View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21272_low_6 (Length: 318)

Name: NF21272_low_6
Description: NF21272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21272_low_6
NF21272_low_6
[»] chr1 (45 HSPs)
chr1 (1-311)||(34257764-34258073)
chr1 (48-149)||(34298381-34298482)
chr1 (55-208)||(38503272-38503424)
chr1 (48-149)||(398778-398879)
chr1 (48-145)||(9103585-9103682)
chr1 (68-136)||(16812508-16812576)
chr1 (95-160)||(9828036-9828101)
chr1 (71-160)||(39130769-39130858)
chr1 (110-162)||(1864880-1864932)
chr1 (111-186)||(9629875-9629951)
chr1 (95-146)||(9449024-9449075)
chr1 (113-183)||(44482240-44482311)
chr1 (110-160)||(28674807-28674857)
chr1 (99-160)||(2784552-2784613)
chr1 (48-176)||(6612156-6612285)
chr1 (95-160)||(7353495-7353560)
chr1 (94-163)||(10572588-10572657)
chr1 (111-160)||(14332644-14332693)
chr1 (67-160)||(20157352-20157445)
chr1 (95-160)||(21530681-21530746)
chr1 (48-160)||(22881618-22881724)
chr1 (48-160)||(1486711-1486823)
chr1 (84-160)||(2896123-2896199)
chr1 (94-162)||(13997874-13997942)
chr1 (83-158)||(5454127-5454202)
chr1 (111-182)||(6414981-6415052)
chr1 (95-162)||(10233245-10233312)
chr1 (48-186)||(47989443-47989581)
chr1 (48-158)||(609462-609572)
chr1 (102-160)||(22907341-22907399)
chr1 (110-160)||(25272489-25272539)
chr1 (94-160)||(36878452-36878518)
chr1 (98-160)||(40258935-40258997)
chr1 (111-160)||(7918213-7918262)
chr1 (111-160)||(16927187-16927236)
chr1 (111-160)||(22515889-22515938)
chr1 (113-181)||(25361896-25361965)
chr1 (111-160)||(34712385-34712434)
chr1 (111-160)||(39953148-39953197)
chr1 (111-160)||(40181879-40181928)
chr1 (111-160)||(41017406-41017455)
chr1 (123-160)||(45534192-45534229)
chr1 (110-146)||(15323170-15323206)
chr1 (111-155)||(16164322-16164366)
chr1 (48-160)||(41877472-41877584)
[»] chr7 (34 HSPs)
chr7 (101-185)||(15902820-15902905)
chr7 (48-160)||(1433399-1433511)
chr7 (49-160)||(11061078-11061189)
chr7 (111-160)||(3721101-3721150)
chr7 (94-160)||(9408336-9408402)
chr7 (71-160)||(26733272-26733361)
chr7 (74-160)||(19206021-19206107)
chr7 (94-160)||(20549782-20549848)
chr7 (57-182)||(24339596-24339722)
chr7 (94-163)||(5233620-5233689)
chr7 (111-160)||(7328693-7328742)
chr7 (48-161)||(17851376-17851489)
chr7 (71-160)||(27945009-27945098)
chr7 (109-184)||(35297649-35297725)
chr7 (65-136)||(598170-598241)
chr7 (68-159)||(2425736-2425827)
chr7 (97-160)||(3991318-3991381)
chr7 (113-148)||(8737118-8737153)
chr7 (111-149)||(5938480-5938518)
chr7 (83-149)||(10042917-10042983)
chr7 (94-160)||(22602712-22602778)
chr7 (111-161)||(27093414-27093464)
chr7 (111-161)||(27184837-27184887)
chr7 (110-160)||(38143230-38143280)
chr7 (88-149)||(11665453-11665514)
chr7 (111-160)||(16341504-16341553)
chr7 (123-160)||(18213035-18213072)
chr7 (94-155)||(22868033-22868094)
chr7 (111-160)||(23849460-23849509)
chr7 (111-160)||(24146824-24146873)
chr7 (94-186)||(32308111-32308204)
chr7 (123-160)||(39138464-39138501)
chr7 (112-156)||(13427585-13427629)
chr7 (84-148)||(29787383-29787447)
[»] scaffold0027 (1 HSPs)
scaffold0027 (48-160)||(46627-46739)
[»] chr4 (24 HSPs)
chr4 (56-160)||(35157987-35158091)
chr4 (48-150)||(903867-903969)
chr4 (48-150)||(36635269-36635371)
chr4 (48-160)||(23292988-23293100)
chr4 (55-147)||(27706192-27706284)
chr4 (102-160)||(5775360-5775418)
chr4 (55-160)||(40179638-40179743)
chr4 (83-156)||(40742571-40742644)
chr4 (48-160)||(12895276-12895388)
chr4 (48-136)||(19482613-19482701)
chr4 (48-160)||(33950081-33950193)
chr4 (110-160)||(21720509-21720559)
chr4 (111-160)||(8423720-8423769)
chr4 (71-136)||(20521875-20521940)
chr4 (112-160)||(9996849-9996897)
chr4 (109-160)||(6485613-6485664)
chr4 (101-152)||(21539877-21539928)
chr4 (76-150)||(22440612-22440686)
chr4 (111-160)||(7214524-7214573)
chr4 (95-160)||(36409514-36409578)
chr4 (95-160)||(36423680-36423744)
chr4 (111-160)||(54580025-54580074)
chr4 (92-160)||(2361977-2362045)
chr4 (56-88)||(32273588-32273620)
[»] chr3 (41 HSPs)
chr3 (48-160)||(11665889-11666001)
chr3 (48-160)||(15796296-15796408)
chr3 (110-160)||(7614417-7614467)
chr3 (66-135)||(12674528-12674597)
chr3 (111-160)||(28678311-28678360)
chr3 (64-160)||(8383218-8383314)
chr3 (68-148)||(25064874-25064954)
chr3 (83-155)||(32804547-32804619)
chr3 (89-160)||(4201382-4201453)
chr3 (68-186)||(16788977-16789096)
chr3 (83-162)||(29508424-29508503)
chr3 (98-160)||(7928445-7928507)
chr3 (89-186)||(8039810-8039908)
chr3 (52-150)||(16192762-16192860)
chr3 (85-150)||(12703989-12704054)
chr3 (94-163)||(17005618-17005687)
chr3 (95-160)||(18426941-18427006)
chr3 (111-160)||(49505156-49505205)
chr3 (48-140)||(10335308-10335400)
chr3 (72-136)||(24633736-24633799)
chr3 (48-147)||(4990982-4991081)
chr3 (111-150)||(11313812-11313851)
chr3 (83-150)||(11493373-11493440)
chr3 (78-149)||(14840304-14840375)
chr3 (109-160)||(15314878-15314929)
chr3 (94-165)||(26290362-26290433)
chr3 (48-98)||(7171447-7171497)
chr3 (66-160)||(25093465-25093559)
chr3 (48-136)||(750644-750733)
chr3 (111-160)||(1509547-1509596)
chr3 (71-160)||(8587023-8587112)
chr3 (123-160)||(8842349-8842386)
chr3 (110-147)||(10268501-10268538)
chr3 (111-164)||(10690260-10690313)
chr3 (111-148)||(15544701-15544738)
chr3 (111-148)||(27277852-27277889)
chr3 (111-160)||(45451561-45451610)
chr3 (111-160)||(55401083-55401132)
chr3 (94-150)||(1438795-1438851)
chr3 (111-147)||(21257001-21257037)
chr3 (111-182)||(34910325-34910397)
[»] chr2 (23 HSPs)
chr2 (48-148)||(28412295-28412395)
chr2 (48-160)||(34784984-34785096)
chr2 (49-150)||(21616708-21616809)
chr2 (78-159)||(23718001-23718082)
chr2 (78-159)||(24105673-24105754)
chr2 (110-150)||(32199152-32199192)
chr2 (65-160)||(15972835-15972930)
chr2 (78-147)||(30404865-30404934)
chr2 (111-160)||(34691807-34691856)
chr2 (111-160)||(34714219-34714268)
chr2 (48-160)||(30335362-30335474)
chr2 (110-158)||(30527599-30527647)
chr2 (94-162)||(31808068-31808136)
chr2 (111-181)||(18420414-18420485)
chr2 (109-160)||(40361756-40361807)
chr2 (115-176)||(2423881-2423943)
chr2 (98-160)||(5367188-5367249)
chr2 (83-136)||(2331774-2331827)
chr2 (49-138)||(34337200-34337289)
chr2 (111-160)||(44860328-44860377)
chr2 (110-150)||(36281692-36281732)
chr2 (76-148)||(36409641-36409713)
chr2 (110-162)||(39279682-39279734)
[»] chr6 (44 HSPs)
chr6 (66-160)||(9629346-9629440)
chr6 (48-160)||(7938061-7938173)
chr6 (65-160)||(5732512-5732607)
chr6 (66-160)||(5000628-5000722)
chr6 (48-162)||(32299220-32299334)
chr6 (111-160)||(7086803-7086852)
chr6 (76-161)||(9658852-9658937)
chr6 (64-149)||(17341677-17341761)
chr6 (111-160)||(26178683-26178732)
chr6 (48-160)||(9027123-9027235)
chr6 (48-147)||(8776988-8777087)
chr6 (71-146)||(34447374-34447449)
chr6 (59-157)||(4040422-4040520)
chr6 (48-150)||(10888986-10889088)
chr6 (111-172)||(15443703-15443765)
chr6 (111-160)||(7265595-7265644)
chr6 (55-160)||(7977832-7977937)
chr6 (111-160)||(9025496-9025545)
chr6 (111-160)||(9195756-9195805)
chr6 (48-133)||(12686423-12686507)
chr6 (48-176)||(16766642-16766771)
chr6 (71-160)||(34595102-34595191)
chr6 (110-184)||(5970085-5970160)
chr6 (102-157)||(25096422-25096477)
chr6 (83-160)||(4877922-4878000)
chr6 (94-160)||(19040343-19040409)
chr6 (71-157)||(30866149-30866235)
chr6 (71-136)||(853885-853950)
chr6 (111-160)||(7151420-7151469)
chr6 (71-136)||(8365545-8365610)
chr6 (111-148)||(8805586-8805623)
chr6 (48-176)||(9107355-9107484)
chr6 (111-160)||(9617442-9617491)
chr6 (111-156)||(10842540-10842585)
chr6 (111-160)||(11784218-11784267)
chr6 (83-160)||(20371112-20371189)
chr6 (111-160)||(24115849-24115898)
chr6 (110-163)||(25038070-25038123)
chr6 (111-160)||(33001291-33001340)
chr6 (48-136)||(426540-426628)
chr6 (110-154)||(5462693-5462737)
chr6 (48-160)||(10294052-10294164)
chr6 (111-147)||(17841604-17841640)
chr6 (48-160)||(21395310-21395421)
[»] chr5 (30 HSPs)
chr5 (83-160)||(22423814-22423891)
chr5 (111-182)||(11685947-11686018)
chr5 (51-160)||(12927602-12927711)
chr5 (83-155)||(7175026-7175098)
chr5 (92-140)||(26609342-26609390)
chr5 (65-160)||(16203797-16203892)
chr5 (111-162)||(17123056-17123107)
chr5 (111-162)||(23220991-23221042)
chr5 (43-136)||(6770483-6770576)
chr5 (111-160)||(36838551-36838600)
chr5 (92-160)||(28588676-28588744)
chr5 (113-160)||(14873527-14873574)
chr5 (48-160)||(15382422-15382536)
chr5 (111-162)||(23012408-23012459)
chr5 (111-150)||(35017045-35017084)
chr5 (111-149)||(5467991-5468029)
chr5 (57-182)||(21541984-21542110)
chr5 (111-176)||(40131629-40131695)
chr5 (111-160)||(3966511-3966560)
chr5 (111-160)||(6471891-6471940)
chr5 (94-155)||(27144454-27144515)
chr5 (111-160)||(30502390-30502439)
chr5 (111-160)||(30542733-30542782)
chr5 (110-146)||(12641681-12641717)
chr5 (111-147)||(14674277-14674313)
chr5 (111-159)||(17593725-17593773)
chr5 (64-160)||(21191058-21191154)
chr5 (83-147)||(22299496-22299559)
chr5 (110-158)||(30098333-30098381)
chr5 (48-160)||(36642764-36642875)
[»] scaffold0022 (1 HSPs)
scaffold0022 (94-156)||(90834-90896)
[»] chr8 (30 HSPs)
chr8 (94-160)||(4786340-4786406)
chr8 (48-146)||(7253516-7253614)
chr8 (110-160)||(11927088-11927138)
chr8 (56-181)||(22651929-22652055)
chr8 (71-160)||(11944633-11944722)
chr8 (111-160)||(14134707-14134756)
chr8 (76-162)||(3677759-3677845)
chr8 (94-160)||(15816131-15816197)
chr8 (110-160)||(33405386-33405436)
chr8 (101-162)||(7658461-7658522)
chr8 (111-160)||(13844598-13844647)
chr8 (48-176)||(29510289-29510418)
chr8 (48-160)||(2572058-2572170)
chr8 (47-163)||(11803203-11803319)
chr8 (111-159)||(39954282-39954330)
chr8 (111-150)||(14731720-14731759)
chr8 (48-119)||(24413603-24413674)
chr8 (111-158)||(34222955-34223002)
chr8 (49-99)||(18067989-18068039)
chr8 (113-163)||(22493504-22493554)
chr8 (111-176)||(25172683-25172749)
chr8 (111-160)||(8342980-8343029)
chr8 (110-143)||(12936510-12936543)
chr8 (111-160)||(12985400-12985449)
chr8 (111-160)||(20873077-20873126)
chr8 (111-156)||(34897093-34897138)
chr8 (111-147)||(8343324-8343360)
chr8 (110-150)||(13018288-13018328)
chr8 (92-140)||(27101504-27101552)
chr8 (111-159)||(31236580-31236628)
[»] scaffold0168 (1 HSPs)
scaffold0168 (50-158)||(20990-21098)
[»] scaffold0036 (1 HSPs)
scaffold0036 (101-160)||(9749-9808)
[»] scaffold0697 (1 HSPs)
scaffold0697 (95-160)||(1636-1701)
[»] scaffold0122 (1 HSPs)
scaffold0122 (123-163)||(7540-7580)
[»] scaffold0053 (1 HSPs)
scaffold0053 (48-160)||(8743-8855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (112-182)||(53189-53260)
[»] scaffold0024 (1 HSPs)
scaffold0024 (110-149)||(68255-68294)
[»] scaffold0021 (1 HSPs)
scaffold0021 (48-147)||(130427-130526)
[»] scaffold0236 (1 HSPs)
scaffold0236 (110-160)||(25770-25820)
[»] scaffold0306 (1 HSPs)
scaffold0306 (71-136)||(13368-13433)
[»] scaffold0152 (1 HSPs)
scaffold0152 (71-136)||(21894-21959)
[»] scaffold0020 (1 HSPs)
scaffold0020 (111-160)||(135314-135363)
[»] scaffold0011 (1 HSPs)
scaffold0011 (111-160)||(17751-17800)
[»] scaffold0003 (1 HSPs)
scaffold0003 (71-148)||(241562-241639)
[»] scaffold0722 (1 HSPs)
scaffold0722 (111-147)||(7047-7083)
[»] scaffold0223 (1 HSPs)
scaffold0223 (71-147)||(20140-20216)
[»] scaffold0136 (1 HSPs)
scaffold0136 (48-88)||(3928-3968)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 34258073 - 34257764
Alignment:
Q  1 ataaaataataaatgtttactttcc--cattgaattgaagttgtcaacttatgaaacacggatatggacacagacaccagacatgacacggatattgaca 98  Q
    |||||||||||||||||||  ||||  ||||||| ||||| | ||||| ||||||||| ||| ||||||| ||||| | ||||||| |||||||||||||    
T  34258073 ataaaataataaatgtttaacttcctccattgaaatgaagctatcaacctatgaaacatggacatggacatagacatcggacatgatacggatattgaca 34257974  T
Q  99 caccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgttcgatgtcggacatgacacatgtttgatgccatga 198  Q
    |  |||| || |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||||  ||||||||| ||     | ||||||    
T  34257973 cgtcgacaccgttaataatttaataaaatcacataatttagtgtaattatatatgtcggttttgttcggtgtccaacatgacacgtg-----taccatga 34257879  T
Q  199 cacacctaattcaaagagtgta--tgtttcatagctatcaactaatcttaggaaaatgaatgatatgatatttaatatcaagtttgagtggcatacctta 296  Q
    |||  ||||| |||| ||||||  ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  34257878 cacgtctaatccaaaaagtgtatgtgtttcatagctatcaactaatcttggaacaatgaatgatatgatatttaatatcaagtttgagtggcatacctta 34257779  T
Q  297 atacctatccagttc 311  Q
    ||||||||| |||||    
T  34257778 atacctatctagttc 34257764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 34298381 - 34298482
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||||||| ||||  |||||  |||||||||| |||||||| | |||||||||||| ||| ||||||||||| |||||||||||||| ||| ||||||    
T  34298381 tatgaaacaccgatacagacacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T
Q  148 ta 149  Q
    ||    
T  34298481 ta 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 208
Target Start/End: Original strand, 38503272 - 38503424
Alignment:
Q  55 cacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgt 154  Q
    |||||||| |||||| |||||  ||||||||||||| | | |||||||||| ||  ||||||||||| ||||||| ||| || ||| ||||||||| |||    
T  38503272 cacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgt 38503371  T
Q  155 cggtgttgt-tcgatgtcggacatgacacatgtttgatgccatgacacacctaat 208  Q
    ||||||  | |||  |||||||||||||||||| ||| ||   ||||||||||||    
T  38503372 cggtgtcctgtcg--gtcggacatgacacatgtctgacgcagggacacacctaat 38503424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 398879 - 398778
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||| | |||||| |||| |||||||| | |||||| ||||| ||  ||||||||||| |||||||||||||| ||| ||||||    
T  398879 tatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T
Q  148 ta 149  Q
    ||    
T  398779 ta 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 9103585 - 9103682
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataat 145  Q
    |||||| |||||||||||||||  ||||| |||| ||| |||| | |||||| ||||| |  |||||||||||| |||||||||||||||||| ||||    
T  9103585 tatgaagcacggatatggacacgaacacctgacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaat 9103682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 16812508 - 16812576
Alignment:
Q  68 acagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||||| | |||||||||||| | |||||||||||| ||| ||||||||||| ||||||||||||||    
T  16812508 acagacactaaacatgacacggacactgacacaccgacaccaataataatttgacaaaatcacataatt 16812576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 9828036 - 9828101
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| ||||| ||| |||||||||||||||||||||||||| ||| ||||| ||| |||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgt 9828101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 39130858 - 39130769
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| |||| |||| |||||||||||| | ||| | ||||||||||| | ||||| | |||||||||| ||||||||| |||||||||    
T  39130858 gacaccggacacgacatggatattgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtgtcggtgt 39130769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 1864932 - 1864880
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||||||||| |||||||||||||| ||| ||||||||| |||||||||||    
T  1864932 ttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 9629951 - 9629875
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacacatgt 186  Q
    ||||||||||||||||||| |||||| ||| | ||||||  ||||||||| || ||||||||||||| |||||||||    
T  9629951 taataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgt 9629875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 9449075 - 9449024
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataatt 146  Q
    |||||||| || ||||||||||||||| |||||||||||||| |||||||||    
T  9449075 gacacaccaacaccattaataatttgaaaaaatcacataattcagtataatt 9449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 44482240 - 44482311
Alignment:
Q  113 ataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacaca 183  Q
    ||||||||| |||||||||||||| ||| ||||||||| ||||||||| || ||| ||||||||| ||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacaca 44482311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 28674807 - 28674857
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  28674807 ttaataatttgagaaaattacataattcagtataattatatatgttggtgt 28674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 2784552 - 2784613
Alignment:
Q  99 caccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||| || |||| ||||| | |||||||||||||| ||||||||||||| |||||||||    
T  2784552 caccgacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggtgt 2784613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 6612285 - 6612156
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||| |||| ||||||  ||||| |||| |||||||| | |||||| ||||  |  |||||||||||| ||||| |||||||| ||| ||||||    
T  6612285 tatgaagcacagatacggacacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaatta 6612186  T
Q  148 tatatgtcggtgttgt-tcgatgtcggaca 176  Q
     |  ||||||||| || |||||||||||||    
T  6612185 caagtgtcggtgtcgtgtcgatgtcggaca 6612156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 7353560 - 7353495
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||   || ||||| || ||||| |||||||||||| |||||||||||||||||||    
T  7353560 gacacaccgacgctgctattaattcgaaaaaattacataatttagtgtaattatatatgtcggtgt 7353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 10572657 - 10572588
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt 163  Q
    |||||| ||||| ||| ||||||||||| ||||||||||||||  || |||||| || ||||||||||||    
T  10572657 tgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgt 10572588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 14332693 - 14332644
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| ||||||||| | |||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgtctcggtgt 14332644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 20157445 - 20157352
Alignment:
Q  67 cacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||| |||| |||||||  | ||||||| |||| ||  ||||||| ||| |||||||||||||| ||| |||| |||| |||||||||    
T  20157445 cacagacaccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgt 20157352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 21530681 - 21530746
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| ||||| || |||||||||||| ||||||| ||||||| |||||||||||  |||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgt 21530746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 22881724 - 22881618
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||| ||||| |||||| |||| |||||      |||||| ||||| | | ||||||||||| |||||||||||||||||| ||||||    
T  22881724 tatgaagcacggatatagacacggacaccggacacgacac------tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  22881630 caagtgtcggtgt 22881618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 1486823 - 1486711
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| |||||| || ||| || | |||||||||| |||||| | ||| |   ||||||||||| |||||||||||||| ||| ||||||    
T  1486823 tatgaagcatggatacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 1486724  T
Q  148 tatatgtcggtgt 160  Q
    ||  |||||||||    
T  1486723 taagtgtcggtgt 1486711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 2896199 - 2896123
Alignment:
Q  84 acacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||| | |||||| ||||| ||  ||||||||||| |||||||||||||| ||| ||  |||||||||||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgt 2896123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 13997874 - 13997942
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||| ||||| || ||||| |||| | |||||||||||||| ||| ||||||||| |||||||||||    
T  13997874 tgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttg 13997942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 5454202 - 5454127
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggt 158  Q
    |||||||| |||||||| ||  ||||  || |||||||| |||||||||||||| | |||||||||||||| ||||    
T  5454202 gacacggacattgacacgccagcgccgatattaatttgaaaaaatcacataattaaatataattatatatgccggt 5454127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 6415052 - 6414981
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgttcgatgtcggacatgacac 182  Q
    |||| |||||| |||||||||||||  ||| |||||| || |||||||||  |||||||||||||| |||||    
T  6415052 taattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcattcgatgtcggacacgacac 6414981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 10233245 - 10233312
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||||| || ||| |||||| |||| |||||||||||||| ||| ||||||||| |||| ||||||    
T  10233245 gacacaccaacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttg 10233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 47989443 - 47989581
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || |||||  ||||| || |||||||| ||||| || | |||||| ||||| | || |||||||| | |||||||||||||| ||| ||||||    
T  47989443 tatgaagcatggatacagacacggataccagacacgacacagacactgacacgccgacacaat-aataatttaaaaaaatcacataattcagtgtaatta 47989541  T
Q  148 tatatgtcggtgttgt-tcgatgtcggacatgacacatgt 186  Q
     |  ||||||||| || ||| ||||||||| |||||||||    
T  47989542 caagtgtcggtgtcgtgtcggtgtcggacacgacacatgt 47989581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 609572 - 609462
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||| ||| ||||||||||| | |||| ||||   | | |||||| ||||| ||| ||||||||||| ||||| |||||||| |  ||||| |    
T  609572 tatgaagcacgtatacggacacagacatcggacacgacatcaacactgacacgccgacaccactaataatttgagaaaattacataattcaacataatca 609473  T
Q  148 tatatgtcggt 158  Q
    |||||||||||    
T  609472 tatatgtcggt 609462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 22907399 - 22907341
Alignment:
Q  102 cgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||| |||||||||||| ||||| | ||||||| |||||||||||  |||||||||    
T  22907399 cgacgccgttaataatttgagaaaattatataatttggtataattataagtgtcggtgt 22907341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 25272489 - 25272539
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||| ||||||| |||||||||||||||||| ||||||||  |||||||||    
T  25272489 ttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgt 25272539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 36878452 - 36878518
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| ||||| ||  ||||||||||| |||||||||||||| ||| ||||||||  |||||||||    
T  36878452 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 40258997 - 40258935
Alignment:
Q  98 acaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||| | ||||||||||||| |||||||||||||| ||| |||||| |  |||||||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 40258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 7918262 - 7918213
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| |||| ||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgt 7918213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 16927236 - 16927187
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||||| |||||    
T  16927236 taataatttgaaaaaatcatataattcagtgtaattatatatgttggtgt 16927187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 22515938 - 22515889
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 22515889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 25361896 - 25361965
Alignment:
Q  113 ataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgaca 181  Q
    ||||||||| |||||||||||||| ||| ||||||||| |||| |||| || ||| ||||||||| ||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca 25361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 34712434 - 34712385
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||| ||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtcagtgt 34712385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 39953197 - 39953148
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| | |||||||||||||||||| ||||| ||| |||||||||    
T  39953197 taataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgt 39953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 40181879 - 40181928
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| | |||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgt 40181928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 41017455 - 41017406
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||| |||||||||| | ||||||||||||| |||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaattatatatgttggtgt 41017406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 45534229 - 45534192
Alignment:
Q  123 aaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  45534229 aaaatcacataatttagtgtaagtatatatgtcggtgt 45534192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 15323170 - 15323206
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataatt 146  Q
    |||||||||||| |||||||||||||||||| |||||    
T  15323170 ttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    ||||||||||| |||||||||||||||| | ||||||||| ||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 41877584 - 41877472
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||||  || |||||||| ||||| || | ||  || ||||| ||  ||||||||||| ||||| |||||||||||| ||||||    
T  41877584 tatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  41877484 caagtgtcggtgt 41877472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 15902820 - 15902905
Alignment:
Q  101 ccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacacatg 185  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | ||||||| ||||||||    
T  15902820 ccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatg 15902905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 1433399 - 1433511
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| || ||| ||||||  ||| |||||||| |||||||| ||||| || |||||||||||| |||||||||| |||| || ||||||    
T  1433399 tatgaagcacggatacgggcacggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaatta 1433498  T
Q  148 tatatgtcggtgt 160  Q
    ||| |||||||||    
T  1433499 tatgtgtcggtgt 1433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 11061189 - 11061078
Alignment:
Q  49 atgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattat 148  Q
    ||||| |||||||| |||||| |||| | || | |||||||| | |||||||||||| |   ||||||||||| |||||||||||||||||||||||||     
T  11061189 atgaagcacggatacggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattac 11061090  T
Q  149 atatgtcggtgt 160  Q
    |  |||||||||    
T  11061089 aagtgtcggtgt 11061078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 3721101 - 3721150
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgt 3721150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 9408402 - 9408336
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  9408402 tgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 9408336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 26733272 - 26733361
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||| | ||||||  |||| ||  ||||||||||| |||||||||||||| ||| |||||| || |||||||||    
T  26733272 gacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgt 26733361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 19206021 - 19206107
Alignment:
Q  74 accagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||| |||||||| |   |||| ||||| ||  ||||||||||| |||||||||||||| | ||||||||||| |||||||||    
T  19206021 accagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 20549782 - 20549848
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||| ||  ||||||||||| |||||||| ||||| ||| ||||||||| |||||||||    
T  20549782 tgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 24339596 - 24339722
Alignment:
Q  57 cggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    |||||| ||| || |||||| |||| |||| ||| |||||||| ||||| |   ||||||||||| |||||||||||||| ||| |||||| |  |||||    
T  24339596 cggatacggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T
Q  157 gtgttgt-tcgatgtcggacatgacac 182  Q
    |||| || ||| ||||||||| |||||    
T  24339696 gtgtcgtgtcggtgtcggacacgacac 24339722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 5233620 - 5233689
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt 163  Q
    |||||||||||  |  |||||||||||| ||||||||||||| |||| ||||||||| ||| ||||||||    
T  5233620 tgacacaccgatacggttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgt 5233689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 7328742 - 7328693
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcggtgt 7328693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 17851376 - 17851489
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||  ||||| |||||| |||| |||| |||||  |||||| |||  ||  ||||||||| | |||||||||||||| ||| ||||||    
T  17851376 tatgaagcacggatacagacacggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaatta 17851475  T
Q  148 tatatgtcggtgtt 161  Q
    ||| |||| |||||    
T  17851476 tatgtgtctgtgtt 17851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 27945009 - 27945098
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| |||| |||||||| | |||||| ||||| ||| ||||||||||| ||||| |||||||| ||| |||||| |  |||||||||    
T  27945009 gacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgt 27945098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 35297725 - 35297649
Alignment:
Q  109 attaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacacat 184  Q
    ||||||||||||| |||||||||||||| | ||||||||||| ||| ||||| || | ||||||| |||| ||||||    
T  35297725 attaataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgttgatgtcgaacataacacat 35297649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 598170 - 598241
Alignment:
Q  65 gacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    ||||| |||||||||||||||||||| | ||||||| |||| ||  ||||||||| | |||||||| |||||    
T  598170 gacacggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaatt 598241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 2425827 - 2425736
Alignment:
Q  68 acagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtg 159  Q
    ||||||||  |||| ||||| |||| |||||| ||| | || |||||||||||| |||||||||||||| |||  || ||||| ||||||||    
T  2425827 acagacactggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcggtg 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 3991318 - 3991381
Alignment:
Q  97 cacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| | | ||||||||||| |||||||||||||| |||||||||| |  |||||||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgt 3991381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 8737153 - 8737118
Alignment:
Q  113 ataatttgataaaatcacataatttagtataattat 148  Q
    |||||||||||||||||||||||| |||||||||||    
T  8737153 ataatttgataaaatcacataattcagtataattat 8737118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 5938480 - 5938518
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattata 149  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  5938480 taataatttgataaaataacataattcagtataattata 5938518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 10042917 - 10042983
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattata 149  Q
    |||||||| | | |||| ||||| ||| ||||||||||||||| |||||||||||||  ||||||||    
T  10042917 gacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattata 10042983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 22602778 - 22602712
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| ||||| || | ||| |||||| |||||||||||||| ||| ||||||||| |||||||||    
T  22602778 tgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 22602712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 27093464 - 27093414
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgtt 161  Q
    ||||||||| | |||||||||||||||||| |||||||||  |||||||||    
T  27093464 taataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgtt 27093414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 27184837 - 27184887
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgtt 161  Q
    ||||||||| | |||||||||||||||||| |||||||||  |||||||||    
T  27184837 taataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgtt 27184887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 38143230 - 38143280
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||| |||||||||||||||| | ||||||||| ||| |||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgt 38143280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 11665514 - 11665453
Alignment:
Q  88 ggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattata 149  Q
    |||||||||||| | ||| | | ||||||||||| |||||||||||||| ||| ||||||||    
T  11665514 ggatattgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattata 11665453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 16341504 - 16341553
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| || ||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtgccggtgt 16341553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 18213072 - 18213035
Alignment:
Q  123 aaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  18213072 aaaatcacataatttagtgtaattatatgtgtcggtgt 18213035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 22868033 - 22868094
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    |||||| ||||| ||| ||||||| ||| |||||||||||||| ||| ||||||||| ||||    
T  22868033 tgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 23849509 - 23849460
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| | |||| ||||||||| ||||||||||||| |||||||||    
T  23849509 taataatttaagaaaaacacataattcagtataattatatgtgtcggtgt 23849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 24146824 - 24146873
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| | |||||||||||||| | ||||||||||| |||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtgtcggtgt 24146873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 32308111 - 32308204
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacacatgt 186  Q
    |||||| ||||| ||  ||||||||||| |||||||||||||| ||| ||||| ||| |||| |||| || ||| ||| ||||| |||||||||    
T  32308111 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgt 32308204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 39138464 - 39138501
Alignment:
Q  123 aaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  39138464 aaaatcacataattcagtgtaattatatatgtcggtgt 39138501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 13427585 - 13427629
Alignment:
Q  112 aataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    |||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  13427585 aataatttgaaaaaatgacataatttagtataatcatagatgtcg 13427629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 29787447 - 29787383
Alignment:
Q  84 acacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattat 148  Q
    ||||||| ||| |||| ||||| ||  ||||||||||| |||||||||||||| ||| |||||||    
T  29787447 acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 46627 - 46739
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||||| |||| | |||| |||||||| | |||||| ||||| |  |||||||||||| |||||||||||||| ||| ||||||    
T  46627 tatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T
Q  148 tatatgtcggtgt 160  Q
     | ||||||||||    
T  46727 caaatgtcggtgt 46739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 35158091 - 35157987
Alignment:
Q  56 acggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    ||||||| |||||| |||||| ||||  ||||||| | |||||| ||||||| | ||||||||||  |||||||||||||||||| ||||||||  ||||    
T  35158091 acggatacggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtc 35157992  T
Q  156 ggtgt 160  Q
    |||||    
T  35157991 ggtgt 35157987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 903867 - 903969
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||||| | | |||||||| | ||||| | |||||||||| | || |||||||||||| |||||||||||||| ||| ||||||    
T  903867 tatgaagcacggatacggacacgggcgccagacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatta 903966  T
Q  148 tat 150  Q
    |||    
T  903967 tat 903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 36635269 - 36635371
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| ||||||||||||| |||| ||| |||| | |||||| || || ||| ||||||||||| |||||||||||||| ||| ||||||    
T  36635269 tatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T
Q  148 tat 150  Q
    |||    
T  36635369 tat 36635371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 23293100 - 23292988
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||| |||| |||||| |||||| |||| |||||||| | |||||| ||||| |   ||||||||||| |||||||||||||| ||||||||||    
T  23293100 tatgaagcacagatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatta 23293001  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  23293000 caagtgtcggtgt 23292988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 27706284 - 27706192
Alignment:
Q  55 cacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||||| |||||| ||||||||||| |||| ||| | ||||||  |||| | ||||||||||| | |||||||||||||||||| ||||||    
T  27706284 cacggatacggacacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 5775418 - 5775360
Alignment:
Q  102 cgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||| ||||||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 40179743 - 40179638
Alignment:
Q  55 cacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgt 154  Q
    |||| ||| |||| ||||||||  |||||||||||| | ||||||   ||| ||||||||| ||||| |||||||||||||| ||| |||||||||  ||    
T  40179743 cacgcatacggactcagacaccgaacatgacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgt 40179644  T
Q  155 cggtgt 160  Q
    ||||||    
T  40179643 cggtgt 40179638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 40742571 - 40742644
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    |||||||| ||||| || ||||| ||||||||||||||| ||||||| ||||| |||| ||||||||| |||||    
T  40742571 gacacggacattgaaacgccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcg 40742644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 12895388 - 12895276
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||||||| |||| ||| || |||||| || | |||||| | | |||||| ||||| | | ||||||||||| ||||||||||||||| || ||||||    
T  12895388 tatgaaacacagatacggatacggacaccggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaatta 12895289  T
Q  148 tatatgtcggtgt 160  Q
    ||  |||||||||    
T  12895288 taagtgtcggtgt 12895276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 19482613 - 19482701
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||| |||||||| | |||||||||||||||| ||||| || | |||||| ||||| | | ||||||||||| || |||||||||||    
T  19482613 tatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataatt 19482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 33950081 - 33950193
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||| || | |||| |||||||||||| ||||| | | ||||||  | |||||  ||||||||||| |||||||||||||||| | |||| |    
T  33950081 tatgaagcacgggtacgaacacggacaccagacataacacgaacactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaatca 33950180  T
Q  148 tatatgtcggtgt 160  Q
    ||| |||||||||    
T  33950181 tatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 21720559 - 21720509
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  21720559 ttaataatttgataaaatcatataatttaatgtaactatatatgtcggtgt 21720509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 8423769 - 8423720
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| |||||||| ||||||||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaattataaatgtcggtgt 8423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 20521940 - 20521875
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    ||||||||||| |||||||| | |||||| ||||  ||  ||||||||||||||||||||||||||    
T  20521940 gacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataatt 20521875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 9996849 - 9996897
Alignment:
Q  112 aataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||| |||||||||||||| ||||||||||||| | |||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggtgt 9996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 6485664 - 6485613
Alignment:
Q  109 attaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  6485664 attaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 21539928 - 21539877
Alignment:
Q  101 ccgacgccattaataatttgataaaatcacataatttagtataattatatat 152  Q
    ||||| ||||||||||||| | ||||||| |||||||||| |||||||||||    
T  21539928 ccgacaccattaataatttaagaaaatcatataatttagtgtaattatatat 21539877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 22440686 - 22440612
Alignment:
Q  76 cagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatat 150  Q
    |||||| |||| ||| | ||| ||| |||| || |||||||||||| |||||||||||||| ||| |||||||||    
T  22440686 cagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatat 22440612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 7214573 - 7214524
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||| | |||||||||  ||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgt 7214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 36409578 - 36409514
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| ||||| |||||||||||| || ||| |||||||||||||| ||||||||  |||||||||    
T  36409578 gacacgccgacaccattaataatt-gaaaaagtcacataatttagtgtaattataggtgtcggtgt 36409514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 36423744 - 36423680
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| ||||| |||||||||||| || ||| |||||||||||||| ||||||||  |||||||||    
T  36423744 gacacgccgacaccattaataatt-gaaaaagtcacataatttagtgtaattataggtgtcggtgt 36423680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 54580074 - 54580025
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||  |||||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 2362045 - 2361977
Alignment:
Q  92 attgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||| |   ||||||||||| ||||| |||||||||||| |||||| |  |||||||||    
T  2362045 attgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgt 2361977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 32273620 - 32273588
Alignment:
Q  56 acggatatggacacagacaccagacatgacacg 88  Q
    ||||||||||||||||||||| |||||||||||    
T  32273620 acggatatggacacagacaccggacatgacacg 32273588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 11665889 - 11666001
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||| ||||||| ||||||||| |||| |||||  | | | ||||||||||  |  ||||||||||||||||||||| |||||||| ||||||    
T  11665889 tatgaagcacgaatatggatacagacaccggacacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaatta 11665988  T
Q  148 tatatgtcggtgt 160  Q
    ||| |||||||||    
T  11665989 tatgtgtcggtgt 11666001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 15796408 - 15796296
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||||||||| |||||| |||| |||||||| | |||||| ||||| |  |||||||||||| ||||||| |||||| ||| ||||||    
T  15796408 tatgaagcacggatatggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatta 15796309  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  15796308 caattgtcggtgt 15796296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 7614467 - 7614417
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||||    
T  7614467 ttaataatttaagaaaatcacataattcagtataattatatatgtcggtgt 7614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 12674597 - 12674528
Alignment:
Q  66 acacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataat 135  Q
    |||||||||||||||| |||||||| |||||||||||||| |   ||||||||||| ||||||| |||||    
T  12674597 acacagacaccagacacgacacggacattgacacaccgacactgctaataatttgagaaaatcaaataat 12674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 28678311 - 28678360
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  28678311 taataatttaataaaatcacataatttagtataattgtatgtgtcggtgt 28678360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 8383218 - 8383314
Alignment:
Q  64 ggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| |||||  |||| |||||||| |||||||| ||||| ||  ||||||||||| ||||||| |||||| ||| ||||||||  |||||||||    
T  8383218 ggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgt 8383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 25064874 - 25064954
Alignment:
Q  68 acagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattat 148  Q
    ||||||||| |||| ||||| || |||||||| ||||| ||  |||| |||||| |||||||||||||||||| |||||||    
T  25064874 acagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 32804619 - 32804547
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    |||||||  |||||||  ||||| || |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32804619 gacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 4201382 - 4201453
Alignment:
Q  89 gatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||| | ||| || || |||||||||||| |||||||||||||| ||| ||||||||||||| |||||    
T  4201382 gatattgatataccaacaccgttaataatttgaaaaaatcacataattaagtgtaattatatatgttggtgt 4201453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 16788977 - 16789096
Alignment:
Q  68 acagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcg 166  Q
    |||||||||||| |||||||||||| ||| |||||||     |||||||||| | ||||||| |||||| ||| ||||||||  ||| ||||| || ||     
T  16788977 acagacaccagatatgacacggatactgatacaccgatatagttaataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtca 16789076  T
Q  167 atgtcggacatgacacatgt 186  Q
     |||||||||||||||||||    
T  16789077 gtgtcggacatgacacatgt 16789096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 29508424 - 29508503
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||| ||| |||||||||||||  ||| ||||||||||| ||||||| |||||| ||| ||||||||| ||||| |||||    
T  29508424 gacatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttg 29508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 7928445 - 7928507
Alignment:
Q  98 acaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||| ||  ||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 8039908 - 8039810
Alignment:
Q  89 gatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacacatgt 186  Q
    ||||||||||| || || ||  ||||||||||| ||||| | |||||| ||| ||||||||| ||||||||| || ||| |||||||||||| ||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgt 8039810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 16192860 - 16192762
Alignment:
Q  52 aaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||||| |||||  |||| | |||||||| | |||   ||||||||||| || |||||||||||| ||||| |||||||| ||| |||||||||    
T  16192860 aaacacggatacggacaaggacatcggacatgactcagatgccgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatat 16192762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 12703989 - 12704054
Alignment:
Q  85 cacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||| ||||| ||||| ||| ||||||||||| |||| ||||||||| ||| |||||||||    
T  12703989 cacggatatggacacgccgacaccactaataatttgagaaaagcacataattcagtgtaattatat 12704054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 17005687 - 17005618
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt 163  Q
    |||| |||| || ||| ||||||||||||||||||| |||||| ||| ||||||||  ||||||||||||    
T  17005687 tgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgt 17005618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 18426941 - 18427006
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| ||||| ||| ||||||||| | ||||||||||||||  || |||||||||||||||||||    
T  18426941 gacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgt 18427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 49505205 - 49505156
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||| ||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgt 49505156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 10335400 - 10335308
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagt 140  Q
    |||||| |||||||| | |||| |||||| |||| |||||||| | |||||| ||||| | | ||||||||||| ||| ||||||| ||||||    
T  10335400 tatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagt 10335308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 24633736 - 24633799
Alignment:
Q  72 acaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    ||||||||||||||||||| || ||||  ||||| ||| ||||||||||| ||||||||||||||    
T  24633736 acaccagacatgacacggacat-gacatgccgacaccactaataatttgagaaaatcacataatt 24633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 4991081 - 4990982
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||| ||| |||||| ||||||  ||| |||||||| | |||||| ||||| ||  ||||| ||||| ||||| |||||||| ||| ||||||    
T  4991081 tatgaaacacgtatacggacacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaatta 4990982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 11313851 - 11313812
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatat 11313812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 11493440 - 11493373
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatat 150  Q
    |||||||| ||||||||  |||| ||| ||||||| ||| |||||||||||||| ||| |||||||||    
T  11493440 gacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattatat 11493373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 14840375 - 14840304
Alignment:
Q  78 gacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattata 149  Q
    |||| ||||||||||  ||||| || || ||||||||||||| | |||||||||||||| ||| ||||||||    
T  14840375 gacacgacacggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 15314929 - 15314878
Alignment:
Q  109 attaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||| |||||||| |||||||||||||||||| ||||||||| ||| |||||    
T  15314929 attattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgt 15314878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 26290362 - 26290433
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttgttc 165  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||  || ||||||||| |||| |||| ||||    
T  26290362 tgacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgttc 26290433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 7171447 - 7171497
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgaca 98  Q
    |||||| |||||||| ||||||||||||| |||| |||||||||| |||||    
T  7171447 tatgaagcacggatacggacacagacaccggacacgacacggatactgaca 7171497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 25093465 - 25093559
Alignment:
Q  66 acacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||| ||||| || | | |||| ||||| |  ||||| |||||| ||||||||| |||| ||| ||||||||| |||||||||    
T  25093465 acacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 750733 - 750644
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggata-ttgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||| |||||||| |||||| |||||| |||| |||||||| | |||||||  |||| | | ||||||||||| || |||||||||||    
T  750733 tatgaagcacggatacggacacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataatt 750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 1509547 - 1509596
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  1509547 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 1509596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 8587112 - 8587023
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| ||||||||||||| | |||||| ||||| |   || |||||||| |||||||||||||| ||| |||||| |  |||||||||    
T  8587112 gacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgt 8587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 8842349 - 8842386
Alignment:
Q  123 aaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||||| || |||||||||||||||||||    
T  8842349 aaaatcacataatttggtgtaattatatatgtcggtgt 8842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 10268538 - 10268501
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataatta 147  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  10268538 ttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 10690313 - 10690260
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgtt 164  Q
    ||||||| ||| |||||||||||||| ||| ||||||||| ||||||| |||||    
T  10690313 taataatctgagaaaatcacataattcagtgtaattatatttgtcggtattgtt 10690260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 15544701 - 15544738
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattat 148  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  15544701 taataatttgataaaatcacataattctgtataattat 15544738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattat 148  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 45451561 - 45451610
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||||||||| || |||||||| |||| |||||||||    
T  45451561 taataatttgagaaaatcacatacttcagtataataatatgtgtcggtgt 45451610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 55401083 - 55401132
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 55401132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 1438795 - 1438851
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||||||  |  ||| ||||||| |||||||||||||| |||||||||||||    
T  1438795 tgacacaccgacatcgctaacaatttgagaaaatcacataattcagtataattatat 1438851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 21257037 - 21257001
Alignment:
Q  111 taataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  21257037 taataatttgaaaaaatcacataattcagtataatta 21257001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 34910325 - 34910397
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacac 182  Q
    ||||||||||| |||||||||||||| ||| |||||| |   |||||||| || ||| |||||||||||||||    
T  34910325 taataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacac 34910397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 28412295 - 28412395
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||| |||||||||| ||||||||||| |||||||| | | ||||  | || || ||||||||||||||||||||||||||| ||| ||||||    
T  28412295 tatgaagcacgaatatggacacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaatta 28412394  T
Q  148 t 148  Q
    |    
T  28412395 t 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 34785096 - 34784984
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||| |||| |||||| ||| ||||||| |||||||| | |||||||||||| | | ||||  ||| | |||||||||||||||||| ||||||    
T  34785096 tatgaagcacagatacggacacggaccccagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaatta 34784997  T
Q  148 tatatgtcggtgt 160  Q
    ||| |||||||||    
T  34784996 tatgtgtcggtgt 34784984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 21616708 - 21616809
Alignment:
Q  49 atgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattat 148  Q
    ||||| |||||||| ||||||||||||  |||| |||||||| |  ||||| ||||| ||  ||||||||||| |||||||||||||| ||| |||||||    
T  21616708 atgaagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 21616807  T
Q  149 at 150  Q
    ||    
T  21616808 at 21616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 23718001 - 23718082
Alignment:
Q  78 gacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtg 159  Q
    ||||||||||||| | |||||||||||| ||  ||||||||||| ||| |||||||||| ||| ||||||||| ||||||||    
T  23718001 gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 24105673 - 24105754
Alignment:
Q  78 gacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtg 159  Q
    ||||||||||||| | |||||||||||| ||  ||||||||||| ||| |||||||||| ||| ||||||||| ||||||||    
T  24105673 gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 32199192 - 32199152
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  32199192 ttaataatttgataaaatcacataattaagtataattatat 32199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 15972835 - 15972930
Alignment:
Q  65 gacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||||| | |||||||| | |||||| ||||| | ||||||||||||| ||||| ||| |||| ||| |||||| |  |||||||||    
T  15972835 gacacagacaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgt 15972930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 30404934 - 30404865
Alignment:
Q  78 gacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||||| | |||||| ||||| |  |||||||||||| |||||||||||||| ||| ||||||    
T  30404934 gacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 34691856 - 34691807
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  34691856 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 34714268 - 34714219
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  34714268 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 30335362 - 30335474
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||||| ||   |||||| |||||||| | |  ||| ||||| | | ||||||||||| ||||| |||||||||||| ||||||    
T  30335362 tatgaagcacggatacggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatta 30335461  T
Q  148 tatatgtcggtgt 160  Q
     | ||||||||||    
T  30335462 caaatgtcggtgt 30335474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 30527647 - 30527599
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggt 158  Q
    |||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  30527647 ttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 31808068 - 31808136
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||||||||| ||  ||||||||| | |||||||||||||| ||| ||||||||| |||| ||||||    
T  31808068 tgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttg 31808136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 18420485 - 18420414
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgaca 181  Q
    ||||||||||| |||||||||||||| | |  |||||||  |||||||||||| || |||||||||||||||    
T  18420485 taataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgaca 18420414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 40361807 - 40361756
Alignment:
Q  109 attaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| ||| |||||    
T  40361807 attaataatttgaaaaaattacataatttagtgtaattatatctgttggtgt 40361756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 2423881 - 2423943
Alignment:
Q  115 aatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggaca 176  Q
    ||||||| ||||||| ||||||||||||||||||||  ||| |||| || |||||||||||||    
T  2423881 aatttgagaaaatcatataatttagtataattatatgagtcagtgtcgtatcgatgtcggaca 2423943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 5367188 - 5367249
Alignment:
Q  98 acaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||| | |||||||||||  ||||||||||||| ||| ||||||||| |||||||||    
T  5367188 acaccgacgc-actaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgt 5367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 2331774 - 2331827
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||||| |||||||| |  || ||||||||||||||| ||||||||||||||    
T  2331774 gacacggacattgacacgcaaacaccattaataatttgagaaaatcacataatt 2331827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 34337289 - 34337200
Alignment:
Q  49 atgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataattta 138  Q
    ||||| |||||||| |||||| || |||  | | |||||||| |||||||| ||||| |  || ||||||||| ||||||||||||||||    
T  34337289 atgaatcacggatacggacacggataccgtatacgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataattta 34337200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 44860328 - 44860377
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||| ||||||| ||| ||||||||| |||||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgt 44860377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 36281692 - 36281732
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatat 150  Q
    |||||||||||| |||||||||||||||||| |||| ||||    
T  36281692 ttaataatttgagaaaatcacataatttagtgtaatcatat 36281732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 36409713 - 36409641
Alignment:
Q  76 cagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattat 148  Q
    |||||| |||||||||| | |||  ||||| ||  | ||||||||| |||||||||||||||||| |||||||    
T  36409713 cagacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 39279682 - 39279734
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||||| ||| ||||||| |||||| ||| ||||||||| |||||||||||    
T  39279682 ttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttg 39279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 9629346 - 9629440
Alignment:
Q  66 acacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||  |||| ||||||||||||||||| ||||| ||   |||||||||| |||||||||||||| | | ||||||||| |||||||||    
T  9629346 acacagacactggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 7938061 - 7938173
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||||| |||||| |||| |||| ||| | |||||| ||||| |   ||||||||||| ||||||| |||||||||| ||||||    
T  7938061 tatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 7938160  T
Q  148 tatatgtcggtgt 160  Q
    ||  |||||||||    
T  7938161 taagtgtcggtgt 7938173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 5732607 - 5732512
Alignment:
Q  65 gacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| |||||  |||| |||| ||| | |||||| ||||| || |||||||||||| ||||||||||| |||||| ||||||||| |||||||||    
T  5732607 gacacggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgt 5732512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 5000722 - 5000628
Alignment:
Q  66 acacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||| |||||| ||||||||||||||| ||||||  |||| ||  |||||||| || |||||||||| ||| ||||||||| |||||||| ||||    
T  5000722 acacggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgt 5000628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 32299220 - 32299334
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||  |||||||||||||||||| ||||  ||| ||||||||| || |   ||||||||||| |||||||||||||| | | || |||    
T  32299220 tatgaagcacggatacagacacagacaccagacataacacaaatactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtta 32299319  T
Q  148 tatatgtcggtgttg 162  Q
    ||  |||||||||||    
T  32299320 tacgtgtcggtgttg 32299334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 7086803 - 7086852
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 9658852 - 9658937
Alignment:
Q  76 cagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgtt 161  Q
    |||||| |||||||| | |||||| ||||| ||  ||||||||| | |||||||||||||| ||| ||||||||| ||||||||||    
T  9658852 cagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgtt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 17341761 - 17341677
Alignment:
Q  64 ggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattata 149  Q
    ||||||||||||| | || |||||||  | |||||| ||||| || ||||||||||||||||||||||||||| ||| ||||||||    
T  17341761 ggacacagacacctg-cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 26178732 - 26178683
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 9027123 - 9027235
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||| |||| |||||| ||| || |||| |||||||| | |||||| ||||| ||  ||||||||||| | ||||||||||||  || ||||||    
T  9027123 tatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatta 9027222  T
Q  148 tatatgtcggtgt 160  Q
    ||| |||||||||    
T  9027223 tatgtgtcggtgt 9027235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 8777087 - 8776988
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| |||||| |||| | |||| |||||||| | |||||| ||||| | | ||||||||||| ||||||||| |||| ||| ||||||    
T  8777087 tatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 34447449 - 34447374
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatt 146  Q
    |||||||||||| |||| || | |||||| || || || |||||||||||||||||||| |||||||||| |||||    
T  34447449 gacaccagacataacacagacaatgacacgccaacaccgttaataatttgataaaatcatataatttagtgtaatt 34447374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 4040422 - 4040520
Alignment:
Q  59 gatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcgg 157  Q
    |||||| ||||| ||| |||| | |||||||| | | | |||||||| ||| ||||||||| | |||||| ||| ||| ||||||||||||||||||||    
T  4040422 gatatgtacacaaacatcagatacgacacggacacttaaacaccgacaccactaataatttaagaaaatcgcattattcagtataattatatatgtcgg 4040520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 10889088 - 10888986
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||   ||||| |||| || |||||||||||| |  ||||||  ||| ||  |||||||||||||||||||||||||||||| | ||||    
T  10889088 tatgaagcacggatgcagacacggacatcaaacatgacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgatta 10888989  T
Q  148 tat 150  Q
    |||    
T  10888988 tat 10888986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 15443703 - 15443765
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcg 172  Q
    ||||||||||| ||||| |||||||| | ||||||||||||||| |||||||| |||||||||    
T  15443703 taataatttgagaaaataacataattcaatataattatatatgttggtgttgtgtcgatgtcg 15443765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 7265644 - 7265595
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 7977937 - 7977832
Alignment:
Q  55 cacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgt 154  Q
    ||||||||||||||| |||||  |||| |||| ||||| |||||| ||||| |   ||||||||||| ||||| |||||||| ||| |||||| |  |||    
T  7977937 cacggatatggacacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 7977838  T
Q  155 cggtgt 160  Q
    ||||||    
T  7977837 cggtgt 7977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 9025545 - 9025496
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 9025496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 9195805 - 9195756
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgt 9195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 12686507 - 12686423
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacata 133  Q
    ||||||||||||||||||||||  |||||||||| ||||| || ||||| |||||||| |   ||||||||| | |||||||||||    
T  12686507 tatgaaacacggatatggacacgaacaccagacacgacac-gacattgatacaccgacactgctaataatttaagaaaatcacata 12686423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 16766642 - 16766771
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| |||||| |||||| |||| |||| ||| | |||||| ||||| |   ||||||||||| |||||||||||||| ||| ||||||    
T  16766642 tatgaagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T
Q  148 tatatgtcggtgttgt-tcgatgtcggaca 176  Q
     |  ||||||||| || ||| |||||||||    
T  16766742 caagtgtcggtgtcgtgtcggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 34595102 - 34595191
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| |||| |||||||| | |||||| ||||| | | ||||||||||| |||||||||||||| ||| |||||| |  |||||||||    
T  34595102 gacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 34595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 5970160 - 5970085
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacacat 184  Q
    |||||||||||| |||||||||||||| ||| |||||| | |||| ||||| || ||| ||||||||| |||||||    
T  5970160 ttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacat 5970085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 25096422 - 25096477
Alignment:
Q  102 cgacgccattaataatttgataaaatcacataatttagtataattatatatgtcgg 157  Q
    |||| ||| ||||||||||| ||||||||||||| |||| |||||| |||||||||    
T  25096422 cgacaccactaataatttgagaaaatcacataatctagtgtaattacatatgtcgg 25096477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 4877922 - 4878000
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaa-tcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||| |||||||||||| |   ||||||||||| |||| |||||||||| |||||||||| |  |||||||||    
T  4877922 gacacggatagtgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgt 4878000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 19040343 - 19040409
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| ||||| ||  ||||||||||| |||||||||||||| ||| ||||||||| |||| ||||    
T  19040343 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgt 19040409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 30866235 - 30866149
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcgg 157  Q
    |||||| |||||||||| || |  |||||||| || ||  ||||||||||| |||||||||||||| | | ||||||||| ||||||    
T  30866235 gacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 853950 - 853885
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||| |||| |||||||||  |||||| ||||| | | ||||||||||| ||||||||||||||    
T  853950 gacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataatt 853885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 7151420 - 7151469
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| ||| |||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgt 7151469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 8365610 - 8365545
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    ||||||||||| |||||||| | |||||| ||||| | | ||||||||||| || |||||||||||    
T  8365610 gacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataatt 8365545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 8805623 - 8805586
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattat 148  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 9107484 - 9107355
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||  ||||| |||||| |||| |||||||| | | |||| ||||| |   ||||||||||| ||||||||| |||| ||| ||||||    
T  9107484 tatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatta 9107385  T
Q  148 tatatgtcggtgttgt-tcgatgtcggaca 176  Q
     |  ||||||||| || ||| |||||||||    
T  9107384 caagtgtcggtgtcgtgtcggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 9617442 - 9617491
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| | | ||||||||| |||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 10842540 - 10842585
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    ||||||||||| |||||||||||||||||| |||| |||| |||||    
T  10842540 taataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11784267 - 11784218
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||| | | ||| |||||||||||||||||||    
T  11784267 taataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgt 11784218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 20371189 - 20371112
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||| |||||||| ||||| ||  ||||||||||| |||||||||||| | | | | ||||||| |||||||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgt 20371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 24115898 - 24115849
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| | |||||||||||||| | ||||||||||||||| |||||    
T  24115898 taataatttcaaaaaatcacataattcaatataattatatatgttggtgt 24115849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 25038123 - 25038070
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgttgt 163  Q
    |||||||||||| ||||| |||||||||||| |||||| | |||||||| ||||    
T  25038123 ttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgt 25038070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 33001340 - 33001291
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| | | ||||||||| |||||||||    
T  33001340 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgt 33001291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 426628 - 426540
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||| || |||||  ||||| || ||| |||| |||||||| | |||||| ||||| |  |||||||||||| ||||||||||||||    
T  426628 tatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataatt 426540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 5462693 - 5462737
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgt 154  Q
    |||||||||||| |||||||||||||| | | |||||||||||||    
T  5462693 ttaataatttgagaaaatcacataattcattgtaattatatatgt 5462737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 10294052 - 10294164
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||||||| ||||||  ||||| |||| |||||||||| |||||  ||||  ||  ||||||||||| | |||| |||| || | | ||||||    
T  10294052 tatgaagcacggatacggacacgaacaccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaatta 10294151  T
Q  148 tatatgtcggtgt 160  Q
    ||| |||||||||    
T  10294152 tatgtgtcggtgt 10294164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 17841640 - 17841604
Alignment:
Q  111 taataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  17841640 taataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 21395421 - 21395310
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||  |||||||||||| || |||||| ||| |  ||||| || || ||  ||||||||||| ||||| |||||||||||| ||||||    
T  21395421 tatgaagcacggatacagacacagacaccggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaatta 21395323  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  21395322 caagtgtcggtgt 21395310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 22423891 - 22423814
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||| |||||| | ||| | | ||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  22423891 gacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgt 22423814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 11685947 - 11686018
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgttcgatgtcggacatgacac 182  Q
    ||||||||||| ||| || ||||||||||| ||||||||| ||||||||| ||||| ||||||||| |||||    
T  11685947 taataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgttcggtgtcggacacgacac 11686018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 12927602 - 12927711
Alignment:
Q  51 gaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||| |||||  ||||||||||  ||||||| || || |  |||||||||||  |  ||||||||||| ||||||| |||||||||| |||||||||    
T  12927602 gaaacacagatatatacacagacactggacatgatacagacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatat 12927701  T
Q  151 atgtcggtgt 160  Q
    ||||| ||||    
T  12927702 atgtcagtgt 12927711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 7175098 - 7175026
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    |||||||| | ||||||| |||| || |||||||||||| ||||||||||||||| | |||||||||| ||||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatcacataatttggcataattatatgtgtc 7175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 26609342 - 26609390
Alignment:
Q  92 attgacacaccgacgccattaataatttgataaaatcacataatttagt 140  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  26609342 attgacacaccgacaccactaataatttgataaaatcacatgatttagt 26609390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 16203892 - 16203797
Alignment:
Q  65 gacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||  |||||||||||| | | |||  ||||| |   ||||||||||| |||||| ||||||||||| ||||||||| |||||||||    
T  16203892 gacacagacaccgaacatgacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgt 16203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 17123056 - 17123107
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    ||||||||||| |||||||||||||  |||| ||||||||||||||||||||    
T  17123056 taataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttg 17123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 23220991 - 23221042
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||||||||||||||||||||||||||| | || |||| |||||||||||    
T  23220991 taataatttgataaaatcacataatttagtgttatcatatgtgtcggtgttg 23221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 6770483 - 6770576
Alignment:
Q  43 caacttatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||| |||||| |||||||| ||| || ||||||  |||||||||||| | |||||||| ||| | | ||||||||| | ||||||||||||||    
T  6770483 caacctatgaagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataatt 6770576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 36838551 - 36838600
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtcggtgt 36838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 28588744 - 28588676
Alignment:
Q  92 attgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||| ||||| ||  ||||||||||| |||||||||||||| ||| ||||||||  |||||||||    
T  28588744 attgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 14873527 - 14873574
Alignment:
Q  113 ataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgt 14873574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 15382422 - 15382536
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttg--ataaaatcacataatttagtataat 145  Q
    |||||| |||||||| |||||| |||||| |||| |||||||| | |||||| ||||| |   ||||||||||  | ||||||| |||||| ||||||||    
T  15382422 tatgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataat 15382521  T
Q  146 tatatatgtcggtgt 160  Q
    || |  |||||||||    
T  15382522 tacaagtgtcggtgt 15382536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 23012459 - 23012408
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    ||||||||||| ||||||| |||||||| | ||||||||| |||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttg 23012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 35017045 - 35017084
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattatat 35017084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 5468029 - 5467991
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattata 149  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 21541984 - 21542110
Alignment:
Q  57 cggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    |||||| |||||| ||||||||||| ||||| || |||||||  ||||| | | ||||||||| | || || |||||||| ||| |||||| |  |||||    
T  21541984 cggatacggacacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcg 21542083  T
Q  157 gtgttgt-tcgatgtcggacatgacac 182  Q
    |||| || ||| ||||||||| |||||    
T  21542084 gtgtcgtgtcggtgtcggacacgacac 21542110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 40131629 - 40131695
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggaca 176  Q
    ||||||||||| |||||||||||||| ||| |||||||| || ||||||| || |||||||| ||||    
T  40131629 taataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagaca 40131695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 3966511 - 3966560
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||||||| |||| ||| ||||||||| |||||||||    
T  3966511 taataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 3966560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 6471940 - 6471891
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| ||| |||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgt 6471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 27144454 - 27144515
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    |||||| ||||| ||  |||||||||||  ||||||||||||||||| ||||||||| ||||    
T  27144454 tgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 30502439 - 30502390
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||| ||||| ||| ||||||||| |||||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 30502390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 30542782 - 30542733
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||| ||||| ||| ||||||||| |||||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 30542733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 12641681 - 12641717
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataatt 146  Q
    |||||||||| | ||||||||||||||||||||||||    
T  12641681 ttaataatttaaaaaaatcacataatttagtataatt 12641717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 14674277 - 14674313
Alignment:
Q  111 taataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 17593773 - 17593725
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtg 159  Q
    ||||||||||| |||||||| ||||| ||| ||||||||||||| ||||    
T  17593773 taataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 21191154 - 21191058
Alignment:
Q  64 ggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| |||||| |||| |||||||| | |||||  ||||| |   ||||||||||| |||||||||||||| ||| |||||| |  |||||||||    
T  21191154 ggacactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 21191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 22299559 - 22299496
Alignment:
Q  83 gacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||||||||||||||| |   ||||||||| | |||||||||| ||| ||||||||||    
T  22299559 gacacggatattgacacaccgacacagctaataattt-aaaaaatcacatgattcagtataatta 22299496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 30098333 - 30098381
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggt 158  Q
    |||||||||||| |||||||||||||| | | |||||||| ||||||||    
T  30098333 ttaataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 36642875 - 36642764
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| ||||| ||||||| |||| |||||||| | |||||| ||||| |  |||||||||||| ||| | ||||| |||||| ||| ||    
T  36642875 tatgaagcatggatacggaca-agacaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaata 36642777  T
Q  148 tatatgtcggtgt 160  Q
    ||  |||||||||    
T  36642776 taagtgtcggtgt 36642764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 90834 - 90896
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    ||||||||| || ||||||||||||||| ||||||| |||||| ||| |||||||||||||||    
T  90834 tgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 4786406 - 4786340
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| ||||| ||||||||||||| | |||||||||||||| ||| ||||||||| |||||||||    
T  4786406 tgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 7253516 - 7253614
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatt 146  Q
    ||||||||||||||||| ||| ||| |   || | || || ||||| |||||||||||||| |||||||| ||| ||||||| ||||||||||||||||    
T  7253516 tatgaaacacggatatgtacatagatattggaaacgatacagatatcgacacaccgacgcctttaataatatgagaaaatcatataatttagtataatt 7253614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 11927138 - 11927088
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  11927138 ttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgt 11927088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 22651929 - 22652055
Alignment:
Q  56 acggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtc 155  Q
    ||||||| |||||| |||||| |||| |||||||| | |||||| ||||| |   ||||||||||| |||||||||||||| | |||||||| |  ||||    
T  22651929 acggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtc 22652028  T
Q  156 ggtgttgt-tcgatgtcggacatgaca 181  Q
    ||||| || ||| ||||||||| ||||    
T  22652029 ggtgtcgtgtcggtgtcggacacgaca 22652055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 11944633 - 11944722
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||| ||| |||||||||  | |||| ||||| |  ||||||||||||||||||||||||| | ||| ||||||||| |||||||||    
T  11944633 gacaccaaacacgacacggatgctaacacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgt 11944722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 14134707 - 14134756
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 3677759 - 3677845
Alignment:
Q  76 cagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    |||||| |||||||||| ||||||| |||| | ||||||||||| | ||||||||||||||   | ||||||||| | |||||||||    
T  3677759 cagacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattctatgtaattatatgtatcggtgttg 3677845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 15816197 - 15816131
Alignment:
Q  94 tgacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||| ||||| | | ||||||||||| |||||||||||||||||| ||||||||  |||||||||    
T  15816197 tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgt 15816131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 33405436 - 33405386
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    |||||||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  33405436 ttaataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgt 33405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 7658461 - 7658522
Alignment:
Q  101 ccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgttg 162  Q
    ||||| ||| ||||||||||| ||||| |||||||| ||| ||||||||| |||||||||||    
T  7658461 ccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 13844647 - 13844598
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 29510418 - 29510289
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| ||||||||  ||||  |||||| |||| |||||||| | |||||| ||||| |   ||||||||||| ||||||||| |||| ||||||||||    
T  29510418 tatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatta 29510319  T
Q  148 tatatgtcggtgttgt-tcgatgtcggaca 176  Q
     |  ||||||||| || ||| |||||||||    
T  29510318 caagtgtcggtgtagtgtcggtgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 2572170 - 2572058
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| |||||| |||||  |||| ||||||||||  |||||  |||| |   ||||||||||| |||||||||||||||||| ||||||    
T  2572170 tatgaagcatggatacggacacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaatta 2572071  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  2572070 caagtgtcggtgt 2572058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 11803203 - 11803319
Alignment:
Q  47 ttatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatt 146  Q
    |||||||||||| |||  |||||  |||||| ||| |||||| | | ||| |||| ||| |  |||||||||| | |||||||||||||| ||| |||||    
T  11803203 ttatgaaacacgaatacagacacgaacaccaaacacgacacgaacactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaatt 11803302  T
Q  147 atatatgtcggtgttgt 163  Q
    |||| ||| ||||||||    
T  11803303 atatgtgttggtgttgt 11803319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 39954330 - 39954282
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtg 159  Q
    ||||||||||| |||||||||||||||||| ||||||||| || |||||    
T  39954330 taataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 14731720 - 14731759
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatat 150  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatat 14731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 24413674 - 24413603
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataattt 119  Q
    |||||| |||||||| |||||| ||||||||||| |||||||| | ||||| || ||| || ||||||||||    
T  24413674 tatgaagcacggatacggacacggacaccagacacgacacggacactgacatactgacaccgttaataattt 24413603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 34222955 - 34223002
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggt 158  Q
    ||||||||| |||||||||||||||| ||| ||||||||| |||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtgtcggt 34223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 18068039 - 18067989
Alignment:
Q  49 atgaaacacggatatggacacagacaccagacatgacacggatattgacac 99  Q
    ||||| |||||||||||||||| |||| ||||||||||| |||| ||||||    
T  18068039 atgaagcacggatatggacacaaacacaagacatgacacagatagtgacac 18067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 22493504 - 22493554
Alignment:
Q  113 ataatttgataaaatcacataatttagtataattatatatgtcggtgttgt 163  Q
    ||||||| | |||||||||||||| ||| |||| |||||||||||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgt 22493554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 25172749 - 25172683
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggaca 176  Q
    ||||||||||||||||| ||||| |||| | ||||||||| ||||||||| || || ||||||||||    
T  25172749 taataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggaca 25172683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 8342980 - 8343029
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 8343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 12936543 - 12936510
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtata 143  Q
    ||||||||||||||||||||||||||||| ||||    
T  12936543 ttaataatttgataaaatcacataatttattata 12936510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12985400 - 12985449
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||| | | |||| ||||||||||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgt 12985449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 20873077 - 20873126
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 20873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 34897093 - 34897138
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcg 156  Q
    ||||||||||| |||||||||||||| ||| ||||||||| |||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  111 taataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 13018288 - 13018328
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatat 150  Q
    |||||||||||| |||||||||||||||||| |||| ||||    
T  13018288 ttaataatttgacaaaatcacataatttagtgtaatgatat 13018328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 27101504 - 27101552
Alignment:
Q  92 attgacacaccgacgccattaataatttgataaaatcacataatttagt 140  Q
    |||||||| ||||| ||  ||||||||||| ||||||||||||||||||    
T  27101504 attgacacgccgacaccgctaataatttgaaaaaatcacataatttagt 27101552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 31236628 - 31236580
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtg 159  Q
    ||||||||||| |||||||||||||| | | ||||||||| ||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 20990 - 21098
Alignment:
Q  50 tgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattata 149  Q
    |||||||| |||| | |||| ||||||||||| |||||||| | |||||  | ||| |  |||||||||||| |||||||||||| |  |||||||||||    
T  20990 tgaaacacagatacgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattata 21089  T
Q  150 tatgtcggt 158  Q
    | |||||||    
T  21090 tgtgtcggt 21098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 9808 - 9749
Alignment:
Q  101 ccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| ||||||||||| |||||||| ||||| ||| ||||||||| |||||||||    
T  9808 ccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 9749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 1636 - 1701
Alignment:
Q  95 gacacaccgacgccattaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||| ||||| || |||||||||||| ||||||| ||||||| |||||||||||  |||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgt 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 7540 - 7580
Alignment:
Q  123 aaaatcacataatttagtataattatatatgtcggtgttgt 163  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  7540 aaaatcacataatttagtataattataaatgtcgatgttgt 7580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 8743 - 8855
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| |||||| |||||| |||| |||||||| | |||||| ||||| |   ||||||||||| ||||||| || ||||||| ||||||    
T  8743 tatgaagcatggatacggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaatta 8842  T
Q  148 tatatgtcggtgt 160  Q
     |  |||||||||    
T  8843 caagtgtcggtgt 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 53189 - 53260
Alignment:
Q  112 aataatttgataaaatcacataatttagtataattatatatgtcggtgttgt-tcgatgtcggacatgacac 182  Q
    |||||||||| |||||||||||||| ||| ||||||||  ||||||||  || ||| |||||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacac 53260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 68294 - 68255
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattata 149  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  68294 ttaataatttgagaaaatcatataatttagtataattata 68255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 130427 - 130526
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| || ||||| |||||| |||||| |||| |||||||| | |||||  ||||| |  |||||| ||||| |||||||||||||| ||| ||||||    
T  130427 tatgaagcatggatacggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaatta 130526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 25820 - 25770
Alignment:
Q  110 ttaataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||| || |||||||||||||||||| ||||||||  |||||||||    
T  25820 ttaataattagagaaaatcacataatttagtgtaattataagtgtcggtgt 25770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 13368 - 13433
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||| || |||||||||| | |||||| ||||| | | ||||||||||| ||||||||||||||    
T  13368 gacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataatt 13433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 21959 - 21894
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatt 136  Q
    |||||| || |||||||||| | |||||| ||||| | | ||||||||||| ||||||||||||||    
T  21959 gacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataatt 21894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 135363 - 135314
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| ||||||||||||||  || ||||||||| |||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgt 135314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 17800 - 17751
Alignment:
Q  111 taataatttgataaaatcacataatttagtataattatatatgtcggtgt 160  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 17751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 241562 - 241639
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataattat 148  Q
    |||||| |||| |||||||| | |||||| ||||| |   ||||||||||  |||||||||||||||||| |||||||    
T  241562 gacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattat 241639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 7083 - 7047
Alignment:
Q  111 taataatttgataaaatcacataatttagtataatta 147  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  7083 taataatttgaaaaaattacataatttagtataatta 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 20140 - 20216
Alignment:
Q  71 gacaccagacatgacacggatattgacacaccgacgccattaataatttgataaaatcacataatttagtataatta 147  Q
    |||||| |||| |||||||| | |||||| ||||| |   ||||||||||| |||||||||||||| ||| ||||||    
T  20140 gacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 3968 - 3928
Alignment:
Q  48 tatgaaacacggatatggacacagacaccagacatgacacg 88  Q
    |||||| ||||||||||||||| ||||||||||| ||||||    
T  3968 tatgaagcacggatatggacacggacaccagacacgacacg 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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