View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21273_high_6 (Length: 217)
Name: NF21273_high_6
Description: NF21273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21273_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 46816521 - 46816315
Alignment:
| Q |
1 |
accagcttcaccaacttcatctcctctggcaccacaacaagacacaaatgttcctcttttgactccgccatcgccatcggtgtcaacaacgggaagtggc |
100 |
Q |
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| T |
46816521 |
accagcttcaccaacttcatctcctctggcaccacaacaagacacaaatgttcctcttttgactccgccatcgccatcggtgtcaacaacgggaagtggc |
46816422 |
T |
|
| Q |
101 |
cgctcatctctgactccatcatctgccattacatcttacaatgtctcacctactgttctattgattgcactgggatttgttgctctcaaatattactaga |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46816421 |
cgctcatctttgactccatcatctgccattacatcttacaatgtctcacctactgttctattgattgcactgggatttgttgctctcaaatattactaga |
46816322 |
T |
|
| Q |
201 |
ttctgtg |
207 |
Q |
| |
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||||||| |
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| T |
46816321 |
ttctgtg |
46816315 |
T |
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