View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21272_low_4 (Length: 329)

Name: NF21272_low_4
Description: NF21272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21272_low_4
NF21272_low_4
[»] chr4 (34 HSPs)
chr4 (129-301)||(951345-951520)
chr4 (129-301)||(20034244-20034433)
chr4 (132-301)||(17543722-17543909)
chr4 (132-301)||(47295539-47295725)
chr4 (131-301)||(39345805-39345993)
chr4 (130-301)||(2323741-2323930)
chr4 (132-301)||(45522475-45522661)
chr4 (132-248)||(27869997-27870113)
chr4 (130-248)||(54134508-54134626)
chr4 (132-219)||(32594018-32594105)
chr4 (132-210)||(44341168-44341246)
chr4 (132-219)||(19240744-19240831)
chr4 (133-219)||(1705251-1705337)
chr4 (161-219)||(3415258-3415316)
chr4 (161-247)||(32767585-32767671)
chr4 (244-301)||(7138416-7138473)
chr4 (132-219)||(9455382-9455469)
chr4 (135-246)||(34859078-34859189)
chr4 (132-248)||(34030272-34030387)
chr4 (132-191)||(16029724-16029783)
chr4 (132-241)||(7138493-7138602)
chr4 (161-247)||(43286279-43286365)
chr4 (161-219)||(52464141-52464199)
chr4 (244-296)||(54787480-54787532)
chr4 (132-246)||(56264445-56264559)
chr4 (132-186)||(54787598-54787652)
chr4 (131-246)||(53925305-53925420)
chr4 (269-301)||(54134445-54134477)
chr4 (132-246)||(401399-401513)
chr4 (147-248)||(1324944-1325045)
chr4 (130-159)||(26489214-26489243)
chr4 (132-217)||(41361232-41361317)
chr4 (132-261)||(48152682-48152813)
chr4 (131-171)||(19823760-19823800)
[»] chr7 (15 HSPs)
chr7 (132-301)||(23025136-23025322)
chr7 (132-301)||(1873610-1873796)
chr7 (132-301)||(39493992-39494179)
chr7 (132-248)||(16526162-16526278)
chr7 (161-301)||(10993189-10993347)
chr7 (132-248)||(7505211-7505327)
chr7 (132-248)||(31272135-31272251)
chr7 (132-194)||(41200197-41200259)
chr7 (132-194)||(49112512-49112574)
chr7 (161-246)||(47381498-47381583)
chr7 (132-247)||(35709867-35709982)
chr7 (162-219)||(33604559-33604616)
chr7 (132-172)||(19105789-19105829)
chr7 (131-246)||(37471557-37471672)
chr7 (269-301)||(16526309-16526341)
[»] chr5 (32 HSPs)
chr5 (132-301)||(6955735-6955921)
chr5 (132-301)||(10642003-10642175)
chr5 (132-301)||(38355969-38356155)
chr5 (132-301)||(6238156-6238343)
chr5 (132-301)||(6899866-6900053)
chr5 (132-301)||(21731688-21731874)
chr5 (132-301)||(35038696-35038882)
chr5 (132-301)||(42860259-42860445)
chr5 (132-301)||(24477257-24477444)
chr5 (132-301)||(35838081-35838268)
chr5 (135-301)||(4699873-4700057)
chr5 (161-301)||(9996243-9996400)
chr5 (130-248)||(36016251-36016361)
chr5 (132-184)||(1845416-1845468)
chr5 (132-203)||(20338567-20338638)
chr5 (131-248)||(6452984-6453102)
chr5 (161-247)||(38976263-38976349)
chr5 (132-210)||(37206090-37206168)
chr5 (200-248)||(1845461-1845509)
chr5 (132-245)||(5361206-5361319)
chr5 (128-217)||(74949-75038)
chr5 (161-248)||(33908142-33908229)
chr5 (169-219)||(17085407-17085457)
chr5 (130-171)||(21151838-21151879)
chr5 (130-171)||(21158973-21159014)
chr5 (161-248)||(1398374-1398462)
chr5 (244-296)||(6453115-6453167)
chr5 (131-193)||(40917975-40918037)
chr5 (130-171)||(21162781-21162822)
chr5 (269-301)||(1845540-1845572)
chr5 (131-171)||(18922121-18922161)
chr5 (132-246)||(26264424-26264538)
[»] chr3 (22 HSPs)
chr3 (132-301)||(21075834-21076020)
chr3 (132-301)||(43746229-43746416)
chr3 (132-301)||(46311832-46312018)
chr3 (132-301)||(46219071-46219258)
chr3 (164-301)||(27877532-27877686)
chr3 (17-131)||(45601163-45601277)
chr3 (132-247)||(6888741-6888856)
chr3 (132-245)||(42854312-42854425)
chr3 (132-248)||(43735958-43736073)
chr3 (132-248)||(19975754-19975870)
chr3 (161-247)||(33982994-33983080)
chr3 (130-248)||(2868977-2869095)
chr3 (132-246)||(7910197-7910311)
chr3 (168-219)||(27969482-27969533)
chr3 (132-246)||(41933241-41933355)
chr3 (134-204)||(26844575-26844645)
chr3 (132-246)||(3974771-3974885)
chr3 (132-246)||(3994992-3995106)
chr3 (132-246)||(33911619-33911733)
chr3 (161-219)||(24310804-24310862)
chr3 (130-171)||(49318265-49318306)
chr3 (132-192)||(11486112-11486172)
[»] chr2 (26 HSPs)
chr2 (132-301)||(15560519-15560705)
chr2 (132-301)||(40000740-40000925)
chr2 (130-301)||(29201359-29201547)
chr2 (130-248)||(21747389-21747507)
chr2 (132-248)||(25096278-25096394)
chr2 (170-301)||(40860988-40861136)
chr2 (132-301)||(26556435-26556622)
chr2 (132-219)||(42730766-42730853)
chr2 (130-247)||(9470796-9470913)
chr2 (132-247)||(20922784-20922899)
chr2 (161-219)||(5271075-5271133)
chr2 (132-219)||(17088264-17088352)
chr2 (132-203)||(17920761-17920832)
chr2 (161-219)||(15614201-15614259)
chr2 (259-301)||(29205943-29205985)
chr2 (132-245)||(4470991-4471105)
chr2 (134-222)||(4564894-4564982)
chr2 (155-219)||(17071265-17071329)
chr2 (132-194)||(12465989-12466051)
chr2 (161-219)||(17077337-17077395)
chr2 (161-219)||(38838090-38838148)
chr2 (130-246)||(27495844-27495960)
chr2 (131-171)||(10709708-10709748)
chr2 (132-246)||(31742842-31742956)
chr2 (269-301)||(21747538-21747570)
chr2 (130-166)||(30555603-30555639)
[»] chr1 (21 HSPs)
chr1 (132-301)||(9660771-9660957)
chr1 (132-301)||(42763197-42763383)
chr1 (132-301)||(43781115-43781301)
chr1 (132-301)||(45757186-45757372)
chr1 (132-301)||(12745551-12745738)
chr1 (132-301)||(12756540-12756727)
chr1 (132-248)||(33189000-33189116)
chr1 (132-301)||(47188512-47188695)
chr1 (132-248)||(32057530-32057646)
chr1 (132-219)||(31489548-31489635)
chr1 (132-203)||(49229225-49229296)
chr1 (132-193)||(48470500-48470561)
chr1 (135-203)||(6501582-6501654)
chr1 (132-246)||(19406610-19406724)
chr1 (161-219)||(46237641-46237699)
chr1 (132-170)||(50512099-50512137)
chr1 (132-201)||(30533367-30533436)
chr1 (132-247)||(45565734-45565849)
chr1 (134-246)||(5114871-5114983)
chr1 (269-301)||(33189147-33189179)
chr1 (131-171)||(40412636-40412676)
[»] chr8 (23 HSPs)
chr8 (132-301)||(30436410-30436597)
chr8 (132-301)||(35813379-35813566)
chr8 (132-301)||(3654251-3654437)
chr8 (168-248)||(3940680-3940760)
chr8 (131-219)||(2349666-2349754)
chr8 (132-219)||(15243747-15243834)
chr8 (161-246)||(42739380-42739465)
chr8 (136-296)||(45451720-45451890)
chr8 (135-246)||(28968170-28968281)
chr8 (130-215)||(9201082-9201166)
chr8 (244-296)||(19293515-19293567)
chr8 (131-219)||(29894509-29894597)
chr8 (132-246)||(6266236-6266350)
chr8 (132-217)||(6142868-6142954)
chr8 (132-186)||(19293633-19293687)
chr8 (269-301)||(3940791-3940823)
chr8 (132-246)||(5927043-5927157)
chr8 (129-171)||(356406-356448)
chr8 (132-174)||(23222168-23222210)
chr8 (132-246)||(38231767-38231880)
chr8 (130-168)||(38894678-38894716)
chr8 (131-171)||(20823617-20823657)
chr8 (131-246)||(31894974-31895088)
[»] chr6 (17 HSPs)
chr6 (131-248)||(15065900-15066017)
chr6 (131-301)||(10997713-10997900)
chr6 (130-301)||(11369525-11369714)
chr6 (129-247)||(20139185-20139303)
chr6 (129-247)||(22193566-22193684)
chr6 (132-247)||(12272226-12272341)
chr6 (132-246)||(27966772-27966886)
chr6 (161-219)||(31472534-31472592)
chr6 (132-219)||(31655576-31655663)
chr6 (269-301)||(15066048-15066080)
chr6 (138-201)||(32465714-32465776)
chr6 (132-246)||(34178403-34178517)
chr6 (169-219)||(3044290-3044340)
chr6 (133-171)||(15183854-15183892)
chr6 (134-246)||(29641078-29641190)
chr6 (134-246)||(31511257-31511369)
chr6 (127-171)||(29034590-29034634)
[»] scaffold0219 (1 HSPs)
scaffold0219 (132-301)||(16583-16769)
[»] scaffold1449 (1 HSPs)
scaffold1449 (132-219)||(1590-1677)
[»] scaffold0295 (2 HSPs)
scaffold0295 (132-247)||(6139-6255)
scaffold0295 (132-219)||(3654-3742)


Alignment Details
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 129 - 301
Target Start/End: Original strand, 951345 - 951520
Alignment:
Q  129 gattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaa 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||     
T  951345 gattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtaaggcttgggccgaataagtggagcccgaaattgaagag 951444  T
Q  229 ggctttttagcccggcccgttagggc---tagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||| |  ||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  951445 ggctttttagcccggcccgtaaaagcccttggcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 951520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 129 - 301
Target Start/End: Complemental strand, 20034433 - 20034244
Alignment:
Q  129 gattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaa 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  20034433 gattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagag 20034334  T
Q  229 ggctttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20034333 ggctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 20034244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 17543722 - 17543909
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  17543722 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 17543821  T
Q  231 ctttttagcccggcccg-----------------ttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17543822 ctttttagcccggcccgtaaaagcccttggcccattagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 17543909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 47295539 - 47295725
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||    
T  47295539 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttggaccgaataattggagcccgaaattgaagagggc 47295638  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47295639 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgctcggaagcccgcaaaaaatacaa 47295725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 131 - 301
Target Start/End: Original strand, 39345805 - 39345993
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaag 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | |    
T  39345805 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaatagg 39345904  T
Q  230 gctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39345905 gctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 39345993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 130 - 301
Target Start/End: Complemental strand, 2323930 - 2323741
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  2323930 attagagctgtcaaaatgggccgggccgtaaggaccgggctgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagg 2323831  T
Q  230 gctttttagcccggc------------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||                  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2323830 gctttttagcccggcccgtaaaagccccttggcccgttagggctagcctgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 2323741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 45522475 - 45522661
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||    
T  45522475 tagagctgtcaaaatgggtcgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagagc 45522574  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  45522575 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccggacttcgggctgcccggaagcccgcaaaaaatacaa 45522661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 27869997 - 27870113
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||    
T  27869997 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccaaataattggagcccgaaattgaagagggc 27870096  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  27870097 tttttagcccggcccgt 27870113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 54134626 - 54134508
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |    
T  54134626 attagagctgtcaaaatgggccgggccgtaagggtcggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccaaaattgaagagg 54134527  T
Q  230 gctttttagcccggcccgt 248  Q
    |||||||||||||||||||    
T  54134526 gctttttagcccggcccgt 54134508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 32594018 - 32594105
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | | ||||||||||| ||||||||    
T  32594018 tagagctgtcaaaatgggccgggccgtacgggccggcccgaaagcccgaataaaatgtaggacctggaccgaataattgcagcccgaa 32594105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 44341168 - 44341246
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattg 210  Q
    |||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  44341168 tagagctgtcaaaacgggccgggccatacgggccggtccgaaagcccgaataaaatgtagggcttgggccgaataattg 44341246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 19240744 - 19240831
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| |||||||| | || || |||||||||||||||||||||||||||||| || |||| |||||||| ||||||||    
T  19240744 tagagctgtcaaaacgggccgggtcatatggaccggcccgaaagcccgaataaaatgtagggtttgggcctaataattgcagcccgaa 19240831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 1705337 - 1705251
Alignment:
Q  133 agagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||  | |||| |||||| | ||||||||    
T  1705337 agagctgtcaaaatgggtcgggccgtacgggccggcccgaaagcccgaataaaatgcagggtctgggccaaataatagcagcccgaa 1705251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 3415316 - 3415258
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  3415316 gggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattggagcccgaa 3415258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 32767585 - 32767671
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccg 247  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||| |||||||| ||    | |||||||||||||||||||    
T  32767585 gggccggcccgaaagcccgaataaaatatagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccg 32767671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 7138473 - 7138416
Alignment:
Q  244 cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7138473 cccgttaaagctagcccgtccgggctccgggctgcccagaagcccgcaaaaaatacaa 7138416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 9455469 - 9455382
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||| |  || ||||||| |||||||||||||||||||||||||  | | | ||||||||| ||||||||    
T  9455469 tagagctgtcaaaatgggccggacaatacgggccggtccgaaagcccgaataaaatgtagggactggactgaataattgcagcccgaa 9455382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 34859189 - 34859078
Alignment:
Q  135 agctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggcttt 234  Q
    |||||||||||| |||||||||||| ||| ||| |||||| ||||||||||||| ||||| | ||||||||||| | |||| ||| ||    | ||||||    
T  34859189 agctgtcaaaataggccgggccgtacgggtcggtccgaaaacccgaataaaatgcagggcctgggccgaataatagaagcctgaattttttcagggcttt 34859090  T
Q  235 ttagcccggccc 246  Q
    ||||||||||||    
T  34859089 ttagcccggccc 34859078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 34030272 - 34030387
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||  |||||| ||||| |||||| |||||||||||||| |||| ||||||||| |||| || ||| | |||| ||| || || | |||    
T  34030272 tagagctgtcaaaacaggccggtccgtacgggccgacccgaaagcccgaa-aaaacgtagggcttgggcctaaaaatggcagcctgaatttaaacagggc 34030370  T
Q  232 tttttagcccggcccgt 248  Q
    ||||| |||||||||||    
T  34030371 tttttggcccggcccgt 34030387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 16029724 - 16029783
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtag 191  Q
    |||||||||||||||| | |||||| || ||||| |||||||||||||||||||||||||    
T  16029724 tagagctgtcaaaatgagtcgggccttacgggccagcccgaaagcccgaataaaatgtag 16029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 7138602 - 7138493
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa-attgaagaagg 230  Q
    |||||| |||||||||| |||| ||||| ||||||  ||||||| |||| ||||||||| || || ||||||||||||| ||||| ||  ||||||| ||    
T  7138602 tagagccgtcaaaatgg-ccggaccgtacgggccgatccgaaagtccgattaaaatgtaaggtttgggccgaataattgcagcccaaattttgaagaggg 7138504  T
Q  231 ctttttagccc 241  Q
    |||||||||||    
T  7138503 ctttttagccc 7138493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 43286365 - 43286279
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccg 247  Q
    |||| ||||||| ||||||||||||| ||||||||| |||| |||||||| |||||||| ||    | |||||||||||||||||||    
T  43286365 gggctggcccgagagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccg 43286279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 52464199 - 52464141
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||  ||||||||    
T  52464199 gggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattacagcccgaa 52464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 54787532 - 54787480
Alignment:
Q  244 cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaa 296  Q
    ||||||||||||| ||| | |||||||||||||||||||||||| ||||||||    
T  54787532 cccgttagggctatcccattcgggctccgggctgcccggaagcctgcaaaaaa 54787480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 56264559 - 56264445
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  56264559 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 56264461  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  56264460 ctttttagcccggccc 56264445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 54787652 - 54787598
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaa 186  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| |||||||    
T  54787652 tagagttgtcaaaatgggctgggccgtacgggccggcccgaaaaccctaataaaa 54787598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 53925305 - 53925420
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    |||||||| |||||| ||||||||||||| ||||||| |||   |||||||| ||||| |||||||| |||| || |  | ||||||||| || || | |    
T  53925305 ttagagctatcaaaacgggccgggccgtatgggccggtccgtttagcccgaa-aaaatatagggcttgggcctaaaatattgagcccgaattttaatagg 53925403  T
Q  230 gctttttagcccggccc 246  Q
    |||||||||||||||||    
T  53925404 gctttttagcccggccc 53925420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 54134477 - 54134445
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||||||||||||||||    
T  54134477 tccgggctgcccggaagcccgcaaaaaatacaa 54134445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 401513 - 401399
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    ||||||||||||||| |||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  401513 tagagctgtcaaaataggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 401415  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||| ||||||    
T  401414 ctttttagctcggccc 401399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 1325045 - 1324944
Alignment:
Q  147 gggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggccc 246  Q
    ||||||| || || || |||| ||||||| |||||||||||||| ||||| ||| ||| |||| ||||||||| ||    | ||||||||||||| ||||    
T  1325045 gggccggaccatatggaccggaccgaaagtccgaataaaatgtaaggcttgggctgaaaaattagagcccgaatttttccagggctttttagcccagccc 1324946  T
Q  247 gt 248  Q
    ||    
T  1324945 gt 1324944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 26489214 - 26489243
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgta 159  Q
    ||||||||||||||||||||||||||||||    
T  26489214 attagagctgtcaaaatgggccgggccgta 26489243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 41361232 - 41361317
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccg 217  Q
    |||||||||||||| ||||  | |  || |||||||||||||||||||||||||| | | ||||| |||| || ||||| ||||||    
T  41361232 tagagctgtcaaaacgggctagcctatatgggccggcccgaaagcccgaataaaacgcatggcttgggcctaaaaattgcagcccg 41361317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 48152682 - 48152813
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||| | |||||| ||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  48152682 tagagctgtcaaaacgggccggcccggatgggccgacccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 48152780  T
Q  231 ctttttagcccgg--cccgttagggctagcccg 261  Q
     ||||||||||||  ||||||||||||||||||    
T  48152781 ttttttagcccggtacccgttagggctagcccg 48152813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 19823800 - 19823760
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  19823800 ttagagctgtcaaaacgggccgggccgaatgggccggcccg 19823760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 23025136 - 23025322
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  23025136 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 23025235  T
Q  232 tttttagcccg-----------------gcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23025236 tttttagcccggcccgtaaaagcccttagcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 23025322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 1873610 - 1873796
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  1873610 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 1873709  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  1873710 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtcctggctccgggctgcccggaagcccgcaaaaagtacaa 1873796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 39494179 - 39493992
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | ||    
T  39494179 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaataggg 39494080  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39494079 ctttttagcccggcctgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 39493992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 16526162 - 16526278
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||    
T  16526162 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagtccgaataaaatgtagggcttgagccgaataattggagcccgaaattgaagagggc 16526261  T
Q  232 tttttagcccggcccgt 248  Q
    ||||||| |||||||||    
T  16526262 tttttagtccggcccgt 16526278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 161 - 301
Target Start/End: Original strand, 10993189 - 10993347
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaaggctttttagcccggcccg------------ 247  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||                
T  10993189 gggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagctcgaaatttgaagagggctttttagcccggcccgtaaaagcccttg 10993288  T
Q  248 -----ttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10993289 gcccattagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 10993347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 7505211 - 7505327
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||| ||    | |||    
T  7505211 tagagctgtcaaaacgggccggcccgtatgggccggcccgaaagcctgaataaaatgtagggcttgggcctaataattgcagcccgaatttttccagggc 7505310  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  7505311 tttttagcccggcccgt 7505327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 31272251 - 31272135
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||| ||| ||||||||| |||||| ||| ||||||||||||||||||||||||| |||| |||||||| ||| |||| ||    | |||    
T  31272251 tagagctgtcaaaacgggtcgggccgtatgggccgacccaaaagcccgaataaaatgtagggcttgggcctaataattgcagcacgaatttttccagggc 31272152  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  31272151 tttttagcccggcccgt 31272135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 41200197 - 41200259
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggc 194  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||    
T  41200197 tagagctgtcaaaatgggccgggccttacgggccggcccgaaagcccaaataaaatgtagggc 41200259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 49112512 - 49112574
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggc 194  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||| ||| ||||||    
T  49112512 tagagctgtcaaaatgggtcgggccttacgggccggcccgaaagcccgaatataatatagggc 49112574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 47381583 - 47381498
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggccc 246  Q
    ||||||||||||||  ||| |||||| ||||||||| |||| ||||||||||||||||| ||    | ||||||||||||||||||    
T  47381583 gggccggcccgaaaatccgcataaaacgtagggcttgggcctaataattggagcccgaatttttccagggctttttagcccggccc 47381498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 35709867 - 35709982
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||| |||   |||| || ||||| |||||||||||||||||||| | ||||||| |||| || ||||| |||||  | || |  | |||    
T  35709867 tagagctgtcaaaacgggttaggccatatgggccagcccgaaagcccgaataaaacgcagggcttgggcctaaaaattgcagcccatattttatcagggc 35709966  T
Q  232 tttttagcccggcccg 247  Q
    ||||||||||||||||    
T  35709967 tttttagcccggcccg 35709982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 33604559 - 33604616
Alignment:
Q  162 ggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| |||| ||||| ||||||||| |||| |||||||| ||||||||    
T  33604559 ggccggcccgaaagtccgagtaaaacgtagggcttgggcctaataattgtagcccgaa 33604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 19105789 - 19105829
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccga 172  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  19105789 tagagctgtcaaaatgggccgggccgtacgggctggcccga 19105829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 37471672 - 37471557
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    ||||||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| |||| ||| |||| || |  | ||||||||| || || | |    
T  37471672 ttagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaat-aaatataggacttgggcctaaaatattgagcccgaattttaatagg 37471574  T
Q  230 gctttttagcccggccc 246  Q
    |||||||||||||||||    
T  37471573 gctttttagcccggccc 37471557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 16526309 - 16526341
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||| ||||||||||||||||||||    
T  16526309 tccgggctgcccagaagcccgcaaaaaatacaa 16526341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 6955921 - 6955735
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  6955921 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 6955822  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6955821 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 6955735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 10642175 - 10642003
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  10642175 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 10642076  T
Q  232 tttttagcccggcccgttagggc---tagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||||||||| |  ||   | ||||||  ||||||||| ||||||| |||||||||||||||||||    
T  10642075 tttttagcccggcccgtaaaagctcttggcccgttagggctccggactgcccgaaagcccgcaaaaaatacaa 10642003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 38356155 - 38355969
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  38356155 tagagctgtcaaaatgggccgggtcgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 38356056  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38356055 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 38355969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 6238156 - 6238343
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  6238156 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 6238255  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6238256 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 6238343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 6899866 - 6900053
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  6899866 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 6899965  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6899966 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 6900053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 21731688 - 21731874
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  21731688 tagagctgtcaaaatgggccgggccgtaagggccgggccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 21731787  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21731788 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccaggctgcccggaagcccgcaaaaaatacaa 21731874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 35038882 - 35038696
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  35038882 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 35038783  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  35038782 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgttcgggctccaggctgcccggaagcccgcaaaaaatacaa 35038696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 42860445 - 42860259
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||     
T  42860445 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggtttgggccgaataattggagcccgaaattgaagagggt 42860346  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42860345 tttttagcccagcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 42860259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 24477257 - 24477444
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| ||    
T  24477257 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgagccgaataattggagcccgaaatttgaagaggg 24477356  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24477357 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 24477444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 35838081 - 35838268
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | ||    
T  35838081 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaataggg 35838180  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35838181 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 35838268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 135 - 301
Target Start/End: Complemental strand, 4700057 - 4699873
Alignment:
Q  135 agctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaaggctt 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| | |||||    
T  4700057 agctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggtttgggccgaataattggagcccgaaatttgaatagggctt 4699958  T
Q  234 tttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||                 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  4699957 tttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccgaaagcccgcacaaaatacaa 4699873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 301
Target Start/End: Original strand, 9996243 - 9996400
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagccc-----------------gg 243  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||                 ||    
T  9996243 gggccgggccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttgg 9996342  T
Q  244 cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9996343 cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 9996400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 36016251 - 36016361
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||||||||| |||||||||| |    
T  36016251 attagagctgtcaaaatgggccgggccgtaagggccggccc--------gaataaaatgtagggcttgggccgaataattggagcccaaaattgaagagg 36016342  T
Q  230 gctttttagcccggcccgt 248  Q
    |||||||||||||||||||    
T  36016343 gctttttagcccggcccgt 36016361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 1845416 - 1845468
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataa 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1845416 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataa 1845468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 20338638 - 20338567
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccga 203  Q
    ||||||||||||||||||||||||  || ||||||||||||||| |||||||||||||||||| ||||||||    
T  20338638 tagagctgtcaaaatgggccgggctttacgggccggcccgaaagtccgaataaaatgtagggcctaggccga 20338567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 6452984 - 6453102
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa-attgaagaag 229  Q
    |||||||||||||||||| ||||| | || | ||||| | |||||| |||||||||||||||| ||  |||||||||||| ||||||||  ||||||| |    
T  6452984 ttagagctgtcaaaatggaccgggtcatacgagccggtctgaaagctcgaataaaatgtagggtttgtgccgaataattgcagcccgaattttgaagagg 6453083  T
Q  230 gctttttagcccggcccgt 248  Q
    ||||||||||||| |||||    
T  6453084 gctttttagcccgacccgt 6453102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 38976349 - 38976263
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccg 247  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||| ||    |||||||||||||||||||||    
T  38976349 gggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaattttccaaaggctttttagcccggcccg 38976263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 37206168 - 37206090
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattg 210  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||||||| ||||||||| |||| || |||||    
T  37206168 tagagctgtcaaaacgggccggcccgtataggccggcccgaaagcccgaataaaacgtagggcttgggcctaaaaattg 37206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 1845461 - 1845509
Alignment:
Q  200 ccgaataattggagcccgaaattgaagaaggctttttagcccggcccgt 248  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1845461 ccgaataattggagtccgaaattgaagagggctttttagcccggcccgt 1845509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 5361319 - 5361206
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||||||| ||||||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  5361319 tagagctgtcaaaatgggtcgggccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 5361221  T
Q  231 ctttttagcccggcc 245  Q
    |||||||||||||||    
T  5361220 ctttttagcccggcc 5361206  T

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Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 74949 - 75038
Alignment:
Q  128 agattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccg 217  Q
    |||||||||||||||||| ||||  | || || ||| ||| |||||||||||||||||| ||||||||| |||| || ||||| ||||||    
T  74949 agattagagctgtcaaaacgggctagcccatatgggtcggtccgaaagcccgaataaaacgtagggcttgggcctaaaaattgcagcccg 75038  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 33908229 - 33908142
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccgt 248  Q
    ||||||| ||||||||||||||||||   ||||| | ||||||| |||||||||||||| ||    | ||||||||||||||||||||    
T  33908229 gggccggtccgaaagcccgaataaaacacagggcctgggccgaaaaattggagcccgaatttttctagggctttttagcccggcccgt 33908142  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 17085407 - 17085457
Alignment:
Q  169 ccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  17085407 ccgaaagcccgaataaaatgtagggtctgggccgaataattgaagcccgaa 17085457  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21151879 - 21151838
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  21151879 attagagctgtcaaaacgggccgggccgtatgggccggcccg 21151838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21159014 - 21158973
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  21159014 attagagctgtcaaaacgggccgggccgtatgggccggcccg 21158973  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 1398462 - 1398374
Alignment:
Q  161 gggccggcccgaaagcccgaataaaat-gtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccgt 248  Q
    ||||||||||||||||||||| ||||  ||||||||| |||| || ||| | |||||||| || || | |||||||| |||||||||||    
T  1398462 gggccggcccgaaagcccgaaaaaaaacgtagggcttgggcctaaaaatggcagcccgaatttaaatagggctttttggcccggcccgt 1398374  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 6453115 - 6453167
Alignment:
Q  244 cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaa 296  Q
    ||||||||||||| ||||||||  |||||||| ||| ||||||||||||||||    
T  6453115 cccgttagggctaacccgtccgaactccgggccgccaggaagcccgcaaaaaa 6453167  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 40918037 - 40917975
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtaggg 193  Q
    |||||||||| |||||||| | | || || || |||| |||||||||||||||||||||||||    
T  40918037 ttagagctgtgaaaatgggtctgtccttacggaccggtccgaaagcccgaataaaatgtaggg 40917975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21162822 - 21162781
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    |||||||||||||||| ||||||||||||| ||||| |||||    
T  21162822 attagagctgtcaaaacgggccgggccgtatgggcccgcccg 21162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 1845540 - 1845572
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||| ||||||||||||||||||||||    
T  1845540 tccgggctgctcggaagcccgcaaaaaatacaa 1845572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 18922121 - 18922161
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||| ||||||||||||  |||||||||||    
T  18922121 ttagagctgtcaaaacgggccgggccgtgtgggccggcccg 18922161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 26264538 - 26264424
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggcc-gaataattggagcccgaaattgaagaag 229  Q
    |||||||||||||| ||||||| ||||| ||||||| |||   ||||||||| |||| |||||||| ||||  ||| ||| ||||||||| || || | |    
T  26264538 tagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaat-aaatatagggcttgggcctaaattatt-gagcccgaattttaatagg 26264441  T
Q  230 gctttttagcccggccc 246  Q
    |||||||||||||||||    
T  26264440 gctttttagcccggccc 26264424  T

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Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 21076020 - 21075834
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  21076020 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 21075921  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21075920 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggcttcgggctgcccggaagcccgcaaaaaatacaa 21075834  T

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Target: chr3; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 43746416 - 43746229
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  43746416 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 43746317  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43746316 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 43746229  T

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Target: chr3; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 46311832 - 46312018
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||    
T  46311832 tagagctgtcaaaatgggtcgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccaaaattgaagagggc 46311931  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46311932 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggcttcgggctgcccggaagcccgcaaaaaatacaa 46312018  T

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Target: chr3; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 46219071 - 46219258
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaa-gcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  46219071 tagagctgtcgaaatgggccgggccgtaagggccggcccgaaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagaggg 46219170  T
Q  231 ctttttagcc-----------------cggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46219171 ctttttagccgggcccgtaaaagcccttggcccgttagggctagcccgtccgagctccgggctgcccggaagcccgcaaaaaatacaa 46219258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 164 - 301
Target Start/End: Original strand, 27877532 - 27877686
Alignment:
Q  164 ccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagccc-----------------ggccc 246  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||                 |||||    
T  27877532 ccggtccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttggccc 27877631  T
Q  247 gttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27877632 gttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 27877686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 45601277 - 45601163
Alignment:
Q  17 accaaattatgtggatcttgtaaaattgatgagactcgtatatattttaaccaagaaaagagactgttgaaggtttatactaaataatatgagtatgtgt 116  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||| ||| ||||||| |||||||||||| |||||| ||||||||    
T  45601277 accaaattatgtgggtcttgtaaaattgatgagactcacatatattttaaccaataaaaaagagtgttgaaagtttatactaaaaaatatgggtatgtgt 45601178  T
Q  117 ttctatcactgagat 131  Q
    |||||||| ||||||    
T  45601177 ttctatcagtgagat 45601163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 6888856 - 6888741
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||||||| ||    | |||    
T  6888856 tagagttgtcaaaatgggccggcccgtatgggccggcccgaaagcccgcataaaatatagggcttgggcctaataattggagcccgaatttttccagggc 6888757  T
Q  232 tttttagcccggcccg 247  Q
    ||||||||||||||||    
T  6888756 tttttagcccggcccg 6888741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 42854425 - 42854312
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||  |||| ||||| ||||||||||||| |||||| ||||||||| |||| ||||||||||||||||| ||    |||||    
T  42854425 tagagctgtcaaaatgggccggctcgtatgggccagcccgaaagcccgcataaaacgtagggcttgggcctaataattggagcccgaattttttcaaggc 42854326  T
Q  232 tttttagcccggcc 245  Q
    ||||||||||||||    
T  42854325 tttttagcccggcc 42854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 43735958 - 43736073
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| | ||||| | ||||||| ||||||||||| |||||    | |||    
T  43735958 tagagctgtcaaaatgggtcgggccgtatgggccagcccgaaagcccgaataaaacgcagggcctgggccgaaaaattggagccc-aaattttctagggc 43736056  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  43736057 tttttagcccggcccgt 43736073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 19975754 - 19975870
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||| ||| |||| |||| |||||||||  ||||||||||||||||||||||||| || | |||||||| |||||||| ||    | |||    
T  19975754 tagagctgtcaaaacgggtcgggtcgtatgggccggccgaaaagcccgaataaaatgtagggcttgggtctaataattgcagcccgaatttttccagggc 19975853  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  19975854 tttttagcccggcccgt 19975870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 33982994 - 33983080
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccg 247  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| ||    | |||||||||||||||||||    
T  33982994 gggccggcccgaaagcccaaataaaatgtagggcttgggcctaataattggagcccgaatttttccagggctttttagcccggcccg 33983080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 2868977 - 2869095
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    |||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||| |||| |||| ||||  | ||||| |||||||| ||    | |    
T  2868977 attagagctgtcaaaaggggtcgggccgtatgggctggcccgaaagcccgaataaaacgtagagcttgggcctgaaaattgcagcccgaatttctttagg 2869076  T
Q  230 gctttttagcccggcccgt 248  Q
    |||||||| ||||||||||    
T  2869077 gctttttaacccggcccgt 2869095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 7910311 - 7910197
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  7910311 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 7910213  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  7910212 ctttttagcccggccc 7910197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 27969482 - 27969533
Alignment:
Q  168 cccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||| |||||| ||||||||| |||| |||||||||||||||||    
T  27969482 cccgaaagcccgcataaaacgtagggcttgggcctaataattggagcccgaa 27969533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 41933241 - 41933355
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||||||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  41933241 tagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 41933339  T
Q  231 ctttttagcccggccc 246  Q
    ||||| ||||||||||    
T  41933340 cttttcagcccggccc 41933355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 26844645 - 26844575
Alignment:
Q  134 gagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaa 204  Q
    ||||||||||||| || |||| | || ||||||||| ||||| ||||||||||||||||| || |||||||    
T  26844645 gagctgtcaaaataggtcgggtcttatgggccggccagaaagtccgaataaaatgtagggtttgggccgaa 26844575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 3974885 - 3974771
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggccc-gaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||||||||| ||||||||||    |||||| || |||| |||||||||||||  | |  | ||||||||| || || | ||    
T  3974885 tagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccg-attaaatatagggcttaggccttaaatattgagcccgaattttaataggg 3974787  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  3974786 ctttttagcccggccc 3974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 3994992 - 3995106
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggccc-gaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||||||||| ||||||||||    |||||| || |||| |||||||||||||  | |  | ||||||||| || || | ||    
T  3994992 tagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccg-attaaatatagggcttaggccttaaatattgagcccgaattttaataggg 3995090  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  3995091 ctttttagcccggccc 3995106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 33911619 - 33911733
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||||| ||||||| |||   ||||||||| |||| ||||||||||||| || |  | ||||||||| || || | |     
T  33911619 tagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaat-aaatatagggcttaggcctaaaatattgagcccgaattttaatagga 33911717  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  33911718 ctttttagcccggccc 33911733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 24310804 - 24310862
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| ||||||||||| |||||| |||| || || ||||| ||||||||    
T  24310804 gggccggcccgaaaacccgaataaaacgtagggtttagacctaaaaattgcagcccgaa 24310862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 49318265 - 49318306
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    |||||||||||||||| ||| ||||||||| |||||||||||    
T  49318265 attagagctgtcaaaacgggtcgggccgtatgggccggcccg 49318306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 11486112 - 11486172
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagg 192  Q
    |||||||||||||| ||||||||||  | |||||| ||||||||||| || |||| |||||    
T  11486112 tagagctgtcaaaacgggccgggccaaatgggccgacccgaaagcccaaaaaaaacgtagg 11486172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 9e-61; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 15560705 - 15560519
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  15560705 tagagctgtcaaaataggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 15560606  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15560605 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 15560519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 40000925 - 40000740
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||    
T  40000925 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattgg-gcccgaaattgaagagggc 40000827  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40000826 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 40000740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 130 - 301
Target Start/End: Complemental strand, 29201547 - 29201359
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  29201547 attagagctgtcaaaatgggtcgggccgtaagggccgggccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagg 29201448  T
Q  230 gctttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||                 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29201447 gctttttagcccggcccgtaaaagcccttggcccgttagggctagaccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 29201359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 21747389 - 21747507
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  21747389 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagg 21747488  T
Q  230 gctttttagcccggcccgt 248  Q
    |||||||||||||||||||    
T  21747489 gctttttagcccggcccgt 21747507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 25096278 - 25096394
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  25096278 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 25096377  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  25096378 tttttagcccggcccgt 25096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 40861136 - 40860988
Alignment:
Q  170 cgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcc-----------------cggcccgttagg 252  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||                  |||||||||||    
T  40861136 cgaaagcccgaataaaatgtagggcttgagccgaataattggagcccgaaattgaagagggctttttagcctggcccgtaaaagcccttggcccgttagg 40861037  T
Q  253 gctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40861036 gctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 40860988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 26556622 - 26556435
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa-attgaagaagg 230  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||| ||||  ||||||| ||    
T  26556622 tagagccgtcaaaatgggccgggacgtacgggccggcccgaaagtccgattaaaatgtagggcttgggccgaataattgcagctcgaattttgaagaggg 26556523  T
Q  231 ctttttagcccgg-----------------cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26556522 ctttttagcccggcccgtaaaaactcataacccgttagggctagcccgtccgggctccgggctacccggaagcccgcgaaaaatacaa 26556435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 42730853 - 42730766
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||  ||||||||| ||||||| |||||||||||||||||||| ||||||| ||||||||||| | ||||||||    
T  42730853 tagagctgtcaaaatggatcgggccgtacgggccgggccgaaagcccgaataaaatgcagggcttgggccgaataatagcagcccgaa 42730766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 9470796 - 9470913
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    ||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||| || ||||||  ||| | |||||||| ||    | |    
T  9470796 attagagctgtcaaaatggaccgggccttacaggccggcccgaaagcccgaataaaatgtagggtttgggccgataaatagcagcccgaattttttcagg 9470895  T
Q  230 gctttttagcccggcccg 247  Q
    ||||||||||||||||||    
T  9470896 gctttttagcccggcccg 9470913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 20922899 - 20922784
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| || |  |  |||||||||||| |||||||| ||    | |||    
T  20922899 tagagctgtcaaaattggccgggccgtacgggccggtccgaaagcccgaataaaatgcagagtctgtgccgaataattgcagcccgaattttttcagggc 20922800  T
Q  232 tttttagcccggcccg 247  Q
    ||||||||||||||||    
T  20922799 tttttagcccggcccg 20922784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 5271075 - 5271133
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  5271075 gggccggcccgaaagcccgaataaaatgcagggcttgggccgaaaaattggagcccgaa 5271133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 17088352 - 17088264
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaa-gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||||||| || |||  |||||||  ||||||||    
T  17088352 tagagctgtcaaaacgggccggcccgtattgggccggcccgaaagcccgaataaaatgtagggtttgggcttaataattttagcccgaa 17088264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 17920761 - 17920832
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccga 203  Q
    |||||||||||||||||| |||||| ||  |||||||||||||||| ||||||||||||||| || ||||||    
T  17920761 tagagctgtcaaaatgggtcgggccttacaggccggcccgaaagcctgaataaaatgtagggtttgggccga 17920832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 15614259 - 15614201
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||| ||||||||    
T  15614259 gggccggcccgaaagcccgaataaaatatagggcttgggcctaataattgcagcccgaa 15614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 301
Target Start/End: Complemental strand, 29205985 - 29205943
Alignment:
Q  259 ccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29205985 ccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 29205943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 4471105 - 4470991
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa-attgaagaagg 230  Q
    |||||||||||||||||||||    ||| |||||||||| |||||| || ||||||||||||||| |||| |||||| | ||||| ||  ||||||| ||    
T  4471105 tagagctgtcaaaatgggccgaattgtacgggccggcccaaaagcctgattaaaatgtagggcttgggccaaataatggcagcccaaattttgaagaggg 4471006  T
Q  231 ctttttagcccggcc 245  Q
     |||||||| |||||    
T  4471005 ttttttagcgcggcc 4470991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 4564894 - 4564982
Alignment:
Q  134 gagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaatt 222  Q
    |||||||||||| ||||||| || || || |||||| ||| || |||||||||||||||||||  ||| || ||||| |||||||||||    
T  4564894 gagctgtcaaaacgggccggcccatatggaccggcctgaacgctcgaataaaatgtagggcttgtgcctaaaaattgcagcccgaaatt 4564982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 17071329 - 17071265
Alignment:
Q  155 ccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||  |||||||  ||||||||    
T  17071329 ccgtatgggccggcccgaaagcccgaataaaatgtagggtttgggcttaataatttcagcccgaa 17071265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 12466051 - 12465989
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggc 194  Q
    |||||||||||||||||| | |||| || ||| |||||||||||||| ||| |||||||||||    
T  12466051 tagagctgtcaaaatgggtcaggccttatgggtcggcccgaaagcccaaattaaatgtagggc 12465989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 17077395 - 17077337
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    ||||||||||||||||||||||||||||||||| || |||  |||||||  ||||||||    
T  17077395 gggccggcccgaaagcccgaataaaatgtagggtttgggcttaataatttcagcccgaa 17077337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 38838148 - 38838090
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||| ||||||||| |||| || ||||| || |||||    
T  38838148 gggccggcccgaaagcccgaataaaacgtagggcttgggcctaaaaattgcagtccgaa 38838090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 27495844 - 27495960
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaa 228  Q
    |||||||||||||||| || |||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || |     
T  27495844 attagagctgtcaaaacggaccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaatag 27495942  T
Q  229 ggctttttagcccggccc 246  Q
    ||||||||||||||||||    
T  27495943 ggctttttagcccggccc 27495960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 10709708 - 10709748
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  10709708 ttagagctgtcaaaatgggccgggccgtatgggctggcccg 10709748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 31742842 - 31742956
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || |  |    
T  31742842 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaatagag 31742940  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  31742941 ctttttagcccggccc 31742956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 21747538 - 21747570
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||||||||||| |||||||||||||    
T  21747538 tccgggctgcccggaagccagcaaaaaatacaa 21747570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 30555603 - 30555639
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccg 166  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  30555603 attagagctgtcaaaacgggccgggccgtatgggccg 30555639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 9e-61; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 9660957 - 9660771
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  9660957 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaatcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 9660858  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9660857 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 9660771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 42763383 - 42763197
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||    
T  42763383 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattgaagcccgaaattgaagagggc 42763284  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42763283 tttttagcccggtccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 42763197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 43781301 - 43781115
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||     
T  43781301 tagagctgtcaaaatgggccaggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggt 43781202  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43781201 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 43781115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 45757372 - 45757186
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  45757372 tagagctgtcaaaatgggtcgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 45757273  T
Q  232 tttttagcccg-----------------gcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45757272 tttttagcccggcccataaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccgaaagcccgcaaaaaatacaa 45757186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 12745551 - 12745738
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | ||    
T  12745551 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaataggg 12745650  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12745651 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 12745738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 12756540 - 12756727
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | ||    
T  12756540 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaataggg 12756639  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756640 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 12756727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 33189000 - 33189116
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  33189000 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 33189099  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||||||||    
T  33189100 tttttagcccggcccgt 33189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 47188695 - 47188512
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||| | |    
T  47188695 tagagctgtcaaaatgggccgg-ccgtaagagccggcctgaaagcccgaataaaatgtagggcttgggc--aataattggagcctgaaattgaagaggac 47188599  T
Q  232 tttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    ||||||||||                 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47188598 tttttagcccggcccgtaaaagcccttggcccgttaaggctagcccgtccggactccgggctgcccggaagcccgcaaaaaatacaa 47188512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 32057530 - 32057646
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| | ||||| | ||||||| |||||||||||||| ||    | |||    
T  32057530 tagagctgtcaaaatggggcgggccgtatgggccggcccgaaatcccgaataaaacgcagggcctgggccgaaaaattggagcccgaatttttctagggc 32057629  T
Q  232 tttttagcccggcccgt 248  Q
    |||||||||||| ||||    
T  32057630 tttttagcccggtccgt 32057646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 31489635 - 31489548
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||  |||||||| |||| || ||||  ||||||||    
T  31489635 tagagctgtcaaaacgggccgggccgaatgggccagcccgaaagcccgaataaaacatagggcttgggcctaaaaattacagcccgaa 31489548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 49229296 - 49229225
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccga 203  Q
    ||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||| |||| || ||||||    
T  49229296 tagagctgtcaaaatggaccgggccttacgggccagcccgaaagcccgaataaaatgcagggtttgggccga 49229225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 48470561 - 48470500
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtaggg 193  Q
    ||||| |||||||||||| |||||| || |||||||||| ||||||||||||||||||||||    
T  48470561 tagaggtgtcaaaatgggtcgggccttacgggccggcccaaaagcccgaataaaatgtaggg 48470500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 6501582 - 6501654
Alignment:
Q  135 agctgtcaaaatgggccgggccgtaa----gggccggcccgaaagcccgaataaaatgtagggcttaggccga 203  Q
    |||||||||||||||||||||| |||    |||||| ||||||||||||||||||||| ||||| | ||||||    
T  6501582 agctgtcaaaatgggccgggccttaattacgggccgacccgaaagcccgaataaaatgcagggcctgggccga 6501654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 19406610 - 19406724
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    ||||| |||||||||||||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  19406610 tagagttgtcaaaatgggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 19406708  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  19406709 ctttttagcccggccc 19406724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 46237699 - 46237641
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||| || ||||||||||||||||| |||||||| |||| |||||||| ||||||||    
T  46237699 gggccgacctgaaagcccgaataaaatatagggcttgggcctaataattgcagcccgaa 46237641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 50512137 - 50512099
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggccc 170  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  50512137 tagagctgtcaaaatgggccgggccgtatgggccggccc 50512099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 30533367 - 30533436
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggcc 201  Q
    |||||||||||||| || |||| ||  | ||| |||||||||||||||||||||||||||| ||| ||||    
T  30533367 tagagctgtcaaaacggaccggaccaaatgggtcggcccgaaagcccgaataaaatgtaggtcttgggcc 30533436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 45565734 - 45565849
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||| ||||||||||||| | || | || |||||||| |||||  || ||||||||||||||| ||||| ||  ||| | |||||||||||    | |||    
T  45565734 tagaactgtcaaaatgggtcaggtcttacgggccggctcgaaaatccaaataaaatgtagggcctaggctgataaatagcagcccgaaatttttcagggc 45565833  T
Q  232 tttttagcccggcccg 247  Q
    ||||||||||||||||    
T  45565834 tttttagcccggcccg 45565849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 5114871 - 5114983
Alignment:
Q  134 gagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggct 232  Q
    |||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  |  |||||||| || || | ||||    
T  5114871 gagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattaagcccgaattttaatagggct 5114969  T
Q  233 ttttagcccggccc 246  Q
    ||||||||||||||    
T  5114970 ttttagcccggccc 5114983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 33189147 - 33189179
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||| ||||||||||||||||||||||||    
T  33189147 tccgggcttcccggaagcccgcaaaaaatacaa 33189179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 40412676 - 40412636
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||| |||||||||||||  ||||||||||    
T  40412676 ttagagctgtcaaaacgggccgggccgtattggccggcccg 40412636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 5e-59; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 30436597 - 30436410
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  30436597 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 30436498  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30436497 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 30436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 35813566 - 35813379
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaagg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  35813566 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 35813467  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35813466 ctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 35813379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 3654437 - 3654251
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  3654437 tagagctgtcaaaataggccgggccgtaagggccggtccaaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 3654338  T
Q  232 tttttagcccggcc-----------------cgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||| |||||                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3654337 tttttagctcggcccgtaaaagcccttggctcgttagggctagcccgtccgggcttcgggctgcccggaagcccgcaaaaaatacaa 3654251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 3940680 - 3940760
Alignment:
Q  168 cccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggcccgt 248  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3940680 cccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggctttttagcccggcccgt 3940760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 2349666 - 2349754
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| | ||||||||||||| ||| ||||    
T  2349666 ttagagctgtcaaaatgggccgggtcgtacgggccagcccgaaagcccgaataaaatgtagggcctgggccgaataattgcagctcgaa 2349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 15243747 - 15243834
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||| | ||||||||||||| ||||||||    
T  15243747 tagaactgtcaaaatgggtcgggccgtatgggccggcccgaaagcctgagtaaaatgtagggcctgggccgaataattgcagcccgaa 15243834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 42739465 - 42739380
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggctttttagcccggccc 246  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||| ||    | ||||||||||||||||||    
T  42739465 gggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggccc 42739380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 296
Target Start/End: Complemental strand, 45451890 - 45451720
Alignment:
Q  136 gctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaatt-gaagaaggcttt 234  Q
    |||||||||||||||||||||||| |||||||||||||        |||||||||||||||  |||||||||||| ||| |||| || ||||| | ||||    
T  45451890 gctgtcaaaatgggccgggccgtacgggccggcccgaa--------taaaatgtagggcttgagccgaataattgcagctcgaattttgaagaggacttt 45451799  T
Q  235 ttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaa 296  Q
    ||||||||||                 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  45451798 ttagcccggctcgtaaaaacccgtaacccgttagggctagcccgtccgggcttcgggccgcccggaagcccgcaaaaaa 45451720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 28968170 - 28968281
Alignment:
Q  135 agctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggcttt 234  Q
    |||||||||||| |||||||||||| ||| ||| |||||| ||||||||||||| ||||| | ||||||||||| | |||| ||| ||    | ||||||    
T  28968170 agctgtcaaaataggccgggccgtacgggtcggtccgaaaacccgaataaaatgcagggcctgggccgaataatagaagcctgaattttttcagggcttt 28968269  T
Q  235 ttagcccggccc 246  Q
    ||||||||||||    
T  28968270 ttagcccggccc 28968281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 9201082 - 9201166
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcc 215  Q
    ||||||| |||||||| ||||||| || || || |||||||||||| |||||||||| |||||| || ||||||||||||| ||||    
T  9201082 attagagttgtcaaaacgggccgg-ccatatggaccggcccgaaagtccgaataaaacgtagggtttgggccgaataattgcagcc 9201166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 19293567 - 19293515
Alignment:
Q  244 cccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaa 296  Q
    ||||||||||||| ||| | |||||||||||||||||||||||| ||||||||    
T  19293567 cccgttagggctatcccattcgggctccgggctgcccggaagcctgcaaaaaa 19293515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 29894597 - 29894509
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||| |||||||||| |||| || | |||||||||| ||||||||||||||| ||||| ||| | || || ||||| ||||||||    
T  29894597 ttagagctatcaaaatgggtcgggtcgaatgggccggcccaaaagcccgaataaaacgtaggacttggacctaaaaattgcagcccgaa 29894509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 6266236 - 6266350
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  6266236 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 6266334  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  6266335 ctttttagcccggccc 6266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 6142868 - 6142954
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccg 217  Q
    |||||||||||||||||  |||||| || ||||||| ||| |||| || ||||||| |||||  |||||||||||||||| ||||||    
T  6142868 tagagctgtcaaaatggatcgggccatacgggccggaccgaaaagtccaaataaaacgtaggatttaggccgaataattgcagcccg 6142954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 19293687 - 19293633
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaa 186  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||| |||||||    
T  19293687 tagagttgtcaaaatgggctgggccgtacgggccggcccgaaaaccctaataaaa 19293633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 3940791 - 3940823
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||||||||||||||||    
T  3940791 tccgggctgcccggaagcccgcaaaaaatacaa 3940823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 5927043 - 5927157
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||||||| ||||| ||| |||||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||    
T  5927043 tagagctgtcaaaacgggccggcccgtatgggtcggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaataggg 5927141  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  5927142 ctttttagcccggccc 5927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 356406 - 356448
Alignment:
Q  129 gattagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||    
T  356406 gattagagctgtcaaaacgggtcgggccgtatgggccggcccg 356448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 23222210 - 23222168
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaa 174  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||    
T  23222210 tagagatgtcaaaatgggccggcccgtatgggccggcccgaaa 23222168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 38231880 - 38231767
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||| ||||||| ||||| |||||||||    || |||||| |||| |||||||| |||| || |  | ||||||||| || || | |||    
T  38231880 tagagctgtcaaaacgggccggcccgtatgggccggccgtttagtccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 38231782  T
Q  232 tttttagcccggccc 246  Q
    |||||||||||||||    
T  38231781 tttttagcccggccc 38231767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 38894678 - 38894716
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggc 168  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  38894678 attagagctgtcaaaacgggccgggccgtatgggccggc 38894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 20823657 - 20823617
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||| ||| ||||||||| |||||||||||    
T  20823657 ttagagctgtcaaaacgggtcgggccgtatgggccggcccg 20823617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 31895088 - 31894974
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaag 229  Q
    ||||||||||||||| ||||||| || || || ||||||||   ||||||||| |||| |||||||| |||| ||  ||| ||||||||| || || | |    
T  31895088 ttagagctgtcaaaacgggccggcccatacggaccggcccgtttagcccgaat-aaatatagggcttgggcctaaatatt-gagcccgaattttaatagg 31894991  T
Q  230 gctttttagcccggccc 246  Q
    |||||||||||||||||    
T  31894990 gctttttagcccggccc 31894974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 5e-53; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 15065900 - 15066017
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  15065900 ttagagctgtcaaaatgagccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagaggg 15065999  T
Q  231 ctttttagcccggcccgt 248  Q
    ||||||||||||||||||    
T  15066000 ctttttagcccggcccgt 15066017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 301
Target Start/End: Original strand, 10997713 - 10997900
Alignment:
Q  131 ttagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||    
T  10997713 ttagagctgtcaaaatgggtcgggccgtaagggccgacccgaaagcccgaataaaatggagggcttgggccgaataattggagcccgaaattgaagaggg 10997812  T
Q  231 ctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||                 ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  10997813 ctttttagcccggcccgtaaaagcccttggcccgttatggctagcccgtccgggcttcgagctgcccggaagcccgcaaaaaatacaa 10997900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 130 - 301
Target Start/End: Complemental strand, 11369714 - 11369525
Alignment:
Q  130 attagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaa-ttgaagaa 228  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | || ||||||||||||||||||||||| || ||||     
T  11369714 attagagctgtcaaaatgggccgggccgtaagggtcagcccgaaagcccgaataaaatgtagagtttgggccgaataattggagcccgaaatttaaagag 11369615  T
Q  229 ggctttttagccc-----------------ggcccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11369614 ggctttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgcccgaaagcccgcaaaaaatacaa 11369525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 20139185 - 20139303
Alignment:
Q  129 gattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaa 228  Q
    ||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||| ||    |     
T  20139185 gattagagctgtcaaaacgggcccgcccgtatgggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccag 20139284  T
Q  229 ggctttttagcccggcccg 247  Q
    |||||||||||||||||||    
T  20139285 ggctttttagcccggcccg 20139303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 22193684 - 22193566
Alignment:
Q  129 gattagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaa 228  Q
    ||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||| ||    |     
T  22193684 gattagagctgtcaaaacgggcccgcccgtatgggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccag 22193585  T
Q  229 ggctttttagcccggcccg 247  Q
    |||||||||||||||||||    
T  22193584 ggctttttagcccggcccg 22193566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 12272341 - 12272226
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||  ||| | |||||||| ||    | |||    
T  12272341 tagagctgtcaaaatgggccgggccttacgggccggcccgaaagcccgaataaaatgtagggcctgggccgataaatagcagcccgaattttttcagggc 12272242  T
Q  232 tttttagcccggcccg 247  Q
    ||||||||||||||||    
T  12272241 tttttagcccggcccg 12272226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 27966886 - 27966772
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    |||||||||||||| ||| ||| ||||  |||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||| || ||    | |||    
T  27966886 tagagctgtcaaaacgggtcggaccgtgtgggccggcccgaaagcccgagtaaaatgtagggcttgggcctaataattgcagcccaaatttttccagggc 27966787  T
Q  232 tttttagcccggccc 246  Q
    |||||||||||||||    
T  27966786 tttttagcccggccc 27966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 31472592 - 31472534
Alignment:
Q  161 gggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||    
T  31472592 gggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaa 31472534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 31655663 - 31655576
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||  ||||| || |||| || ||||  ||||||||    
T  31655663 tagagctgtcaaaacgggccgggccgaatgggccagcccgaaagcccgaataaaacatagggtttgggcctaaaaattacagcccgaa 31655576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 15066048 - 15066080
Alignment:
Q  269 tccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||||||||||||||||||||||    
T  15066048 tccgggctgcccggaagcccgcaaaaaatacaa 15066080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 32465776 - 32465714
Alignment:
Q  138 tgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggcc 201  Q
    ||||||||  |||||| ||||| |||||| |||||||||||||| |||||||||||||| ||||    
T  32465776 tgtcaaaacaggccggtccgtacgggccgacccgaaagcccgaa-aaaatgtagggcttgggcc 32465714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 34178403 - 34178517
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    |||||||||||||| ||| ||||||||| |||||||||||   ||||||||| |||| |||||||| |||| || |  | |||||| || || || | ||    
T  34178403 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccaaattttaataggg 34178501  T
Q  231 ctttttagcccggccc 246  Q
    ||||||||||||||||    
T  34178502 ctttttagcccggccc 34178517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 3044290 - 3044340
Alignment:
Q  169 ccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||||||||| ||||| | ||||||||||| | ||||||||    
T  3044290 ccgaaagcccgaataaaatgcagggcctgggccgaataatagcagcccgaa 3044340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 15183892 - 15183854
Alignment:
Q  133 agagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  15183892 agagctgtcaaaacgggccgggccgtatgggccggcccg 15183854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 29641190 - 29641078
Alignment:
Q  134 gagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggct 232  Q
    |||||||||||| ||||||| ||||| |||||| ||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||||    
T  29641190 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaatagggct 29641092  T
Q  233 ttttagcccggccc 246  Q
    ||||||||||||||    
T  29641091 ttttagcccggccc 29641078  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 31511369 - 31511257
Alignment:
Q  134 gagctgtcaaaatgggccgggccgtaagggccggcccg-aaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggct 232  Q
    |||||||||||| ||||||| ||||| |||||| ||||   ||||||||| |||| |||||||| |||| || |  | ||||||||| || || | ||||    
T  31511369 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaat-aaatatagggcttgggcctaaaatattgagcccgaattttaatagggct 31511271  T
Q  233 ttttagcccggccc 246  Q
    ||||||||||||||    
T  31511270 ttttagcccggccc 31511257  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 29034634 - 29034590
Alignment:
Q  127 gagattagagctgtcaaaatgggccgggccgtaagggccggcccg 171  Q
    ||||||||||||||||||| |||||||||| |  |||||||||||    
T  29034634 gagattagagctgtcaaaacgggccgggccttccgggccggcccg 29034590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 132 - 301
Target Start/End: Complemental strand, 16769 - 16583
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaaggc 231  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||    
T  16769 tagagctgtcaaaatgggccgggccgtaaggtccggtctgaaagcccgaataaaatgtagggcttgggccgaataattgtagcccgaaattgaagagggc 16670  T
Q  232 tttttagcccggc-----------------ccgttagggctagcccgtccgggctccgggctgcccggaagcccgcaaaaaatacaa 301  Q
    |||||||||||||                 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16669 tttttagcccggcccgtaaaagcccttggcccgttagggctagcccgtccgggctccgggctgctcggaagcccgcaaaaaatacaa 16583  T

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Target: scaffold1449 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 1677 - 1590
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| || |||  |||||||  ||||||||    
T  1677 tagagctgtcaaaacgggccggcccgtatgggccggcccgaaagcccgaataaaatgtagggtttgggcttaataattttagcccgaa 1590  T

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Target: scaffold0295 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 6139 - 6255
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggcc-ggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaaattgaagaagg 230  Q
    ||||||||||||||||||||||||  || ||||| || |||| ||||||||||||||||||||| | ||| ||||||||| || ||||| ||    | ||    
T  6139 tagagctgtcaaaatgggccgggctttacgggcctgggccgatagcccgaataaaatgtagggcctgggcggaataattgcagtccgaattttttcaggg 6238  T
Q  231 ctttttagcccggcccg 247  Q
    |||||||||||||||||    
T  6239 ctttttagcccggcccg 6255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 3654 - 3742
Alignment:
Q  132 tagagctgtcaaaatgggccgggccgtaagggcc-ggcccgaaagcccgaataaaatgtagggcttaggccgaataattggagcccgaa 219  Q
    ||||||||||||||||||||||||  || ||||| |  |||| | ||||||||||||| ||||  | ||||||||||||| || |||||    
T  3654 tagagctgtcaaaatgggccgggctttacgggcctgtgccgataacccgaataaaatgcagggtctgggccgaataattgcagtccgaa 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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