View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21270_low_11 (Length: 240)
Name: NF21270_low_11
Description: NF21270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21270_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 44560831 - 44561041
Alignment:
| Q |
1 |
cagcctacatcttcaaacgctctctagagcaccgcttttcttctcatcttgagacaacattgaaatcgccaacaagcatccactggtcttgcatacttcc |
100 |
Q |
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| T |
44560831 |
cagcctacatcttcaaacgctctctagagcaccgcctttcttctcatcttgagacaacattgaaatcgccaacaagcatccactggtcttgcatacttcc |
44560930 |
T |
|
| Q |
101 |
aacaatgtttctgaggtctcccctccactggactaccataaattgccgtaagaaacaaaactcgtcttccatgaaaaactacagaaaatcttttataaag |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
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| T |
44560931 |
aacaatgtttctgaggtcccccctccactggactaccataaattgccgtaagaaacaaaactcgtcttccatgaaaaactacggaaaatcttctataaag |
44561030 |
T |
|
| Q |
201 |
caagaattatc |
211 |
Q |
| |
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||||||||||| |
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| T |
44561031 |
caagaattatc |
44561041 |
T |
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