View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21270_low_2 (Length: 814)

Name: NF21270_low_2
Description: NF21270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21270_low_2
NF21270_low_2
[»] chr3 (39 HSPs)
chr3 (438-784)||(24618637-24618983)
chr3 (49-266)||(24619325-24619542)
chr3 (265-417)||(24619051-24619203)
chr3 (413-580)||(1923117-1923278)
chr3 (419-577)||(46194123-46194280)
chr3 (413-543)||(1334732-1334861)
chr3 (412-577)||(38600723-38600887)
chr3 (414-549)||(44218979-44219112)
chr3 (442-565)||(36790750-36790872)
chr3 (413-539)||(48409611-48409738)
chr3 (420-577)||(51164986-51165142)
chr3 (486-577)||(30261420-30261509)
chr3 (419-526)||(41287295-41287402)
chr3 (450-577)||(26479785-26479918)
chr3 (486-539)||(9218244-9218297)
chr3 (414-539)||(21296458-21296582)
chr3 (412-544)||(9017827-9017958)
chr3 (485-577)||(17776911-17777002)
chr3 (485-577)||(19078212-19078303)
chr3 (419-539)||(39329705-39329824)
chr3 (484-547)||(2868672-2868734)
chr3 (420-522)||(54021429-54021531)
chr3 (414-542)||(54122176-54122303)
chr3 (497-571)||(39144770-39144845)
chr3 (418-541)||(53051058-53051180)
chr3 (420-523)||(53754034-53754137)
chr3 (419-577)||(5245445-5245602)
chr3 (499-577)||(36315651-36315729)
chr3 (433-523)||(38524263-38524352)
chr3 (419-560)||(32977724-32977864)
chr3 (520-577)||(38215761-38215818)
chr3 (413-577)||(21585327-21585490)
chr3 (412-539)||(42547061-42547187)
chr3 (484-547)||(51636843-51636905)
chr3 (522-560)||(26832197-26832235)
chr3 (509-571)||(34081017-34081079)
chr3 (458-543)||(39866504-39866588)
chr3 (414-539)||(43639471-43639595)
chr3 (504-549)||(47684858-47684903)
[»] chr1 (71 HSPs)
chr1 (615-814)||(29051806-29052005)
chr1 (413-579)||(29756057-29756223)
chr1 (412-577)||(26583754-26583919)
chr1 (413-542)||(37541065-37541194)
chr1 (413-577)||(24131318-24131481)
chr1 (419-577)||(26924037-26924195)
chr1 (265-345)||(29051305-29051385)
chr1 (434-577)||(3160604-3160747)
chr1 (160-260)||(29051074-29051174)
chr1 (419-572)||(46363332-46363486)
chr1 (428-578)||(50926789-50926939)
chr1 (419-543)||(5503453-5503575)
chr1 (413-577)||(29225322-29225489)
chr1 (419-544)||(37925192-37925321)
chr1 (419-572)||(40754336-40754488)
chr1 (428-544)||(16956585-16956701)
chr1 (419-577)||(34813950-34814107)
chr1 (419-577)||(27932746-27932908)
chr1 (413-577)||(4466072-4466235)
chr1 (491-571)||(26760381-26760461)
chr1 (413-547)||(16040104-16040237)
chr1 (419-516)||(31798451-31798546)
chr1 (419-566)||(3718779-3718924)
chr1 (414-577)||(11425787-11425949)
chr1 (443-572)||(14090697-14090822)
chr1 (416-522)||(36232761-36232867)
chr1 (497-577)||(2886323-2886403)
chr1 (419-543)||(10587533-10587656)
chr1 (420-563)||(25983565-25983702)
chr1 (419-541)||(27209921-27210042)
chr1 (419-540)||(705303-705424)
chr1 (442-578)||(36326122-36326257)
chr1 (414-577)||(2219366-2219528)
chr1 (423-542)||(13409730-13409849)
chr1 (442-541)||(28706577-28706675)
chr1 (412-559)||(32348244-32348390)
chr1 (413-522)||(14352593-14352705)
chr1 (484-541)||(4659529-4659585)
chr1 (418-522)||(37495861-37495963)
chr1 (419-547)||(27391380-27391507)
chr1 (493-549)||(34332217-34332272)
chr1 (419-539)||(40061842-40061961)
chr1 (486-542)||(40988450-40988506)
chr1 (484-544)||(49494114-49494173)
chr1 (435-547)||(49944981-49945092)
chr1 (418-542)||(50267391-50267514)
chr1 (418-522)||(51049540-51049643)
chr1 (486-549)||(7224500-7224563)
chr1 (576-615)||(29051382-29051421)
chr1 (412-577)||(29225779-29225942)
chr1 (419-502)||(33149306-33149389)
chr1 (428-544)||(44580558-44580676)
chr1 (420-530)||(45889212-45889322)
chr1 (441-542)||(50773301-50773399)
chr1 (419-477)||(2886204-2886262)
chr1 (420-542)||(21304760-21304880)
chr1 (428-522)||(9590554-9590650)
chr1 (458-547)||(40019831-40019919)
chr1 (419-543)||(32587798-32587921)
chr1 (484-544)||(36467146-36467205)
chr1 (412-547)||(28839365-28839499)
chr1 (485-547)||(5040523-5040584)
chr1 (484-542)||(5442438-5442495)
chr1 (481-543)||(6787342-6787403)
chr1 (418-520)||(12267605-12267707)
chr1 (486-547)||(25418743-25418802)
chr1 (492-549)||(39420692-39420750)
chr1 (494-539)||(2571469-2571514)
chr1 (505-550)||(18186142-18186187)
chr1 (412-540)||(27831872-27831997)
chr1 (480-544)||(37525134-37525195)
[»] chr8 (47 HSPs)
chr8 (615-814)||(1354819-1355017)
chr8 (615-814)||(1344545-1344744)
chr8 (413-577)||(14689987-14690151)
chr8 (419-566)||(8394180-8394329)
chr8 (419-577)||(33743809-33743967)
chr8 (419-577)||(14748620-14748780)
chr8 (442-577)||(32231302-32231437)
chr8 (421-544)||(45420888-45421011)
chr8 (428-544)||(1494197-1494313)
chr8 (419-559)||(25174519-25174659)
chr8 (413-559)||(5392076-5392221)
chr8 (419-544)||(886397-886522)
chr8 (413-566)||(8566041-8566191)
chr8 (76-199)||(1344916-1345037)
chr8 (412-539)||(2195494-2195620)
chr8 (419-566)||(39998196-39998342)
chr8 (412-547)||(42412330-42412464)
chr8 (628-705)||(10043378-10043455)
chr8 (420-541)||(29638335-29638455)
chr8 (414-522)||(14117490-14117598)
chr8 (419-577)||(29451382-29451540)
chr8 (418-541)||(28791340-28791462)
chr8 (420-539)||(40077705-40077823)
chr8 (419-548)||(27868271-27868399)
chr8 (418-571)||(27973609-27973761)
chr8 (418-571)||(28030878-28031030)
chr8 (428-543)||(9734119-9734232)
chr8 (486-577)||(2797139-2797230)
chr8 (412-547)||(7258314-7258448)
chr8 (504-574)||(8840445-8840514)
chr8 (420-538)||(15559086-15559203)
chr8 (413-567)||(37459377-37459521)
chr8 (418-582)||(41726553-41726714)
chr8 (486-577)||(36011909-36012001)
chr8 (274-321)||(1354159-1354206)
chr8 (471-549)||(325028-325105)
chr8 (418-544)||(29615830-29615955)
chr8 (418-516)||(41759607-41759705)
chr8 (488-577)||(2875005-2875094)
chr8 (419-536)||(5423122-5423238)
chr8 (428-540)||(26677115-26677227)
chr8 (419-543)||(139055-139178)
chr8 (419-554)||(11637173-11637308)
chr8 (484-547)||(37703085-37703147)
chr8 (419-522)||(5878196-5878300)
chr8 (462-544)||(12653763-12653844)
chr8 (419-537)||(28802800-28802917)
[»] chr4 (49 HSPs)
chr4 (413-577)||(28330821-28330985)
chr4 (418-566)||(8759811-8759959)
chr4 (413-577)||(20964204-20964368)
chr4 (413-577)||(37315838-37316002)
chr4 (419-540)||(38319944-38320065)
chr4 (419-566)||(32949775-32949923)
chr4 (413-543)||(42132840-42132972)
chr4 (419-544)||(49218732-49218856)
chr4 (419-563)||(53848679-53848823)
chr4 (419-543)||(48400582-48400705)
chr4 (419-543)||(22020462-22020584)
chr4 (416-577)||(25902378-25902539)
chr4 (486-577)||(5499349-5499440)
chr4 (458-577)||(54217441-54217562)
chr4 (419-577)||(22872303-22872462)
chr4 (413-522)||(42051627-42051736)
chr4 (492-563)||(18872585-18872656)
chr4 (419-550)||(47277625-47277756)
chr4 (419-559)||(4360343-4360482)
chr4 (477-577)||(41594764-41594864)
chr4 (412-559)||(33047518-33047664)
chr4 (419-542)||(34790903-34791026)
chr4 (419-560)||(39052835-39052975)
chr4 (415-579)||(28279866-28280029)
chr4 (419-539)||(41436514-41436633)
chr4 (495-571)||(46958828-46958904)
chr4 (484-559)||(8295127-8295201)
chr4 (418-541)||(29550680-29550802)
chr4 (412-547)||(41203763-41203897)
chr4 (505-550)||(36045994-36046039)
chr4 (419-547)||(49448874-49448999)
chr4 (486-542)||(13529961-13530017)
chr4 (412-559)||(42024136-42024282)
chr4 (419-477)||(36047116-36047174)
chr4 (514-571)||(11583647-11583704)
chr4 (412-547)||(40020892-40021029)
chr4 (491-547)||(12619792-12619847)
chr4 (419-547)||(17237076-17237203)
chr4 (419-547)||(38160099-38160226)
chr4 (418-469)||(10099749-10099800)
chr4 (412-571)||(35027420-35027578)
chr4 (419-522)||(35998088-35998191)
chr4 (412-547)||(41710091-41710225)
chr4 (504-542)||(1920846-1920884)
chr4 (414-539)||(25149479-25149604)
chr4 (419-540)||(54729434-54729558)
chr4 (422-523)||(13719811-13719912)
chr4 (420-517)||(49306621-49306718)
chr4 (416-529)||(49401686-49401798)
[»] chr2 (48 HSPs)
chr2 (413-577)||(13222095-13222259)
chr2 (414-577)||(314455-314618)
chr2 (419-572)||(6972462-6972614)
chr2 (419-577)||(4282934-4283093)
chr2 (428-566)||(928466-928603)
chr2 (419-543)||(2048325-2048448)
chr2 (412-543)||(43950399-43950529)
chr2 (418-543)||(9724910-9725034)
chr2 (413-584)||(37528981-37529151)
chr2 (413-547)||(2427387-2427521)
chr2 (413-548)||(38872867-38873000)
chr2 (419-566)||(7213508-7213654)
chr2 (412-575)||(43427005-43427167)
chr2 (418-541)||(24356143-24356265)
chr2 (497-559)||(5425969-5426031)
chr2 (419-549)||(10069530-10069659)
chr2 (431-542)||(38280148-38280258)
chr2 (418-539)||(18181168-18181288)
chr2 (420-507)||(31348545-31348632)
chr2 (418-580)||(39166606-39166771)
chr2 (480-547)||(45464162-45464228)
chr2 (413-515)||(1908472-1908574)
chr2 (419-541)||(18460521-18460642)
chr2 (419-541)||(36748181-36748302)
chr2 (413-540)||(3199925-3200049)
chr2 (471-548)||(14384057-14384133)
chr2 (419-539)||(31592583-31592703)
chr2 (419-559)||(9472455-9472594)
chr2 (484-547)||(32556270-32556330)
chr2 (412-542)||(2756700-2756829)
chr2 (484-566)||(6213778-6213859)
chr2 (442-542)||(14890373-14890470)
chr2 (487-547)||(883100-883159)
chr2 (484-543)||(8550593-8550651)
chr2 (431-550)||(12949908-12950026)
chr2 (484-547)||(28527062-28527124)
chr2 (484-543)||(40965112-40965170)
chr2 (484-547)||(44736964-44737026)
chr2 (428-542)||(3123688-3123801)
chr2 (494-540)||(5007194-5007240)
chr2 (456-542)||(43077678-43077763)
chr2 (504-554)||(44024825-44024875)
chr2 (419-517)||(44424241-44424337)
chr2 (484-544)||(435026-435087)
chr2 (481-577)||(10394202-10394295)
chr2 (519-560)||(14306031-14306072)
chr2 (484-549)||(39159717-39159780)
chr2 (484-549)||(39209414-39209477)
[»] chr6 (20 HSPs)
chr6 (413-566)||(15371791-15371943)
chr6 (419-577)||(15325180-15325337)
chr6 (419-566)||(15321153-15321299)
chr6 (419-564)||(15355608-15355752)
chr6 (419-577)||(34803621-34803781)
chr6 (418-577)||(33921386-33921544)
chr6 (419-566)||(15351311-15351457)
chr6 (421-523)||(3166078-3166180)
chr6 (412-564)||(31075854-31076005)
chr6 (420-523)||(3874020-3874123)
chr6 (413-544)||(4552936-4553059)
chr6 (493-577)||(16126318-16126402)
chr6 (414-542)||(3604552-3604679)
chr6 (484-544)||(15081521-15081580)
chr6 (480-544)||(33109467-33109530)
chr6 (441-528)||(20027637-20027724)
chr6 (481-547)||(7739465-7739530)
chr6 (486-572)||(20383944-20384030)
chr6 (414-540)||(31265807-31265932)
chr6 (413-479)||(33017958-33018024)
[»] chr7 (43 HSPs)
chr7 (413-577)||(32776010-32776174)
chr7 (418-577)||(29996945-29997104)
chr7 (423-573)||(47238254-47238404)
chr7 (413-577)||(37264340-37264502)
chr7 (419-543)||(32971968-32972092)
chr7 (423-543)||(23111039-23111159)
chr7 (419-527)||(10355701-10355809)
chr7 (413-509)||(38589761-38589857)
chr7 (428-563)||(8150001-8150135)
chr7 (418-541)||(45218111-45218233)
chr7 (419-541)||(2849288-2849409)
chr7 (486-572)||(33773965-33774051)
chr7 (419-548)||(43007927-43008057)
chr7 (413-541)||(30659433-30659560)
chr7 (419-542)||(9602894-9603017)
chr7 (419-542)||(9830465-9830588)
chr7 (419-577)||(34064248-34064405)
chr7 (435-548)||(6697130-6697242)
chr7 (428-544)||(21446478-21446594)
chr7 (487-566)||(39143601-39143680)
chr7 (462-584)||(27621913-27622035)
chr7 (419-529)||(36070138-36070247)
chr7 (486-542)||(9658937-9658993)
chr7 (484-559)||(11616660-11616733)
chr7 (413-497)||(18731466-18731550)
chr7 (463-547)||(45890805-45890888)
chr7 (420-522)||(39343644-39343744)
chr7 (477-542)||(5724660-5724724)
chr7 (414-542)||(7425829-7425957)
chr7 (465-549)||(36194599-36194684)
chr7 (419-539)||(3667832-3667951)
chr7 (646-702)||(13590862-13590918)
chr7 (709-800)||(13590644-13590735)
chr7 (419-502)||(24288456-24288539)
chr7 (412-547)||(29257573-29257707)
chr7 (419-542)||(37490570-37490692)
chr7 (481-549)||(39498768-39498838)
chr7 (484-559)||(44604413-44604487)
chr7 (497-535)||(37496354-37496392)
chr7 (484-541)||(23058916-23058972)
chr7 (519-560)||(31549556-31549597)
chr7 (412-517)||(33584589-33584694)
chr7 (487-544)||(49100453-49100509)
[»] chr5 (40 HSPs)
chr5 (420-577)||(5147413-5147570)
chr5 (419-577)||(38978937-38979095)
chr5 (413-560)||(13016298-13016444)
chr5 (419-577)||(15564810-15564963)
chr5 (419-560)||(13087676-13087816)
chr5 (413-579)||(5357733-5357898)
chr5 (421-543)||(42818938-42819060)
chr5 (429-565)||(4194975-4195112)
chr5 (419-564)||(31090337-31090482)
chr5 (414-577)||(16926006-16926171)
chr5 (413-577)||(39060340-39060503)
chr5 (413-566)||(25111078-25111229)
chr5 (413-566)||(25170169-25170320)
chr5 (419-579)||(31196352-31196512)
chr5 (412-543)||(11099429-11099559)
chr5 (413-566)||(25108600-25108751)
chr5 (413-566)||(25167692-25167843)
chr5 (420-577)||(39060868-39061028)
chr5 (419-516)||(15898224-15898321)
chr5 (417-478)||(7871344-7871405)
chr5 (413-561)||(35988661-35988808)
chr5 (414-542)||(42575591-42575718)
chr5 (418-540)||(4044433-4044553)
chr5 (419-549)||(6172926-6173055)
chr5 (420-549)||(7311128-7311254)
chr5 (413-541)||(36006849-36006973)
chr5 (499-572)||(6629318-6629391)
chr5 (423-577)||(35666922-35667073)
chr5 (519-577)||(22983076-22983134)
chr5 (504-577)||(792095-792168)
chr5 (463-547)||(41594795-41594878)
chr5 (484-547)||(858433-858495)
chr5 (484-543)||(3725284-3725342)
chr5 (514-577)||(15898605-15898668)
chr5 (492-543)||(25344692-25344742)
chr5 (492-531)||(35012812-35012851)
chr5 (428-523)||(35968762-35968857)
chr5 (484-547)||(42211427-42211489)
chr5 (499-549)||(39212500-39212550)
chr5 (418-547)||(33988232-33988360)
[»] scaffold0576 (1 HSPs)
scaffold0576 (419-564)||(598-742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (420-566)||(10717-10864)
[»] scaffold0155 (1 HSPs)
scaffold0155 (453-577)||(7838-7960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (420-544)||(12385-12509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (484-559)||(98923-98997)
[»] scaffold0003 (1 HSPs)
scaffold0003 (418-542)||(352415-352536)
[»] scaffold0578 (1 HSPs)
scaffold0578 (494-540)||(4438-4484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (427-544)||(9503-9618)
[»] scaffold0086 (1 HSPs)
scaffold0086 (419-540)||(5851-5969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (441-507)||(158068-158134)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 438 - 784
Target Start/End: Complemental strand, 24618983 - 24618637
Alignment:
Q  438 ttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtga 537  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24618983 ttgtatttatgctaaagaagaatacaccactagttgataaaggcacttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtga 24618884  T
Q  538 aatgagcaaaaggttcagttaaaatgggagggaggaagtacttttttgggcaattaaacgttttaggacttgaatatttgagaggacaccctaaatctaa 637  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24618883 aacgagcaaaaggttcagttaaaatgggagggagaaagtacttttttgggcaattaaacgttataggacttgaatatttgagaggacaccctaaatctaa 24618784  T
Q  638 agcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaattatgaattttctaattacctctg 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||     
T  24618783 agcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatcagaaacaaagtgactactaattatgaattttctaattacctcta 24618684  T
Q  738 gaaaactttgtaaatttgagaattattaacattgagaaaccgaaaag 784  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24618683 gaaaactttgtaaatttgagaattattaacattgagaaaccgaaaag 24618637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 24619542 - 24619325
Alignment:
Q  49 atgattttttcgactaggtttcaactcggattctcttaaacgatggaagggcaaaagtgaaataaattatcccaatattatctaaattgaatattacact 148  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||    
T  24619542 atgattttttcgactaggttttaattcggattctcttaaacgatggaagggcaaaagtgaaataaatgatcccaatattatctaaattgaatactccact 24619443  T
Q  149 aaaatcaaccaaaaagtcaaaataaataaaagtatgaatttgaactaagaactggttacatctacagcaatcagtcaatggctaaagtttcttcatgtga 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  24619442 aaaatcaaccaaaaagtcaagataaataaaagtatgaatttgaactaagaactggttacatctagagcaatcaatcaatggctaaagtttcttcatgtga 24619343  T
Q  249 aactaaaataatgaacta 266  Q
    ||||||||||||||||||    
T  24619342 aactaaaataatgaacta 24619325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 24619203 - 24619051
Alignment:
Q  265 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtactccctccgtctcatactaac 364  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24619203 tattaggaacagagcaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtactccctccgtctcatactaac 24619104  T
Q  365 cgagtcatttgcnnnnnnnnntattgtcataaaataattgatccatttcactt 417  Q
     |||||||||||         |||||||  |||||||||||||||||||||||    
T  24619103 tgagtcatttgcaaaaaacaatattgtcgcaaaataattgatccatttcactt 24619051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 1923117 - 1923278
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| |||||| ||||||||| ||||    |||||||||||||||   ||||||||    
T  1923117 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaacagttgataagggcac---aaaccatttttctctt--tttcactt 1923211  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactt 580  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||||| ||||| |||||||    
T  1923212 atacactttttcttaataagtgtgaaatgagc-aagggctcagttaaaatgggacggagggagtactt 1923278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 46194280 - 46194123
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| |||||| || | |||||| ||||||||| |||| | ||| ||||||||||||| |||| ||||||||||    
T  46194280 caattcaatatattctactttgcatttatgataaagagaa-tgcaccaacagttgataagggcactcaaacccatttttctctctctttaacttatacac 46194182  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||| ||  || || ||||||||| ||||| ||||| ||||    
T  46194181 tttttcttaataagtgtgaaattagtcaagggctcagttaaattgggacggagggagta 46194123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 543
Target Start/End: Complemental strand, 1334861 - 1334732
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||||||||| ||||  ||||||||||| |||||| ||    
T  1334861 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaggcattcaaaattatttttctctctctttcattt 1334762  T
Q  513 atacactttttcttaataagtgtgaaatgag 543  Q
    |||| | ||||||||||  ||||||||||||    
T  1334761 atacgc-ttttcttaatctgtgtgaaatgag 1334732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 577
Target Start/End: Complemental strand, 38600887 - 38600723
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||| ||||| ||||| ||||||  ||||||| ||||||| ||| |||||||| |||||||||| | | |||| ||||||||||||  ||||| |    
T  38600887 tcactcccagttcaatatattatactttacatttatggtaaagaagaatgcaccaatacttgataaagggactcaaaatcatttttctctctttttcatt 38600788  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||| ||||||||||  ||| |||||||| ||| ||| || ||||| ||||| ||||| ||||    
T  38600787 tatacac-ttttcttaatctgtgcgaaatgagaaaatggtccaattaaactgggatggagggagta 38600723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 414 - 549
Target Start/End: Complemental strand, 44219112 - 44218979
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| ||||||||||||||||||||| ||| |   ||| |||||| | ||    ||| || | ||||||||||||||||  |||| |||||    
T  44219112 acttccaattcaatatattctactttgtatttatgataatggggaatgcaccaacacttac--aagacactcaaaaccatttttctctttctttgactta 44219015  T
Q  514 tacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||||||||||||||| ||||||||||| ||||||    
T  44219014 tacactttttcttaatatgtgtgaaatgaacaaaag 44218979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 36790872 - 36790750
Alignment:
Q  442 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| ||||||| ||||||||||||||||||||  ||  | |||  |||||||||||| |||||||||||||| ||||| ||||||| ||| |||||    
T  36790872 atttatgataaagaagaatacaccaatagttgataagtgcgctcaaactcatttttctctctctttcacttatacaattttttttaataaatgtaaaatg 36790773  T
Q  542 agcaaaaggttcagttaaaatggg 565  Q
    ||   |||| ||||||||||||||    
T  36790772 ag-tcaaggctcagttaaaatggg 36790750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 413 - 539
Target Start/End: Original strand, 48409611 - 48409738
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaacca--tttttctctccctttcac 510  Q
    |||| ||||||||||||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| || | ||||| |  ||| |||||| ||||||     
T  48409611 cactcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaatctttctctctctctttcat 48409710  T
Q  511 ttatacactttttcttaataagtgtgaaa 539  Q
    ||||||| |||||||||||| ||||||||    
T  48409711 ttataca-tttttcttaatatgtgtgaaa 48409738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 420 - 577
Target Start/End: Original strand, 51164986 - 51165142
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||||||| || | ||||  ||||||||||| |||| | ||||||||     
T  51164986 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaaattatttttctctctcttttatttatacac- 51165084  T
Q  520 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||  ||||||||| || ||| || ||| ||||| | ||| ||||| ||||    
T  51165085 ttttcttaatttgtgtgaaatcagaaaatggctcaattaaactcggacggagggagta 51165142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 486 - 577
Target Start/End: Complemental strand, 30261509 - 30261420
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||| ||||||||||| ||||||||||  |||| |||||||||| | ||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  30261509 aaaactatttttctctctctttcactta--cactctttcttaatatgcgtgaaatgaacaaaaggctcagttaaaatgggacggagggagta 30261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 419 - 526
Target Start/End: Original strand, 41287295 - 41287402
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||  | | ||||||||||||||||| ||||||||||||||     
T  41287295 caattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaaagatagtcaaaaccatttttctctctctttcacttatacat 41287394  T
Q  519 tttttctt 526  Q
     |||||||    
T  41287395 gttttctt 41287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 450 - 577
Target Start/End: Complemental strand, 26479918 - 26479785
Alignment:
Q  450 taaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcac------ttatacactttttcttaataagtgtgaaatgag 543  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||| | |||||| ||  |||      ||||| ||||||||||||||||||||||||||     
T  26479918 taaagaagaatgcaccaatagttgataaatgcattcaaaaccatctctctctctctcacacacacacttatatactttttcttaataagtgtgaaatgaa 26479819  T
Q  544 caaaaggttcagttaaaatgggagggaggaagta 577  Q
    | || || |||||||||||| |  ||||||||||    
T  26479818 ccaagggctcagttaaaatgaggcggaggaagta 26479785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 9218244 - 9218297
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaa 539  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  9218244 aaaactatttttctctctctttcacttatacactttttcttaatatgtgtgaaa 9218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 414 - 539
Target Start/End: Complemental strand, 21296582 - 21296458
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||| |||||||| || | ||  |||||||||| |||||| ||||| | |||| |||    
T  21296582 acttccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcattttcctctctccttcattta 21296483  T
Q  514 tacactttttcttaataagtgtgaaa 539  Q
    |||| ||| ||||| || ||||||||    
T  21296482 taca-tttgtcttagtatgtgtgaaa 21296458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 412 - 544
Target Start/End: Original strand, 9017827 - 9017958
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||||||||||||| |||||  |||||| ||||||  ||  | | ||| |||||||| || | ||| ||| ||||||| ||||||||||| |||||| |    
T  9017827 tcacttccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatt 9017926  T
Q  512 tatacactttttcttaataagtgtgaaatgagc 544  Q
    |||||| ||||| |||||| |||||||||||||    
T  9017927 tataca-ttttttttaatatgtgtgaaatgagc 9017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 485 - 577
Target Start/End: Complemental strand, 17777002 - 17776911
Alignment:
Q  485 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||| |||||||||||||||| |  ||||||||  ||||| ||||||||||    
T  17777002 taaaaccatttttctctctcattcatttatacatttttt-ttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 17776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 485 - 577
Target Start/End: Complemental strand, 19078303 - 19078212
Alignment:
Q  485 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||| |||||||||||||||| |  ||||||||  ||||| ||||||||||    
T  19078303 taaaaccatttttctctctcattcatttatacatttttt-ttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 19078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 419 - 539
Target Start/End: Complemental strand, 39329824 - 39329705
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| |||  || ||| |||||||| || | || | |||| ||||| |||| ||| || ||||||||||||||     
T  39329824 caattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa-gacattcaaaactatttatctttctctttcacttatacat 39329726  T
Q  519 tttttcttaataagtgtgaaa 539  Q
    |||||||||||| ||||||||    
T  39329725 tttttcttaatatgtgtgaaa 39329705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 2868672 - 2868734
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||||||||| | |||| ||||||| |||||||||||| ||||||||||||||||    
T  2868672 ttaaaaccatttttctctctccttcatttataca-tttttcttaatatgtgtgaaatgagcaaa 2868734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 522
Target Start/End: Complemental strand, 54021531 - 54021429
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||  ||||||  ||||||| ||| || ||||| ||||||||| || | |||| |||||||||||| |||| | |||||||||    
T  54021531 aattcaatatattctactttacatttataataaagaagaatgcaacaatatttgataaagacactcaaaatcatttttctctctcttttatttatacact 54021432  T
Q  520 ttt 522  Q
    |||    
T  54021431 ttt 54021429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 542
Target Start/End: Complemental strand, 54122303 - 54122176
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| |||||  |||||| ||||||| ||  | | ||| |||||||| || | |||  |||||||||| ||||||||||| | |||| |||    
T  54122303 acttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcattta 54122204  T
Q  514 tacactttttcttaataagtgtgaaatga 542  Q
    |||| ||| |||||||| |||||||||||    
T  54122203 taca-tttgtcttaatatgtgtgaaatga 54122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 497 - 571
Target Start/End: Original strand, 39144770 - 39144845
Alignment:
Q  497 tctctccctttcacttatacactttt-tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||| ||||||| ||| ||| ||||||| ||||    
T  39144770 tctctctctttcacttatacatttttttcttaatatgtgtgaaatgaacaaaaggctcacttataatgggatggag 39144845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 418 - 541
Target Start/End: Original strand, 53051058 - 53051180
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||| ||||||  ||||||| |||| || ||| ||| |||| |||| ||||||| | ||||| ||||||||||| ||||   |||||||    
T  53051058 ccaattcaatatattatactttacatttatgataaacaagaatgcacaaatacttgaaaaaggcactcaaaactatttttctctctctttactttataca 53051157  T
Q  518 ctttttcttaataagtgtgaaatg 541  Q
    | ||||||||||  ||||||||||    
T  53051158 c-ttttcttaatctgtgtgaaatg 53051180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 420 - 523
Target Start/End: Complemental strand, 53754137 - 53754034
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||   |||| || | |||| ||||||||||||  ||||| |||||||||    
T  53754137 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaatcatttttctctctatttcatttatacact 53754038  T
Q  520 tttt 523  Q
    ||||    
T  53754037 tttt 53754034  T

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Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 5245445 - 5245602
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||||||||||| ||  | | |||||||||||| || | ||  ||| ||||||| ||||||||||| | ||||  ||||||     
T  5245445 caattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctctccttcatgtataca- 5245543  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||| |||||||| || |||  |||||||| || ||||||||  ||||| ||||| ||||    
T  5245544 tttgtcttaatatgtatgatttgagcaaatggctcagttaatctgggacggagggagta 5245602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 36315729 - 36315651
Alignment:
Q  499 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||| |||| |||||||||||||||||||||| ||||| ||||||||||| | | ||||| ||| ||| ||||| ||||    
T  36315729 tctctcttttacttatacactttttcttaatatgtgtggaatgagcaaaaagcttagttataataggacggagggagta 36315651  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 433 - 523
Target Start/End: Complemental strand, 38524352 - 38524263
Alignment:
Q  433 ctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt 523  Q
    |||||||||||||||| | | |||||||||| ||||| ||||||||  |||| ||||| |||||||| |  |||||||||||||| |||||    
T  38524352 ctactttgtatttatgatgatgaaaaatacatcaatacttgataaa-acattcaaaactatttttctttttctttcacttatacatttttt 38524263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 560
Target Start/End: Complemental strand, 32977864 - 32977724
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||  ||  ||||||| ||||||||||| || ||||| |||| ||| ||| | ||||| ||||||||| | ||||   ||||||||    
T  32977864 caattcaatatattctaaattacatttatgataaagaaaaatgcatcaatacttgaaaaatgcactcaaaactatttttctccctctttactttatacac 32977765  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
     ||||||||||  |||||||||||  ||| || |||||||||    
T  32977764 -ttttcttaatccgtgtgaaatgaaaaaatggctcagttaaa 32977724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 38215818 - 38215761
Alignment:
Q  520 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||| |||||||||||||||||||||| |||| ||||| || || ||||||||||    
T  38215818 ttttctttataagtgtgaaatgagcaaaagattcatttaaattgagacggaggaagta 38215761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 21585490 - 21585327
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||| ||| |||||||| |||  ||||||| ||||||| |||  ||||||| || | |||| || | |||| |||||||||||  | ||||||     
T  21585490 cacttccaatacaatatattctattttacatttatgataaagaagaatgaaccaataattaacaaagacactcaaaatcatttttctctgtccttcacta 21585391  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||| | ||||||| ||||| |||| |||||| |||  | ||| ||||| ||||||||||| ||||    
T  21585390 atata-tttttctcaataaatgtggaatgagtaaattgctcaattaaattgggagggagggagta 21585327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 539
Target Start/End: Complemental strand, 42547187 - 42547061
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||||  |||| ||||||| |||  || ||| |||||||| || | || | |||| ||||| |||||| |||| |||| |||    
T  42547187 tcactcccaattcaatatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaa-gacattcaaaactatttttttctctcttttact 42547089  T
Q  512 tatacactttttcttaataagtgtgaaa 539  Q
    |||| | |||||||||||| ||||||||    
T  42547088 tataaattttttcttaatatgtgtgaaa 42547061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Complemental strand, 51636905 - 51636843
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||||||||| | |||||||| ||| ||||||||||||| | |||||||| ||||    
T  51636905 ttaaaaccatttttctctctccttcacttaaaca-tttttcttaataattatgaaatgaacaaa 51636843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 560
Target Start/End: Original strand, 26832197 - 26832235
Alignment:
Q  522 ttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  26832197 ttcttaataagtgtgaattgagcaaaaggctcagttaaa 26832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 509 - 571
Target Start/End: Complemental strand, 34081079 - 34081017
Alignment:
Q  509 acttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
    |||||||||||||||||||||| |||| |||| | |||||| ||  |||||||||||| ||||    
T  34081079 acttatacactttttcttaatatgtgtaaaataaacaaaagtttgggttaaaatgggatggag 34081017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 39866588 - 39866504
Alignment:
Q  458 aatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 543  Q
    |||||||||||| || | |||  || ||||||| ||||||||||  | |||| ||||||| |||||||||||| ||||||||||||    
T  39866588 aatacaccaatacttaacaaaatcacttaaaactatttttctctttccttcatttataca-tttttcttaatatgtgtgaaatgag 39866504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 539
Target Start/End: Complemental strand, 43639595 - 43639471
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| |||||  |||||| ||||||| ||  | ||||| || ||||| || | ||  ||| ||||||||||||||||||| | |||| |||    
T  43639595 acttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcattta 43639496  T
Q  514 tacactttttcttaataagtgtgaaa 539  Q
    || | ||| |||||||| ||||||||    
T  43639495 tata-tttgtcttaatatgtgtgaaa 43639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 549
Target Start/End: Original strand, 47684858 - 47684903
Alignment:
Q  504 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||||||| ||||| ||||||||||| ||||||||||| ||||||    
T  47684858 ctttcacttgtacaccttttcttaatatgtgtgaaatgaacaaaag 47684903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 615 - 814
Target Start/End: Original strand, 29051806 - 29052005
Alignment:
Q  615 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 714  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29051806 ttgaaaggacacccaaaatctaaagcactttcatgatttcatcaatctggtccttagagaaattaacataacaatgatcagaaacaaagtgactactaat 29051905  T
Q  715 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttcacaatcacaaggaaa 814  Q
    ||||||||||| |||||| | | ||||||||   ||||||||| |||  ||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  29051906 tatgaattttcaaattacatatagaaaacttcacaaatttgagcatttctaacattgagaaaccaaatagtaacacactgacttcacaatcacaaagaaa 29052005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 413 - 579
Target Start/End: Complemental strand, 29756223 - 29756057
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  29756223 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactt 29756124  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 579  Q
    |||||||||||||||||||||||||||||||| || || || |||||||||||| ||||| ||||||    
T  29756123 atacactttttcttaataagtgtgaaatgagccaagggctccgttaaaatgggacggagggagtact 29756057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 412 - 577
Target Start/End: Original strand, 26583754 - 26583919
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||| | |||  |||||||||||| ||||||||    
T  26583754 tcactcccaattcaatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatttttctctctctttcact 26583853  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||| ||||    
T  26583854 tatacactttttcttaataagtgtgaaatgagtcaagggttcagttaaaatgggacggagggagta 26583919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 413 - 542
Target Start/End: Complemental strand, 37541194 - 37541065
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||||||||||  ||||||  ||||||| ||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  37541194 cacttccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttttctctctctttcactt 37541095  T
Q  513 atacactttttcttaataagtgtgaaatga 542  Q
    ||||||||||||||||||||||||||||||    
T  37541094 atacactttttcttaataagtgtgaaatga 37541065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 24131481 - 24131318
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||||| ||| |||| ||||||||||| |||||| ||||||||||||||||  |||||||||    
T  24131481 cactcccaattcaatatattatactttgcatttatgataaagaagaatgcacctatagttgataagggcattcaaaaccatttttctct--ctttcactt 24131384  T
Q  513 atacactttttcttaataagtgtgaaatgag-caaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||| |||||||||||||||||||||||||| |||| |  ||||||||||||||| ||||| ||||    
T  24131383 atacgctttttcttaataagtgtgaaatgagtcaaatgactcagttaaaatgggacggagggagta 24131318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 26924195 - 26924037
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | |||  |||||||||||| ||||||||| |||||    
T  26924195 caattcaatatattatactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaactcatttttctctctctttcacttttacac 26924096  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||||||| ||  | |||||||||| |||| ||||| ||||    
T  26924095 tttttcttaataagtgtgaaatgagccaagagctcagttaaaacgggacggagggagta 26924037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 29051305 - 29051385
Alignment:
Q  265 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtact 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29051305 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattctact 29051385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 434 - 577
Target Start/End: Complemental strand, 3160747 - 3160604
Alignment:
Q  434 tactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagt 533  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||| || |||| | ||| |||||||||| || ||||||||||||||||||||||||||||||    
T  3160747 tactttgcatttatgataaagaataatgcaccaatagttgacaagggcactcaaacccatttttctttctctttcacttatacactttttcttaataagt 3160648  T
Q  534 gtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||  || || ||||||||||||||| ||||| ||||    
T  3160647 gtgaaatgagtcaagggctcagttaaaatgggacggagggagta 3160604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 29051074 - 29051174
Alignment:
Q  160 aaaagtcaaaataaataaaagtatgaatttgaactaagaactggttacatctacagcaatcagtcaatggctaaagtttcttcatgtgaaactaaaataa 259  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  29051074 aaaagccaagataaataaaagtatgaatttgaactaagaagtggttacttctatagcaatcagtcaatggctaaagttttttcatatgaaactaaaataa 29051173  T
Q  260 t 260  Q
    |    
T  29051174 t 29051174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 419 - 572
Target Start/End: Complemental strand, 46363486 - 46363332
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaag-gcatttaaaaccatttttctctccctttcacttataca 517  Q
    |||||||| ||||| ||||||| ||||||| ||||||| ||| |||||||||||||||||| ||| | |||  ||||| |||||| || |||||||||||    
T  46363486 caattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataaagtgcactcaaacacatttctctctctctctcacttataca 46363387  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 572  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||| ||| |||||    
T  46363386 ctttttcttaataagtgtgaaatgagtgaaaggctcaattaaaattggacggagg 46363332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 578
Target Start/End: Original strand, 50926789 - 50926939
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||| ||||| ||||||||||||||||| ||||  |||||||| |||||||||    
T  50926789 atattctactttacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccatttttctctctctttttcttatacaatttttctta 50926888  T
Q  528 ataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtac 578  Q
    |||  ||||||||||| |||| | |||||||||||| || ||||| |||||    
T  50926889 atatatgtgaaatgagaaaaaagctcagttaaaatgagacggagggagtac 50926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 419 - 543
Target Start/End: Original strand, 5503453 - 5503575
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||| ||| ||| ||||||| ||| |||||||||||||||| || |  |||||||||||||||||||  |||| ||||||||    
T  5503453 caattcaatatattatactttgaattaatgataaagaagaatgcaccaatagttgataagggtacctaaaaccatttttctctcc--ttcatttatacac 5503550  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||||||||||||||||    
T  5503551 tttttcttaataagtgtgaaatgag 5503575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 29225489 - 29225322
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||||||||||  ||||||| |||| || ||| |||||||| || | ||||||| | |||| |||||||||| | |||||||||    
T  29225489 cacttccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctcactctttcactt 29225390  T
Q  513 a---tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |   ||||||||||||||||| ||||||||||||||||||  ||| ||| ||||||| ||||| ||||    
T  29225389 atactacactttttcttaatatgtgtgaaatgagcaaaagactcaattataatgggacggagggagta 29225322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 419 - 544
Target Start/End: Complemental strand, 37925321 - 37925192
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttc----tctccctttcacttat 514  Q
    |||||||| ||||||||||||| ||||||| ||||||||||| |||||||| |||||||  ||| | |||| ||||||||    |||| |||||||||||    
T  37925321 caattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattgataagagcactaaaaatcatttttctctctctctctttcacttat 37925222  T
Q  515 acactttttcttaataagtgtgaaatgagc 544  Q
    ||||||||||||||||||||| ||||||||    
T  37925221 acactttttcttaataagtgttaaatgagc 37925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 572
Target Start/End: Complemental strand, 40754488 - 40754336
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatag-ttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||| || ||||||||||||| ||||||| ||||||| ||| ||||||||| ||||||| |||| | |||||||||| ||||||  |||||||||||||    
T  40754488 caatttaatatattctactttgcatttatgataaagaagaatgcaccaataggttgataagggcactcaaaaccatttctctctc--tttcacttataca 40754391  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 572  Q
    |||||||||||||||| |||||||||  ||  | ||||||||| ||||| |||||    
T  40754390 ctttttcttaataagtatgaaatgagtcaagagctcagttaaattgggacggagg 40754336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 544
Target Start/End: Original strand, 16956585 - 16956701
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    |||||||||||| |||||||| |||| || ||| ||| |||| || |||||| || | ||| |||||||||||| |||||||||||||||||||||||||    
T  16956585 atattctactttatatttatgataaataagaatgcacaaatacttaataaagacactcaaacccatttttctcttcctttcacttatacactttttctta 16956684  T
Q  528 ataagtgtgaaatgagc 544  Q
    ||| |||| ||||||||    
T  16956685 atatgtgtcaaatgagc 16956701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 34813950 - 34814107
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||| || |||| ||| |||| || | ||   || ||||||| ||||||||||| | |||||| |||||     
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaataca- 34814048  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||||||||||  |||| ||||| ||||| ||||| ||||    
T  34814049 tttttcttaataagtgtgaaatgagcaaaaaattcacttaaattgggacggagggagta 34814107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 27932908 - 27932746
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||||||||||||| || | || | |||  |||||||||||| |||||||||||| ||    
T  27932908 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaaggacactcaaacgcatttttctctctctttcacttatatac 27932809  T
Q  519 tttttctta----ataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||| ||||    |||| |||||||||||| || |  | ||||||||||||| ||||| ||||    
T  27932808 ttttacttaatatataaatgtgaaatgagccaatgacttagttaaaatgggacggagggagta 27932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 4466235 - 4466072
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | ||||| | | ||| ||||||||||||| | ||||||     
T  4466235 cacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttttctctctcattcacta 4466136  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||| | |||||||||||||||||||||||| |||| || ||| ||||| ||||| ||||| ||||    
T  4466135 atata-tttttcttaataagtgtgaaatgaacaaatggctcaattaaattgggacggagggagta 4466072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 571
Target Start/End: Original strand, 26760381 - 26760461
Alignment:
Q  491 catttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||| || |||||||||||| ||||    
T  26760381 catttttctctctctttcacttatacattttttcttaataagtgtgaaatgagtcaaaggctcggttaaaatgggacggag 26760461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 413 - 547
Target Start/End: Original strand, 16040104 - 16040237
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || ||||||||||||||||||| | || |||     
T  16040104 cacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctctccttgacta 16040203  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||| | ||||||||||||| |||||||||||||||    
T  16040204 atata-tttttcttaataaatgtgaaatgagcaaa 16040237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 419 - 516
Target Start/End: Original strand, 31798451 - 31798546
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 516  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | |||||||| |||||||  |||||||||||||    
T  31798451 caattcaatatattctactttgcatttatgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctct--ctttcacttatac 31798546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 3718924 - 3718779
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||  ||||||| ||| || |||| ||| |||| |||| ||  ||| ||||||| ||||||||||| ||| || | |||||     
T  3718924 caattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctctctt-cattaataca- 3718827  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  3718826 tttttcttaataagtgtgaaatgagcaaaatgttcacttaaattggga 3718779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 414 - 577
Target Start/End: Complemental strand, 11425949 - 11425787
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || | ||||| ||||||||||| | |||||| |    
T  11425949 acttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttttctctctccttcactaa 11425850  T
Q  514 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    || | |||||||||||||  |||||||||||||| || ||| ||||| ||||| ||||| ||||    
T  11425849 tata-tttttcttaataaacgtgaaatgagcaaatggctcaattaaattgggacggagggagta 11425787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 443 - 572
Target Start/End: Original strand, 14090697 - 14090822
Alignment:
Q  443 tttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    |||||| |||| || ||| |||||||||||||||||| || | ||  | |||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  14090697 tttatgataaacaagaatgcaccaatagttgataaagacaatcaa--ctatttttctctc--tttcacttatacattttgtcttaataagtgtgaaatga 14090792  T
Q  543 gcaaaaggttcagttaaaatgggagggagg 572  Q
    || |   ||||||||||||||||| |||||    
T  14090793 gcgaggagttcagttaaaatgggatggagg 14090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 522
Target Start/End: Complemental strand, 36232867 - 36232761
Alignment:
Q  416 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 515  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||| |||||||| |||  |||| || | |||| |||||||||||| |||||  |||||    
T  36232867 ttccaattcaatatattctactttatatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcgtttata 36232768  T
Q  516 cactttt 522  Q
    |||||||    
T  36232767 cactttt 36232761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 2886323 - 2886403
Alignment:
Q  497 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||| || || ||| ||||||||||| | ||||||||    
T  2886323 tctctctctctcacttatacactttttcttaataagtatgaaatgagccaagggctcaattaaaatgggacgaaggaagta 2886403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 543
Target Start/End: Complemental strand, 10587656 - 10587533
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||||| |||| ||||||| ||| ||| |||  | || || ||||||| | || ||||||  ||||||||||  ||||||||||| |||    
T  10587656 caattcaatatattctattttgcatttatgataatgaagaatgtatca-taattgataatgacacttaaaattatttttctctttctttcacttatgcac 10587558  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||||||||||||||||    
T  10587557 tttttcttaataagtgtgaaatgag 10587533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 420 - 563
Target Start/End: Complemental strand, 25983702 - 25983565
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    |||||||||||||||| |||| ||||||| |||| |  ||| |||||||| || |||| | || ||||||| ||||| ||||    ||||||||||||||    
T  25983702 aattcaacatattctattttgcatttatgataaaaatgaatgcaccaatacttaataa-gacacttaaaacaattttactct----ttcacttatacact 25983608  T
Q  520 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 563  Q
    ||||||||||| ||||| ||||| ||||||  ||||||||||||    
T  25983607 ttttcttaatatgtgtg-aatgaacaaaagactcagttaaaatg 25983565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 419 - 541
Target Start/End: Complemental strand, 27210042 - 27209921
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||| ||||  ||||||| ||||||| ||| |||||||| |||  |||| || | |||| |||||||||||| |||||| ||||||||    
T  27210042 caattcaatatattctcctttacatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcatttatacac 27209943  T
Q  519 tttttcttaataagtgtgaaatg 541  Q
     ||||||||||| |||| |||||    
T  27209942 -ttttcttaatatgtgtaaaatg 27209921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 705424 - 705303
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||  || |||| ||||||| ||| ||| |||| || |||||| |||| |||| ||||||||| || |||| |||||||||     
T  705424 caattcaatatattatactttacatctatgataaagaagaatgcactaatacttaataaagacattcaaaatcatttttctttctctttaacttatacat 705325  T
Q  519 tttttcttaataagtgtgaaat 540  Q
    |||||||||||| || ||||||    
T  705324 tttttcttaatatgtatgaaat 705303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 442 - 578
Target Start/End: Complemental strand, 36326257 - 36326122
Alignment:
Q  442 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| |||| || ||| |||||||| |||| |||| || | ||||||||| ||||||| |||||| |||||||| ||||||||||  ||||||||||    
T  36326257 atttatgataaacaagaatgcaccaatatttgacaaagacactcaaaaccattgttctctctctttcatttatacac-ttttcttaatctgtgtgaaatg 36326159  T
Q  542 agcaaaaggttcagttaaaatgggagggaggaagtac 578  Q
      |||  || ||||||||| ||||| ||||| |||||    
T  36326158 ttcaactggctcagttaaactgggatggagggagtac 36326122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 414 - 577
Target Start/End: Complemental strand, 2219528 - 2219366
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||  || |||||| || | |||| |||| ||||||| |||||| |||    
T  2219528 acttccaattcaatatattttactttacatttatgataaagaagaatgcatcaatcttttataaagacactcaaaatcattattctctctctttcattta 2219429  T
Q  514 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||  ||| |||||| ||||||||||||  ||| |||||| ||||  ||||| ||||| ||||    
T  2219428 taca-atttacttaatcagtgtgaaatgaaaaaatggttcaattaatctgggacggagggagta 2219366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 542
Target Start/End: Complemental strand, 13409849 - 13409730
Alignment:
Q  423 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 522  Q
    |||| ||||||||| |  |||||||| ||||||||||| || ||||| || |||||  |   |||||| |||||||||| ||||||||||||| | ||||    
T  13409849 tcaatatattctacctcatatttatgataaagaaaaatgcatcaatacttaataaatactagtaaaactatttttctcttcctttcacttatatattttt 13409750  T
Q  523 tcttaataagtgtgaaatga 542  Q
    ||||||||  ||||||||||    
T  13409749 tcttaatatatgtgaaatga 13409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 541
Target Start/End: Complemental strand, 28706675 - 28706577
Alignment:
Q  442 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| ||||||||||| || ||||| |||| ||||||| | |||||||||||||||||   |||| ||||||| ||||| |||||| ||||||||||    
T  28706675 atttatgataaagaaaaatgcatcaatacttgacaaaggcactcaaaaccatttttctctcttattcatttataca-ttttttttaatatgtgtgaaatg 28706577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 559
Target Start/End: Original strand, 32348244 - 32348390
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| |||||| |||| || ||  | |||||| ||||||| || | ||  ||| ||||||||||||||||||| | |||| |    
T  32348244 tcactcccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctccttcatt 32348343  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||| ||| |||||||| ||||||  |||||||| || ||||||||    
T  32348344 tataca-tttgtcttaatatgtgtgatttgagcaaatggctcagttaa 32348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 522
Target Start/End: Original strand, 14352593 - 14352705
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaacca---tttttctctccctttca 509  Q
    |||| ||||||||| |||||||||||| |||||| | ||||||| ||| |||||||| |||| |||| || | |||||||   ||||||||||  |||||    
T  14352593 cactcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttgacaaagacactcaaaaccattttttttctctctatttca 14352692  T
Q  510 cttatacactttt 522  Q
     ||||||||||||    
T  14352693 tttatacactttt 14352705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 541
Target Start/End: Original strand, 4659529 - 4659585
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| ||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  4659529 ttaaaactatttttctctccccttcactaataca-tttttcttaataagtgtgaaatg 4659585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 418 - 522
Target Start/End: Original strand, 37495861 - 37495963
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||  ||||||| ||| |||||||| ||||||||| |||| |||| ||  ||||||||  ||||| |||||||    
T  37495861 ccaattcaatatattctactttacatttataataaagaagaatgcaccaatacttgataaagacattcaaaatca--tttctctctttttcatttataca 37495958  T
Q  518 ctttt 522  Q
    |||||    
T  37495959 ctttt 37495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 547
Target Start/End: Original strand, 27391380 - 27391507
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||| |||    ||||  ||||||| || ||||  ||| |||||| |||||||||||| | ||||||||||||     
T  27391380 caattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttataca- 27391478  T
Q  519 tttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| ||||||||||||| ||| ||||    
T  27391479 tttttcgtaataagtgtgaattgaacaaa 27391507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 549
Target Start/End: Original strand, 34332217 - 34332272
Alignment:
Q  493 tttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||    
T  34332217 tttttctctctctttcacttataca-tttttcttaatatgtgtgaaatgaacaaaag 34332272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 539
Target Start/End: Original strand, 40061842 - 40061961
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||||| |||| ||||||| ||| |||||||  | ||||| |||||||   ||||||||| ||||||||||||   ||| ||||||||     
T  40061842 caattcaatatattctaatttgcatttatgataatgaaaaatgtaacaatacttgataagaacatttaaaatcatttttctctcttcttcgcttataca- 40061940  T
Q  519 tttttcttaataagtgtgaaa 539  Q
    ||| | |||||||||||||||    
T  40061941 tttcttttaataagtgtgaaa 40061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 40988450 - 40988506
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    |||||||||| |||||| |||||||||||||  |||||||||||| |||||||||||    
T  40988450 aaaaccatttgtctctctctttcacttatactatttttcttaatatgtgtgaaatga 40988506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 49494173 - 49494114
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||| |||||||||||||    
T  49494173 ttaaaactatttttctctctctttcatttataca-tttttcttaatacgtgtgaaatgagc 49494114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 49944981 - 49945092
Alignment:
Q  435 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtg 534  Q
    |||||| ||||||| || |||| ||| ||| |||| || | ||  ||| |||||||||||||||||||   |||| ||||||| |||||||||||| |||    
T  49944981 actttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttataca-tttttcttaatatgtg 49945079  T
Q  535 tgaaatgagcaaa 547  Q
    |||||||||||||    
T  49945080 tgaaatgagcaaa 49945092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 542
Target Start/End: Complemental strand, 50267514 - 50267391
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| |||||  |||||  ||||||| ||| | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| |||||| |||||||    
T  50267514 ccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctcactttcatttataca 50267415  T
Q  518 ctttttcttaataagtgtgaaatga 542  Q
     |||||||||||| |||||||||||    
T  50267414 -tttttcttaatacgtgtgaaatga 50267391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 522
Target Start/End: Original strand, 51049540 - 51049643
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||| ||||||  ||||||| |||| || ||| ||| || | ||||||||| |||| ||||||||||||||||| |||| | |||||||    
T  51049540 ccaattcaatatattatactttacatttatgataaaaaagaatgcactaa-acttgataaagacattcaaaaccatttttctctctcttttatttataca 51049638  T
Q  518 ctttt 522  Q
    |||||    
T  51049639 ctttt 51049643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 7224500 - 7224563
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||||||||||| ||  |||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  7224500 aaaaccatttttcgctttctttcacttatacatttttttttaatatgtgtgaaatgaacaaaag 7224563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 576 - 615
Target Start/End: Original strand, 29051382 - 29051421
Alignment:
Q  576 tacttttttgggcaattaaacgttttaggacttgaatatt 615  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  29051382 tacttttttgggcacttaaacgttttaggacttgaatatt 29051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 412 - 577
Target Start/End: Original strand, 29225779 - 29225942
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttt-tctctccctttcac 510  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||  |  ||| |||||||| |||| || | || | ||| | ||||| |||||| |||||||    
T  29225779 tcactcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgacaa-gacactcaaacctattttctctctctctttcac 29225877  T
Q  511 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    || ||||||||||||||||  |||| |||| | ||||| | |||||||| |||||| ||||| ||||    
T  29225878 ttgtacactttttcttaat--gtgtaaaattaacaaaatgctcagttaacatgggacggagggagta 29225942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 419 - 502
Target Start/End: Original strand, 33149306 - 33149389
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc 502  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||| | || | ||| |||||||||||||    
T  33149306 caattcaatatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactcaaatccatttttctctc 33149389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 428 - 544
Target Start/End: Original strand, 44580558 - 44580676
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt--ct 525  Q
    ||||||||||||| ||||||| |||| |||||| ||| |||||||||||| | || |  || ||||||||||||  ||||||||||||| || |||  ||    
T  44580558 atattctactttgcatttatgataaaaaaaaatgcacaaatagttgataaggtcactctaacccatttttctct--ctttcacttatactctctttcact 44580655  T
Q  526 ta--ataagtgtgaaatgagc 544  Q
    ||  |||||||||||||||||    
T  44580656 taatataagtgtgaaatgagc 44580676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 45889322 - 45889212
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc-cctttcacttatacac 518  Q
    ||||||| |||||| |||||| ||||||| ||| | | |||| |||||||||| | ||  ||| ||||||||||||||||||| ||||||| |||||||     
T  45889322 aattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccatttttctctctcctttcatttataca- 45889224  T
Q  519 tttttcttaata 530  Q
    ||| ||||||||    
T  45889223 tttgtcttaata 45889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 441 - 542
Target Start/End: Complemental strand, 50773399 - 50773301
Alignment:
Q  441 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaat 540  Q
    |||||||| || | || ||||||| ||||||||||||  ||| | ||| |||   ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  50773399 tatttatgatagaaaagaatacactaatagttgataagagcactcaaaccca---ttctctctctttcacttatacacgttttcttaataagtgcgaaat 50773303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 477
Target Start/End: Original strand, 2886204 - 2886262
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa 477  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| | ||||||||||||||    
T  2886204 caattcaatatattctactttgcatttatgataaagaagaatgctccaatagttgataa 2886262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 420 - 542
Target Start/End: Complemental strand, 21304880 - 21304760
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||| |||||| |||||||| ||||||||||| || ||||| |||| |||| || | |||| || |||| |||| |||||| ||||||| |    
T  21304880 aattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaa-caattttatctctctttcatttataca-t 21304783  T
Q  520 ttttcttaataagtgtgaaatga 542  Q
    ||||||||||   ||||||||||    
T  21304782 ttttcttaatttatgtgaaatga 21304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 522
Target Start/End: Original strand, 9590554 - 9590650
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccat--ttttctctccctttcacttatacactttt 522  Q
    |||||||||||| |||||||| |||| || ||| ||| |||| |||| ||||||| ||||||||||  || |||||| |||||| ||||||| ||||    
T  9590554 atattctactttatatttatgataaataataatgcacaaatacttgacaaaggcacttaaaaccattattatctctctctttcatttatacaatttt 9590650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 547
Target Start/End: Original strand, 40019831 - 40019919
Alignment:
Q  458 aatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||| |||| |||| ||  ||| ||||||| ||||||||||| | |||||||||||| ||||||||||| ||||| |||||| ||||    
T  40019831 aatacacaaatacttgacaagagcacttaaaacaatttttctctctcattcacttataca-tttttcttaatcagtgtaaaatgaacaaa 40019919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 543
Target Start/End: Original strand, 32587798 - 32587921
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||  |||||| ||||||| ||| | ||||| || ||||| || | |||  || ||||||  ||||||||||| | |||| |||||||     
T  32587798 caattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcatttataca- 32587896  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||| ||||||||||||    
T  32587897 tttttcttaatatgtgtgaaatgag 32587921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 36467205 - 36467146
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||||    
T  36467205 ttaaaactatttttctctctcattcatttataca-tttttcttaatacgtgtgaaatgagc 36467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 28839365 - 28839499
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | | |||| ||||||| || | ||  ||||||||||| ||||||||||| | |||| |    
T  28839365 tcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatttaaaactatttttctctctccttcatt 28839464  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| ||| ||||||||  |||||  ||||||||    
T  28839465 tataca-tttgtcttaatatatgtgatttgagcaaa 28839499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 5040584 - 5040523
Alignment:
Q  485 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||||||||||| | |||| ||||||| ||| ||| |||| ||||||||||||||||    
T  5040584 taaaaccatttttctctctcattcatttataca-tttgtctaaatatgtgtgaaatgagcaaa 5040523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 484 - 542
Target Start/End: Original strand, 5442438 - 5442495
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    ||||||||||||||||||| | |||| ||||||| ||| |||||||| |||||||||||    
T  5442438 ttaaaaccatttttctctctcattcatttataca-tttgtcttaataggtgtgaaatga 5442495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 6787342 - 6787403
Alignment:
Q  481 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 543  Q
    |||||||||| ||||||||||| |||||  ||||| | |||||||||||| ||||||||||||    
T  6787342 catttaaaactatttttctctctctttcgtttatata-tttttcttaatacgtgtgaaatgag 6787403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 418 - 520
Target Start/End: Complemental strand, 12267707 - 12267605
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||  ||||||| |||| ||| ||| | ||||| |||||||| || ||||   |||||||    
T  12267707 ccaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgaaaaatgcactcaaaactatttttctttctcttttctttataca 12267608  T
Q  518 ctt 520  Q
    |||    
T  12267607 ctt 12267605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 25418743 - 25418802
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||| |||||||||||  ||||||||||| | |||||||||||| || |||||||||||||    
T  25418743 aaaactatttttctctc--tttcacttatataatttttcttaatatgtatgaaatgagcaaa 25418802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 492 - 549
Target Start/End: Original strand, 39420692 - 39420750
Alignment:
Q  492 atttttctctccctttcacttatacac-tttttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||||||||| |||||| |||||||| |||||||||||| | ||||||||| ||||||    
T  39420692 atttttctctctctttcatttatacacttttttcttaatatgcgtgaaatgaacaaaag 39420750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 539
Target Start/End: Original strand, 2571469 - 2571514
Alignment:
Q  494 ttttctctccctttcacttatacactttttcttaataagtgtgaaa 539  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  2571469 ttttctctctctttcatttatacattttttcttaatatgtgtgaaa 2571514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 18186187 - 18186142
Alignment:
Q  505 tttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 550  Q
    ||||||| ||||| |||||||||||| |||||||||||| ||||||    
T  18186187 tttcactcatacaatttttcttaatacgtgtgaaatgagtaaaagg 18186142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 540
Target Start/End: Original strand, 27831872 - 27831997
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| || ||| |||||| ||||||| ||| |   ||| |||||||| |||| || |||| ||||||| ||||||||||  ||||||||    
T  27831872 tcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctct--ctttcact 27831969  T
Q  512 tatacactttttcttaataagtgtgaaat 540  Q
     || ||| |||||||||||  ||||||||    
T  27831970 catgcac-ttttcttaatatttgtgaaat 27831997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 544
Target Start/End: Original strand, 37525134 - 37525195
Alignment:
Q  480 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    ||||||||||| ||||||||||||  |||| ||||||| ||||||||||||  ||||||||||||    
T  37525134 gcatttaaaactatttttctctcc--ttcatttataca-tttttcttaatacatgtgaaatgagc 37525195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 2e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 615 - 814
Target Start/End: Original strand, 1354819 - 1355017
Alignment:
Q  615 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 714  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  1354819 ttgaaaggaaaccctaaatttaaagcagtttcatgatttcatcaatctggtccttagagaaattaacataacaatgatcagaaacaaagtaattactaat 1354918  T
Q  715 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttcacaatcacaaggaaa 814  Q
    ||||||||||| |||||| |||  |||||||   ||||||||| |||  ||||||| ||||||  || ||||||||| ||||||||||||||||||||||    
T  1354919 tatgaattttcaaattacatctaaaaaacttcacaaatttgagcatt-ctaacattaagaaactaaatagtaacacattgacttcacaatcacaaggaaa 1355017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 615 - 814
Target Start/End: Complemental strand, 1344744 - 1344545
Alignment:
Q  615 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 714  Q
    |||| |||| ||||||||| |||||||||||||||  ||||  ||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  1344744 ttgaaaggaaaccctaaatttaaagcagtttcatgccttcactaatctggtccttagagaaattaacataacaatgatcagaaacaaagtgattactaat 1344645  T
Q  715 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttcacaatcacaaggaaa 814  Q
    ||||||||||| |||||| ||| ||  ||||   ||||||||  | | |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  1344644 tatgaattttcaaattacatctagaggacttcaaaaatttgattagttttaacattgagaaaccaaatagtaacacactgacttcacaatcacaaggaaa 1344545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 413 - 577
Target Start/End: Original strand, 14689987 - 14690151
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| | || | ||||||||||||||||| |||||||||    
T  14689987 cactcccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcactt 14690086  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||| ||||| ||||    
T  14690087 atacactttttcttaataagtgtgaaatgagtcaagggctcagttaaaatgggacggagggagta 14690151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 8394329 - 8394180
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctc--tccctttcacttatac 516  Q
    |||||||| ||||| ||||||||||||||| ||||||| ||| ||||||||||||||||  |||||||||  ||||||||||  || |||  ||||||||    
T  8394329 caattcaatatattttactttgtatttatgataaagaataatgcaccaatagttgataagagcatttaaactcatttttctctttctcttatacttatac 8394230  T
Q  517 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  8394229 actttttcttaataagtgtgaaatgagttaagagttcagttaaaatggga 8394180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 33743809 - 33743967
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    ||||| || ||||||||||||||||||||| ||||||| ||| ||| ||||||||||||   || | ||| ||||||||||||| |||||| ||||||||    
T  33743809 caatttaatatattctactttgtatttatgataaagaagaatgcacaaatagttgataagtacactcaaacccatttttctctctctttcatttatacac 33743908  T
Q  519 tttttcttaataagtgtgaaatg-agcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||| ||||| | ||||| |||||||||||  |||||||||    
T  33743909 tttttcttaataagtgtgaaatgaagcaaga-gttcaattaaaatgggatcgaggaagta 33743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 14748780 - 14748620
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccct--ttcacttatac 516  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||  ||| | ||| |||| |||||||| ||  |||||||||||    
T  14748780 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataagagcactcaaacccatatttctctctctctttcacttatac 14748681  T
Q  517 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||| |||||||  || || ||||||||||||||| ||||| ||||    
T  14748680 actttttcttaataagtgtaaaatgagtcaagggctcagttaaaatgggacggagggagta 14748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 442 - 577
Target Start/End: Complemental strand, 32231437 - 32231302
Alignment:
Q  442 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| ||||||| |||||| ||||||||||||| |||| | ||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||    
T  32231437 atttatgataaagaagaatacatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatacattttttcttaataaatgtgaaatg 32231338  T
Q  542 agcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||  || || ||| ||||||||||| ||||| ||||    
T  32231337 agacaagggctcaattaaaatgggacggagggagta 32231302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 421 - 544
Target Start/End: Complemental strand, 45421011 - 45420888
Alignment:
Q  421 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 520  Q
    |||||| ||||| ||||||| ||||||| ||||||| ||| | |||| |||||| || |||| | ||| ||||||||||||| |||||||||||||||||    
T  45421011 attcaatatattttactttgcatttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctctctttcacttatacactt 45420912  T
Q  521 tttcttaataagtgtgaaatgagc 544  Q
    ||||||||||||||||||||||||    
T  45420911 tttcttaataagtgtgaaatgagc 45420888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 544
Target Start/End: Complemental strand, 1494313 - 1494197
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    ||||||||||||| ||||||| ||||||| ||| || ||||| ||||||| |||| | |||| |||||||||| | ||||||| |||||| |||| ||||    
T  1494313 atattctactttgcatttatgataaagaagaatgcatcaataattgataagggcactcaaaatcatttttctcactctttcacatatacatttttcctta 1494214  T
Q  528 ataagtgtgaaatgagc 544  Q
    |||||||||||||||||    
T  1494213 ataagtgtgaaatgagc 1494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 559
Target Start/End: Complemental strand, 25174659 - 25174519
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||  ||||||| ||| ||||||||||| |||| |||| | |||| |||| || |||| |||| |||||||||     
T  25174659 caattcaatatattctactttgcatttataataaagaataatgcaccaatagttaataagggcactcaaaatcattcttttctctcttttacttatacat 25174560  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    ||||||||||||| | |||||||||  ||||| ||||||||    
T  25174559 tttttcttaataaatatgaaatgagtcaaaggctcagttaa 25174519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 559
Target Start/End: Original strand, 5392076 - 5392221
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| |||| ||| ||| ||||||||||||||||||| | |||| ||    
T  5392076 cactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcattt 5392175  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    ||||| ||| |||||||| |||||||||||||||| || ||||||||    
T  5392176 ataca-tttgtcttaataggtgtgaaatgagcaaatggctcagttaa 5392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 544
Target Start/End: Complemental strand, 886522 - 886397
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||| | ||||||||||||| ||||||| ||||||| ||| |||  ||||||||||| | || | |||  |||||  ||||| ||||||||| |||||    
T  886522 caattcgatatattctactttgcatttatgataaagaagaatgcacagatagttgataaggacaatcaaactcatttccctctctctttcacttgtacac 886423  T
Q  519 tttttcttaataagtgtgaaatgagc 544  Q
    ||||||||||||||||||||||||||    
T  886422 tttttcttaataagtgtgaaatgagc 886397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 413 - 566
Target Start/End: Complemental strand, 8566191 - 8566041
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaata--caccaatagttgataaaggcatttaaaaccatttttctctccctttcac 510  Q
    |||||||||||||| ||||||| |     ||||||| |||||||||| |  || ||||||||||||| |||| | |||  |||||||||| | |||||||    
T  8566191 cacttccaattcaatatattctgc-----atttatgataaagaaaaaaatgcatcaatagttgataagggcactcaaacacatttttctccctctttcac 8566097  T
Q  511 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||||| ||||||||||||||||||||||||  || |  |||||||||||||||    
T  8566096 ttatacacgttttcttaataagtgtgaaatgagtcaatgactcagttaaaatggga 8566041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 1345037 - 1344916
Alignment:
Q  76 ggattctcttaaacgatggaagggcaaaagtgaaataaattatcccaatattatctaaattgaatattacactaaaatcaaccaaaaagtcaaaataaat 175  Q
    ||||| |||||| ||||||| ||| ||||||||| ||||  ||||| || |||||||||||||||||| ||||||||| |||| ||||| ||| ||||||    
T  1345037 ggattttcttaatcgatggatgggaaaaagtgaattaaaagatccctatgttatctaaattgaatattccactaaaataaacc-aaaagccaagataaat 1344939  T
Q  176 aaaagtatgaatttgaactaagaa 199  Q
    |||| ||||||||| |||||||||    
T  1344938 aaaaatatgaattt-aactaagaa 1344916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 539
Target Start/End: Original strand, 2195494 - 2195620
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||  || ||| |||||||| || | || | || | ||||| ||||||||||| ||||||||    
T  2195494 tcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa-gacactcaaaactatttttctctctctttcact 2195592  T
Q  512 tatacactttttcttaataagtgtgaaa 539  Q
    ||||||||||||||||||| ||||||||    
T  2195593 tatacactttttcttaatatgtgtgaaa 2195620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 39998196 - 39998342
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| | | |||| ||||||||| || |||||| |||||||||||| |||||| |||||| |    
T  39998196 caattcaatatattctactttacatttatgataaagaagaatgctcaaatacttgataaagacacttaaaatcatttttctctctctttcatttatactc 39998295  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
     ||||||||||| || ||||||||| ||| || ||| ||||| |||||    
T  39998296 -ttttcttaatatgtatgaaatgagaaaatggctcaattaaactggga 39998342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 42412464 - 42412330
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||| | | ||| ||||||||  ||| ||  ||| ||||||| ||||||||||| | ||||||    
T  42412464 tcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcact 42412365  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| |||||||||||| ||||||||||||||||    
T  42412364 tataca-tttttcttaatatgtgtgaaatgagcaaa 42412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 628 - 705
Target Start/End: Original strand, 10043378 - 10043455
Alignment:
Q  628 ctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtg 705  Q
    |||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  10043378 ctaaatttaaagcagtttcattattttatcaatctggtccttagagaaattaacataacagtgatcagaaacaaagtg 10043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 420 - 541
Target Start/End: Original strand, 29638335 - 29638455
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||| ||||||  ||||||| ||||||| |||  ||||||| |||| ||||||||| ||||||||||||||||  |||||| ||||||||     
T  29638335 aattcaatatattatactttacatttatgataaagaataatgaaccaatacttgacaaaggcattcaaaaccatttttctctttctttcatttatacac- 29638433  T
Q  520 ttttcttaataagtgtgaaatg 541  Q
    ||||||||||  ||||||||||    
T  29638434 ttttcttaatctgtgtgaaatg 29638455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 522
Target Start/End: Original strand, 14117490 - 14117598
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    |||| |||||||| |||||| |||||  ||||||| ||||||| |||||||||||| |||| ||||||| | ||||| | ||||||||| |||||  |||    
T  14117490 actttcaattcaatatattcaactttacatttatgataaagaagaatacaccaatacttgaaaaaggcactcaaaactaattttctctctctttccttta 14117589  T
Q  514 tacactttt 522  Q
    |||||||||    
T  14117590 tacactttt 14117598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 29451382 - 29451540
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||| ||||||| |||  || ||||||| |||| |||| |||    || ||||| |||||||||||  ||||| |||||||     
T  29451382 caattcaatatattatactttggatttatgataagaaagaatacactaatacttgacaaaatg-ttcaaaactatttttctctc--tttcatttatacat 29451478  T
Q  519 ---tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
       |||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  29451479 cattttttcttaatatgtgtgaaatgaacaaaaggttcggttaaaatgggatggaggaagta 29451540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 418 - 541
Target Start/End: Original strand, 28791340 - 28791462
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| |||||||| |||  ||||||| ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||||||| ||||   |||||||    
T  28791340 ccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttactttataca 28791439  T
Q  518 ctttttcttaataagtgtgaaatg 541  Q
    | ||||||||||  ||||||||||    
T  28791440 c-ttttcttaatctgtgtgaaatg 28791462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 539
Target Start/End: Complemental strand, 40077823 - 40077705
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| || | |||| ||||||| |||| |||||| ||||||||     
T  40077823 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacac- 40077725  T
Q  520 ttttcttaataagtgtgaaa 539  Q
    ||||||||||| | ||||||    
T  40077724 ttttcttaatatgagtgaaa 40077705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 548
Target Start/End: Complemental strand, 27868399 - 27868271
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||| || ||||  | ||||| |||| ||   ||  ||||||||||||||||   | |||||| |||||     
T  27868399 caattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttttctccatcattcactaataca- 27868301  T
Q  519 tttttcttaataagtgtgaaatgagcaaaa 548  Q
    ||||||||||||||||||||||||||||||    
T  27868300 tttttcttaataagtgtgaaatgagcaaaa 27868271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 571
Target Start/End: Complemental strand, 27973761 - 27973609
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    |||||||||  |||||||||||| ||||||| ||| |  ||||  | ||||| |||| ||   || |||||||||||||||||   | |||||| |||||    
T  27973761 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 27973662  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
     |||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||    
T  27973661 -tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggag 27973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 571
Target Start/End: Complemental strand, 28031030 - 28030878
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    |||||||||  |||||||||||| ||||||| ||| |  ||||  | ||||| |||| ||   || |||||||||||||||||   | |||||| |||||    
T  28031030 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 28030931  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
     |||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||    
T  28030930 -tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggag 28030878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 428 - 543
Target Start/End: Complemental strand, 9734232 - 9734119
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    ||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||    | | ||| ||||||||||||  |||||| ||||||| ||||| |||    
T  9734232 atattttactttgcatttatgataaagaagaatgcaccaatagttgataagaatactcaaatccatttttctct--ctttcatttatacattttttttta 9734135  T
Q  528 ataagtgtgaaatgag 543  Q
    |||| |||||||||||    
T  9734134 ataaatgtgaaatgag 9734119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 486 - 577
Target Start/End: Original strand, 2797139 - 2797230
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||  |||||||||| ||||| | ||| ||| ||| ||| ||||| ||||    
T  2797139 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 2797230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 7258448 - 7258314
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||| || |||| |||||||| |||| ||  ||  ||||||||||||||||||  | |||| |    
T  7258448 tcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttccttcatt 7258349  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaa 547  Q
     ||| | ||||| |||||||||||||||| ||||||    
T  7258348 aatata-ttttttttaataagtgtgaaataagcaaa 7258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 574
Target Start/End: Original strand, 8840445 - 8840514
Alignment:
Q  504 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaa 574  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||| ||| ||| ||||||| |||||||    
T  8840445 ctttcacttatacaatttttcttaatatgtgtgaaatga-caaaaggctcacttataatgggacggaggaa 8840514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 538
Target Start/End: Complemental strand, 15559203 - 15559086
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||| ||||||| ||| |  ||||||||||||| |||| ||   || |||||| ||||||| |||| | |||||| ||||| |    
T  15559203 aattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctctccttcactaataca-t 15559105  T
Q  520 ttttcttaataagtgtgaa 538  Q
    |||||||||||| ||||||    
T  15559104 ttttcttaataaatgtgaa 15559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 567
Target Start/End: Original strand, 37459377 - 37459521
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| |||||| || |||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||  |||       ||||||| ||||  ||||| ||    
T  37459377 cactcccaatttaatatattcaactttgcatttatgataaagaagaatacatcaatagttgatcaa--cat-------catttttttctctttttcattt 37459467  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggag 567  Q
    |||||||||| ||||||||||||||||||||| || |  | ||||||||||||||    
T  37459468 atacactttt-cttaataagtgtgaaatgagccaatgacttagttaaaatgggag 37459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 418 - 582
Target Start/End: Original strand, 41726553 - 41726714
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||||| | ||||| || |||||||  |||||  |||||||    
T  41726553 ccaattcaatatattctactttacatttatgataaagaagaatgcaacaatacttgaaaaaggcactcaaaactatatttctct--ctttcttttataca 41726650  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactttt 582  Q
     |||||||||||  ||||||||||   ||   ||||||||||| ||||| ||||| |||| ||||    
T  41726651 -tttttcttaatctgtgtgaaatggaaaattagttcagttaaactgggacggagggagtaatttt 41726714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 577
Target Start/End: Complemental strand, 36012001 - 36011909
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag-gttcagttaaaatgggagggaggaagta 577  Q
    |||||||||| ||| || ||||||||||||||| ||||||||| |  |||||||||| ||||||  || | ||||||||||| ||||||||||    
T  36012001 aaaaccatttctctttctctttcacttatacacattttcttaacatatgtgaaatgaacaaaagacttgacttaaaatgggacggaggaagta 36011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 1354206 - 1354159
Alignment:
Q  274 cagaacaatttggttcctttttctaatgcaactttgaatggctgcaaa 321  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  1354206 cagatcaatttggttcatttttcttatgcaactttgaatggctgcaaa 1354159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 549
Target Start/End: Complemental strand, 325105 - 325028
Alignment:
Q  471 ttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||| ||||||| | |||||||||||||| ||| ||||||||||||| ||| |||||||| || |||||||| ||||||    
T  325105 ttgacaaaggcaatcaaaaccatttttctttccttttcacttataca-tttgtcttaatatgtttgaaatgaacaaaag 325028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 418 - 544
Target Start/End: Original strand, 29615830 - 29615955
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| |||||| |||||  |||||||  |  | ||| |||||||||| || | ||  ||||||||||  ||||||||||| | |||| |||||||    
T  29615830 ccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtgcatttaaaattatttttctctctccttcatttataca 29615929  T
Q  518 ctttttcttaataagtgtgaaatgagc 544  Q
     |||||||||||| |||||||||||||    
T  29615930 -tttttcttaatacgtgtgaaatgagc 29615955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 418 - 516
Target Start/End: Complemental strand, 41759705 - 41759607
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 516  Q
    ||||||||| ||||| ||||||||||||||| ||||||| ||| |||||||| |||| || | || | |||  ||||||| |||| ||||||| |||||    
T  41759705 ccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattgacaaggacactcaaactcatttttttctctctttcacatatac 41759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 577
Target Start/End: Complemental strand, 2875094 - 2875005
Alignment:
Q  488 aaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||  ||||||||||| ||| |||||||||||  |||||||||| ||||| | | | ||| ||||||| ||||| ||||    
T  2875094 aaccatttttctctttctttcacttattcaccttttcttaatagttgtgaaatgaacaaaaagcttatttataatgggacggagggagta 2875005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 536
Target Start/End: Complemental strand, 5423238 - 5423122
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| || ||| |||||||||||||| ||| |  ||||||||||||  |||| || | || | |||| |||||||||||| ||||||||||| ||     
T  5423238 caattcaatatcttccactttgtatttatgataatggtaaatacaccaatgcttgacaaggacactcaaaatcatttttctctctctttcacttatgca- 5423140  T
Q  519 tttttcttaataagtgtg 536  Q
    ||| |||||||| |||||    
T  5423139 tttatcttaatatgtgtg 5423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 540
Target Start/End: Original strand, 26677115 - 26677227
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaac-catttttctctccctttcacttatacactttttctt 526  Q
    ||||||||||||| ||||||| ||| |   ||| |||||||| || | || | || |||||||  ||||||||||| |||||||||||||| ||||||||    
T  26677115 atattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttataca-tttttctt 26677213  T
Q  527 aataagtgtgaaat 540  Q
    |||| |||||||||    
T  26677214 aatatgtgtgaaat 26677227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 543
Target Start/End: Original strand, 139055 - 139178
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||  |||||| |||||| ||||||| ||  | ||||| |||||||| || | ||  | |||||||| ||||||| |||| | |||| |||||||     
T  139055 caattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcatttataca- 139153  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||| ||||||||||||    
T  139154 tttttcttaatatgtgtgaaatgag 139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 554
Target Start/End: Original strand, 11637173 - 11637308
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccct-ttcacttataca 517  Q
    |||||||| ||||||||||||  ||||||| ||||||| |||  | ||||| |||  |||| || | ||||| |||||||||||    || |||||||||    
T  11637173 caattcaatatattctactttacatttatgataaagaataatgtatcaatacttggcaaagacactcaaaac-atttttctctcttaatttacttataca 11637271  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttca 554  Q
    ||||||||||||| |||||| |||| ||||| |||||    
T  11637272 ctttttcttaatatgtgtgacatgaacaaaatgttca 11637308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 37703085 - 37703147
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| ||||||||||||  |||| |||||||| |||||||||||| ||||||||||| ||||    
T  37703085 ttaaaatcatttttctctctttttcgcttataca-tttttcttaatatgtgtgaaatgatcaaa 37703147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 419 - 522
Target Start/End: Complemental strand, 5878300 - 5878196
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttc--tctccctttcacttatac 516  Q
    |||||||| ||||||||||||  ||||||| ||| | | |||  || |||| |||| |||| ||||||||||||||||||  |||| |||||| ||||||    
T  5878300 caattcaatatattctactttacatttatgataa-gtagaatgaactaatacttgacaaagacatttaaaaccatttttctctctctctttcatttatac 5878202  T
Q  517 actttt 522  Q
    ||||||    
T  5878201 actttt 5878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 12653763 - 12653844
Alignment:
Q  462 caccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    |||||||| || | ||| ||| ||||||| |||||||||||   |||| ||||||| |||||||||||| |||||||||||||    
T  12653763 caccaatatttaacaaacgcacttaaaactatttttctctctacttcatttataca-tttttcttaatacgtgtgaaatgagc 12653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 419 - 537
Target Start/End: Original strand, 28802800 - 28802917
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||| ||  | | |||| | ||||| || | ||  ||| ||||||||||||||||||| |||||| |||||||     
T  28802800 caattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagagcacttaaaaccatttttctctctctttcatttataca- 28802898  T
Q  519 tttttcttaataagtgtga 537  Q
    ||| |||||||| ||||||    
T  28802899 tttgtcttaatacgtgtga 28802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 2e-42; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 413 - 577
Target Start/End: Original strand, 28330821 - 28330985
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||| ||| ||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  28330821 cactcccaattcaatataatctgctttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactt 28330920  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||| ||||| ||||    
T  28330921 atacactttttcttaataagtgtgaaatgagtcaatggctcagttaaaatgggacggagggagta 28330985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 418 - 566
Target Start/End: Original strand, 8759811 - 8759959
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| || |||||||||||||  | | | ||| ||||||||||||| |||||| |||||||    
T  8759811 ccaattcaatatattctactttgcatttatgataaagaaaaatgcatcaatagttgataagtgaactgaaacccatttttctctctctttcatttataca 8759910  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||| ||||||||| ||||||||| ||||||||| ||||||||||||    
T  8759911 cttttttttaataagtttgaaatgagtaaaaggttcggttaaaatggga 8759959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 20964368 - 20964204
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||| | ||||||||||||| ||||| | ||||||| ||| |||||||||||||||||| ||   |||  |||||||||||| |||||||||    
T  20964368 cacttccaattcgatatattctactttgcatttacgataaagaagaatgcaccaatagttgataaagacacgcaaactcatttttctctctctttcactt 20964269  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  20964268 atacactttttcttaataagtgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 20964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 37316002 - 37315838
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||| |||| |||||  ||||||||||||||||| |||||||||    
T  37316002 cactcccaattcaacatattctactttgcatttatgataaagaaaaatgcactaatagttaataagggcatccaaaaccatttttctctctctttcactt 37315903  T
Q  513 atacac-tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    || ||| ||||||||||||||||| |||||||| ||||  ||| |||||| |||| ||||| ||||    
T  37315902 at-cacttttttcttaataagtgttaaatgagccaaagtctcaattaaaacgggacggagggagta 37315838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 419 - 540
Target Start/End: Original strand, 38319944 - 38320065
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||||||||    
T  38319944 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacac 38320043  T
Q  519 tttttcttaataagtgtgaaat 540  Q
    ||||||||||||| ||||||||    
T  38320044 tttttcttaataaatgtgaaat 38320065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 32949923 - 32949775
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaa-ccatttttctctccctttcacttataca 517  Q
    |||||||| ||||||||||||  ||||||| ||||||||||| |||||||||||||||||| || | |||| |||||||||| ||  ||||| |||||||    
T  32949923 caattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttgataaagacactcaaaaaccatttttctatctatttcatttataca 32949824  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||| |||||||||||||||||||  ||||| |||||||||||||||    
T  32949823 cttttttttaataagtgtgaaatgagtcaaaggctcagttaaaatggga 32949775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 413 - 543
Target Start/End: Original strand, 42132840 - 42132972
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggc--atttaaaaccatttttctctccctttcac 510  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| ||| || |||||||| |||| |||  | | ||| ||||||||||||| |||||||    
T  42132840 cacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagtttataagggcgcactcaaacccatttttctctctctttcac 42132939  T
Q  511 ttatacactttttcttaataagtgtgaaatgag 543  Q
    |||||||||||||||||||||||||||||||||    
T  42132940 ttatacactttttcttaataagtgtgaaatgag 42132972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 419 - 544
Target Start/End: Complemental strand, 49218856 - 49218732
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||| ||||||| |||||| || | ||||||||| |||||| |||| |  || ||||||||||||| |||||||||||||||    
T  49218856 caattcaatatattatactttgaatttatgataaagagaa-tgcaccaatagctgataagggcactctaacccatttttctctctctttcacttatacac 49218758  T
Q  519 tttttcttaataagtgtgaaatgagc 544  Q
    ||||||||||||||||||||||||||    
T  49218757 tttttcttaataagtgtgaaatgagc 49218732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 419 - 563
Target Start/End: Original strand, 53848679 - 53848823
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| |||| | |||| ||||||| |||| ||| |||||||||||    
T  53848679 caattcaatatattctactttgcatttatgataaataataatgcaccaatagttgataagggcactcaaaatcatttttttctctcttacacttatacac 53848778  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 563  Q
    |||||||||||||  ||||||||| | ||| | ||| ||||||||    
T  53848779 tttttcttaataaacgtgaaatgaaccaaaagctcaattaaaatg 53848823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 419 - 543
Target Start/End: Complemental strand, 48400705 - 48400582
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| ||||||| |||||| ||||| |||||||| ||||| |||| |||||||||||| |||||| |||||||     
T  48400705 caattcaatatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcatttataca- 48400607  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||  ||||||||||||    
T  48400606 tttttcttaatctgtgtgaaatgag 48400582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 543
Target Start/End: Complemental strand, 22020584 - 22020462
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||| |||||||  || ||||||||| ||||| | | ||||||||||| ||||| || ||| ||||||||    
T  22020584 caattcaatatattctactttgcatttatgataa-gaaaaatgtacaaatagttgacaaaggaactcaaaaccatttt-ctctcactctcatttatacac 22020487  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||||||||||||||||    
T  22020486 tttttcttaataagtgtgaaatgag 22020462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 416 - 577
Target Start/End: Complemental strand, 25902539 - 25902378
Alignment:
Q  416 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 515  Q
    ||||||||||| |||||| ||||| |||||||   |||||| ||| ||| |||| || | |||  || | ||||||||||| ||  | ||||||||||||    
T  25902539 ttccaattcaatatattcaactttatatttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccattttacttcctctttcacttata 25902440  T
Q  516 cactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||| |||||||||||| |||| | |||||||  |||||| ||||||||||    
T  25902439 cactttttcttaatatgtgtgaaatgaggaaaatgctcagttattatgggacggaggaagta 25902378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 486 - 577
Target Start/End: Complemental strand, 5499440 - 5499349
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||| |||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||| || |||||||||||| ||||| ||||    
T  5499440 aaaactatttttctttctctttcacttatacactttttcttaatatgtgtcaaatgaacaaaaggctcggttaaaatgggacggagggagta 5499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 458 - 577
Target Start/End: Original strand, 54217441 - 54217562
Alignment:
Q  458 aatacaccaatagttgataaaggcatttaaaaccattttt--ctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcag 555  Q
    ||||||||||||||||| || || | | ||| ||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||  |||||  | |    
T  54217441 aatacaccaatagttgacaagggtactcaaacccatttttttctctctctttcacttatacactttttcttaataagtatgaaatgagtcaaaggccccg 54217540  T
Q  556 ttaaaatgggagggaggaagta 577  Q
    ||||||||||| ||||| ||||    
T  54217541 ttaaaatgggacggagggagta 54217562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 22872462 - 22872303
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaagg--catttaaaaccatttttctctccctttcacttatac 516  Q
    |||||||| |||||| |||||| ||||||| ||| | | ||| |||||||| |||| ||| |  || |||||||||||||||||||   |||||||||||    
T  22872462 caattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccatttttctctcttcttcacttatac 22872363  T
Q  517 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    | |||||||||||| |||||||||||||||| || ||| ||||  ||||| ||||| ||||    
T  22872362 a-tttttcttaatatgtgtgaaatgagcaaatggctcacttaatttgggacggagggagta 22872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 522
Target Start/End: Complemental strand, 42051736 - 42051627
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||  ||||||||||||  ||||||| ||||||| ||| |||||||| ||| ||||| || | |||||||||||||| || |||||| ||    
T  42051736 cacttccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttgctaaagacactaaaaaccatttttctatctctttcattt 42051637  T
Q  513 atacactttt 522  Q
    ||||||||||    
T  42051636 atacactttt 42051627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 492 - 563
Target Start/End: Complemental strand, 18872656 - 18872585
Alignment:
Q  492 atttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 563  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  18872656 atttttcgctctctttcacttatacactttttcttaatacgtgtgaaatgaacaaaatgttcacttaaaatg 18872585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 419 - 550
Target Start/End: Complemental strand, 47277756 - 47277625
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||  ||||||| |||||||||||  || ||||  ||| || |||||| ||||  |||||| |||  |||| |||||||||     
T  47277756 caattcaatatattttactttacatttatgataaagaaaaatgtacaaatacctgacaagggcattgaaaaatatttttatctatcttttacttatacat 47277657  T
Q  519 tttttcttaataagtgtgaaatgagcaaaagg 550  Q
    |||||||||||| |||||||||||||||||||    
T  47277656 tttttcttaatatgtgtgaaatgagcaaaagg 47277625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 559
Target Start/End: Complemental strand, 4360482 - 4360343
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||||||  | | ||| |||||||| || | ||| ||| ||||||||||||||||||  | |||| ||||||      
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac-t 4360384  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||||||||| ||||||||||| |||| || ||||||||    
T  4360383 tttttcttaatatgtgtgaaatgaacaaatggctcagttaa 4360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 41594864 - 41594764
Alignment:
Q  477 aaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagt 576  Q
    |||||| | ||||||||||||||||| |||||||||| ||||||||||| ||||  |||||||||| ||||||| ||  ||| ||||||| ||||| |||    
T  41594864 aaggcactcaaaaccatttttctctctctttcacttaaacactttttctcaatatatgtgaaatgaacaaaaggctcgcttataatgggacggagggagt 41594765  T
Q  577 a 577  Q
    |    
T  41594764 a 41594764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 559
Target Start/End: Original strand, 33047518 - 33047664
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||||||||||||| |||||| |||||||||||||| ||  | | |||  ||||||| || | ||| ||| |||||||||||||||||||   ||   |    
T  33047518 tcacttccaattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttttctctcttctttgtt 33047617  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||| |||||||||||| ||||||||||||| || || ||||||||    
T  33047618 tataca-tttttcttaataggtgtgaaatgagctaatggctcagttaa 33047664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 419 - 542
Target Start/End: Complemental strand, 34791026 - 34790903
Alignment:
Q  419 caattcaacatattctactttgta--tttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 516  Q
    |||||||| |||||||||||| ||  |||||| ||||||| ||| ||| |||| |||||||| ||| | |||| |||||||||||| |||||| ||||||    
T  34791026 caattcaatatattctacttt-tacttttatgataaagaagaatgcacaaatacttgataaaagcactcaaaatcatttttctctcactttcatttatac 34790928  T
Q  517 actttttcttaataagtgtgaaatga 542  Q
    || ||||||||||| ||||| |||||    
T  34790927 ac-ttttcttaatatgtgtgcaatga 34790903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 560
Target Start/End: Complemental strand, 39052975 - 39052835
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||||||| || | |||  | ||||| | || |||||| |||||||     
T  39052975 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaattcttttttttttctctttcatttataca- 39052877  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
    |||||||||||  |||||||||||| |||  ||||| |||||    
T  39052876 tttttcttaatctgtgtgaaatgagaaaattgttcaattaaa 39052835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 415 - 579
Target Start/End: Original strand, 28279866 - 28280029
Alignment:
Q  415 cttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttat 514  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||| |||||||| || | |||| || | ||||| |||| ||| || ||||   ||||    
T  28279866 cttccaattaaatatattctactttatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactatttctctttctcttttctttat 28279965  T
Q  515 acactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 579  Q
    ||| |||||||||||   |||||||||   ||  || ||||||||| ||||| ||||||||||||    
T  28279966 aca-tttttcttaatctctgtgaaatggaaaattggctcagttaaactgggacggaggaagtact 28280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 419 - 539
Target Start/End: Original strand, 41436514 - 41436633
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||  | | ||| ||||||||  | | ||| ||| |||||||||||||| |||| || ||||||||||||    
T  41436514 caattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctctctctcacttatacac 41436613  T
Q  519 tttttcttaataagtgtgaaa 539  Q
     ||||||||||| ||||||||    
T  41436614 -ttttcttaatatgtgtgaaa 41436633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 495 - 571
Target Start/End: Original strand, 46958828 - 46958904
Alignment:
Q  495 tttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||| |||||   |||||||||| |||| ||||    
T  46958828 tttctctatctttcacttatacactttttcttaatatgtgtgaaatgaacaaaatactcagttaaaaggggacggag 46958904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 8295127 - 8295201
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||  |||||||||||||||| || ||||||||    
T  8295127 ttaaaacaatttttctctctctttcatttataca-tttttcttaatttgtgtgaaatgagcaaatggctcagttaa 8295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 29550802 - 29550680
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| |||||||  | ||| ||||| || | ||||||| | ||||| ||||||||||| |||||  |||||||    
T  29550802 ccaattcaatatattctactttacatttatgataaagaatgaaacatcaatacttaaaaaaggcactcaaaactatttttctctctctttcctttataca 29550703  T
Q  518 ctttttcttaataagtgtgaaatg 541  Q
     |||||||||||  ||||||||||    
T  29550702 -tttttcttaatctgtgtgaaatg 29550680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 41203763 - 41203897
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    |||||| |||||||| |||||| |||||||||||||| ||  ||| ||| || ||||| || | ||  ||| | |||||||||||||| || | |||| |    
T  41203763 tcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcatt 41203862  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| |||||||||||| |||||||| |||||||    
T  41203863 tataca-tttttcttaatacgtgtgaaacgagcaaa 41203897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 36046039 - 36045994
Alignment:
Q  505 tttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 550  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  36046039 tttctcttatacactttttcttaataagtgtgaaatgagccaaagg 36045994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 419 - 547
Target Start/End: Original strand, 49448874 - 49448999
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||| ||||||| |||   | ||| ||| |||| |||| ||  ||| ||||||||||||||||||| | ||||||||||||     
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttataca- 49448972  T
Q  519 tttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||  |||||||||| ||||    
T  49448973 tttttcttaata--tgtgaaatgaacaaa 49448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 13529961 - 13530017
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||||||    
T  13529961 aaaaccatttttctctctctttcgcttgtacattttttcttaatatgtgtgaaatga 13530017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 412 - 559
Target Start/End: Complemental strand, 42024282 - 42024136
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||||||||||||| |||||| |||||| ||||||  ||  | | |||| ||||||| || | ||  | | ||||||||||||||||||| | |||| |    
T  42024282 tcacttccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagagtagttaaaaccatttttctctctccttcatt 42024183  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||| ||| |||||||| ||||||  |||||||| || ||||||||    
T  42024182 tataca-tttgtcttaatatgtgtgatttgagcaaatggctcagttaa 42024136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 419 - 477
Target Start/End: Complemental strand, 36047174 - 36047116
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa 477  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||    
T  36047174 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataa 36047116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 11583704 - 11583647
Alignment:
Q  514 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
    |||| ||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||    
T  11583704 tacattttttcttaataaatgtgaaatgagccaaaggctcagctaaaatgggacggag 11583647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 40021029 - 40020892
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| |||||| || |||||||  |||| || |||| ||| |  |||| |||||||| |||| |||  |||| ||||||||||||||||| | ||||||    
T  40021029 tcactcccaatttaatatattcttttttgcatctatgataatggtaaatgcaccaatacttgacaaaaacattcaaaaccatttttctctctcattcact 40020930  T
Q  512 ta-tacac-tttttcttaataagtgtgaaatgagcaaa 547  Q
    || || || |||||||||||| ||||||||||| ||||    
T  40020929 tagtatacatttttcttaatatgtgtgaaatgaccaaa 40020892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 491 - 547
Target Start/End: Original strand, 12619792 - 12619847
Alignment:
Q  491 catttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||| | |||||||||||||| ||||||||||||||| |||||||| ||||    
T  12619792 catttttctcgctctttcacttataca-tttttcttaataagtatgaaatgaacaaa 12619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 547
Target Start/End: Original strand, 17237076 - 17237203
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||| ||   || ||| ||| |||| || | |||  || ||||||| ||||||||||| | |||| ||||| |     
T  17237076 caattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatata- 17237174  T
Q  519 tttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||||| ||||||||||||||||    
T  17237175 tttttcttaataggtgtgaaatgagcaaa 17237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 547
Target Start/End: Complemental strand, 38160226 - 38160099
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||  |||||||||||||| ||| | | ||| || ||||| |||| |||| || ||||||| ||||||||||| | || | |||||||     
T  38160226 caattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatttataca- 38160128  T
Q  519 tttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||  | | |||||||||||    
T  38160127 tttttcttaatatatataaaatgagcaaa 38160099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 10099800 - 10099749
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaata 469  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||    
T  10099800 ccaattcaatatattctactttaaatttatgataaagaaaaatgcaccaata 10099749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 571
Target Start/End: Complemental strand, 35027578 - 35027420
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    |||||| ||||| || |||||  ||||||  |||||| |||  | |||| |||||||| |||| || | |||||||||  ||||||||| |  ||||| |    
T  35027578 tcactttcaatttaatatatttaactttgcgtttatgataataataaatgcaccaatatttgacaa-gacatttaaaattatttttctccctttttcaat 35027480  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 571  Q
    |||||||||||| |||||| ||||||||| | |||||   ||||||||||| ||| ||||    
T  35027479 tatacacttttttttaatatgtgtgaaataaacaaaatactcagttaaaataggatggag 35027420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 522
Target Start/End: Complemental strand, 35998191 - 35998088
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||  ||||||| ||||||| |||  ||||||| ||||||||| || | ||||  |||||||  || |||||| ||||||||    
T  35998191 caattcaatatattttactttacatttatgataaagaagaatgtaccaatacttgataaagacactcaaaattatttttcgttcgctttcatttatacac 35998092  T
Q  519 tttt 522  Q
    ||||    
T  35998091 tttt 35998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 547
Target Start/End: Complemental strand, 41710225 - 41710091
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | |||||| ||||||| || | ||  ||| |||||||||||||| ||||   |||| |    
T  41710225 tcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatt 41710126  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| ||| |||||||| ||||||  ||||||||    
T  41710125 tataca-tttgtcttaatatgtgtgatttgagcaaa 41710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 542
Target Start/End: Original strand, 1920846 - 1920884
Alignment:
Q  504 ctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  1920846 ctttcacttatacattttttcttaatatgtgtgaaatga 1920884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 539
Target Start/End: Original strand, 25149479 - 25149604
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaa-gaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    ||||||||||||| |||||| |||||  ||||||| |||| ||  ||| |||||||| || | ||||||| | ||||| ||||||||||| ||||   ||    
T  25149479 acttccaattcaatatattccactttacatttatgataaaagaggaatgcaccaatacttaaaaaaggcactcaaaactatttttctctctcttttcgtt 25149578  T
Q  513 atacactttttcttaataagtgtgaaa 539  Q
    |||||| ||||||||||  ||||||||    
T  25149579 atacac-ttttcttaatctgtgtgaaa 25149604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 54729558 - 54729434
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||| ||  | | ||||||| |||| || | |||  || ||||||| ||||||||||| |||||| |||||||     
T  54729558 caattcaatatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacat 54729459  T
Q  519 tt---tttcttaataagtgtgaaat 540  Q
    ||   |||||||||| |||||||||    
T  54729458 ttttctttcttaatatgtgtgaaat 54729434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 523
Target Start/End: Original strand, 13719811 - 13719912
Alignment:
Q  422 ttcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttt 521  Q
    ||||| ||||| ||||||  ||||||| ||||||| |||||| || || || | |||| || | ||| |||||||||| || |||||| |||||||||||    
T  13719811 ttcaatatattatactttacatttatgataaagaataatacatcattacttaacaaagacactcaaacccatttttctttctctttcatttatacacttt 13719910  T
Q  522 tt 523  Q
    ||    
T  13719911 tt 13719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 517
Target Start/End: Original strand, 49306621 - 49306718
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||| |||||| |||||| ||||||| ||  | | |||| ||||||| || | ||  ||| ||||||||||||||||||| |||||| |||||||    
T  49306621 aattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaaccatttttctctctctttcatttataca 49306718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 529
Target Start/End: Original strand, 49401686 - 49401798
Alignment:
Q  416 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 515  Q
    ||||||||||| ||||||||||||  ||||||  ||||||| |||  | ||||| |||| || | |||| ||||| ||||||||||| ||||   |||||    
T  49401686 ttccaattcaatatattctactttacatttataataaagaacaatgtatcaatacttgaaaaggacattcaaaactatttttctctctctttactttata 49401785  T
Q  516 cactttttcttaat 529  Q
    || |||||||||||    
T  49401786 ca-tttttcttaat 49401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 413 - 577
Target Start/End: Original strand, 13222095 - 13222259
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||| ||||||| ||||||| ||||||| |||||||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  13222095 cacttccaattcaatatattttactttgcatttatgataaagaagaatacaccaatagttgataagggcactcaaacccatttttctctctctttcactt 13222194  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||| |||||||||||||||||||||| ||  || || || |||||||||||| ||||| ||||    
T  13222195 atacattttttcttaataagtgtgaaataagtcaatggctcggttaaaatgggacggagggagta 13222259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 414 - 577
Target Start/End: Original strand, 314455 - 314618
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    |||| |||||||| ||||||||||||| ||||||| ||||||| ||| || ||||||||||||| |||| | ||||||||||| ||||| ||||||||||    
T  314455 actttcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcactta 314554  T
Q  514 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  314555 tacactttttcttaataagtgtgaaatgagtcaatcgctcagttaaaatgggacggagggagta 314618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 419 - 572
Target Start/End: Complemental strand, 6972614 - 6972462
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| |||| | ||||||||||| ||||| ||||||||||||||     
T  6972614 caattcaatatattctactttgcatttatgataaagaagaatgcacaaatagttgataagggcactcaaaaccatttt-ctctctctttcacttatacat 6972516  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 572  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||| |||||    
T  6972515 tttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagg 6972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 4283093 - 4282934
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||||| |||  ||||||| ||||||  ||| |||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||    
T  4283093 caattcaatatattctattttacatttatgataaagaggaatgcaccaatacttgataagggcattcaaaaccatttttctctctcttttacttatacac 4282994  T
Q  519 t-ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    | ||||||||||||  || |||||||||||||  |||||||||||| || ||||||||||    
T  4282993 ttttttcttaataaacgtaaaatgagcaaaagactcagttaaaatgagacggaggaagta 4282934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 428 - 566
Target Start/End: Complemental strand, 928603 - 928466
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||| | ||| |||||||| | || |||||||||||||  |||||||||    
T  928603 atattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaacccattttttt-tctctttcacttatacgttttttctta 928505  T
Q  528 ataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    ||||||||||||||||| || || |||||||||||||||    
T  928504 ataagtgtgaaatgagccaagggctcagttaaaatggga 928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 419 - 543
Target Start/End: Original strand, 2048325 - 2048448
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| |||| || ||| ||||||||||||||||  ||| | | ||||||||||||||| ||||||||||||||     
T  2048325 caattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttataca- 2048423  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    ||||| |||||||||||||||||||    
T  2048424 ttttttttaataagtgtgaaatgag 2048448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 543
Target Start/End: Complemental strand, 43950529 - 43950399
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    |||||| |||||||| ||||||||||||| ||||||| ||| | |||||||| ||||| || | |||  |||||||||| ||||||||||| ||||||||    
T  43950529 tcactttcaattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcact 43950430  T
Q  512 tatacactttttcttaataagtgtgaaatgag 543  Q
    |||||| ||||| |||||||||||||||||||    
T  43950429 tataca-ttttttttaataagtgtgaaatgag 43950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 418 - 543
Target Start/End: Original strand, 9724910 - 9725034
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||| ||| | |||| ||||| |||||| |||||| |||||||    
T  9724910 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttataca 9725009  T
Q  518 ctttttcttaataagtgtgaaatgag 543  Q
    | ||||||||||| ||||||||||||    
T  9725010 c-ttttcttaatatgtgtgaaatgag 9725034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 413 - 584
Target Start/End: Complemental strand, 37529151 - 37528981
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    ||||||||||||||  |||||||||||  ||||||| |||||||||||| ||||||| || | |||| || | ||||||||||||||||  | || |||     
T  37529151 cacttccaattcaatttattctactttacatttatgataaagaaaaatagaccaatacttaacaaagacactcaaaaccatttttctctatcctttacta 37529052  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactttttt 584  Q
    ||| | ||||| |||||||||||||||||| |||| |  ||||||||| ||||| ||||| |||| ||||||    
T  37529051 atata-ttttttttaataagtgtgaaatgaacaaatgactcagttaaattgggacggagggagtaatttttt 37528981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 547
Target Start/End: Original strand, 2427387 - 2427521
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| |||||||  |||||| ||| | |||||| || |||| |||||| ||| ||||||||||||   | ||| ||    
T  2427387 cactcccaattcaatatattctactttgcatttatgacaaagaagaatgctccaataattaataagggcattcaaacccatttttctctatatgtcagtt 2427486  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||||||||| | |||||||||||||    
T  2427487 atacactttttcttaataaatatgaaatgagcaaa 2427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 413 - 548
Target Start/End: Complemental strand, 38873000 - 38872867
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| |||||  ||||| |||||||| ||||||  ||| || ||||||||||||| | || | |||||||||||| | || ||| |||||    
T  38873000 cactcccaattcaatatatt--actttatatttatgataaagaggaatgcatcaatagttgataaggacactcaaaaccatttttttttctcttccactt 38872903  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaa 548  Q
     |||||||||||||||||||| ||||||||||||||    
T  38872902 ttacactttttcttaataagtatgaaatgagcaaaa 38872867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 419 - 566
Target Start/End: Original strand, 7213508 - 7213654
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||  ||||||  ||||||| ||| |||||||| |||||||||||| | |||| ||||||||||||  ||||| |||||||     
T  7213508 caattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcatttataca- 7213606  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||||||||  |||||||||||| ||| || ||| ||||| |||||    
T  7213607 tttttcttaatctgtgtgaaatgagaaaatggctcaattaaactggga 7213654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 575
Target Start/End: Complemental strand, 43427167 - 43427005
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttg-ataaaggcatttaaaaccatttttctctccctttcac 510  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||||||| ||| ||| |||||||  | || |||| | ||| | |||||||||||  |||||     
T  43427167 tcactcccaattcaatatattctattttgcatttatgataaagaagaatgcactaatagtttcacaagggcactcaaacctatttttctctc--tttcat 43427070  T
Q  511 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaag 575  Q
    |||||||||||||||||| |||| |||||||||  ||  | ||||||||||||||| ||||||||    
T  43427069 ttatacactttttcttaaaaagtatgaaatgagtcaatagctcagttaaaatgggacggaggaag 43427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 418 - 541
Target Start/End: Original strand, 24356143 - 24356265
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||||||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||||| | ||||| | ||||||||| |||||  |||||||    
T  24356143 ccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttgaaaaaggcactcaaaactagttttctctctctttcctttataca 24356242  T
Q  518 ctttttcttaataagtgtgaaatg 541  Q
    | ||||||||||  ||||||||||    
T  24356243 c-ttttcttaatctgtgtgaaatg 24356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 559
Target Start/End: Original strand, 5425969 - 5426031
Alignment:
Q  497 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  5425969 tctctctctttcacttatacactttttcttaatacgtgtgaaatgaacaaaaggatcagttaa 5426031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 549
Target Start/End: Complemental strand, 10069659 - 10069530
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||| ||| |  |||| ||| |||| |||| ||| | | |||||| ||||||| |||| |||||||||||| |     
T  10069659 caattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcacttatata- 10069561  T
Q  519 tttttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||||||||| |||||||||||||||||||    
T  10069560 tttttcttaatgagtgtgaaatgagcaaaag 10069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 542
Target Start/End: Complemental strand, 38280258 - 38280148
Alignment:
Q  431 ttctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaata 530  Q
    |||||||||  ||||||| ||||||| ||| |||||||| || | ||||||| | |||||||||||||||||  ||||  ||||||| ||||||||||||    
T  38280258 ttctactttacatttatgataaagaagaatgcaccaatatttaaaaaaggcactcaaaaccatttttctctctatttcctttataca-tttttcttaata 38280160  T
Q  531 agtgtgaaatga 542  Q
     |||||||||||    
T  38280159 tgtgtgaaatga 38280148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 18181288 - 18181168
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||| ||||||| ||  | | ||| ||||||||  | | ||| ||| ||||||||||||||||||| || |||||||||||    
T  18181288 ccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctctctctcacttataca 18181189  T
Q  518 ctttttcttaataagtgtgaaa 539  Q
    | ||||||||||  ||||||||    
T  18181188 c-ttttcttaatctgtgtgaaa 18181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 507
Target Start/End: Original strand, 31348545 - 31348632
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctcccttt 507  Q
    ||||||| |||||||||| || ||||||| |||| || ||| |||||||||||||||| |||| | ||| ||||||||||||| ||||    
T  31348545 aattcaatatattctactatgcatttatgataaaaaagaatgcaccaatagttgataagggcactcaaacccatttttctctctcttt 31348632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 580
Target Start/End: Complemental strand, 39166771 - 39166606
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||| ||||||  ||||||| |||| || |||  ||  ||| || |||| |||||| |||| ||||||||| || |||||||||||| |    
T  39166771 ccaattcaatatattatactttacatttatgataaaaaagaatgtacacataattaataagggcattcaaaatcatttttctttctctttcacttatata 39166672  T
Q  518 c---tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactt 580  Q
        ||||| ||||||| |||||||||||||||| | ||| ||||||||||| ||||  |||||||    
T  39166671 tatattttttttaataaatgtgaaatgagcaaaaagctcaattaaaatgggacggagcgagtactt 39166606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 547
Target Start/End: Complemental strand, 45464228 - 45464162
Alignment:
Q  480 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||| ||||||| |||| | |||||||||||| |||||||||||| ||||||||||||||||    
T  45464228 gcatttaaaatcatttttttctctcattcacttataca-tttttcttaatatgtgtgaaatgagcaaa 45464162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 515
Target Start/End: Complemental strand, 1908574 - 1908472
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| ||| |||| |||  |||| || | |||||||||||||||||  ||||| ||    
T  1908574 cacttccaattcaatatattctactttacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaaccatttttctctctatttcattt 1908475  T
Q  513 ata 515  Q
    |||    
T  1908474 ata 1908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 541
Target Start/End: Original strand, 18460521 - 18460642
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  |||||||  |||||| |||  ||||||| |||| |||| || | |||| ||||||||| || |||||| ||||||||    
T  18460521 caattcaatatattctactttacatttatgacaaagaagaatgtaccaatatttgacaaagacactcaaaatcatttttctatctctttcatttatacac 18460620  T
Q  519 tttttcttaataagtgtgaaatg 541  Q
     ||||||||||  ||||||||||    
T  18460621 -ttttcttaatctgtgtgaaatg 18460642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 541
Target Start/End: Original strand, 36748181 - 36748302
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||  ||||||| ||||||| ||  |||||||| |||| ||||| | | ||||| |||||||||||  ||||  ||||||||    
T  36748181 caattcaatatattttactttaaatttatgataaagaataacgcaccaatacttgaaaaaggaactcaaaactatttttctctctatttcttttatacac 36748280  T
Q  519 tttttcttaataagtgtgaaatg 541  Q
     ||||||||||| ||||||||||    
T  36748281 -ttttcttaatatgtgtgaaatg 36748302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 540
Target Start/End: Original strand, 3199925 - 3200049
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||   |||| ||| ||||||| | || | || | ||||||||||||||||| |||||| ||    
T  3199925 cactcccaattcaatatattatactttgcatttatgataaa---aaatgcacaaatagttaacaatgacactcaaaaccatttttctctctctttcattt 3200021  T
Q  513 atacactttttcttaataagtgtgaaat 540  Q
    |||||  |||||||||||| | ||||||    
T  3200022 atacatcttttcttaataaatatgaaat 3200049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 471 - 548
Target Start/End: Complemental strand, 14384133 - 14384057
Alignment:
Q  471 ttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaa 548  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||| | |||||||||||| || |||||||| |||||    
T  14384133 ttgataaag-cattcaaaaccatttttctctctctttcatttatatattttttcttaatatgtatgaaatgaacaaaa 14384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 419 - 539
Target Start/End: Original strand, 31592583 - 31592703
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||||||||||| |||  || ||| || ||||| |||| || | || |  |||| ||||||||||| |||||||||||||||    
T  31592583 caattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaa-gacactcgaaactatttttctctctctttcacttatacac 31592681  T
Q  519 -tttttcttaataagtgtgaaa 539  Q
     ||||| |||||| ||||||||    
T  31592682 ttttttattaatatgtgtgaaa 31592703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 559
Target Start/End: Original strand, 9472455 - 9472594
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||||||| |  ||||||| ||||||| |||  | ||||| |||| |||| || |  |||||||| |||| || |||||| |||||||     
T  9472455 caattcaatatattctactatacatttatgataaagaagaatgtatcaatacttgacaaagacactctaaaccattgttctatctctttcatttataca- 9472553  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||||||||| ||||||||||  |||  |||||||||||    
T  9472554 tttttcttaatatgtgtgaaatggtcaactggttcagttaa 9472594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 32556270 - 32556330
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||| ||||    
T  32556270 ttaaaaccatttttctctc--tttcacttatacac-ttttcttaatatgtgtgaaatgaacaaa 32556330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 542
Target Start/End: Original strand, 2756700 - 2756829
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    |||||||||||| || ||||||||||||  ||||||| ||| |  |||| ||| |||| |||| ||  ||| ||||||  |||||||||||   |||| |    
T  2756700 tcacttccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctcttcttcatt 2756799  T
Q  512 tatacactttttcttaataagtgtgaaatga 542  Q
     ||||| ||||||||||||||||||||||||    
T  2756800 aataca-tttttcttaataagtgtgaaatga 2756829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 566
Target Start/End: Complemental strand, 6213859 - 6213778
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||| |||||||||||  | |||||| || || |||||||||||||||||||||||||||||||  ||| ||||| |||||    
T  6213859 ttaaaatcatttttctctttcattcactaattca-tttttcttaataagtgtgaaatgagcaaaagactcacttaaattggga 6213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 542
Target Start/End: Original strand, 14890373 - 14890470
Alignment:
Q  442 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| ||||||| ||| ||| |||| ||||||||| || | |||||||||||| |||  |||||| ||||||| ||||||||| || ||||||||||    
T  14890373 atttatgataaagaagaatgcactaatacttgataaagacactcaaaaccatttttatct--ctttcatttataca-tttttcttagtatgtgtgaaatg 14890469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 883159 - 883100
Alignment:
Q  487 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||| || ||||||||||||||| ||||||||| | ||||||||||| ||||    
T  883159 aaaccatttttctttctctttcacttatacac-ttttcttaaaatgtgtgaaatgaacaaa 883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 543
Target Start/End: Complemental strand, 8550651 - 8550593
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 543  Q
    ||||||||| ||||||||| |||||||||||||| ||||||| |||  ||||||||||||    
T  8550651 ttaaaaccacttttctctctctttcacttataca-tttttctaaatgtgtgtgaaatgag 8550593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 550
Target Start/End: Complemental strand, 12950026 - 12949908
Alignment:
Q  431 ttctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaata 530  Q
    |||||||||| ||||||| |||| |  ||| |||||||| |||| || | || | ||||  |||||| |||| |||||||||||||| |||||| |||||    
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgacaa-gacactcaaaattatttttttctctctttcacttatacattttttcgtaata 12949928  T
Q  531 agtgtgaaatgagcaaaagg 550  Q
      |||||||||| |||||||    
T  12949927 tatgtgaaatgaacaaaagg 12949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 28527062 - 28527124
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||||||| | || | |||| ||||||| |||||||||||| ||||||||||||||||    
T  28527062 ttaaaaccatttttttttctccttcatttataca-tttttcttaatatgtgtgaaatgagcaaa 28527124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 40965112 - 40965170
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 543  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| ||||||||||||    
T  40965112 ttaaaactatttttctctctccttcatttataca-tttttcttaatacgtgtgaaatgag 40965170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 44736964 - 44737026
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| ||||||| |||| | || ||||||||| |||||||||||| ||||||||||||||||    
T  44736964 ttaaaatcatttttatctctcattaacttataca-tttttcttaatatgtgtgaaatgagcaaa 44737026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 542
Target Start/End: Original strand, 3123688 - 3123801
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    |||||| | |||||||||||| ||  ||| ||| |||||||| || || || ||| ||||||  |||||||||||   |||| ||||||| |||||||||    
T  3123688 atattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaaagcacttaaaattatttttctctctacttcagttataca-tttttctta 3123786  T
Q  528 ataagtgtgaaatga 542  Q
    ||| |||||||||||    
T  3123787 atatgtgtgaaatga 3123801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 494 - 540
Target Start/End: Complemental strand, 5007240 - 5007194
Alignment:
Q  494 ttttctctccctttcacttatacactttttcttaataagtgtgaaat 540  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  5007240 ttttctctctcttttacttatacacattttcttaatatgtgtgaaat 5007194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 542
Target Start/End: Complemental strand, 43077763 - 43077678
Alignment:
Q  456 aaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    ||||| ||||||||||| | ||   |||||||||| ||||||||||| | |||| ||||||| ||| |||||||| |||||||||||    
T  43077763 aaaatgcaccaatagttaacaagtacatttaaaactatttttctctctcattcatttataca-tttgtcttaatacgtgtgaaatga 43077678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 44024825 - 44024875
Alignment:
Q  504 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttca 554  Q
    |||||||||||| | |||||||||||| ||||||| ||| |||||||||||    
T  44024825 ctttcacttatagattttttcttaatacgtgtgaagtgaacaaaaggttca 44024875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 419 - 517
Target Start/End: Complemental strand, 44424337 - 44424241
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    |||||||| |||||| |||||| ||||||| |||  |||||| || ||||| |||| || | |||| ||||||||||| ||||| ||||||||||||||    
T  44424337 caattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaa-gacattcaaaaccatttt-ctctctctttcacttataca 44424241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 435087 - 435026
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacac-tttttcttaataagtgtgaaatgagc 544  Q
    ||||||| |||||| |||| |||||| |||||||  |||||||||||| |||||||||||||    
T  435087 ttaaaactatttttgtctctctttcatttatacatatttttcttaatacgtgtgaaatgagc 435026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 10394295 - 10394202
Alignment:
Q  481 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||  ||||||||||| | |||  ||||||| |||||||||||  ||||||||||| ||||  ||||||||||  ||||| ||||||||||    
T  10394295 catttaaaattatttttctctctccttcttttataca-tttttcttaat--gtgtgaaatgaacaaatagttcagttaatttgggatggaggaagta 10394202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 14306072 - 14306031
Alignment:
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
    ||||||||||||| |||||||||||||||| ||||| |||||    
T  14306072 tttttcttaataaatgtgaaatgagcaaaatgttcacttaaa 14306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 549
Target Start/End: Original strand, 39159717 - 39159780
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||||| |||||||||||| || |||||  |||| ||||||| |||||||||||||||||||||||    
T  39159717 ttaaaatcatttttctctctctatcactattaca-tttttct-aataagtgtgaaatgagcaaaag 39159780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 549
Target Start/End: Complemental strand, 39209477 - 39209414
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||||| |||||||||||| || |||||  |||| ||||||| |||||||||||||||||||||||    
T  39209477 ttaaaatcatttttctctctctatcactattaca-tttttct-aataagtgtgaaatgagcaaaag 39209414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 3e-38; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 413 - 566
Target Start/End: Complemental strand, 15371943 - 15371791
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| | || | ||||||||||||||||| |||||||||    
T  15371943 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataa-gacactcaaaaccatttttctctcgctttcactt 15371845  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    ||||||||||||||||||| |||||||||| | || || |||||||||||||||    
T  15371844 atacactttttcttaataattgtgaaatgaaccaagggctcagttaaaatggga 15371791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 15325180 - 15325337
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||| ||| ||||||||||||| ||||| | ||||||| || ||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  15325180 caatccaatatattctactttgcatttacgataaagaagaacacaccaatagttgataa-ggcattcaaaaccaattttctctctctttcacttatacac 15325278  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||| |||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  15325279 tttttcttaataattgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 15325337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 15321299 - 15321153
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||  ||||||||||| |||| | || | ||||||| ||||||||| |||||| ||||||||    
T  15321299 caattcaatatattctactttgcatttatgataaagaagaacgcaccaatagtttataa-gacactgaaaaccaattttctctctctttcagttatacac 15321201  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    ||||||||||||| |||||||| ||| || || |||||||||||||||    
T  15321200 tttttcttaataattgtgaaataagccaagggatcagttaaaatggga 15321153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 564
Target Start/End: Original strand, 15355608 - 15355752
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | ||||||| |||||||||  ||||||||||||||    
T  15355608 caattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataa-gacactcaaaaccaattttctctctttttcacttatacac 15355706  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 564  Q
    ||||||||||||| ||| |||||| | ||  | |||||||||||||    
T  15355707 tttttcttaataattgtaaaatgaaccaagagctcagttaaaatgg 15355752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 34803781 - 34803621
Alignment:
Q  419 caattcaacatattctactttgtatttatgcta--aagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 516  Q
    |||||||| ||||| || |||| ||||||| ||  ||||  ||| || ||||||||||||||| || | ||||||||||| ||||| |||||  ||||||    
T  34803781 caattcaatatattttattttgcatttatgatataaagaggaatgcatcaatagttgataaagacactcaaaaccattttcctctctctttcctttatac 34803682  T
Q  517 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||||||||| || || ||| ||||||||||| ||||| ||||    
T  34803681 actttttcttaataagtgtgaaatgagctaagggctcaattaaaatgggacggagggagta 34803621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 418 - 577
Target Start/End: Complemental strand, 33921544 - 33921386
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||  || | ||||||||||||||||| | |||||| ||| |    
T  33921544 ccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttttctctctccttcactaatata 33921445  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
     |||||||||||||||| |||||||||||| || ||||||||||||||| ||||| ||||    
T  33921444 -tttttcttaataagtgcgaaatgagcaaatggctcagttaaaatgggacggagggagta 33921386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 419 - 566
Target Start/End: Complemental strand, 15351457 - 15351311
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||| ||| ||||||| ||||||| ||  || ||||||||||||| |||| | |||| || ||||||||| | ||||||||||||     
T  15351457 caattcaatatattctaccttgcatttatgataaagaagaacgcatcaatagttgataa-ggcactaaaaatcaattttctctctcattcacttatacat 15351359  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    ||||||||||||| |||||||||||  || | |||| |||||||||||    
T  15351358 tttttcttaataattgtgaaatgagtcaaggattcaattaaaatggga 15351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 3166180 - 3166078
Alignment:
Q  421 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 520  Q
    |||||| ||||||||||||  ||||||| |||||||||||||| ||||| ||| ||||| || | ||||| ||||||||||| |||||| ||||||||||    
T  3166180 attcaatatattctactttacatttatgataaagaaaaatacatcaatacttgttaaagacactcaaaactatttttctctctctttcatttatacactt 3166081  T
Q  521 ttt 523  Q
    |||    
T  3166080 ttt 3166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 564
Target Start/End: Complemental strand, 31076005 - 31075854
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| ||||| || |||||||||||| |||  |  ||| ||||||||||||| |||| || | || |||||||||||||| ||||||||    
T  31076005 tcactcccaattcaatatattatattttgtatttatgataagaaggaatgcaccaatagttga-aaagacactcaataccatttttctctctctttcact 31075907  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 564  Q
    | |||| |||||||||||  | ||||||||| ||||| | ||| |||||||||    
T  31075906 tgtacattttttcttaatgtgggtgaaatgaacaaaatgatcacttaaaatgg 31075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 523
Target Start/End: Complemental strand, 3874123 - 3874020
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| |||||| |||||  ||||||| ||||||| ||| |||||||| |||| |||| || | |||| ||||||| |||| |||||| |||||||||    
T  3874123 aattcaatatattcaactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacact 3874024  T
Q  520 tttt 523  Q
    ||||    
T  3874023 tttt 3874020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 544
Target Start/End: Original strand, 4552936 - 4553059
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttc-act 511  Q
    |||| |||||| || |||||||| |||| ||||||| ||||||| ||| |||||||||||         | | ||||||||||||||||| ||||  |||    
T  4552936 cactcccaatttaatatattctaatttgcatttatgataaagaagaatgcaccaatagtt---------actcaaaaccatttttctctctctttttact 4553026  T
Q  512 tatacactttttcttaataagtgtgaaatgagc 544  Q
    ||||||  |||||||||||||||||||||||||    
T  4553027 tatacatattttcttaataagtgtgaaatgagc 4553059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 16126318 - 16126402
Alignment:
Q  493 tttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||| |||| ||||| ||| ||||||||||||||||| ||||||||||| |||||   |||||||||||| || ||||| ||||    
T  16126318 tttttttctctctttcgcttttacactttttcttaatacgtgtgaaatgaacaaaatagtcagttaaaatgagacggagggagta 16126402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 542
Target Start/End: Complemental strand, 3604679 - 3604552
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| |||||| |||||| |||||   ||| | | ||| |||||||| || | ||  | | ||||||||||||||||||| |||| | |||    
T  3604679 acttccaattcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccatttttctctctcttttattta 3604580  T
Q  514 tacactttttcttaataagtgtgaaatga 542  Q
    |||| ||| |||||||| |||||||||||    
T  3604579 taca-tttgtcttaatatgtgtgaaatga 3604552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 15081521 - 15081580
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||||    
T  15081521 ttaaaactatttttctctcaccttcatttataca-tttttcttaatacgtgtgaaatgagc 15081580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 544
Target Start/End: Original strand, 33109467 - 33109530
Alignment:
Q  480 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    ||||||||||| ||||||||||| | ||||  |||||| |||||||||||| |||||||||||||    
T  33109467 gcatttaaaactatttttctctctcattcatctataca-tttttcttaatacgtgtgaaatgagc 33109530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 528
Target Start/End: Original strand, 20027637 - 20027724
Alignment:
Q  441 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaa 528  Q
    |||||||| ||||||| ||| |||||||| || | |||| || | |||| |||||| || |  |||||||||||||||||||||||||    
T  20027637 tatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaatcattttgctatttctttcacttatacactttttcttaa 20027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 481 - 547
Target Start/End: Complemental strand, 7739530 - 7739465
Alignment:
Q  481 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||| |||| |||||||| || |||||||||||||| ||||||||| ||  |||||||||||||||    
T  7739530 cattttaaactatttttctatctctttcacttataca-tttttcttattacatgtgaaatgagcaaa 7739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 486 - 572
Target Start/End: Original strand, 20383944 - 20384030
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 572  Q
    |||||||||||| |||| |||||||||| | || ||||||||||| |||| ||| || ||||| ||||| | | ||||||| |||||    
T  20383944 aaaaccatttttttctctctttcacttacataccttttcttaatatgtgttaaaggaacaaaaagttcactaataatgggatggagg 20384030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 540
Target Start/End: Original strand, 31265807 - 31265932
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| |||||| |||||  ||||||| ||  | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| | |||| |||    
T  31265807 acttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactatttttctctctccttcattta 31265906  T
Q  514 tacactttttcttaataagtgtgaaat 540  Q
    |||| ||| |||||||| |||||||||    
T  31265907 taca-tttgtcttaatatgtgtgaaat 31265932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 413 - 479
Target Start/End: Complemental strand, 33018024 - 33017958
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaag 479  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||||    
T  33018024 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaag 33017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 413 - 577
Target Start/End: Original strand, 32776010 - 32776174
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || | ||||||| | ||||||||||||||||| | |||||||    
T  32776010 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcactt 32776109  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||| ||||| | ||||| ||||    
T  32776110 atacactttttcttaatatgtgtgaaatgagcaaaaggctcatttataatggaacggagggagta 32776174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 418 - 577
Target Start/End: Complemental strand, 29997104 - 29996945
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    |||| |||| ||||| ||||||| ||||||| ||||||| ||| |||||||| || | || | |||| |||||||||||||| || ||||||||||||||    
T  29997104 ccaactcaatatattatactttgcatttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccatttttctttctctttcacttataca 29997005  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| ||| ||||||||||    
T  29997004 ctttttcttaataagtgtgaaatgagtcaaaggctcagttaaaataggacggaggaagta 29996945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 423 - 573
Target Start/End: Original strand, 47238254 - 47238404
Alignment:
Q  423 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 522  Q
    ||||||| || ||||||| ||||||| ||||||| ||| ||||||| |||||||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  47238254 tcaacattttgtactttgcatttatgataaagaagaatgcaccaattgttgataagggcactcaaaaccatttttctctctctttcacttatacactttt 47238353  T
Q  523 tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagga 573  Q
    |||||||||||||||||||||| || |  || |||||||||| | ||||||    
T  47238354 tcttaataagtgtgaaatgagccaatgactcggttaaaatggaacggagga 47238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 413 - 577
Target Start/End: Original strand, 37264340 - 37264502
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||  ||| || ||||| |||| || |||| | |||||||||||||||||  ||||||||    
T  37264340 cactcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctc--tttcactt 37264437  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||| ||||    
T  37264438 atatactttttcttaatatgtgtgaaatgagcaaaaggctcacttaaaatgggacggagggagta 37264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 419 - 543
Target Start/End: Complemental strand, 32972092 - 32971968
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| |||||||  ||| || ||| |||||||||||||||| |||| | ||||||||||||||||| ||||||||||||||     
T  32972092 caattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttatacat 32971993  T
Q  519 tttttcttaataagtgtgaaatgag 543  Q
    |||||||||||||||||||||||||    
T  32971992 tttttcttaataagtgtgaaatgag 32971968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 423 - 543
Target Start/End: Complemental strand, 23111159 - 23111039
Alignment:
Q  423 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 522  Q
    |||| ||||||||||||  ||||||| ||||||| ||| |||||||||||||||||| |||| |||| ||||||||||||  ||||| ||||||| ||||    
T  23111159 tcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataaagacattcaaaatcatttttctctctatttcatttatacattttt 23111060  T
Q  523 tcttaataagtgtgaaatgag 543  Q
    ||||||||||| |||||||||    
T  23111059 tcttaataagtatgaaatgag 23111039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 10355809 - 10355701
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| |||||| |||| |||||||||||||||| | || | |||||||||||| |||| ||| |||||||||||    
T  10355809 caattcaatatattctactttgcatttatgataaagagaaatgcaccaatagttgataaggacactcaaaaccatttttttctctcttacacttatacac 10355710  T
Q  519 tttttctta 527  Q
    |||||||||    
T  10355709 tttttctta 10355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 413 - 509
Target Start/End: Original strand, 38589761 - 38589857
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttca 509  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  38589761 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataagggcattcaaaaccatttttctctctctttca 38589857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 428 - 563
Target Start/End: Original strand, 8150001 - 8150135
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    |||||||||||||  |||||| ||| | ||||| ||| |||| |||| |||  || ||||||||||||||||||| |||||||||||||| |||||||||    
T  8150001 atattctactttgattttatgataatggaaaatgcacaaatatttgacaaaa-cacttaaaaccatttttctctctctttcacttatacattttttctta 8150099  T
Q  528 ataagtgtgaaatgagcaaaaggttcagttaaaatg 563  Q
    ||| ||||||||||| || ||| |||| ||| ||||    
T  8150100 atatgtgtgaaatgaacacaagattcatttataatg 8150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 45218233 - 45218111
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||||||| |||||  |||||||    
T  45218233 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttcctttataca 45218134  T
Q  518 ctttttcttaataagtgtgaaatg 541  Q
    | ||||||||||  ||||||||||    
T  45218133 c-ttttcttaatttgtgtgaaatg 45218111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 419 - 541
Target Start/End: Original strand, 2849288 - 2849409
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| ||   ||||| ||||||||||| |||||| |||||||     
T  2849288 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctctctttcatttataca- 2849386  T
Q  519 tttttcttaataagtgtgaaatg 541  Q
    |||||||||||| ||||||||||    
T  2849387 tttttcttaatatgtgtgaaatg 2849409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 486 - 572
Target Start/End: Complemental strand, 33774051 - 33773965
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 572  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||   ||| ||||||||||||||||| |||||    
T  33774051 aaaactatttttctctctctttcacttatacactttttcttaatatatgtgaaatgaattaaaagttcagttaaaatgggacggagg 33773965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 548
Target Start/End: Original strand, 43007927 - 43008057
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac-a 517  Q
    |||||||| |||||||| |||  ||||||| ||||||||||| ||| |||| |||| |||| || | ||||| ||||||| ||| |||||||||||||      
T  43007927 caattcaatatattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttttccctctctttcacttatacgt 43008026  T
Q  518 ctttttcttaataagtgtgaaatgagcaaaa 548  Q
     |||||||||| | |||||||||||||||||    
T  43008027 ttttttcttaacatgtgtgaaatgagcaaaa 43008057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 413 - 541
Target Start/End: Complemental strand, 30659560 - 30659433
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||| ||||||| |||||||||||| |||||||| ||||||| ||  ||| |||| |||| ||||||| | ||||| ||||||||||| |||||  ||    
T  30659560 cacttcaaattcaatatattctactttatatttatgataaagaagaacgcacaaatatttgacaaaggcactcaaaactatttttctctctctttccttt 30659461  T
Q  513 atacactttttcttaataagtgtgaaatg 541  Q
     ||||| ||||||||||  ||||||||||    
T  30659460 gtacac-ttttcttaatctgtgtgaaatg 30659433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 419 - 542
Target Start/End: Original strand, 9602894 - 9603017
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| || |||||||||| ||||||| |||| || ||| || |||||||| | ||  ||||| ||| | |||||| |||| ||| ||||||| |||    
T  9602894 caattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccacttatgcac 9602993  T
Q  519 tttttcttaataagtgtgaaatga 542  Q
    ||||| ||||||||||||||||||    
T  9602994 ttttttttaataagtgtgaaatga 9603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 419 - 542
Target Start/End: Original strand, 9830465 - 9830588
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| || |||||||||| ||||||| |||| || ||| || |||||||| | ||  ||||| ||| | |||||| |||| ||| ||||||| |||    
T  9830465 caattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccacttatgcac 9830564  T
Q  519 tttttcttaataagtgtgaaatga 542  Q
    ||||| ||||||||||||||||||    
T  9830565 ttttttttaataagtgtgaaatga 9830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 34064248 - 34064405
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| |||  || ||| |||||||| || | || | || | ||||| |||||||||||  ||||| ||||||||    
T  34064248 caattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaa-gacactcaaaactatttttctctctatttcatttatacac 34064346  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||| |||||| |||||||| ||  |||||| |||| ||||| |||||||||| ||||    
T  34064347 ttttttttaatatgtgtgaaaagaaaaaaaggctcagataaaacgggagggagggagta 34064405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 435 - 548
Target Start/End: Original strand, 6697130 - 6697242
Alignment:
Q  435 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtg 534  Q
    |||||| ||||||| ||| ||||||| ||||||||   || |||  || ||||||  ||||||||||  |||||||||||||| ||||||||||||||||    
T  6697130 actttgcatttatgataatgaaaaatgcaccaatacacgacaaaa-cacttaaaattatttttctctttctttcacttatacattttttcttaataagtg 6697228  T
Q  535 tgaaatgagcaaaa 548  Q
    |||||||| |||||    
T  6697229 tgaaatgaacaaaa 6697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 428 - 544
Target Start/End: Original strand, 21446478 - 21446594
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 527  Q
    ||||| |||||| |||||||| |||| || ||| ||| |||| || |||| | || | ||||  ||||||||||| |||||||||||||| |||||||||    
T  21446478 atattatactttatatttatgataaaaaagaatgcactaataattaataaggacactcaaaattatttttctctctctttcacttatacaatttttctta 21446577  T
Q  528 ataagtgtgaaatgagc 544  Q
    |||||| | ||||||||    
T  21446578 ataagtataaaatgagc 21446594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 487 - 566
Target Start/End: Complemental strand, 39143680 - 39143601
Alignment:
Q  487 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    |||||||| |||||||  |||||| ||||||||||||||| ||| ||||||||||||||||||  ||| ||| |||||||    
T  39143680 aaaccattattctctctatttcacatatacactttttctttatacgtgtgaaatgagcaaaagactcacttataatggga 39143601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 584
Target Start/End: Original strand, 27621913 - 27622035
Alignment:
Q  462 caccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaa 561  Q
    |||||||| ||||||| || | | |||| ||||||||| || ||||   ||||||| |||||||||||||||||||||||||  ||  | ||| ||||||    
T  27621913 caccaataattgataagggtactcaaaatcatttttctttctcttttcattatacattttttcttaataagtgtgaaatgagttaagagctcaattaaaa 27622012  T
Q  562 tgggagggaggaagtactttttt 584  Q
    ||||| ||||| |||| ||||||    
T  27622013 tgggacggagggagtagtttttt 27622035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 529
Target Start/End: Original strand, 36070138 - 36070247
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||  ||||||||||||   |||||| ||||||| ||| |||||||| |||| |||| || | ||||||||||| ||||| |||||| |||||||     
T  36070138 caattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctctctttcatttataca- 36070236  T
Q  519 tttttcttaat 529  Q
    |||||||||||    
T  36070237 tttttcttaat 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 9658937 - 9658993
Alignment:
Q  486 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||||||    
T  9658937 aaaaccatttttctctctctttcgcttgtacattttttcttaatatgtgtgaaatga 9658993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 11616660 - 11616733
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    ||||||||||||||||||| | |||| |||||||  |||| |||||| |||||||||||||||| || ||||||||    
T  11616660 ttaaaaccatttttctctctccttcatttataca--tttttttaatatgtgtgaaatgagcaaatggctcagttaa 11616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 18731466 - 18731550
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccattttt 497  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| ||||||||| || | ||||| ||||||    
T  18731466 cacttccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttgataaagacactcaaaacgattttt 18731550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 547
Target Start/End: Complemental strand, 45890888 - 45890805
Alignment:
Q  463 accaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||| || | ||| ||||||||||||||||||||||| | |||  ||||||| |||||||||||| ||||||||||| ||||    
T  45890888 accaatacttaacaaaagcatttaaaaccatttttctctctccttcttttataca-tttttcttaatacgtgtgaaatgaacaaa 45890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 420 - 522
Target Start/End: Complemental strand, 39343744 - 39343644
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||||||| |||| |||| ||| ||| | ||||| ||| ||||||  |||||| |||||||||    
T  39343744 aattcaatatattctactttacatttatgataaagaagaatacacaaatacttgacaaatgcactcaaaacgattgttctct--ctttcatttatacact 39343647  T
Q  520 ttt 522  Q
    |||    
T  39343646 ttt 39343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 542
Target Start/End: Complemental strand, 5724724 - 5724660
Alignment:
Q  477 aaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 542  Q
    |||||| ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||    
T  5724724 aaggcacttaaaactatttttctctctccttcatttataca-tttttcttaatacgtgtgaaatga 5724660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 542
Target Start/End: Complemental strand, 7425957 - 7425829
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaagg-catttaaaaccatttttctctccctttcactt 512  Q
    ||||||||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| || |  |||  || ||||||||||||||||||| | |||| ||    
T  7425957 acttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcattt 7425858  T
Q  513 atacactttttcttaataagtgtgaaatga 542  Q
    ||||| ||| |||||||| |||||||||||    
T  7425857 ataca-tttgtcttaatacgtgtgaaatga 7425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 549
Target Start/End: Complemental strand, 36194684 - 36194599
Alignment:
Q  465 caatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt-tttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||| || |||||||||||||||||||||||||| || |  ||| ||||||| || |||||||| || ||||||||||| |||||    
T  36194684 caataattaataaaggcatttaaaaccatttttctttctcgctcatttatacatttctttcttaacaaatgtgaaatgagtaaaag 36194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 539
Target Start/End: Complemental strand, 3667951 - 3667832
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| |||  || ||| ||| |||| ||||||| | || | ||||  ||||||||||   ||||||||||||||    
T  3667951 caattcaatatattctactttacatttatgataagaaataatgcactaatacttgataa-gacactcaaaattatttttctctttttttcacttatacac 3667853  T
Q  519 tttttcttaataagtgtgaaa 539  Q
    | |||||||||| ||||||||    
T  3667852 tatttcttaatatgtgtgaaa 3667832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 13590918 - 13590862
Alignment:
Q  646 catgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaa 702  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||| || | |||||||    
T  13590918 catgatttcgtcaatctggtccttagagaaattagcataacaataatcagaaacaaa 13590862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 800
Target Start/End: Complemental strand, 13590735 - 13590644
Alignment:
Q  709 actaattatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaaaccgaaaagtaacacactgacttca 800  Q
    |||||| |||||||||| |||||| |||  |||||| |  ||||||||| ||| ||| || ||||||||| || ||||||||||||| ||||    
T  13590735 actaatcatgaattttcaaattacatctataaaactatacaaatttgagcatttttaccactgagaaaccaaatagtaacacactgaattca 13590644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 502
Target Start/End: Original strand, 24288456 - 24288539
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc 502  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| ||| |||| |||| ||||||| | ||||| |||| ||||||    
T  24288456 caattcaatatattctactttacatttatgataaagaagaatgcacaaatacttgaaaaaggcactcaaaactatttatctctc 24288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 29257573 - 29257707
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | |||||| ||||||| || | ||  ||| |||||||||||||| ||||   |||| |    
T  29257573 tcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatt 29257672  T
Q  512 tatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||| ||| |||||||| ||||||  ||||||||    
T  29257673 tataca-tttgtcttaatatgtgtgatttgagcaaa 29257707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 542
Target Start/End: Complemental strand, 37490692 - 37490570
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| || | |||  || |||||| |||||||||||| | |||| |||||||     
T  37490692 caattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttataca- 37490594  T
Q  519 tttttcttaataagtgtgaaatga 542  Q
    |||||||||| | |||||||||||    
T  37490593 tttttcttaacatgtgtgaaatga 37490570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 549
Target Start/End: Original strand, 39498768 - 39498838
Alignment:
Q  481 catttaaaaccatttttctctccctttcacttatacact--ttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||||||||| ||||||||||| | |||||| ||||  |  |||| |||||||||||||||||||||||||    
T  39498768 catttaaaactatttttctctctcattcactaatactatattttttttaataagtgtgaaatgagcaaaag 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 559
Target Start/End: Complemental strand, 44604487 - 44604413
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||| |||||||||||| | |||| ||||||| ||| |||||||| ||||||  |||||||| |||||||||||    
T  44604487 ttaaaatcatttttctctctccttcatttataca-tttgtcttaatatgtgtgatttgagcaaatggttcagttaa 44604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 497 - 535
Target Start/End: Complemental strand, 37496392 - 37496354
Alignment:
Q  497 tctctccctttcacttatacactttttcttaataagtgt 535  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  37496392 tctctctctttcacttatacactttttcttaatatgtgt 37496354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 541
Target Start/End: Original strand, 23058916 - 23058972
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 541  Q
    ||||||| ||||||||||| |||||| ||||| | |||||||||||| ||||||||||    
T  23058916 ttaaaactatttttctctctctttcatttatata-tttttcttaatacgtgtgaaatg 23058972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 31549597 - 31549556
Alignment:
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  31549597 tttttcttaataagtgtaaaatgagcaaaagactcagttaaa 31549556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 33584589 - 33584694
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| | |||| ||||||| ||  | | |||||||||||| || | ||  ||| ||||||||||||||||||| | |||| |    
T  33584589 tcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatagcacttaaaaccatttttctctctccttcatt 33584688  T
Q  512 tataca 517  Q
    ||||||    
T  33584689 tataca 33584694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 544
Target Start/End: Complemental strand, 49100509 - 49100453
Alignment:
Q  487 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 544  Q
    |||| ||||||||||  |||||| ||||||| |||||||||||| |||||||||||||    
T  49100509 aaactatttttctctgtctttcatttataca-tttttcttaatacgtgtgaaatgagc 49100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 7e-36; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 420 - 577
Target Start/End: Complemental strand, 5147570 - 5147413
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | |||| |||||||||||  |||||||||||| | |    
T  5147570 aattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatatatt 5147471  T
Q  520 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||| ||||| ||||    
T  5147470 ttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagggagta 5147413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 419 - 577
Target Start/End: Original strand, 38978937 - 38979095
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    ||||| || ||||||||||||| ||||||| ||||||  |||  |||||||||| |||| |||| | |||||||||||||| || ||||| ||| |||||    
T  38978937 caatttaatatattctactttgcatttatgataaagaggaatgtaccaatagttaataagggcactcaaaaccatttttctatctctttcccttgtacac 38979036  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| ||||    
T  38979037 tttttcttaataagtgtgaaatgagtaaatggctcagttaaaatgggacggagggagta 38979095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 413 - 560
Target Start/End: Complemental strand, 13016444 - 13016298
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||| || | |||||||||||||||| | || | |||  |||||||||||| |||||||||    
T  13016444 cactcccaattcaatatattctactttgcatttatgataaagagaa-tgcaccaatagttgataaggacactcaaactcatttttctctctctttcactt 13016346  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
     ||||||||||||||||||||||||||||||| || |||||| |||||    
T  13016345 ttacactttttcttaataagtgtgaaatgagccaagggttcaattaaa 13016298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 419 - 577
Target Start/End: Complemental strand, 15564963 - 15564810
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    ||||| || ||||||||||||| ||||||| ||||     || |||||||||||||||| || | | ||||  ||||||||||| |||||||||||||||    
T  15564963 caatttaatatattctactttgcatttatgataaa-----atgcaccaatagttgataagggtactcaaaattatttttctctctctttcacttatacac 15564869  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||||||||||||||||| ||||  |||| |||||||||| ||||||||||    
T  15564868 tttttcttaataagtgtgaaatgagcgaaagactcagctaaaatgggatggaggaagta 15564810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 419 - 560
Target Start/End: Complemental strand, 13087816 - 13087676
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||| ||||||| |||||| || | |||||||||||||||| | || | |||  |||||||||||| ||||||||| |||||    
T  13087816 caattcaatatattctactttgcatttatgataaagagaa-tgcaccaatagttgataaggacactcaaactcatttttctctctctttcacttttacac 13087718  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 560  Q
    |||||||||||||||||||||||||| || |||||| |||||    
T  13087717 tttttcttaataagtgtgaaatgagccaagggttcaattaaa 13087676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 413 - 579
Target Start/End: Complemental strand, 5357898 - 5357733
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || | ||||||||||||||||| | ||||||     
T  5357898 cacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatttttctctctccttcacta 5357799  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 579  Q
    ||| | |||||||||||||||||| |||||||||| |||||| ||||| ||||| ||||| ||||||    
T  5357798 atata-tttttcttaataagtgtgtaatgagcaaatggttcaattaaattgggacggagggagtact 5357733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 421 - 543
Target Start/End: Original strand, 42818938 - 42819060
Alignment:
Q  421 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 520  Q
    |||||| ||||||||||||  ||||||| ||||||| ||| |||||||  || |||| |||| | |||||||||||||| || |||| ||||||||||||    
T  42818938 attcaatatattctactttacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccatttttctttctcttttacttatacactt 42819037  T
Q  521 tttcttaataagtgtgaaatgag 543  Q
    |||||||||||||||||||||||    
T  42819038 tttcttaataagtgtgaaatgag 42819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 429 - 565
Target Start/End: Original strand, 4194975 - 4195112
Alignment:
Q  429 tattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac-tttttctta 527  Q
    |||||||||||  ||||||| ||||||| ||| || |||||||| |||| |||| | ||||||||||||||||| |||| |||||||||| |||||||||    
T  4194975 tattctacttttcatttatgataaagaagaatgcatcaatagttcataagggcactcaaaaccatttttctctctcttttacttatacacttttttctta 4195074  T
Q  528 ataagtgtgaaatgagcaaaaggttcagttaaaatggg 565  Q
    |||||||||||||| |  || || ||||||||||||||    
T  4195075 ataagtgtgaaatgcgtcaagggctcagttaaaatggg 4195112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 564
Target Start/End: Original strand, 31090337 - 31090482
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||| | |||||||||||||  |||||| ||||||| ||| |||||||||||||||| |||| | |||| ||||||||||||  |||||||||||||     
T  31090337 caattccatatattctactttgcgtttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctctctttttcacttatacat 31090436  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 564  Q
    ||||||||||||| ||| |||||||  || |  |||||||||||||    
T  31090437 tttttcttaataaatgtaaaatgagtcaaggactcagttaaaatgg 31090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 414 - 577
Target Start/End: Complemental strand, 16926171 - 16926006
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || |  |||||| | ||||||||||||||| | ||||||||||    
T  16926171 acttccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcactta 16926072  T
Q  514 ---tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
       ||||||| || |||||| ||||||||||||||||||| ||| ||| ||||||| ||||| ||||    
T  16926071 tactacacttctt-ttaatatgtgtgaaatgagcaaaagggtcaattataatgggacggagggagta 16926006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 413 - 577
Target Start/End: Complemental strand, 39060503 - 39060340
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||| ||| ||| ||||||||| ||||||| ||||||| |||  ||||||| || | ||| ||| | ||||||||||||||||| | ||||||     
T  39060503 cacttccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctctccttcacta 39060404  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||| | ||||||||||||||||||||||||||||| |||||| ||||| ||| | ||||| ||||    
T  39060403 atata-tttttcttaataagtgtgaaatgagcaaatggttcaattaaattggaacggagggagta 39060340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 566
Target Start/End: Complemental strand, 25111229 - 25111078
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| |||| || | ||||| ||||||||||  |||||||||    
T  25111229 cacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctct--ctttcactt 25111132  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
     ||| | ||||||||||| ||||||||||||||||| | ||| ||| |||||||    
T  25111131 ttactccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatggga 25111078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 566
Target Start/End: Complemental strand, 25170320 - 25170169
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| |||| || | ||||| ||||||||||  |||||||||    
T  25170320 cacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctct--ctttcactt 25170223  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
     ||| | ||||||||||| ||||||||||||||||| | ||| ||| |||||||    
T  25170222 ttactccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatggga 25170169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 579
Target Start/End: Original strand, 31196352 - 31196512
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||| ||| ||||||||||||| || |||  ||||||||||| || |||||  ||| || | || | ||||| |||||||| || |||||| |||||||     
T  31196352 caatccaatatattctactttgcatgtataataaagaaaaatgcagcaataaatgacaaggacactcaaaactatttttctatctctttcatttatacat 31196451  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 579  Q
     ||||||||||||||||||||||||| ||   |||||||||||||||| ||||||||||||    
T  31196452 attttcttaataagtgtgaaatgagccaagaattcagttaaaatgggacggaggaagtact 31196512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 412 - 543
Target Start/End: Complemental strand, 11099559 - 11099429
Alignment:
Q  412 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 511  Q
    ||||| ||||||||| |||||| |||||||||||||| ||  | | ||| |||||||| || | |||  || ||||||| ||||||||||| |||||| |    
T  11099559 tcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcatt 11099460  T
Q  512 tatacactttttcttaataagtgtgaaatgag 543  Q
    |||||| |||||||||||| ||||||||||||    
T  11099459 tataca-tttttcttaatatgtgtgaaatgag 11099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 566
Target Start/End: Original strand, 25108600 - 25108751
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||| || | |||| || | ||||| ||||||||||  |||||||||    
T  25108600 cacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctct--ctttcactt 25108697  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
     ||| | ||||||||||| |||||||||||| |||| | ||| ||| |||||||    
T  25108698 ttactccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatggga 25108751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 566
Target Start/End: Original strand, 25167692 - 25167843
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||| || | |||| || | ||||| ||||||||||  |||||||||    
T  25167692 cacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctct--ctttcactt 25167789  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
     ||| | ||||||||||| |||||||||||| |||| | ||| ||| |||||||    
T  25167790 ttactccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatggga 25167843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 420 - 577
Target Start/End: Complemental strand, 39061028 - 39060868
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac--- 516  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||| ||| | | ||||| || | || | |||  |||||||||||| |||||||||||||       
T  39061028 aattcaatatattctactttgcatttatgataaagaagaatgcactagtggttgacaaggacactcaaactcatttttctctctctttcacttatactac 39060929  T
Q  517 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    | |||||||||||||||||||||||||  ||||  | | ||||||||||| ||||| ||||    
T  39060928 attttttcttaataagtgtgaaatgagtcaaagtctaaattaaaatgggacggagggagta 39060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 419 - 516
Target Start/End: Original strand, 15898224 - 15898321
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 516  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| || |||||||| |||| | || |||||  |||||||||||| |||||||||||||    
T  15898224 caattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaactcatttttctctctctttcacttatac 15898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 7871344 - 7871405
Alignment:
Q  417 tccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaa 478  Q
    ||||||| || ||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  7871344 tccaatttaatatattctactttacatttatgataaagaaaaatacaccaatagttgataaa 7871405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 413 - 561
Target Start/End: Original strand, 35988661 - 35988808
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||| ||||||||| |||||| |||||| ||||||| |||  |  ||| |||||||| |||| ||   || ||||||| |||||||||||  ||||||||    
T  35988661 cactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaaca-cacttaaaactatttttctctctgtttcactt 35988759  T
Q  513 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaa 561  Q
    ||| | ||||||||||||  ||||||||||  |||||||||| ||||||    
T  35988760 ataaattttttcttaatatatgtgaaatgaaaaaaaggttcatttaaaa 35988808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 414 - 542
Target Start/End: Complemental strand, 42575718 - 42575591
Alignment:
Q  414 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 513  Q
    ||||||||||||| |||||| |||||| ||||||| ||  | | |||||||||||| ||   ||  ||| ||||||||||||||||||| | |||| |||    
T  42575718 acttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcacttaaaaccatttttctctctcattcattta 42575619  T
Q  514 tacactttttcttaataagtgtgaaatga 542  Q
    |||| ||| |||||||| |||||||||||    
T  42575618 taca-tttgtcttaatatgtgtgaaatga 42575591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 4044553 - 4044433
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||| ||||| |||| | ||||| | | | ||||| |||||||    
T  4044553 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcattcaaaatc-ttttttttttcttttcatttataca 4044455  T
Q  518 ctttttcttaataagtgtgaaat 540  Q
    | ||||||||||  |||||||||    
T  4044454 c-ttttcttaatctgtgtgaaat 4044433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 549
Target Start/End: Complemental strand, 6173055 - 6172926
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||| ||||||| ||||||| ||| |  |||| ||  |||| |||||||  ||| ||||||| |||||| ||||   |||||| |||||     
T  6173055 caattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcacttaaaactatttttatctcttcttcactaataca- 6172957  T
Q  519 tttttcttaataagtgtgaaatgagcaaaag 549  Q
    ||||||||||||||||||||||||| |||||    
T  6172956 tttttcttaataagtgtgaaatgaggaaaag 6172926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 549
Target Start/End: Complemental strand, 7311254 - 7311128
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||| ||||||| ||| |  |||| ||| |||| |||||||  ||| ||||||||||||||||||  |||| | | ||||| |    
T  7311254 aattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctct--cttttattaataca-t 7311158  T
Q  520 ttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||||||||||||| |||||| || |||||    
T  7311157 ttttcttaataagtatgaaatcagtaaaag 7311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 541
Target Start/End: Complemental strand, 36006973 - 36006849
Alignment:
Q  413 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 512  Q
    |||||||||||||  ||||||||||||  ||||||| ||||||| ||| ||| |||| |||| |||| || ||||||||||||   |||| |||| | ||    
T  36006973 cacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccattt---tctctcttttattt 36006877  T
Q  513 atacactttttcttaataagtgtgaaatg 541  Q
    ||||| |||||||||||  ||||||||||    
T  36006876 ataca-tttttcttaatctgtgtgaaatg 36006849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 499 - 572
Target Start/End: Complemental strand, 6629391 - 6629318
Alignment:
Q  499 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 572  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||  |||||| |||| |||||||||| |||||    
T  6629391 tctctctttcatttatacactttttcttaatatgtgtgaaaagaaaaaaaggctcagataaaatgggacggagg 6629318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 423 - 577
Target Start/End: Original strand, 35666922 - 35667073
Alignment:
Q  423 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 522  Q
    |||| ||||||||||||||||||||  ||| |  |||| |||||||| || | ||| ||| ||||||| ||||||||||||  |||| | ||| | ||||    
T  35666922 tcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatttttctctcc--ttcaataata-aatttt 35667018  T
Q  523 tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    ||||||||| |||||||||||  ||||  ||| ||||| |||||| |||| ||||    
T  35667019 tcttaataaatgtgaaatgagtgaaagactcacttaaattgggagagagggagta 35667073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 22983076 - 22983134
Alignment:
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||||||||||| ||||||||||| ||||| ||| ||||||||||||| ||||| ||||    
T  22983076 tttttcttaatatgtgtgaaatgaacaaaatgtttagttaaaatgggacggagggagta 22983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 792095 - 792168
Alignment:
Q  504 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||| |||||||||| | |||||||||  |||||||||||||||| | ||| ||| |||||||| |||||||||    
T  792095 cttttacttatacacatattcttaatatatgtgaaatgagcaaaatgctcacttataatgggagagaggaagta 792168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 547
Target Start/End: Complemental strand, 41594878 - 41594795
Alignment:
Q  463 accaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||| |||| |||  |||||||||  ||||||||||| | |||||||||| | |||||||||||| || |||||||||||||    
T  41594878 accaatacttgacaaaaacatttaaaattatttttctctctcattcacttatata-tttttcttaatatgtatgaaatgagcaaa 41594795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 858433 - 858495
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    |||||||||||||| |||| | || | ||||||| |||||||||||| ||||||||||||||||    
T  858433 ttaaaaccatttttttctctcctttatttataca-tttttcttaatatgtgtgaaatgagcaaa 858495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 3725284 - 3725342
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 543  Q
    ||||||||||||||||||| | |||  ||||||| |||||||||||| ||||||||||||    
T  3725284 ttaaaaccatttttctctctccttcctttataca-tttttcttaatatgtgtgaaatgag 3725342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 15898605 - 15898668
Alignment:
Q  514 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 577  Q
    |||| |||||||||||||||||||||||| | ||||  ||| ||||||||||| ||||| ||||    
T  15898605 tacattttttcttaataagtgtgaaatgaactaaagactcatttaaaatgggacggagggagta 15898668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 543
Target Start/End: Complemental strand, 25344742 - 25344692
Alignment:
Q  492 atttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 543  Q
    ||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  25344742 atttttctctctctttcacttataca-tttttcttagtatgtgtgaaatgag 25344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 531
Target Start/End: Complemental strand, 35012851 - 35012812
Alignment:
Q  492 atttttctctccctttcacttatacactttttcttaataa 531  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  35012851 atttttctttctctttcacttatacactttttcttaataa 35012812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 428 - 523
Target Start/End: Original strand, 35968762 - 35968857
Alignment:
Q  428 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt 523  Q
    |||||||||||| |||||||  ||||||| |||  || |||| |||| |||| || | ||||| |||||||| || |||||| |||||||||||||    
T  35968762 atattctactttatatttataataaagaagaatgtactaatacttgacaaagacactcaaaactatttttctttctctttcatttatacacttttt 35968857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 42211427 - 42211489
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 547  Q
    ||||||||||||||||| | | |||| ||||||| ||||| |||||| ||||||||||||||||    
T  42211427 ttaaaaccatttttctcccaccttcatttatacatttttt-ttaatatgtgtgaaatgagcaaa 42211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 499 - 549
Target Start/End: Complemental strand, 39212550 - 39212500
Alignment:
Q  499 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 549  Q
    |||| |||||||||||||| |||||||||||| | ||||||||| ||||||    
T  39212550 tctctctttcacttatacaatttttcttaatatgcgtgaaatgaacaaaag 39212500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 418 - 547
Target Start/End: Original strand, 33988232 - 33988360
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| |||||| |||||  ||||||| ||  | | |||||||||||| || | |||  || |||||||||||||||| || | |||| |||||||    
T  33988232 ccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttataca 33988331  T
Q  518 ctttttcttaataagtgtgaaatgagcaaa 547  Q
     ||| |||||||| ||||||  ||||||||    
T  33988332 -tttgtcttaatatgtgtgatttgagcaaa 33988360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 564
Target Start/End: Original strand, 598 - 742
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | ||||||| |||||||||  ||||||||||||||    
T  598 caattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataa-gacactcaaaaccaattttctctctttttcacttatacac 696  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 564  Q
    ||||||||||||| ||| |||||| | ||  | |||||||||||||    
T  697 tttttcttaataattgtaaaatgaaccaagagctcagttaaaatgg 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 420 - 566
Target Start/End: Complemental strand, 10864 - 10717
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca-c 518  Q
    ||||||| ||||| ||||||| ||||||| ||||||| |||  ||||||||||||||| | || | ||| ||||||||||||| |||||||||| |||      
T  10864 aattcaatatattttactttgcatttatgataaagaagaatgaaccaatagttgataaggacactcaaacccatttttctctctctttcacttacacatt 10765  T
Q  519 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 566  Q
    ||||||||||||| |||||||||||| || |  |||||||||||||||    
T  10764 tttttcttaataactgtgaaatgagccaatgactcagttaaaatggga 10717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 453 - 577
Target Start/End: Complemental strand, 7960 - 7838
Alignment:
Q  453 agaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggtt 552  Q
    |||||||| ||||||||||||||||||||| | ||||  |||||||||||  ||||| ||||||| ||||||||||||| |||||||||||  || || |    
T  7960 agaaaaatgcaccaatagttgataaaggcactcaaaataatttttctctc--tttcatttatacattttttcttaataaatgtgaaatgagtcaagggct 7863  T
Q  553 cagttaaaatgggagggaggaagta 577  Q
    || ||||||| ||| ||||| ||||    
T  7862 caattaaaataggacggagggagta 7838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 420 - 544
Target Start/End: Complemental strand, 12509 - 12385
Alignment:
Q  420 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 519  Q
    ||||||| ||||||||||||  ||||||  ||||||| ||| ||| |||| |||| |||| || | ||||||||| ||| ||| |||||| ||||||  |    
T  12509 aattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaaagacactcaaaaccattattcactctctttcatttatacgtt 12410  T
Q  520 ttttcttaataagtgtgaaatgagc 544  Q
    ||||||||||| |||||||||||||    
T  12409 ttttcttaatacgtgtgaaatgagc 12385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 98923 - 98997
Alignment:
Q  484 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 559  Q
    |||||| |||||||||||| | |||| ||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  98923 ttaaaatcatttttctctctcattcatttataca-tttttcttaatatgtgtgaaatgaacaaatggttcagttaa 98997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 542
Target Start/End: Complemental strand, 352536 - 352415
Alignment:
Q  418 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 517  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || | |||| || | ||||  ||||||||||  |||| | |||||||    
T  352536 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaattatttttctct--cttttatttataca 352439  T
Q  518 ctttttcttaataagtgtgaaatga 542  Q
    | ||||||||||  |||||||||||    
T  352438 c-ttttcttaatctgtgtgaaatga 352415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 494 - 540
Target Start/End: Original strand, 4438 - 4484
Alignment:
Q  494 ttttctctccctttcacttatacactttttcttaataagtgtgaaat 540  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  4438 ttttctctctcttttacttatacacattttcttaatatgtgtgaaat 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 544
Target Start/End: Complemental strand, 9618 - 9503
Alignment:
Q  427 catattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctt 526  Q
    ||||||| |||||| ||||||| ||| | | ||||||  |||| || | ||  ||| ||||||||||||||||||| | |||| ||||||  ||||||||    
T  9618 catattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccatttttctctctccttcatttatactttttttctt 9519  T
Q  527 aataagtgtgaaatgagc 544  Q
    ||||  ||||||||||||    
T  9518 aata--tgtgaaatgagc 9503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 419 - 540
Target Start/End: Original strand, 5851 - 5969
Alignment:
Q  419 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 518  Q
    |||||||| ||||||||||||  ||||||| ||||||  ||| || ||||| ||||||||| || | || | |||||||||||  |||| | ||||||||    
T  5851 caattcaatatattctactttacatttatgataaagagcaatgcatcaatacttgataaagacactcaagatcatttttctct--cttttatttatacac 5948  T
Q  519 tttttcttaataagtgtgaaat 540  Q
     ||||||||||  |||||||||    
T  5949 -ttttcttaatttgtgtgaaat 5969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 507
Target Start/End: Original strand, 158068 - 158134
Alignment:
Q  441 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctcccttt 507  Q
    ||||||||  |||||| || ||| ||||||||||||| | |||| ||||||||||||||||| ||||    
T  158068 tatttatgacaaagaagaaaacatcaatagttgataaggacattcaaaaccatttttctctctcttt 158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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