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 435 - 583
Target Start/End: Original strand, 8759811 - 8759959
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| || |||||||||||||  | | | ||| ||||||||||||| |||||| |||||||    
T  8759811 ccaattcaatatattctactttgcatttatgataaagaaaaatgcatcaatagttgataagtgaactgaaacccatttttctctctctttcatttataca 8759910  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||| ||||||||| ||||||||| ||||||||| ||||||||||||    
T  8759911 cttttttttaataagtttgaaatgagtaaaaggttcggttaaaatggga 8759959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 20964368 - 20964204
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||| | ||||||||||||| ||||| | ||||||| ||| |||||||||||||||||| ||   |||  |||||||||||| |||||||||    
T  20964368 cacttccaattcgatatattctactttgcatttacgataaagaagaatgcaccaatagttgataaagacacgcaaactcatttttctctctctttcactt 20964269  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  20964268 atacactttttcttaataagtgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 20964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 37316002 - 37315838
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||| |||| |||||  ||||||||||||||||| |||||||||    
T  37316002 cactcccaattcaacatattctactttgcatttatgataaagaaaaatgcactaatagttaataagggcatccaaaaccatttttctctctctttcactt 37315903  T
Q  530 atacac-tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    || ||| ||||||||||||||||| |||||||| ||||  ||| |||||| |||| ||||| ||||    
T  37315902 at-cacttttttcttaataagtgttaaatgagccaaagtctcaattaaaacgggacggagggagta 37315838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 436 - 557
Target Start/End: Original strand, 38319944 - 38320065
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||||||||    
T  38319944 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacac 38320043  T
Q  536 tttttcttaataagtgtgaaat 557  Q
    ||||||||||||| ||||||||    
T  38320044 tttttcttaataaatgtgaaat 38320065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 436 - 583
Target Start/End: Complemental strand, 32949923 - 32949775
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaa-ccatttttctctccctttcacttataca 534  Q
    |||||||| ||||||||||||  ||||||| ||||||||||| |||||||||||||||||| || | |||| |||||||||| ||  ||||| |||||||    
T  32949923 caattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttgataaagacactcaaaaaccatttttctatctatttcatttataca 32949824  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||| |||||||||||||||||||  ||||| |||||||||||||||    
T  32949823 cttttttttaataagtgtgaaatgagtcaaaggctcagttaaaatggga 32949775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 430 - 560
Target Start/End: Original strand, 42132840 - 42132972
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggc--atttaaaaccatttttctctccctttcac 527  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| ||| || |||||||| |||| |||  | | ||| ||||||||||||| |||||||    
T  42132840 cacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagtttataagggcgcactcaaacccatttttctctctctttcac 42132939  T
Q  528 ttatacactttttcttaataagtgtgaaatgag 560  Q
    |||||||||||||||||||||||||||||||||    
T  42132940 ttatacactttttcttaataagtgtgaaatgag 42132972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 49218856 - 49218732
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||| ||||||| |||||| || | ||||||||| |||||| |||| |  || ||||||||||||| |||||||||||||||    
T  49218856 caattcaatatattatactttgaatttatgataaagagaa-tgcaccaatagctgataagggcactctaacccatttttctctctctttcacttatacac 49218758  T
Q  536 tttttcttaataagtgtgaaatgagc 561  Q
    ||||||||||||||||||||||||||    
T  49218757 tttttcttaataagtgtgaaatgagc 49218732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 436 - 580
Target Start/End: Original strand, 53848679 - 53848823
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| |||| | |||| ||||||| |||| ||| |||||||||||    
T  53848679 caattcaatatattctactttgcatttatgataaataataatgcaccaatagttgataagggcactcaaaatcatttttttctctcttacacttatacac 53848778  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 580  Q
    |||||||||||||  ||||||||| | ||| | ||| ||||||||    
T  53848779 tttttcttaataaacgtgaaatgaaccaaaagctcaattaaaatg 53848823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 436 - 560
Target Start/End: Complemental strand, 48400705 - 48400582
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| ||||||| |||||| ||||| |||||||| ||||| |||| |||||||||||| |||||| |||||||     
T  48400705 caattcaatatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcatttataca- 48400607  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||  ||||||||||||    
T  48400606 tttttcttaatctgtgtgaaatgag 48400582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 560
Target Start/End: Complemental strand, 22020584 - 22020462
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||| |||||||  || ||||||||| ||||| | | ||||||||||| ||||| || ||| ||||||||    
T  22020584 caattcaatatattctactttgcatttatgataa-gaaaaatgtacaaatagttgacaaaggaactcaaaaccatttt-ctctcactctcatttatacac 22020487  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||||||||||||||||    
T  22020486 tttttcttaataagtgtgaaatgag 22020462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 433 - 594
Target Start/End: Complemental strand, 25902539 - 25902378
Alignment:
Q  433 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 532  Q
    ||||||||||| |||||| ||||| |||||||   |||||| ||| ||| |||| || | |||  || | ||||||||||| ||  | ||||||||||||    
T  25902539 ttccaattcaatatattcaactttatatttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccattttacttcctctttcacttata 25902440  T
Q  533 cactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||| |||||||||||| |||| | |||||||  |||||| ||||||||||    
T  25902439 cactttttcttaatatgtgtgaaatgaggaaaatgctcagttattatgggacggaggaagta 25902378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 5499440 - 5499349
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||| |||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||| || |||||||||||| ||||| ||||    
T  5499440 aaaactatttttctttctctttcacttatacactttttcttaatatgtgtcaaatgaacaaaaggctcggttaaaatgggacggagggagta 5499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 475 - 594
Target Start/End: Original strand, 54217441 - 54217562
Alignment:
Q  475 aatacaccaatagttgataaaggcatttaaaaccattttt--ctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcag 572  Q
    ||||||||||||||||| || || | | ||| ||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||  |||||  | |    
T  54217441 aatacaccaatagttgacaagggtactcaaacccatttttttctctctctttcacttatacactttttcttaataagtatgaaatgagtcaaaggccccg 54217540  T
Q  573 ttaaaatgggagggaggaagta 594  Q
    ||||||||||| ||||| ||||    
T  54217541 ttaaaatgggacggagggagta 54217562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 22872462 - 22872303
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaagg--catttaaaaccatttttctctccctttcacttatac 533  Q
    |||||||| |||||| |||||| ||||||| ||| | | ||| |||||||| |||| ||| |  || |||||||||||||||||||   |||||||||||    
T  22872462 caattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccatttttctctcttcttcacttatac 22872363  T
Q  534 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    | |||||||||||| |||||||||||||||| || ||| ||||  ||||| ||||| ||||    
T  22872362 a-tttttcttaatatgtgtgaaatgagcaaatggctcacttaatttgggacggagggagta 22872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 430 - 539
Target Start/End: Complemental strand, 42051736 - 42051627
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||  ||||||||||||  ||||||| ||||||| ||| |||||||| ||| ||||| || | |||||||||||||| || |||||| ||    
T  42051736 cacttccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttgctaaagacactaaaaaccatttttctatctctttcattt 42051637  T
Q  530 atacactttt 539  Q
    ||||||||||    
T  42051636 atacactttt 42051627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 509 - 580
Target Start/End: Complemental strand, 18872656 - 18872585
Alignment:
Q  509 atttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 580  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  18872656 atttttcgctctctttcacttatacactttttcttaatacgtgtgaaatgaacaaaatgttcacttaaaatg 18872585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 567
Target Start/End: Complemental strand, 47277756 - 47277625
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||  ||||||| |||||||||||  || ||||  ||| || |||||| ||||  |||||| |||  |||| |||||||||     
T  47277756 caattcaatatattttactttacatttatgataaagaaaaatgtacaaatacctgacaagggcattgaaaaatatttttatctatcttttacttatacat 47277657  T
Q  536 tttttcttaataagtgtgaaatgagcaaaagg 567  Q
    |||||||||||| |||||||||||||||||||    
T  47277656 tttttcttaatatgtgtgaaatgagcaaaagg 47277625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 576
Target Start/End: Complemental strand, 4360482 - 4360343
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||||||  | | ||| |||||||| || | ||| ||| ||||||||||||||||||  | |||| ||||||      
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac-t 4360384  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||||||||| ||||||||||| |||| || ||||||||    
T  4360383 tttttcttaatatgtgtgaaatgaacaaatggctcagttaa 4360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 494 - 594
Target Start/End: Complemental strand, 41594864 - 41594764
Alignment:
Q  494 aaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagt 593  Q
    |||||| | ||||||||||||||||| |||||||||| ||||||||||| ||||  |||||||||| ||||||| ||  ||| ||||||| ||||| |||    
T  41594864 aaggcactcaaaaccatttttctctctctttcacttaaacactttttctcaatatatgtgaaatgaacaaaaggctcgcttataatgggacggagggagt 41594765  T
Q  594 a 594  Q
    |    
T  41594764 a 41594764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 576
Target Start/End: Original strand, 33047518 - 33047664
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||||||||||||| |||||| |||||||||||||| ||  | | |||  ||||||| || | ||| ||| |||||||||||||||||||   ||   |    
T  33047518 tcacttccaattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttttctctcttctttgtt 33047617  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||| |||||||||||| ||||||||||||| || || ||||||||    
T  33047618 tataca-tttttcttaataggtgtgaaatgagctaatggctcagttaa 33047664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 559
Target Start/End: Complemental strand, 34791026 - 34790903
Alignment:
Q  436 caattcaacatattctactttgta--tttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 533  Q
    |||||||| |||||||||||| ||  |||||| ||||||| ||| ||| |||| |||||||| ||| | |||| |||||||||||| |||||| ||||||    
T  34791026 caattcaatatattctacttt-tacttttatgataaagaagaatgcacaaatacttgataaaagcactcaaaatcatttttctctcactttcatttatac 34790928  T
Q  534 actttttcttaataagtgtgaaatga 559  Q
    || ||||||||||| ||||| |||||    
T  34790927 ac-ttttcttaatatgtgtgcaatga 34790903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 577
Target Start/End: Complemental strand, 39052975 - 39052835
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||||||| || | |||  | ||||| | || |||||| |||||||     
T  39052975 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaattcttttttttttctctttcatttataca- 39052877  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
    |||||||||||  |||||||||||| |||  ||||| |||||    
T  39052876 tttttcttaatctgtgtgaaatgagaaaattgttcaattaaa 39052835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 432 - 596
Target Start/End: Original strand, 28279866 - 28280029
Alignment:
Q  432 cttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttat 531  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||| |||||||| || | |||| || | ||||| |||| ||| || ||||   ||||    
T  28279866 cttccaattaaatatattctactttatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactatttctctttctcttttctttat 28279965  T
Q  532 acactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 596  Q
    ||| |||||||||||   |||||||||   ||  || ||||||||| ||||| ||||||||||||    
T  28279966 aca-tttttcttaatctctgtgaaatggaaaattggctcagttaaactgggacggaggaagtact 28280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 436 - 556
Target Start/End: Original strand, 41436514 - 41436633
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||  | | ||| ||||||||  | | ||| ||| |||||||||||||| |||| || ||||||||||||    
T  41436514 caattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctctctctcacttatacac 41436613  T
Q  536 tttttcttaataagtgtgaaa 556  Q
     ||||||||||| ||||||||    
T  41436614 -ttttcttaatatgtgtgaaa 41436633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 46958828 - 46958904
Alignment:
Q  512 tttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||| |||||   |||||||||| |||| ||||    
T  46958828 tttctctatctttcacttatacactttttcttaatatgtgtgaaatgaacaaaatactcagttaaaaggggacggag 46958904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 576
Target Start/End: Original strand, 8295127 - 8295201
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||  |||||||||||||||| || ||||||||    
T  8295127 ttaaaacaatttttctctctctttcatttataca-tttttcttaatttgtgtgaaatgagcaaatggctcagttaa 8295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 558
Target Start/End: Complemental strand, 29550802 - 29550680
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| |||||||  | ||| ||||| || | ||||||| | ||||| ||||||||||| |||||  |||||||    
T  29550802 ccaattcaatatattctactttacatttatgataaagaatgaaacatcaatacttaaaaaaggcactcaaaactatttttctctctctttcctttataca 29550703  T
Q  535 ctttttcttaataagtgtgaaatg 558  Q
     |||||||||||  ||||||||||    
T  29550702 -tttttcttaatctgtgtgaaatg 29550680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 564
Target Start/End: Original strand, 41203763 - 41203897
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    |||||| |||||||| |||||| |||||||||||||| ||  ||| ||| || ||||| || | ||  ||| | |||||||||||||| || | |||| |    
T  41203763 tcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcatt 41203862  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| |||||||||||| |||||||| |||||||    
T  41203863 tataca-tttttcttaatacgtgtgaaacgagcaaa 41203897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 567
Target Start/End: Complemental strand, 36046039 - 36045994
Alignment:
Q  522 tttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 567  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  36046039 tttctcttatacactttttcttaataagtgtgaaatgagccaaagg 36045994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 564
Target Start/End: Original strand, 49448874 - 49448999
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||| ||||||| |||   | ||| ||| |||| |||| ||  ||| ||||||||||||||||||| | ||||||||||||     
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttataca- 49448972  T
Q  536 tttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||  |||||||||| ||||    
T  49448973 tttttcttaata--tgtgaaatgaacaaa 49448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 13529961 - 13530017
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||||||    
T  13529961 aaaaccatttttctctctctttcgcttgtacattttttcttaatatgtgtgaaatga 13530017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 429 - 576
Target Start/End: Complemental strand, 42024282 - 42024136
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||||||||||||| |||||| |||||| ||||||  ||  | | |||| ||||||| || | ||  | | ||||||||||||||||||| | |||| |    
T  42024282 tcacttccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagagtagttaaaaccatttttctctctccttcatt 42024183  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||| ||| |||||||| ||||||  |||||||| || ||||||||    
T  42024182 tataca-tttgtcttaatatgtgtgatttgagcaaatggctcagttaa 42024136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 36047174 - 36047116
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa 494  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||    
T  36047174 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataa 36047116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 588
Target Start/End: Complemental strand, 11583704 - 11583647
Alignment:
Q  531 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
    |||| ||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||    
T  11583704 tacattttttcttaataaatgtgaaatgagccaaaggctcagctaaaatgggacggag 11583647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 564
Target Start/End: Complemental strand, 40021029 - 40020892
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| |||||| || |||||||  |||| || |||| ||| |  |||| |||||||| |||| |||  |||| ||||||||||||||||| | ||||||    
T  40021029 tcactcccaatttaatatattcttttttgcatctatgataatggtaaatgcaccaatacttgacaaaaacattcaaaaccatttttctctctcattcact 40020930  T
Q  529 ta-tacac-tttttcttaataagtgtgaaatgagcaaa 564  Q
    || || || |||||||||||| ||||||||||| ||||    
T  40020929 tagtatacatttttcttaatatgtgtgaaatgaccaaa 40020892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 508 - 564
Target Start/End: Original strand, 12619792 - 12619847
Alignment:
Q  508 catttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||| | |||||||||||||| ||||||||||||||| |||||||| ||||    
T  12619792 catttttctcgctctttcacttataca-tttttcttaataagtatgaaatgaacaaa 12619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 564
Target Start/End: Original strand, 17237076 - 17237203
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||| ||   || ||| ||| |||| || | |||  || ||||||| ||||||||||| | |||| ||||| |     
T  17237076 caattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatata- 17237174  T
Q  536 tttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||||| ||||||||||||||||    
T  17237175 tttttcttaataggtgtgaaatgagcaaa 17237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 564
Target Start/End: Complemental strand, 38160226 - 38160099
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||  |||||||||||||| ||| | | ||| || ||||| |||| |||| || ||||||| ||||||||||| | || | |||||||     
T  38160226 caattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatttataca- 38160128  T
Q  536 tttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||  | | |||||||||||    
T  38160127 tttttcttaatatatataaaatgagcaaa 38160099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 486
Target Start/End: Complemental strand, 10099800 - 10099749
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaata 486  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||    
T  10099800 ccaattcaatatattctactttaaatttatgataaagaaaaatgcaccaata 10099749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 588
Target Start/End: Complemental strand, 35027578 - 35027420
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    |||||| ||||| || |||||  ||||||  |||||| |||  | |||| |||||||| |||| || | |||||||||  ||||||||| |  ||||| |    
T  35027578 tcactttcaatttaatatatttaactttgcgtttatgataataataaatgcaccaatatttgacaa-gacatttaaaattatttttctccctttttcaat 35027480  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 588  Q
    |||||||||||| |||||| ||||||||| | |||||   ||||||||||| ||| ||||    
T  35027479 tatacacttttttttaatatgtgtgaaataaacaaaatactcagttaaaataggatggag 35027420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 539
Target Start/End: Complemental strand, 35998191 - 35998088
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||  ||||||| ||||||| |||  ||||||| ||||||||| || | ||||  |||||||  || |||||| ||||||||    
T  35998191 caattcaatatattttactttacatttatgataaagaagaatgtaccaatacttgataaagacactcaaaattatttttcgttcgctttcatttatacac 35998092  T
Q  536 tttt 539  Q
    ||||    
T  35998091 tttt 35998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 564
Target Start/End: Complemental strand, 41710225 - 41710091
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | |||||| ||||||| || | ||  ||| |||||||||||||| ||||   |||| |    
T  41710225 tcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatt 41710126  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| ||| |||||||| ||||||  ||||||||    
T  41710125 tataca-tttgtcttaatatgtgtgatttgagcaaa 41710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 1920846 - 1920884
Alignment:
Q  521 ctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  1920846 ctttcacttatacattttttcttaatatgtgtgaaatga 1920884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 431 - 556
Target Start/End: Original strand, 25149479 - 25149604
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaa-gaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    ||||||||||||| |||||| |||||  ||||||| |||| ||  ||| |||||||| || | ||||||| | ||||| ||||||||||| ||||   ||    
T  25149479 acttccaattcaatatattccactttacatttatgataaaagaggaatgcaccaatacttaaaaaaggcactcaaaactatttttctctctcttttcgtt 25149578  T
Q  530 atacactttttcttaataagtgtgaaa 556  Q
    |||||| ||||||||||  ||||||||    
T  25149579 atacac-ttttcttaatctgtgtgaaa 25149604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 436 - 557
Target Start/End: Complemental strand, 54729558 - 54729434
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||| ||  | | ||||||| |||| || | |||  || ||||||| ||||||||||| |||||| |||||||     
T  54729558 caattcaatatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacat 54729459  T
Q  536 tt---tttcttaataagtgtgaaat 557  Q
    ||   |||||||||| |||||||||    
T  54729458 ttttctttcttaatatgtgtgaaat 54729434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 540
Target Start/End: Original strand, 13719811 - 13719912
Alignment:
Q  439 ttcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttt 538  Q
    ||||| ||||| ||||||  ||||||| ||||||| |||||| || || || | |||| || | ||| |||||||||| || |||||| |||||||||||    
T  13719811 ttcaatatattatactttacatttatgataaagaataatacatcattacttaacaaagacactcaaacccatttttctttctctttcatttatacacttt 13719910  T
Q  539 tt 540  Q
    ||    
T  13719911 tt 13719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 534
Target Start/End: Original strand, 49306621 - 49306718
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||| |||||| |||||| ||||||| ||  | | |||| ||||||| || | ||  ||| ||||||||||||||||||| |||||| |||||||    
T  49306621 aattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaaccatttttctctctctttcatttataca 49306718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 546
Target Start/End: Original strand, 49401686 - 49401798
Alignment:
Q  433 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 532  Q
    ||||||||||| ||||||||||||  ||||||  ||||||| |||  | ||||| |||| || | |||| ||||| ||||||||||| ||||   |||||    
T  49401686 ttccaattcaatatattctactttacatttataataaagaacaatgtatcaatacttgaaaaggacattcaaaactatttttctctctctttactttata 49401785  T
Q  533 cactttttcttaat 546  Q
    || |||||||||||    
T  49401786 ca-tttttcttaat 49401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 430 - 594
Target Start/End: Original strand, 13222095 - 13222259
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||| ||||||| ||||||| ||||||| |||||||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  13222095 cacttccaattcaatatattttactttgcatttatgataaagaagaatacaccaatagttgataagggcactcaaacccatttttctctctctttcactt 13222194  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||| |||||||||||||||||||||| ||  || || || |||||||||||| ||||| ||||    
T  13222195 atacattttttcttaataagtgtgaaataagtcaatggctcggttaaaatgggacggagggagta 13222259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 431 - 594
Target Start/End: Original strand, 314455 - 314618
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    |||| |||||||| ||||||||||||| ||||||| ||||||| ||| || ||||||||||||| |||| | ||||||||||| ||||| ||||||||||    
T  314455 actttcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcactta 314554  T
Q  531 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  314555 tacactttttcttaataagtgtgaaatgagtcaatcgctcagttaaaatgggacggagggagta 314618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 436 - 589
Target Start/End: Complemental strand, 6972614 - 6972462
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| |||| | ||||||||||| ||||| ||||||||||||||     
T  6972614 caattcaatatattctactttgcatttatgataaagaagaatgcacaaatagttgataagggcactcaaaaccatttt-ctctctctttcacttatacat 6972516  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 589  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||| |||||    
T  6972515 tttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagg 6972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 4283093 - 4282934
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||||| |||  ||||||| ||||||  ||| |||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||    
T  4283093 caattcaatatattctattttacatttatgataaagaggaatgcaccaatacttgataagggcattcaaaaccatttttctctctcttttacttatacac 4282994  T
Q  536 t-ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    | ||||||||||||  || |||||||||||||  |||||||||||| || ||||||||||    
T  4282993 ttttttcttaataaacgtaaaatgagcaaaagactcagttaaaatgagacggaggaagta 4282934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 445 - 583
Target Start/End: Complemental strand, 928603 - 928466
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||| | ||| |||||||| | || |||||||||||||  |||||||||    
T  928603 atattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaacccattttttt-tctctttcacttatacgttttttctta 928505  T
Q  545 ataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    ||||||||||||||||| || || |||||||||||||||    
T  928504 ataagtgtgaaatgagccaagggctcagttaaaatggga 928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 436 - 560
Target Start/End: Original strand, 2048325 - 2048448
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| |||| || ||| ||||||||||||||||  ||| | | ||||||||||||||| ||||||||||||||     
T  2048325 caattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttataca- 2048423  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    ||||| |||||||||||||||||||    
T  2048424 ttttttttaataagtgtgaaatgag 2048448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 429 - 560
Target Start/End: Complemental strand, 43950529 - 43950399
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    |||||| |||||||| ||||||||||||| ||||||| ||| | |||||||| ||||| || | |||  |||||||||| ||||||||||| ||||||||    
T  43950529 tcactttcaattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcact 43950430  T
Q  529 tatacactttttcttaataagtgtgaaatgag 560  Q
    |||||| ||||| |||||||||||||||||||    
T  43950429 tataca-ttttttttaataagtgtgaaatgag 43950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 435 - 560
Target Start/End: Original strand, 9724910 - 9725034
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||| ||| | |||| ||||| |||||| |||||| |||||||    
T  9724910 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttataca 9725009  T
Q  535 ctttttcttaataagtgtgaaatgag 560  Q
    | ||||||||||| ||||||||||||    
T  9725010 c-ttttcttaatatgtgtgaaatgag 9725034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 430 - 601
Target Start/End: Complemental strand, 37529151 - 37528981
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    ||||||||||||||  |||||||||||  ||||||| |||||||||||| ||||||| || | |||| || | ||||||||||||||||  | || |||     
T  37529151 cacttccaattcaatttattctactttacatttatgataaagaaaaatagaccaatacttaacaaagacactcaaaaccatttttctctatcctttacta 37529052  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactttttt 601  Q
    ||| | ||||| |||||||||||||||||| |||| |  ||||||||| ||||| ||||| |||| ||||||    
T  37529051 atata-ttttttttaataagtgtgaaatgaacaaatgactcagttaaattgggacggagggagtaatttttt 37528981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 430 - 564
Target Start/End: Original strand, 2427387 - 2427521
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| |||||||  |||||| ||| | |||||| || |||| |||||| ||| ||||||||||||   | ||| ||    
T  2427387 cactcccaattcaatatattctactttgcatttatgacaaagaagaatgctccaataattaataagggcattcaaacccatttttctctatatgtcagtt 2427486  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||||||||| | |||||||||||||    
T  2427487 atacactttttcttaataaatatgaaatgagcaaa 2427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 430 - 565
Target Start/End: Complemental strand, 38873000 - 38872867
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| |||||  ||||| |||||||| ||||||  ||| || ||||||||||||| | || | |||||||||||| | || ||| |||||    
T  38873000 cactcccaattcaatatatt--actttatatttatgataaagaggaatgcatcaatagttgataaggacactcaaaaccatttttttttctcttccactt 38872903  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaa 565  Q
     |||||||||||||||||||| ||||||||||||||    
T  38872902 ttacactttttcttaataagtatgaaatgagcaaaa 38872867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 583
Target Start/End: Original strand, 7213508 - 7213654
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||  ||||||  ||||||| ||| |||||||| |||||||||||| | |||| ||||||||||||  ||||| |||||||     
T  7213508 caattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcatttataca- 7213606  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||||||||  |||||||||||| ||| || ||| ||||| |||||    
T  7213607 tttttcttaatctgtgtgaaatgagaaaatggctcaattaaactggga 7213654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 429 - 592
Target Start/End: Complemental strand, 43427167 - 43427005
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttg-ataaaggcatttaaaaccatttttctctccctttcac 527  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||||||| ||| ||| |||||||  | || |||| | ||| | |||||||||||  |||||     
T  43427167 tcactcccaattcaatatattctattttgcatttatgataaagaagaatgcactaatagtttcacaagggcactcaaacctatttttctctc--tttcat 43427070  T
Q  528 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaag 592  Q
    |||||||||||||||||| |||| |||||||||  ||  | ||||||||||||||| ||||||||    
T  43427069 ttatacactttttcttaaaaagtatgaaatgagtcaatagctcagttaaaatgggacggaggaag 43427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 435 - 558
Target Start/End: Original strand, 24356143 - 24356265
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||||||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||||| | ||||| | ||||||||| |||||  |||||||    
T  24356143 ccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttgaaaaaggcactcaaaactagttttctctctctttcctttataca 24356242  T
Q  535 ctttttcttaataagtgtgaaatg 558  Q
    | ||||||||||  ||||||||||    
T  24356243 c-ttttcttaatctgtgtgaaatg 24356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 5425969 - 5426031
Alignment:
Q  514 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  5425969 tctctctctttcacttatacactttttcttaatacgtgtgaaatgaacaaaaggatcagttaa 5426031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 566
Target Start/End: Complemental strand, 10069659 - 10069530
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||| ||| |  |||| ||| |||| |||| ||| | | |||||| ||||||| |||| |||||||||||| |     
T  10069659 caattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcacttatata- 10069561  T
Q  536 tttttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||||||||| |||||||||||||||||||    
T  10069560 tttttcttaatgagtgtgaaatgagcaaaag 10069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 38280258 - 38280148
Alignment:
Q  448 ttctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaata 547  Q
    |||||||||  ||||||| ||||||| ||| |||||||| || | ||||||| | |||||||||||||||||  ||||  ||||||| ||||||||||||    
T  38280258 ttctactttacatttatgataaagaagaatgcaccaatatttaaaaaaggcactcaaaaccatttttctctctatttcctttataca-tttttcttaata 38280160  T
Q  548 agtgtgaaatga 559  Q
     |||||||||||    
T  38280159 tgtgtgaaatga 38280148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 435 - 556
Target Start/End: Complemental strand, 18181288 - 18181168
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||| ||||||| ||  | | ||| ||||||||  | | ||| ||| ||||||||||||||||||| || |||||||||||    
T  18181288 ccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctctctctcacttataca 18181189  T
Q  535 ctttttcttaataagtgtgaaa 556  Q
    | ||||||||||  ||||||||    
T  18181188 c-ttttcttaatctgtgtgaaa 18181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 524
Target Start/End: Original strand, 31348545 - 31348632
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctcccttt 524  Q
    ||||||| |||||||||| || ||||||| |||| || ||| |||||||||||||||| |||| | ||| ||||||||||||| ||||    
T  31348545 aattcaatatattctactatgcatttatgataaaaaagaatgcaccaatagttgataagggcactcaaacccatttttctctctcttt 31348632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 597
Target Start/End: Complemental strand, 39166771 - 39166606
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||| ||||||  ||||||| |||| || |||  ||  ||| || |||| |||||| |||| ||||||||| || |||||||||||| |    
T  39166771 ccaattcaatatattatactttacatttatgataaaaaagaatgtacacataattaataagggcattcaaaatcatttttctttctctttcacttatata 39166672  T
Q  535 c---tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactt 597  Q
        ||||| ||||||| |||||||||||||||| | ||| ||||||||||| ||||  |||||||    
T  39166671 tatattttttttaataaatgtgaaatgagcaaaaagctcaattaaaatgggacggagcgagtactt 39166606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 497 - 564
Target Start/End: Complemental strand, 45464228 - 45464162
Alignment:
Q  497 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||| ||||||| |||| | |||||||||||| |||||||||||| ||||||||||||||||    
T  45464228 gcatttaaaatcatttttttctctcattcacttataca-tttttcttaatatgtgtgaaatgagcaaa 45464162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 532
Target Start/End: Complemental strand, 1908574 - 1908472
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| ||| |||| |||  |||| || | |||||||||||||||||  ||||| ||    
T  1908574 cacttccaattcaatatattctactttacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaaccatttttctctctatttcattt 1908475  T
Q  530 ata 532  Q
    |||    
T  1908474 ata 1908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 558
Target Start/End: Original strand, 18460521 - 18460642
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  |||||||  |||||| |||  ||||||| |||| |||| || | |||| ||||||||| || |||||| ||||||||    
T  18460521 caattcaatatattctactttacatttatgacaaagaagaatgtaccaatatttgacaaagacactcaaaatcatttttctatctctttcatttatacac 18460620  T
Q  536 tttttcttaataagtgtgaaatg 558  Q
     ||||||||||  ||||||||||    
T  18460621 -ttttcttaatctgtgtgaaatg 18460642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 558
Target Start/End: Original strand, 36748181 - 36748302
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||  ||||||| ||||||| ||  |||||||| |||| ||||| | | ||||| |||||||||||  ||||  ||||||||    
T  36748181 caattcaatatattttactttaaatttatgataaagaataacgcaccaatacttgaaaaaggaactcaaaactatttttctctctatttcttttatacac 36748280  T
Q  536 tttttcttaataagtgtgaaatg 558  Q
     ||||||||||| ||||||||||    
T  36748281 -ttttcttaatatgtgtgaaatg 36748302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 430 - 557
Target Start/End: Original strand, 3199925 - 3200049
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||   |||| ||| ||||||| | || | || | ||||||||||||||||| |||||| ||    
T  3199925 cactcccaattcaatatattatactttgcatttatgataaa---aaatgcacaaatagttaacaatgacactcaaaaccatttttctctctctttcattt 3200021  T
Q  530 atacactttttcttaataagtgtgaaat 557  Q
    |||||  |||||||||||| | ||||||    
T  3200022 atacatcttttcttaataaatatgaaat 3200049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 14384133 - 14384057
Alignment:
Q  488 ttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaa 565  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||| | |||||||||||| || |||||||| |||||    
T  14384133 ttgataaag-cattcaaaaccatttttctctctctttcatttatatattttttcttaatatgtatgaaatgaacaaaa 14384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 556
Target Start/End: Original strand, 31592583 - 31592703
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||||||||||| |||  || ||| || ||||| |||| || | || |  |||| ||||||||||| |||||||||||||||    
T  31592583 caattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaa-gacactcgaaactatttttctctctctttcacttatacac 31592681  T
Q  536 -tttttcttaataagtgtgaaa 556  Q
     ||||| |||||| ||||||||    
T  31592682 ttttttattaatatgtgtgaaa 31592703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 576
Target Start/End: Original strand, 9472455 - 9472594
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||||||| |  ||||||| ||||||| |||  | ||||| |||| |||| || |  |||||||| |||| || |||||| |||||||     
T  9472455 caattcaatatattctactatacatttatgataaagaagaatgtatcaatacttgacaaagacactctaaaccattgttctatctctttcatttataca- 9472553  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||||||||| ||||||||||  |||  |||||||||||    
T  9472554 tttttcttaatatgtgtgaaatggtcaactggttcagttaa 9472594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 32556270 - 32556330
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||| ||||    
T  32556270 ttaaaaccatttttctctc--tttcacttatacac-ttttcttaatatgtgtgaaatgaacaaa 32556330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 559
Target Start/End: Original strand, 2756700 - 2756829
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    |||||||||||| || ||||||||||||  ||||||| ||| |  |||| ||| |||| |||| ||  ||| ||||||  |||||||||||   |||| |    
T  2756700 tcacttccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctcttcttcatt 2756799  T
Q  529 tatacactttttcttaataagtgtgaaatga 559  Q
     ||||| ||||||||||||||||||||||||    
T  2756800 aataca-tttttcttaataagtgtgaaatga 2756829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 6213859 - 6213778
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||| |||||||||||  | |||||| || || |||||||||||||||||||||||||||||||  ||| ||||| |||||    
T  6213859 ttaaaatcatttttctctttcattcactaattca-tttttcttaataagtgtgaaatgagcaaaagactcacttaaattggga 6213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 559
Target Start/End: Original strand, 14890373 - 14890470
Alignment:
Q  459 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| ||||||| ||| ||| |||| ||||||||| || | |||||||||||| |||  |||||| ||||||| ||||||||| || ||||||||||    
T  14890373 atttatgataaagaagaatgcactaatacttgataaagacactcaaaaccatttttatct--ctttcatttataca-tttttcttagtatgtgtgaaatg 14890469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 564
Target Start/End: Complemental strand, 883159 - 883100
Alignment:
Q  504 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||| || ||||||||||||||| ||||||||| | ||||||||||| ||||    
T  883159 aaaccatttttctttctctttcacttatacac-ttttcttaaaatgtgtgaaatgaacaaa 883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 560
Target Start/End: Complemental strand, 8550651 - 8550593
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 560  Q
    ||||||||| ||||||||| |||||||||||||| ||||||| |||  ||||||||||||    
T  8550651 ttaaaaccacttttctctctctttcacttataca-tttttctaaatgtgtgtgaaatgag 8550593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 567
Target Start/End: Complemental strand, 12950026 - 12949908
Alignment:
Q  448 ttctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaata 547  Q
    |||||||||| ||||||| |||| |  ||| |||||||| |||| || | || | ||||  |||||| |||| |||||||||||||| |||||| |||||    
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgacaa-gacactcaaaattatttttttctctctttcacttatacattttttcgtaata 12949928  T
Q  548 agtgtgaaatgagcaaaagg 567  Q
      |||||||||| |||||||    
T  12949927 tatgtgaaatgaacaaaagg 12949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 28527062 - 28527124
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||||||| | || | |||| ||||||| |||||||||||| ||||||||||||||||    
T  28527062 ttaaaaccatttttttttctccttcatttataca-tttttcttaatatgtgtgaaatgagcaaa 28527124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 560
Target Start/End: Original strand, 40965112 - 40965170
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 560  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| ||||||||||||    
T  40965112 ttaaaactatttttctctctccttcatttataca-tttttcttaatacgtgtgaaatgag 40965170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 44736964 - 44737026
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| ||||||| |||| | || ||||||||| |||||||||||| ||||||||||||||||    
T  44736964 ttaaaatcatttttatctctcattaacttataca-tttttcttaatatgtgtgaaatgagcaaa 44737026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 445 - 559
Target Start/End: Original strand, 3123688 - 3123801
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    |||||| | |||||||||||| ||  ||| ||| |||||||| || || || ||| ||||||  |||||||||||   |||| ||||||| |||||||||    
T  3123688 atattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaaagcacttaaaattatttttctctctacttcagttataca-tttttctta 3123786  T
Q  545 ataagtgtgaaatga 559  Q
    ||| |||||||||||    
T  3123787 atatgtgtgaaatga 3123801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 511 - 557
Target Start/End: Complemental strand, 5007240 - 5007194
Alignment:
Q  511 ttttctctccctttcacttatacactttttcttaataagtgtgaaat 557  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  5007240 ttttctctctcttttacttatacacattttcttaatatgtgtgaaat 5007194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 473 - 559
Target Start/End: Complemental strand, 43077763 - 43077678
Alignment:
Q  473 aaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    ||||| ||||||||||| | ||   |||||||||| ||||||||||| | |||| ||||||| ||| |||||||| |||||||||||    
T  43077763 aaaatgcaccaatagttaacaagtacatttaaaactatttttctctctcattcatttataca-tttgtcttaatacgtgtgaaatga 43077678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 571
Target Start/End: Original strand, 44024825 - 44024875
Alignment:
Q  521 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttca 571  Q
    |||||||||||| | |||||||||||| ||||||| ||| |||||||||||    
T  44024825 ctttcacttatagattttttcttaatacgtgtgaagtgaacaaaaggttca 44024875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 436 - 534
Target Start/End: Complemental strand, 44424337 - 44424241
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    |||||||| |||||| |||||| ||||||| |||  |||||| || ||||| |||| || | |||| ||||||||||| ||||| ||||||||||||||    
T  44424337 caattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaa-gacattcaaaaccatttt-ctctctctttcacttataca 44424241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 561
Target Start/End: Complemental strand, 435087 - 435026
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacac-tttttcttaataagtgtgaaatgagc 561  Q
    ||||||| |||||| |||| |||||| |||||||  |||||||||||| |||||||||||||    
T  435087 ttaaaactatttttgtctctctttcatttatacatatttttcttaatacgtgtgaaatgagc 435026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 594
Target Start/End: Complemental strand, 10394295 - 10394202
Alignment:
Q  498 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||  ||||||||||| | |||  ||||||| |||||||||||  ||||||||||| ||||  ||||||||||  ||||| ||||||||||    
T  10394295 catttaaaattatttttctctctccttcttttataca-tttttcttaat--gtgtgaaatgaacaaatagttcagttaatttgggatggaggaagta 10394202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 577
Target Start/End: Complemental strand, 14306072 - 14306031
Alignment:
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
    ||||||||||||| |||||||||||||||| ||||| |||||    
T  14306072 tttttcttaataaatgtgaaatgagcaaaatgttcacttaaa 14306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 566
Target Start/End: Original strand, 39159717 - 39159780
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||||| |||||||||||| || |||||  |||| ||||||| |||||||||||||||||||||||    
T  39159717 ttaaaatcatttttctctctctatcactattaca-tttttct-aataagtgtgaaatgagcaaaag 39159780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 566
Target Start/End: Complemental strand, 39209477 - 39209414
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||||| |||||||||||| || |||||  |||| ||||||| |||||||||||||||||||||||    
T  39209477 ttaaaatcatttttctctctctatcactattaca-tttttct-aataagtgtgaaatgagcaaaag 39209414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 3e-38; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 430 - 583
Target Start/End: Complemental strand, 15371943 - 15371791
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| | || | ||||||||||||||||| |||||||||    
T  15371943 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataa-gacactcaaaaccatttttctctcgctttcactt 15371845  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    ||||||||||||||||||| |||||||||| | || || |||||||||||||||    
T  15371844 atacactttttcttaataattgtgaaatgaaccaagggctcagttaaaatggga 15371791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 15325180 - 15325337
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||| ||| ||||||||||||| ||||| | ||||||| || ||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  15325180 caatccaatatattctactttgcatttacgataaagaagaacacaccaatagttgataa-ggcattcaaaaccaattttctctctctttcacttatacac 15325278  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||| |||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  15325279 tttttcttaataattgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 15325337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 436 - 583
Target Start/End: Complemental strand, 15321299 - 15321153
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||  ||||||||||| |||| | || | ||||||| ||||||||| |||||| ||||||||    
T  15321299 caattcaatatattctactttgcatttatgataaagaagaacgcaccaatagtttataa-gacactgaaaaccaattttctctctctttcagttatacac 15321201  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    ||||||||||||| |||||||| ||| || || |||||||||||||||    
T  15321200 tttttcttaataattgtgaaataagccaagggatcagttaaaatggga 15321153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 581
Target Start/End: Original strand, 15355608 - 15355752
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | ||||||| |||||||||  ||||||||||||||    
T  15355608 caattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataa-gacactcaaaaccaattttctctctttttcacttatacac 15355706  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 581  Q
    ||||||||||||| ||| |||||| | ||  | |||||||||||||    
T  15355707 tttttcttaataattgtaaaatgaaccaagagctcagttaaaatgg 15355752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 34803781 - 34803621
Alignment:
Q  436 caattcaacatattctactttgtatttatgcta--aagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 533  Q
    |||||||| ||||| || |||| ||||||| ||  ||||  ||| || ||||||||||||||| || | ||||||||||| ||||| |||||  ||||||    
T  34803781 caattcaatatattttattttgcatttatgatataaagaggaatgcatcaatagttgataaagacactcaaaaccattttcctctctctttcctttatac 34803682  T
Q  534 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||||||||| || || ||| ||||||||||| ||||| ||||    
T  34803681 actttttcttaataagtgtgaaatgagctaagggctcaattaaaatgggacggagggagta 34803621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 435 - 594
Target Start/End: Complemental strand, 33921544 - 33921386
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||  || | ||||||||||||||||| | |||||| ||| |    
T  33921544 ccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttttctctctccttcactaatata 33921445  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
     |||||||||||||||| |||||||||||| || ||||||||||||||| ||||| ||||    
T  33921444 -tttttcttaataagtgcgaaatgagcaaatggctcagttaaaatgggacggagggagta 33921386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 436 - 583
Target Start/End: Complemental strand, 15351457 - 15351311
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||| ||| ||||||| ||||||| ||  || ||||||||||||| |||| | |||| || ||||||||| | ||||||||||||     
T  15351457 caattcaatatattctaccttgcatttatgataaagaagaacgcatcaatagttgataa-ggcactaaaaatcaattttctctctcattcacttatacat 15351359  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    ||||||||||||| |||||||||||  || | |||| |||||||||||    
T  15351358 tttttcttaataattgtgaaatgagtcaaggattcaattaaaatggga 15351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 438 - 540
Target Start/End: Complemental strand, 3166180 - 3166078
Alignment:
Q  438 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 537  Q
    |||||| ||||||||||||  ||||||| |||||||||||||| ||||| ||| ||||| || | ||||| ||||||||||| |||||| ||||||||||    
T  3166180 attcaatatattctactttacatttatgataaagaaaaatacatcaatacttgttaaagacactcaaaactatttttctctctctttcatttatacactt 3166081  T
Q  538 ttt 540  Q
    |||    
T  3166080 ttt 3166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 581
Target Start/End: Complemental strand, 31076005 - 31075854
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| ||||| || |||||||||||| |||  |  ||| ||||||||||||| |||| || | || |||||||||||||| ||||||||    
T  31076005 tcactcccaattcaatatattatattttgtatttatgataagaaggaatgcaccaatagttga-aaagacactcaataccatttttctctctctttcact 31075907  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 581  Q
    | |||| |||||||||||  | ||||||||| ||||| | ||| |||||||||    
T  31075906 tgtacattttttcttaatgtgggtgaaatgaacaaaatgatcacttaaaatgg 31075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 540
Target Start/End: Complemental strand, 3874123 - 3874020
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| |||||| |||||  ||||||| ||||||| ||| |||||||| |||| |||| || | |||| ||||||| |||| |||||| |||||||||    
T  3874123 aattcaatatattcaactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacact 3874024  T
Q  537 tttt 540  Q
    ||||    
T  3874023 tttt 3874020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 561
Target Start/End: Original strand, 4552936 - 4553059
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttc-act 528  Q
    |||| |||||| || |||||||| |||| ||||||| ||||||| ||| |||||||||||         | | ||||||||||||||||| ||||  |||    
T  4552936 cactcccaatttaatatattctaatttgcatttatgataaagaagaatgcaccaatagtt---------actcaaaaccatttttctctctctttttact 4553026  T
Q  529 tatacactttttcttaataagtgtgaaatgagc 561  Q
    ||||||  |||||||||||||||||||||||||    
T  4553027 tatacatattttcttaataagtgtgaaatgagc 4553059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 594
Target Start/End: Original strand, 16126318 - 16126402
Alignment:
Q  510 tttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||| |||| ||||| ||| ||||||||||||||||| ||||||||||| |||||   |||||||||||| || ||||| ||||    
T  16126318 tttttttctctctttcgcttttacactttttcttaatacgtgtgaaatgaacaaaatagtcagttaaaatgagacggagggagta 16126402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 431 - 559
Target Start/End: Complemental strand, 3604679 - 3604552
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| |||||| |||||| |||||   ||| | | ||| |||||||| || | ||  | | ||||||||||||||||||| |||| | |||    
T  3604679 acttccaattcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccatttttctctctcttttattta 3604580  T
Q  531 tacactttttcttaataagtgtgaaatga 559  Q
    |||| ||| |||||||| |||||||||||    
T  3604579 taca-tttgtcttaatatgtgtgaaatga 3604552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 561
Target Start/End: Original strand, 15081521 - 15081580
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||||    
T  15081521 ttaaaactatttttctctcaccttcatttataca-tttttcttaatacgtgtgaaatgagc 15081580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 497 - 561
Target Start/End: Original strand, 33109467 - 33109530
Alignment:
Q  497 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    ||||||||||| ||||||||||| | ||||  |||||| |||||||||||| |||||||||||||    
T  33109467 gcatttaaaactatttttctctctcattcatctataca-tttttcttaatacgtgtgaaatgagc 33109530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 545
Target Start/End: Original strand, 20027637 - 20027724
Alignment:
Q  458 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaa 545  Q
    |||||||| ||||||| ||| |||||||| || | |||| || | |||| |||||| || |  |||||||||||||||||||||||||    
T  20027637 tatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaatcattttgctatttctttcacttatacactttttcttaa 20027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 498 - 564
Target Start/End: Complemental strand, 7739530 - 7739465
Alignment:
Q  498 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||| |||| |||||||| || |||||||||||||| ||||||||| ||  |||||||||||||||    
T  7739530 cattttaaactatttttctatctctttcacttataca-tttttcttattacatgtgaaatgagcaaa 7739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 589
Target Start/End: Original strand, 20383944 - 20384030
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 589  Q
    |||||||||||| |||| |||||||||| | || ||||||||||| |||| ||| || ||||| ||||| | | ||||||| |||||    
T  20383944 aaaaccatttttttctctctttcacttacataccttttcttaatatgtgttaaaggaacaaaaagttcactaataatgggatggagg 20384030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 431 - 557
Target Start/End: Original strand, 31265807 - 31265932
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| |||||| |||||  ||||||| ||  | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| | |||| |||    
T  31265807 acttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactatttttctctctccttcattta 31265906  T
Q  531 tacactttttcttaataagtgtgaaat 557  Q
    |||| ||| |||||||| |||||||||    
T  31265907 taca-tttgtcttaatatgtgtgaaat 31265932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 430 - 496
Target Start/End: Complemental strand, 33018024 - 33017958
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaag 496  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||||    
T  33018024 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaag 33017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 430 - 594
Target Start/End: Original strand, 32776010 - 32776174
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || | ||||||| | ||||||||||||||||| | |||||||    
T  32776010 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcactt 32776109  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||| ||||| | ||||| ||||    
T  32776110 atacactttttcttaatatgtgtgaaatgagcaaaaggctcatttataatggaacggagggagta 32776174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 435 - 594
Target Start/End: Complemental strand, 29997104 - 29996945
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    |||| |||| ||||| ||||||| ||||||| ||||||| ||| |||||||| || | || | |||| |||||||||||||| || ||||||||||||||    
T  29997104 ccaactcaatatattatactttgcatttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccatttttctttctctttcacttataca 29997005  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| ||| ||||||||||    
T  29997004 ctttttcttaataagtgtgaaatgagtcaaaggctcagttaaaataggacggaggaagta 29996945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 440 - 590
Target Start/End: Original strand, 47238254 - 47238404
Alignment:
Q  440 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 539  Q
    ||||||| || ||||||| ||||||| ||||||| ||| ||||||| |||||||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  47238254 tcaacattttgtactttgcatttatgataaagaagaatgcaccaattgttgataagggcactcaaaaccatttttctctctctttcacttatacactttt 47238353  T
Q  540 tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagga 590  Q
    |||||||||||||||||||||| || |  || |||||||||| | ||||||    
T  47238354 tcttaataagtgtgaaatgagccaatgactcggttaaaatggaacggagga 47238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 430 - 594
Target Start/End: Original strand, 37264340 - 37264502
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||  ||| || ||||| |||| || |||| | |||||||||||||||||  ||||||||    
T  37264340 cactcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctc--tttcactt 37264437  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||| ||||    
T  37264438 atatactttttcttaatatgtgtgaaatgagcaaaaggctcacttaaaatgggacggagggagta 37264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 436 - 560
Target Start/End: Complemental strand, 32972092 - 32971968
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| |||||||  ||| || ||| |||||||||||||||| |||| | ||||||||||||||||| ||||||||||||||     
T  32972092 caattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttatacat 32971993  T
Q  536 tttttcttaataagtgtgaaatgag 560  Q
    |||||||||||||||||||||||||    
T  32971992 tttttcttaataagtgtgaaatgag 32971968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 440 - 560
Target Start/End: Complemental strand, 23111159 - 23111039
Alignment:
Q  440 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 539  Q
    |||| ||||||||||||  ||||||| ||||||| ||| |||||||||||||||||| |||| |||| ||||||||||||  ||||| ||||||| ||||    
T  23111159 tcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataaagacattcaaaatcatttttctctctatttcatttatacattttt 23111060  T
Q  540 tcttaataagtgtgaaatgag 560  Q
    ||||||||||| |||||||||    
T  23111059 tcttaataagtatgaaatgag 23111039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 436 - 544
Target Start/End: Complemental strand, 10355809 - 10355701
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| |||||| |||| |||||||||||||||| | || | |||||||||||| |||| ||| |||||||||||    
T  10355809 caattcaatatattctactttgcatttatgataaagagaaatgcaccaatagttgataaggacactcaaaaccatttttttctctcttacacttatacac 10355710  T
Q  536 tttttctta 544  Q
    |||||||||    
T  10355709 tttttctta 10355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 430 - 526
Target Start/End: Original strand, 38589761 - 38589857
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttca 526  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  38589761 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataagggcattcaaaaccatttttctctctctttca 38589857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 445 - 580
Target Start/End: Original strand, 8150001 - 8150135
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    |||||||||||||  |||||| ||| | ||||| ||| |||| |||| |||  || ||||||||||||||||||| |||||||||||||| |||||||||    
T  8150001 atattctactttgattttatgataatggaaaatgcacaaatatttgacaaaa-cacttaaaaccatttttctctctctttcacttatacattttttctta 8150099  T
Q  545 ataagtgtgaaatgagcaaaaggttcagttaaaatg 580  Q
    ||| ||||||||||| || ||| |||| ||| ||||    
T  8150100 atatgtgtgaaatgaacacaagattcatttataatg 8150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 435 - 558
Target Start/End: Complemental strand, 45218233 - 45218111
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||||||| |||||  |||||||    
T  45218233 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttcctttataca 45218134  T
Q  535 ctttttcttaataagtgtgaaatg 558  Q
    | ||||||||||  ||||||||||    
T  45218133 c-ttttcttaatttgtgtgaaatg 45218111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 436 - 558
Target Start/End: Original strand, 2849288 - 2849409
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| ||   ||||| ||||||||||| |||||| |||||||     
T  2849288 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctctctttcatttataca- 2849386  T
Q  536 tttttcttaataagtgtgaaatg 558  Q
    |||||||||||| ||||||||||    
T  2849387 tttttcttaatatgtgtgaaatg 2849409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 503 - 589
Target Start/End: Complemental strand, 33774051 - 33773965
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 589  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||   ||| ||||||||||||||||| |||||    
T  33774051 aaaactatttttctctctctttcacttatacactttttcttaatatatgtgaaatgaattaaaagttcagttaaaatgggacggagg 33773965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 43007927 - 43008057
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac-a 534  Q
    |||||||| |||||||| |||  ||||||| ||||||||||| ||| |||| |||| |||| || | ||||| ||||||| ||| |||||||||||||      
T  43007927 caattcaatatattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttttccctctctttcacttatacgt 43008026  T
Q  535 ctttttcttaataagtgtgaaatgagcaaaa 565  Q
     |||||||||| | |||||||||||||||||    
T  43008027 ttttttcttaacatgtgtgaaatgagcaaaa 43008057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 430 - 558
Target Start/End: Complemental strand, 30659560 - 30659433
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||| ||||||| |||||||||||| |||||||| ||||||| ||  ||| |||| |||| ||||||| | ||||| ||||||||||| |||||  ||    
T  30659560 cacttcaaattcaatatattctactttatatttatgataaagaagaacgcacaaatatttgacaaaggcactcaaaactatttttctctctctttccttt 30659461  T
Q  530 atacactttttcttaataagtgtgaaatg 558  Q
     ||||| ||||||||||  ||||||||||    
T  30659460 gtacac-ttttcttaatctgtgtgaaatg 30659433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 559
Target Start/End: Original strand, 9602894 - 9603017
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| || |||||||||| ||||||| |||| || ||| || |||||||| | ||  ||||| ||| | |||||| |||| ||| ||||||| |||    
T  9602894 caattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccacttatgcac 9602993  T
Q  536 tttttcttaataagtgtgaaatga 559  Q
    ||||| ||||||||||||||||||    
T  9602994 ttttttttaataagtgtgaaatga 9603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 559
Target Start/End: Original strand, 9830465 - 9830588
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| || |||||||||| ||||||| |||| || ||| || |||||||| | ||  ||||| ||| | |||||| |||| ||| ||||||| |||    
T  9830465 caattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccacttatgcac 9830564  T
Q  536 tttttcttaataagtgtgaaatga 559  Q
    ||||| ||||||||||||||||||    
T  9830565 ttttttttaataagtgtgaaatga 9830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 34064248 - 34064405
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| |||  || ||| |||||||| || | || | || | ||||| |||||||||||  ||||| ||||||||    
T  34064248 caattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaa-gacactcaaaactatttttctctctatttcatttatacac 34064346  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||| |||||| |||||||| ||  |||||| |||| ||||| |||||||||| ||||    
T  34064347 ttttttttaatatgtgtgaaaagaaaaaaaggctcagataaaacgggagggagggagta 34064405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 6697130 - 6697242
Alignment:
Q  452 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtg 551  Q
    |||||| ||||||| ||| ||||||| ||||||||   || |||  || ||||||  ||||||||||  |||||||||||||| ||||||||||||||||    
T  6697130 actttgcatttatgataatgaaaaatgcaccaatacacgacaaaa-cacttaaaattatttttctctttctttcacttatacattttttcttaataagtg 6697228  T
Q  552 tgaaatgagcaaaa 565  Q
    |||||||| |||||    
T  6697229 tgaaatgaacaaaa 6697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 21446478 - 21446594
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 544  Q
    ||||| |||||| |||||||| |||| || ||| ||| |||| || |||| | || | ||||  ||||||||||| |||||||||||||| |||||||||    
T  21446478 atattatactttatatttatgataaaaaagaatgcactaataattaataaggacactcaaaattatttttctctctctttcacttatacaatttttctta 21446577  T
Q  545 ataagtgtgaaatgagc 561  Q
    |||||| | ||||||||    
T  21446578 ataagtataaaatgagc 21446594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 583
Target Start/End: Complemental strand, 39143680 - 39143601
Alignment:
Q  504 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    |||||||| |||||||  |||||| ||||||||||||||| ||| ||||||||||||||||||  ||| ||| |||||||    
T  39143680 aaaccattattctctctatttcacatatacactttttctttatacgtgtgaaatgagcaaaagactcacttataatggga 39143601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 601
Target Start/End: Original strand, 27621913 - 27622035
Alignment:
Q  479 caccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaa 578  Q
    |||||||| ||||||| || | | |||| ||||||||| || ||||   ||||||| |||||||||||||||||||||||||  ||  | ||| ||||||    
T  27621913 caccaataattgataagggtactcaaaatcatttttctttctcttttcattatacattttttcttaataagtgtgaaatgagttaagagctcaattaaaa 27622012  T
Q  579 tgggagggaggaagtactttttt 601  Q
    ||||| ||||| |||| ||||||    
T  27622013 tgggacggagggagtagtttttt 27622035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 36070138 - 36070247
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||  ||||||||||||   |||||| ||||||| ||| |||||||| |||| |||| || | ||||||||||| ||||| |||||| |||||||     
T  36070138 caattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctctctttcatttataca- 36070236  T
Q  536 tttttcttaat 546  Q
    |||||||||||    
T  36070237 tttttcttaat 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 9658937 - 9658993
Alignment:
Q  503 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||||||    
T  9658937 aaaaccatttttctctctctttcgcttgtacattttttcttaatatgtgtgaaatga 9658993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 576
Target Start/End: Original strand, 11616660 - 11616733
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    ||||||||||||||||||| | |||| |||||||  |||| |||||| |||||||||||||||| || ||||||||    
T  11616660 ttaaaaccatttttctctctccttcatttataca--tttttttaatatgtgtgaaatgagcaaatggctcagttaa 11616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 514
Target Start/End: Original strand, 18731466 - 18731550
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccattttt 514  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| ||||||||| || | ||||| ||||||    
T  18731466 cacttccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttgataaagacactcaaaacgattttt 18731550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 564
Target Start/End: Complemental strand, 45890888 - 45890805
Alignment:
Q  480 accaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||| || | ||| ||||||||||||||||||||||| | |||  ||||||| |||||||||||| ||||||||||| ||||    
T  45890888 accaatacttaacaaaagcatttaaaaccatttttctctctccttcttttataca-tttttcttaatacgtgtgaaatgaacaaa 45890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 539
Target Start/End: Complemental strand, 39343744 - 39343644
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||||||| |||| |||| ||| ||| | ||||| ||| ||||||  |||||| |||||||||    
T  39343744 aattcaatatattctactttacatttatgataaagaagaatacacaaatacttgacaaatgcactcaaaacgattgttctct--ctttcatttatacact 39343647  T
Q  537 ttt 539  Q
    |||    
T  39343646 ttt 39343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 5724724 - 5724660
Alignment:
Q  494 aaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 559  Q
    |||||| ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||    
T  5724724 aaggcacttaaaactatttttctctctccttcatttataca-tttttcttaatacgtgtgaaatga 5724660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 559
Target Start/End: Complemental strand, 7425957 - 7425829
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaagg-catttaaaaccatttttctctccctttcactt 529  Q
    ||||||||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| || |  |||  || ||||||||||||||||||| | |||| ||    
T  7425957 acttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcattt 7425858  T
Q  530 atacactttttcttaataagtgtgaaatga 559  Q
    ||||| ||| |||||||| |||||||||||    
T  7425857 ataca-tttgtcttaatacgtgtgaaatga 7425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 566
Target Start/End: Complemental strand, 36194684 - 36194599
Alignment:
Q  482 caatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt-tttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||| || |||||||||||||||||||||||||| || |  ||| ||||||| || |||||||| || ||||||||||| |||||    
T  36194684 caataattaataaaggcatttaaaaccatttttctttctcgctcatttatacatttctttcttaacaaatgtgaaatgagtaaaag 36194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 556
Target Start/End: Complemental strand, 3667951 - 3667832
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| |||  || ||| ||| |||| ||||||| | || | ||||  ||||||||||   ||||||||||||||    
T  3667951 caattcaatatattctactttacatttatgataagaaataatgcactaatacttgataa-gacactcaaaattatttttctctttttttcacttatacac 3667853  T
Q  536 tttttcttaataagtgtgaaa 556  Q
    | |||||||||| ||||||||    
T  3667852 tatttcttaatatgtgtgaaa 3667832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 663 - 719
Target Start/End: Complemental strand, 13590918 - 13590862
Alignment:
Q  663 catgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaa 719  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||| || | |||||||    
T  13590918 catgatttcgtcaatctggtccttagagaaattagcataacaataatcagaaacaaa 13590862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 817
Target Start/End: Complemental strand, 13590735 - 13590644
Alignment:
Q  726 actaattatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttca 817  Q
    |||||| |||||||||| |||||| |||  |||||| |  ||||||||| ||| ||| || ||||||||| || ||||||||||||| ||||    
T  13590735 actaatcatgaattttcaaattacatctataaaactatacaaatttgagcatttttaccactgagaaaccaaatagtaacacactgaattca 13590644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 519
Target Start/End: Original strand, 24288456 - 24288539
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc 519  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| ||| |||| |||| ||||||| | ||||| |||| ||||||    
T  24288456 caattcaatatattctactttacatttatgataaagaagaatgcacaaatacttgaaaaaggcactcaaaactatttatctctc 24288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 564
Target Start/End: Original strand, 29257573 - 29257707
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | |||||| ||||||| || | ||  ||| |||||||||||||| ||||   |||| |    
T  29257573 tcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatt 29257672  T
Q  529 tatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||| ||| |||||||| ||||||  ||||||||    
T  29257673 tataca-tttgtcttaatatgtgtgatttgagcaaa 29257707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 559
Target Start/End: Complemental strand, 37490692 - 37490570
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| || | |||  || |||||| |||||||||||| | |||| |||||||     
T  37490692 caattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttataca- 37490594  T
Q  536 tttttcttaataagtgtgaaatga 559  Q
    |||||||||| | |||||||||||    
T  37490593 tttttcttaacatgtgtgaaatga 37490570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 566
Target Start/End: Original strand, 39498768 - 39498838
Alignment:
Q  498 catttaaaaccatttttctctccctttcacttatacact--ttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||||||||| ||||||||||| | |||||| ||||  |  |||| |||||||||||||||||||||||||    
T  39498768 catttaaaactatttttctctctcattcactaatactatattttttttaataagtgtgaaatgagcaaaag 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 576
Target Start/End: Complemental strand, 44604487 - 44604413
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||| |||||||||||| | |||| ||||||| ||| |||||||| ||||||  |||||||| |||||||||||    
T  44604487 ttaaaatcatttttctctctccttcatttataca-tttgtcttaatatgtgtgatttgagcaaatggttcagttaa 44604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 552
Target Start/End: Complemental strand, 37496392 - 37496354
Alignment:
Q  514 tctctccctttcacttatacactttttcttaataagtgt 552  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  37496392 tctctctctttcacttatacactttttcttaatatgtgt 37496354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 23058916 - 23058972
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 558  Q
    ||||||| ||||||||||| |||||| ||||| | |||||||||||| ||||||||||    
T  23058916 ttaaaactatttttctctctctttcatttatata-tttttcttaatacgtgtgaaatg 23058972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 577
Target Start/End: Complemental strand, 31549597 - 31549556
Alignment:
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  31549597 tttttcttaataagtgtaaaatgagcaaaagactcagttaaa 31549556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 534
Target Start/End: Original strand, 33584589 - 33584694
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| | |||| ||||||| ||  | | |||||||||||| || | ||  ||| ||||||||||||||||||| | |||| |    
T  33584589 tcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatagcacttaaaaccatttttctctctccttcatt 33584688  T
Q  529 tataca 534  Q
    ||||||    
T  33584689 tataca 33584694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 561
Target Start/End: Complemental strand, 49100509 - 49100453
Alignment:
Q  504 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 561  Q
    |||| ||||||||||  |||||| ||||||| |||||||||||| |||||||||||||    
T  49100509 aaactatttttctctgtctttcatttataca-tttttcttaatacgtgtgaaatgagc 49100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 7e-36; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 437 - 594
Target Start/End: Complemental strand, 5147570 - 5147413
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | |||| |||||||||||  |||||||||||| | |    
T  5147570 aattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatatatt 5147471  T
Q  537 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||| ||||| ||||    
T  5147470 ttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagggagta 5147413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 436 - 594
Target Start/End: Original strand, 38978937 - 38979095
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    ||||| || ||||||||||||| ||||||| ||||||  |||  |||||||||| |||| |||| | |||||||||||||| || ||||| ||| |||||    
T  38978937 caatttaatatattctactttgcatttatgataaagaggaatgtaccaatagttaataagggcactcaaaaccatttttctatctctttcccttgtacac 38979036  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| ||||    
T  38979037 tttttcttaataagtgtgaaatgagtaaatggctcagttaaaatgggacggagggagta 38979095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 430 - 577
Target Start/End: Complemental strand, 13016444 - 13016298
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||| || | |||||||||||||||| | || | |||  |||||||||||| |||||||||    
T  13016444 cactcccaattcaatatattctactttgcatttatgataaagagaa-tgcaccaatagttgataaggacactcaaactcatttttctctctctttcactt 13016346  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
     ||||||||||||||||||||||||||||||| || |||||| |||||    
T  13016345 ttacactttttcttaataagtgtgaaatgagccaagggttcaattaaa 13016298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 436 - 594
Target Start/End: Complemental strand, 15564963 - 15564810
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    ||||| || ||||||||||||| ||||||| ||||     || |||||||||||||||| || | | ||||  ||||||||||| |||||||||||||||    
T  15564963 caatttaatatattctactttgcatttatgataaa-----atgcaccaatagttgataagggtactcaaaattatttttctctctctttcacttatacac 15564869  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||||||||||||||||| ||||  |||| |||||||||| ||||||||||    
T  15564868 tttttcttaataagtgtgaaatgagcgaaagactcagctaaaatgggatggaggaagta 15564810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 436 - 577
Target Start/End: Complemental strand, 13087816 - 13087676
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||| ||||||| |||||| || | |||||||||||||||| | || | |||  |||||||||||| ||||||||| |||||    
T  13087816 caattcaatatattctactttgcatttatgataaagagaa-tgcaccaatagttgataaggacactcaaactcatttttctctctctttcacttttacac 13087718  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 577  Q
    |||||||||||||||||||||||||| || |||||| |||||    
T  13087717 tttttcttaataagtgtgaaatgagccaagggttcaattaaa 13087676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 430 - 596
Target Start/End: Complemental strand, 5357898 - 5357733
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || | ||||||||||||||||| | ||||||     
T  5357898 cacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatttttctctctccttcacta 5357799  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 596  Q
    ||| | |||||||||||||||||| |||||||||| |||||| ||||| ||||| ||||| ||||||    
T  5357798 atata-tttttcttaataagtgtgtaatgagcaaatggttcaattaaattgggacggagggagtact 5357733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 438 - 560
Target Start/End: Original strand, 42818938 - 42819060
Alignment:
Q  438 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 537  Q
    |||||| ||||||||||||  ||||||| ||||||| ||| |||||||  || |||| |||| | |||||||||||||| || |||| ||||||||||||    
T  42818938 attcaatatattctactttacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccatttttctttctcttttacttatacactt 42819037  T
Q  538 tttcttaataagtgtgaaatgag 560  Q
    |||||||||||||||||||||||    
T  42819038 tttcttaataagtgtgaaatgag 42819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 582
Target Start/End: Original strand, 4194975 - 4195112
Alignment:
Q  446 tattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac-tttttctta 544  Q
    |||||||||||  ||||||| ||||||| ||| || |||||||| |||| |||| | ||||||||||||||||| |||| |||||||||| |||||||||    
T  4194975 tattctacttttcatttatgataaagaagaatgcatcaatagttcataagggcactcaaaaccatttttctctctcttttacttatacacttttttctta 4195074  T
Q  545 ataagtgtgaaatgagcaaaaggttcagttaaaatggg 582  Q
    |||||||||||||| |  || || ||||||||||||||    
T  4195075 ataagtgtgaaatgcgtcaagggctcagttaaaatggg 4195112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 581
Target Start/End: Original strand, 31090337 - 31090482
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||| | |||||||||||||  |||||| ||||||| ||| |||||||||||||||| |||| | |||| ||||||||||||  |||||||||||||     
T  31090337 caattccatatattctactttgcgtttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctctctttttcacttatacat 31090436  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 581  Q
    ||||||||||||| ||| |||||||  || |  |||||||||||||    
T  31090437 tttttcttaataaatgtaaaatgagtcaaggactcagttaaaatgg 31090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 431 - 594
Target Start/End: Complemental strand, 16926171 - 16926006
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || |  |||||| | ||||||||||||||| | ||||||||||    
T  16926171 acttccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcactta 16926072  T
Q  531 ---tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
       ||||||| || |||||| ||||||||||||||||||| ||| ||| ||||||| ||||| ||||    
T  16926071 tactacacttctt-ttaatatgtgtgaaatgagcaaaagggtcaattataatgggacggagggagta 16926006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 430 - 594
Target Start/End: Complemental strand, 39060503 - 39060340
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||| ||| ||| ||||||||| ||||||| ||||||| |||  ||||||| || | ||| ||| | ||||||||||||||||| | ||||||     
T  39060503 cacttccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctctccttcacta 39060404  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||| | ||||||||||||||||||||||||||||| |||||| ||||| ||| | ||||| ||||    
T  39060403 atata-tttttcttaataagtgtgaaatgagcaaatggttcaattaaattggaacggagggagta 39060340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 430 - 583
Target Start/End: Complemental strand, 25111229 - 25111078
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| |||| || | ||||| ||||||||||  |||||||||    
T  25111229 cacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctct--ctttcactt 25111132  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
     ||| | ||||||||||| ||||||||||||||||| | ||| ||| |||||||    
T  25111131 ttactccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatggga 25111078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 430 - 583
Target Start/End: Complemental strand, 25170320 - 25170169
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| |||| || | ||||| ||||||||||  |||||||||    
T  25170320 cacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctct--ctttcactt 25170223  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
     ||| | ||||||||||| ||||||||||||||||| | ||| ||| |||||||    
T  25170222 ttactccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatggga 25170169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 596
Target Start/End: Original strand, 31196352 - 31196512
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||| ||| ||||||||||||| || |||  ||||||||||| || |||||  ||| || | || | ||||| |||||||| || |||||| |||||||     
T  31196352 caatccaatatattctactttgcatgtataataaagaaaaatgcagcaataaatgacaaggacactcaaaactatttttctatctctttcatttatacat 31196451  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 596  Q
     ||||||||||||||||||||||||| ||   |||||||||||||||| ||||||||||||    
T  31196452 attttcttaataagtgtgaaatgagccaagaattcagttaaaatgggacggaggaagtact 31196512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 429 - 560
Target Start/End: Complemental strand, 11099559 - 11099429
Alignment:
Q  429 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 528  Q
    ||||| ||||||||| |||||| |||||||||||||| ||  | | ||| |||||||| || | |||  || ||||||| ||||||||||| |||||| |    
T  11099559 tcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcatt 11099460  T
Q  529 tatacactttttcttaataagtgtgaaatgag 560  Q
    |||||| |||||||||||| ||||||||||||    
T  11099459 tataca-tttttcttaatatgtgtgaaatgag 11099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 583
Target Start/End: Original strand, 25108600 - 25108751
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||| || | |||| || | ||||| ||||||||||  |||||||||    
T  25108600 cacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctct--ctttcactt 25108697  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
     ||| | ||||||||||| |||||||||||| |||| | ||| ||| |||||||    
T  25108698 ttactccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatggga 25108751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 583
Target Start/End: Original strand, 25167692 - 25167843
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||| || | |||| || | ||||| ||||||||||  |||||||||    
T  25167692 cacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctct--ctttcactt 25167789  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
     ||| | ||||||||||| |||||||||||| |||| | ||| ||| |||||||    
T  25167790 ttactccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatggga 25167843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 594
Target Start/End: Complemental strand, 39061028 - 39060868
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac--- 533  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||| ||| | | ||||| || | || | |||  |||||||||||| |||||||||||||       
T  39061028 aattcaatatattctactttgcatttatgataaagaagaatgcactagtggttgacaaggacactcaaactcatttttctctctctttcacttatactac 39060929  T
Q  534 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    | |||||||||||||||||||||||||  ||||  | | ||||||||||| ||||| ||||    
T  39060928 attttttcttaataagtgtgaaatgagtcaaagtctaaattaaaatgggacggagggagta 39060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 436 - 533
Target Start/End: Original strand, 15898224 - 15898321
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 533  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| || |||||||| |||| | || |||||  |||||||||||| |||||||||||||    
T  15898224 caattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaactcatttttctctctctttcacttatac 15898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 7871344 - 7871405
Alignment:
Q  434 tccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaa 495  Q
    ||||||| || ||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  7871344 tccaatttaatatattctactttacatttatgataaagaaaaatacaccaatagttgataaa 7871405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 430 - 578
Target Start/End: Original strand, 35988661 - 35988808
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||| ||||||||| |||||| |||||| ||||||| |||  |  ||| |||||||| |||| ||   || ||||||| |||||||||||  ||||||||    
T  35988661 cactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaaca-cacttaaaactatttttctctctgtttcactt 35988759  T
Q  530 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaa 578  Q
    ||| | ||||||||||||  ||||||||||  |||||||||| ||||||    
T  35988760 ataaattttttcttaatatatgtgaaatgaaaaaaaggttcatttaaaa 35988808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 431 - 559
Target Start/End: Complemental strand, 42575718 - 42575591
Alignment:
Q  431 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 530  Q
    ||||||||||||| |||||| |||||| ||||||| ||  | | |||||||||||| ||   ||  ||| ||||||||||||||||||| | |||| |||    
T  42575718 acttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcacttaaaaccatttttctctctcattcattta 42575619  T
Q  531 tacactttttcttaataagtgtgaaatga 559  Q
    |||| ||| |||||||| |||||||||||    
T  42575618 taca-tttgtcttaatatgtgtgaaatga 42575591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 435 - 557
Target Start/End: Complemental strand, 4044553 - 4044433
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||| ||||| |||| | ||||| | | | ||||| |||||||    
T  4044553 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcattcaaaatc-ttttttttttcttttcatttataca 4044455  T
Q  535 ctttttcttaataagtgtgaaat 557  Q
    | ||||||||||  |||||||||    
T  4044454 c-ttttcttaatctgtgtgaaat 4044433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 566
Target Start/End: Complemental strand, 6173055 - 6172926
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||| ||||||| ||||||| ||| |  |||| ||  |||| |||||||  ||| ||||||| |||||| ||||   |||||| |||||     
T  6173055 caattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcacttaaaactatttttatctcttcttcactaataca- 6172957  T
Q  536 tttttcttaataagtgtgaaatgagcaaaag 566  Q
    ||||||||||||||||||||||||| |||||    
T  6172956 tttttcttaataagtgtgaaatgaggaaaag 6172926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 566
Target Start/End: Complemental strand, 7311254 - 7311128
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||| ||||||| ||| |  |||| ||| |||| |||||||  ||| ||||||||||||||||||  |||| | | ||||| |    
T  7311254 aattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctct--cttttattaataca-t 7311158  T
Q  537 ttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||||||||||||| |||||| || |||||    
T  7311157 ttttcttaataagtatgaaatcagtaaaag 7311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 558
Target Start/End: Complemental strand, 36006973 - 36006849
Alignment:
Q  430 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 529  Q
    |||||||||||||  ||||||||||||  ||||||| ||||||| ||| ||| |||| |||| |||| || ||||||||||||   |||| |||| | ||    
T  36006973 cacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccattt---tctctcttttattt 36006877  T
Q  530 atacactttttcttaataagtgtgaaatg 558  Q
    ||||| |||||||||||  ||||||||||    
T  36006876 ataca-tttttcttaatctgtgtgaaatg 36006849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 589
Target Start/End: Complemental strand, 6629391 - 6629318
Alignment:
Q  516 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 589  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||  |||||| |||| |||||||||| |||||    
T  6629391 tctctctttcatttatacactttttcttaatatgtgtgaaaagaaaaaaaggctcagataaaatgggacggagg 6629318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 440 - 594
Target Start/End: Original strand, 35666922 - 35667073
Alignment:
Q  440 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 539  Q
    |||| ||||||||||||||||||||  ||| |  |||| |||||||| || | ||| ||| ||||||| ||||||||||||  |||| | ||| | ||||    
T  35666922 tcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatttttctctcc--ttcaataata-aatttt 35667018  T
Q  540 tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    ||||||||| |||||||||||  ||||  ||| ||||| |||||| |||| ||||    
T  35667019 tcttaataaatgtgaaatgagtgaaagactcacttaaattgggagagagggagta 35667073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 536 - 594
Target Start/End: Original strand, 22983076 - 22983134
Alignment:
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||||||||||| ||||||||||| ||||| ||| ||||||||||||| ||||| ||||    
T  22983076 tttttcttaatatgtgtgaaatgaacaaaatgtttagttaaaatgggacggagggagta 22983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 792095 - 792168
Alignment:
Q  521 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||| |||||||||| | |||||||||  |||||||||||||||| | ||| ||| |||||||| |||||||||    
T  792095 cttttacttatacacatattcttaatatatgtgaaatgagcaaaatgctcacttataatgggagagaggaagta 792168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 564
Target Start/End: Complemental strand, 41594878 - 41594795
Alignment:
Q  480 accaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||| |||| |||  |||||||||  ||||||||||| | |||||||||| | |||||||||||| || |||||||||||||    
T  41594878 accaatacttgacaaaaacatttaaaattatttttctctctcattcacttatata-tttttcttaatatgtatgaaatgagcaaa 41594795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 858433 - 858495
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    |||||||||||||| |||| | || | ||||||| |||||||||||| ||||||||||||||||    
T  858433 ttaaaaccatttttttctctcctttatttataca-tttttcttaatatgtgtgaaatgagcaaa 858495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 560
Target Start/End: Original strand, 3725284 - 3725342
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 560  Q
    ||||||||||||||||||| | |||  ||||||| |||||||||||| ||||||||||||    
T  3725284 ttaaaaccatttttctctctccttcctttataca-tttttcttaatatgtgtgaaatgag 3725342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 594
Target Start/End: Original strand, 15898605 - 15898668
Alignment:
Q  531 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 594  Q
    |||| |||||||||||||||||||||||| | ||||  ||| ||||||||||| ||||| ||||    
T  15898605 tacattttttcttaataagtgtgaaatgaactaaagactcatttaaaatgggacggagggagta 15898668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 560
Target Start/End: Complemental strand, 25344742 - 25344692
Alignment:
Q  509 atttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 560  Q
    ||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  25344742 atttttctctctctttcacttataca-tttttcttagtatgtgtgaaatgag 25344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 548
Target Start/End: Complemental strand, 35012851 - 35012812
Alignment:
Q  509 atttttctctccctttcacttatacactttttcttaataa 548  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  35012851 atttttctttctctttcacttatacactttttcttaataa 35012812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 540
Target Start/End: Original strand, 35968762 - 35968857
Alignment:
Q  445 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt 540  Q
    |||||||||||| |||||||  ||||||| |||  || |||| |||| |||| || | ||||| |||||||| || |||||| |||||||||||||    
T  35968762 atattctactttatatttataataaagaagaatgtactaatacttgacaaagacactcaaaactatttttctttctctttcatttatacacttttt 35968857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 42211427 - 42211489
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 564  Q
    ||||||||||||||||| | | |||| ||||||| ||||| |||||| ||||||||||||||||    
T  42211427 ttaaaaccatttttctcccaccttcatttatacatttttt-ttaatatgtgtgaaatgagcaaa 42211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 566
Target Start/End: Complemental strand, 39212550 - 39212500
Alignment:
Q  516 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 566  Q
    |||| |||||||||||||| |||||||||||| | ||||||||| ||||||    
T  39212550 tctctctttcacttatacaatttttcttaatatgcgtgaaatgaacaaaag 39212500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 564
Target Start/End: Original strand, 33988232 - 33988360
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| |||||| |||||  ||||||| ||  | | |||||||||||| || | |||  || |||||||||||||||| || | |||| |||||||    
T  33988232 ccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttataca 33988331  T
Q  535 ctttttcttaataagtgtgaaatgagcaaa 564  Q
     ||| |||||||| ||||||  ||||||||    
T  33988332 -tttgtcttaatatgtgtgatttgagcaaa 33988360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 581
Target Start/End: Original strand, 598 - 742
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | ||||||| |||||||||  ||||||||||||||    
T  598 caattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataa-gacactcaaaaccaattttctctctttttcacttatacac 696  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 581  Q
    ||||||||||||| ||| |||||| | ||  | |||||||||||||    
T  697 tttttcttaataattgtaaaatgaaccaagagctcagttaaaatgg 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 437 - 583
Target Start/End: Complemental strand, 10864 - 10717
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca-c 535  Q
    ||||||| ||||| ||||||| ||||||| ||||||| |||  ||||||||||||||| | || | ||| ||||||||||||| |||||||||| |||      
T  10864 aattcaatatattttactttgcatttatgataaagaagaatgaaccaatagttgataaggacactcaaacccatttttctctctctttcacttacacatt 10765  T
Q  536 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 583  Q
    ||||||||||||| |||||||||||| || |  |||||||||||||||    
T  10764 tttttcttaataactgtgaaatgagccaatgactcagttaaaatggga 10717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 470 - 594
Target Start/End: Complemental strand, 7960 - 7838
Alignment:
Q  470 agaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggtt 569  Q
    |||||||| ||||||||||||||||||||| | ||||  |||||||||||  ||||| ||||||| ||||||||||||| |||||||||||  || || |    
T  7960 agaaaaatgcaccaatagttgataaaggcactcaaaataatttttctctc--tttcatttatacattttttcttaataaatgtgaaatgagtcaagggct 7863  T
Q  570 cagttaaaatgggagggaggaagta 594  Q
    || ||||||| ||| ||||| ||||    
T  7862 caattaaaataggacggagggagta 7838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 437 - 561
Target Start/End: Complemental strand, 12509 - 12385
Alignment:
Q  437 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 536  Q
    ||||||| ||||||||||||  ||||||  ||||||| ||| ||| |||| |||| |||| || | ||||||||| ||| ||| |||||| ||||||  |    
T  12509 aattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaaagacactcaaaaccattattcactctctttcatttatacgtt 12410  T
Q  537 ttttcttaataagtgtgaaatgagc 561  Q
    ||||||||||| |||||||||||||    
T  12409 ttttcttaatacgtgtgaaatgagc 12385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 576
Target Start/End: Original strand, 98923 - 98997
Alignment:
Q  501 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 576  Q
    |||||| |||||||||||| | |||| ||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  98923 ttaaaatcatttttctctctcattcatttataca-tttttcttaatatgtgtgaaatgaacaaatggttcagttaa 98997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 559
Target Start/End: Complemental strand, 352536 - 352415
Alignment:
Q  435 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 534  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || | |||| || | ||||  ||||||||||  |||| | |||||||    
T  352536 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaattatttttctct--cttttatttataca 352439  T
Q  535 ctttttcttaataagtgtgaaatga 559  Q
    | ||||||||||  |||||||||||    
T  352438 c-ttttcttaatctgtgtgaaatga 352415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 511 - 557
Target Start/End: Original strand, 4438 - 4484
Alignment:
Q  511 ttttctctccctttcacttatacactttttcttaataagtgtgaaat 557  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  4438 ttttctctctcttttacttatacacattttcttaatatgtgtgaaat 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 9618 - 9503
Alignment:
Q  444 catattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctt 543  Q
    ||||||| |||||| ||||||| ||| | | ||||||  |||| || | ||  ||| ||||||||||||||||||| | |||| ||||||  ||||||||    
T  9618 catattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccatttttctctctccttcatttatactttttttctt 9519  T
Q  544 aataagtgtgaaatgagc 561  Q
    ||||  ||||||||||||    
T  9518 aata--tgtgaaatgagc 9503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 436 - 557
Target Start/End: Original strand, 5851 - 5969
Alignment:
Q  436 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 535  Q
    |||||||| ||||||||||||  ||||||| ||||||  ||| || ||||| ||||||||| || | || | |||||||||||  |||| | ||||||||    
T  5851 caattcaatatattctactttacatttatgataaagagcaatgcatcaatacttgataaagacactcaagatcatttttctct--cttttatttatacac 5948  T
Q  536 tttttcttaataagtgtgaaat 557  Q
     ||||||||||  |||||||||    
T  5949 -ttttcttaatttgtgtgaaat 5969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 458 - 524
Target Start/End: Original strand, 158068 - 158134
Alignment:
Q  458 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctcccttt 524  Q
    ||||||||  |||||| || ||| ||||||||||||| | |||| ||||||||||||||||| ||||    
T  158068 tatttatgacaaagaagaaaacatcaatagttgataaggacattcaaaaccatttttctctctcttt 158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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