View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21274_low_3 (Length: 282)

Name: NF21274_low_3
Description: NF21274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21274_low_3
NF21274_low_3
[»] chr6 (14 HSPs)
chr6 (18-184)||(34883464-34883636)
chr6 (210-278)||(17598554-17598622)
chr6 (205-278)||(31110793-31110864)
chr6 (210-278)||(31109432-31109500)
chr6 (232-278)||(11427640-11427686)
chr6 (200-278)||(15832567-15832645)
chr6 (209-279)||(31976247-31976317)
chr6 (201-278)||(23128159-23128236)
chr6 (210-278)||(29857827-29857895)
chr6 (207-278)||(6209497-6209568)
chr6 (209-275)||(22422053-22422119)
chr6 (232-278)||(32869700-32869746)
chr6 (206-279)||(12732478-12732551)
chr6 (207-275)||(30341395-30341463)
[»] chr3 (18 HSPs)
chr3 (204-279)||(11347953-11348028)
chr3 (208-278)||(54868927-54868997)
chr3 (209-278)||(17470404-17470473)
chr3 (210-279)||(26141563-26141632)
chr3 (210-279)||(47531865-47531934)
chr3 (206-278)||(49607410-49607482)
chr3 (208-279)||(41189795-41189866)
chr3 (208-278)||(11095385-11095455)
chr3 (208-278)||(27714923-27714993)
chr3 (210-279)||(51419391-51419460)
chr3 (214-278)||(52629304-52629368)
chr3 (210-278)||(53982011-53982079)
chr3 (208-275)||(35093583-35093650)
chr3 (207-278)||(36707456-36707527)
chr3 (209-279)||(8956761-8956831)
chr3 (222-268)||(32605956-32606002)
chr3 (208-278)||(33118883-33118953)
chr3 (210-278)||(33644200-33644268)
[»] chr5 (19 HSPs)
chr5 (209-279)||(6679697-6679767)
chr5 (210-279)||(28177775-28177844)
chr5 (210-278)||(35943924-35943992)
chr5 (208-278)||(15409642-15409712)
chr5 (209-278)||(2740273-2740342)
chr5 (206-278)||(13811648-13811720)
chr5 (210-278)||(35785199-35785267)
chr5 (210-278)||(14831814-14831882)
chr5 (206-278)||(18520916-18520988)
chr5 (210-278)||(40145407-40145475)
chr5 (209-275)||(2252203-2252269)
chr5 (210-279)||(26720516-26720585)
chr5 (210-279)||(26990265-26990334)
chr5 (233-282)||(39557545-39557594)
chr5 (209-278)||(41470448-41470517)
chr5 (233-278)||(42414334-42414379)
chr5 (207-275)||(3921300-3921368)
chr5 (206-278)||(31008984-31009056)
chr5 (208-276)||(36732976-36733044)
[»] chr2 (24 HSPs)
chr2 (205-279)||(42257188-42257262)
chr2 (204-278)||(38273174-38273248)
chr2 (210-279)||(40613933-40614002)
chr2 (209-278)||(2533123-2533191)
chr2 (210-278)||(4060685-4060753)
chr2 (210-278)||(40701478-40701546)
chr2 (215-278)||(19930852-19930915)
chr2 (209-280)||(33436210-33436281)
chr2 (208-278)||(9058478-9058548)
chr2 (208-278)||(10249414-10249484)
chr2 (209-278)||(5574520-5574589)
chr2 (209-278)||(32505680-32505749)
chr2 (205-278)||(33436132-33436205)
chr2 (206-275)||(45097770-45097839)
chr2 (210-278)||(13438343-13438411)
chr2 (210-278)||(27864704-27864772)
chr2 (210-278)||(28381687-28381755)
chr2 (215-278)||(28863460-28863523)
chr2 (207-278)||(38882846-38882916)
chr2 (209-278)||(7465767-7465836)
chr2 (210-275)||(17820039-17820104)
chr2 (205-278)||(20700810-20700883)
chr2 (210-278)||(17473020-17473088)
chr2 (215-275)||(41575142-41575202)
[»] scaffold0321 (1 HSPs)
scaffold0321 (201-278)||(10141-10218)
[»] chr1 (21 HSPs)
chr1 (209-279)||(37926469-37926539)
chr1 (208-278)||(49811559-49811629)
chr1 (209-278)||(51898715-51898784)
chr1 (210-278)||(27564767-27564835)
chr1 (207-279)||(32813244-32813316)
chr1 (205-279)||(37649193-37649267)
chr1 (208-278)||(38632353-38632423)
chr1 (206-278)||(8346420-8346492)
chr1 (206-278)||(38595150-38595222)
chr1 (210-278)||(48716314-48716382)
chr1 (207-278)||(2581912-2581983)
chr1 (215-278)||(44548408-44548471)
chr1 (210-275)||(41608528-41608593)
chr1 (210-278)||(43132-43200)
chr1 (210-278)||(9474908-9474976)
chr1 (211-275)||(44453980-44454044)
chr1 (232-278)||(3000341-3000387)
chr1 (232-278)||(11152410-11152456)
chr1 (206-275)||(5959035-5959104)
chr1 (215-276)||(26274437-26274498)
chr1 (207-279)||(23597122-23597194)
[»] chr8 (19 HSPs)
chr8 (209-278)||(37038478-37038547)
chr8 (206-278)||(5957826-5957898)
chr8 (210-278)||(504153-504221)
chr8 (210-278)||(15048214-15048281)
chr8 (210-278)||(15197333-15197401)
chr8 (212-278)||(10621119-10621185)
chr8 (232-278)||(40423975-40424021)
chr8 (210-278)||(23122629-23122697)
chr8 (209-265)||(25838196-25838252)
chr8 (206-273)||(24307625-24307692)
chr8 (232-278)||(14547944-14547990)
chr8 (209-275)||(32032724-32032789)
chr8 (206-275)||(16056436-16056505)
chr8 (206-275)||(16383373-16383442)
chr8 (208-273)||(24307830-24307895)
chr8 (210-275)||(30479509-30479574)
chr8 (210-279)||(43414612-43414681)
chr8 (210-278)||(1179972-1180040)
chr8 (210-278)||(12831047-12831115)
[»] chr4 (18 HSPs)
chr4 (210-279)||(50526202-50526271)
chr4 (210-278)||(41236347-41236415)
chr4 (206-278)||(50052460-50052532)
chr4 (207-278)||(29239883-29239954)
chr4 (208-275)||(29547994-29548061)
chr4 (210-277)||(40574779-40574846)
chr4 (208-275)||(55475189-55475256)
chr4 (201-275)||(19670751-19670825)
chr4 (209-275)||(44536781-44536846)
chr4 (209-275)||(47986207-47986273)
chr4 (206-278)||(480479-480551)
chr4 (206-278)||(42044399-42044471)
chr4 (210-276)||(3481654-3481720)
chr4 (210-276)||(31910192-31910258)
chr4 (208-278)||(48183081-48183151)
chr4 (210-275)||(6034044-6034109)
chr4 (210-275)||(8343198-8343263)
chr4 (210-278)||(11511494-11511562)
[»] chr7 (22 HSPs)
chr7 (210-278)||(19329842-19329910)
chr7 (215-278)||(3784000-3784063)
chr7 (208-278)||(19436219-19436289)
chr7 (209-278)||(36361945-36362014)
chr7 (210-278)||(21234401-21234469)
chr7 (209-279)||(46033832-46033902)
chr7 (209-278)||(3434561-3434630)
chr7 (206-275)||(7727902-7727971)
chr7 (206-279)||(18207176-18207249)
chr7 (210-275)||(32564461-32564526)
chr7 (209-278)||(36362025-36362094)
chr7 (210-279)||(46374833-46374902)
chr7 (210-278)||(35137533-35137601)
chr7 (211-279)||(35522877-35522945)
chr7 (208-275)||(38044195-38044262)
chr7 (207-278)||(40957704-40957775)
chr7 (208-278)||(7389387-7389457)
chr7 (205-271)||(40846152-40846218)
chr7 (206-271)||(35468894-35468959)
chr7 (210-275)||(41423682-41423747)
chr7 (210-278)||(4999546-4999614)
chr7 (206-278)||(45223038-45223110)
[»] scaffold1268 (1 HSPs)
scaffold1268 (210-278)||(961-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (210-278)||(961-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (210-278)||(4029-4097)


Alignment Details
Target: chr6 (Bit Score: 134; Significance: 8e-70; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 34883464 - 34883636
Alignment:
Q  18 ttatcctctttccatctcattgttgtttaacttcc------atacatatattgctattttcacccctcacttttcctaatcattaatagagtaacacaaa 111  Q
    |||||||||||||||||||||||||||||| ||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34883464 ttatcctctttccatctcattgttgtttaatttccaattccatacatatattgctattttcacccctcacttttcctaatcattaatagagtaacacaaa 34883563  T
Q  112 tagcatccgttttaacgtattctttctaaaatttactttttcattagataaaatatatatgggtcttaccact 184  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  34883564 tagcatccattttaacgtattctttctcaaatttactttttcattagataaaacatatatgggtcttaccact 34883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 17598554 - 17598622
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgt 17598622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 31110864 - 31110793
Alignment:
Q  205 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||||||||||| ||||||||  ||||||||||||||| | |||||||  | ||||||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgt 31110793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| ||||| ||||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 11427640 - 11427686
Alignment:
Q  232 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||    
T  11427640 ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgt 11427686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 15832567 - 15832645
Alignment:
Q  200 atttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||||| |||||| |||||||  |||||||| ||||| ||| |||||||  ||||||||||| ||||||||    
T  15832567 attttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgt 15832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 31976247 - 31976317
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||| |||  |||||||||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtg 31976317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 23128236 - 23128159
Alignment:
Q  201 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||| | |||||| |||||||  |||| |||  |||||||| |||||||  ||||||||||||||||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgt 23128159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 29857827 - 29857895
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgt 29857895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 6209568 - 6209497
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||| |||||||   |||||||||||||||   ||||||| ||||||||||||||| |||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgt 6209497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||| |||||| ||||||||  ||||||||||||| |||| |||||| ||| |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 32869700 - 32869746
Alignment:
Q  232 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  32869700 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 32869746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 12732478 - 12732551
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||| |||||| ||||||||| ||| ||||||||| |    ||||||  |||||||||||||||||||||    
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtg 12732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 30341463 - 30341395
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  |||||||||||||||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 30341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 11348028 - 11347953
Alignment:
Q  204 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtg 11347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 54868997 - 54868927
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgt 54868927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 17470404 - 17470473
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||  |||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgt 17470473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 26141632 - 26141563
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||  |||||||||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtg 26141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 47531865 - 47531934
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  |||| |||||||||| ||||| |||| ||||||| |||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtg 47531934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 49607410 - 49607482
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 49607482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 41189866 - 41189795
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||  |||| |||||| |||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtg 41189795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 11095455 - 11095385
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 27714993 - 27714923
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||  ||||||||| |||||| | |||||||  ||||||||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgt 27714923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 51419460 - 51419391
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  |||| || ||||||||| ||| |||  |||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtg 51419391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 52629304 - 52629368
Alignment:
Q  214 tatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 52629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 53982011 - 53982079
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 53982079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 35093583 - 35093650
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||| |||| |||||||  |||||||| ||||||| | |||||||| ||| |||||||||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgaca 35093650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 36707527 - 36707456
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||| ||||| |   ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 8956761 - 8956831
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||| |||||| ||||||||  ||| ||||||||||||| |||||||  |||| |||||| |||||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtg 8956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 32606002 - 32605956
Alignment:
Q  222 atagacatttttaggtggcaatacatcttttgacattcacacaaaaa 268  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||    
T  32606002 atagacaatcttaggtggcaatacattctttgacattcacacaaaaa 32605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 33118953 - 33118883
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||| ||||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgt 33118883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 33644200 - 33644268
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   || |||||||||||| | |||||||  ||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgt 33644268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 6679697 - 6679767
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||  |||||||||||||||||||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtg 6679767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 28177775 - 28177844
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtg 28177844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 35943992 - 35943924
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgt 35943924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 15409712 - 15409642
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||| ||||||||  ||||||| ||||||||  |||||||  ||||||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgt 15409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 2740273 - 2740342
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 2740342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 13811648 - 13811720
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| | |||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgt 13811720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 35785199 - 35785267
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgt 35785267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 14831814 - 14831882
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgt 14831882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 18520988 - 18520916
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| | |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 18520916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 40145407 - 40145475
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| | ||| |||| ||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgt 40145475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 2252269 - 2252203
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  ||||||  |||||||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 26720516 - 26720585
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtg 26720585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 26990265 - 26990334
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtg 26990334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 39557594 - 39557545
Alignment:
Q  233 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatc 282  Q
    ||||||| |||||| || || |||| ||||||||||||||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatc 39557545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 41470517 - 41470448
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| || ||| |||||||  |||||||||||||||||| ||| | ||||| | |||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgt 41470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 42414379 - 42414334
Alignment:
Q  233 taggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgt 42414334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 3921368 - 3921300
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  |||||||||||||||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 3921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 31008984 - 31009056
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||  ||  |||  ||||||||||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgt 31009056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 36733044 - 36732976
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacac 276  Q
    |||||| |||||| |||||||   |||||| |||||||| | |||||||  ||||||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacac 36732976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 42257188 - 42257262
Alignment:
Q  205 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtg 42257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 38273248 - 38273174
Alignment:
Q  204 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| | ||| |||  ||||||||||||||||||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgt 38273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 40614002 - 40613933
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtg 40613933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 2533123 - 2533191
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||  ||||||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgt 2533191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 4060685 - 4060753
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgt 4060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 40701478 - 40701546
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgt 40701546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 19930915 - 19930852
Alignment:
Q  215 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 19930852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 33436210 - 33436281
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtga 280  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| |||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtga 33436281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 9058478 - 9058548
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 9058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 10249484 - 10249414
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgt 10249414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 5574589 - 5574520
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgt 5574520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 32505749 - 32505680
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgt 32505680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 33436205 - 33436132
Alignment:
Q  205 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgt 33436132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 45097839 - 45097770
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||  ||||||  || ||||||||||||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgaca 45097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 13438343 - 13438411
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||| ||||||||| |||||||  ||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgt 13438411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 27864704 - 27864772
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||| ||||||||||| | |||||||| ||||||||||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgt 27864772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 28381755 - 28381687
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgt 28381687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 28863460 - 28863523
Alignment:
Q  215 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 28863523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 38882916 - 38882846
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||| |||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 7465836 - 7465767
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 7465767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 17820104 - 17820039
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||| |||||||  | |||||||||||||| |  ||||||  |||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 20700810 - 20700883
Alignment:
Q  205 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||| |||||| ||||||||  ||| ||||||||||| | ||||||    |||||||||||||||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgt 20700883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 17473020 - 17473088
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 17473088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 41575142 - 41575202
Alignment:
Q  215 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||| ||||||||  |||| ||| |||||| | |||||||||||||||||||| |||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgaca 41575202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 10218 - 10141
Alignment:
Q  201 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgt 10141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 37926539 - 37926469
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||  |||| ||||||||||||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtg 37926469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 49811629 - 49811559
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||| ||||||||  ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgt 49811559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 51898784 - 51898715
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 51898715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 27564835 - 27564767
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgt 27564767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 32813244 - 32813316
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||||||| ||||||||  ||||||||||||||| | ||| |||  |||||||||||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtg 32813316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 37649193 - 37649267
Alignment:
Q  205 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   |||||||  |||||||||||||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtg 37649267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 38632423 - 38632353
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   ||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgt 38632353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 8346492 - 8346420
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| |||| ||  |||||||||||||||| | |||||||  ||||||||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgt 8346420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 38595150 - 38595222
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| ||| |||  |||||||||||||||| | |||||||  ||||||||||||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 38595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 48716382 - 48716314
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgt 48716314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 2581912 - 2581983
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 2581983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 44548471 - 44548408
Alignment:
Q  215 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||||| |||||||||||||||| | ||||| |  ||||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgt 44548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 41608593 - 41608528
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||| ||||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 43132 - 43200
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| ||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgt 43200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 9474976 - 9474908
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 9474908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 44453980 - 44454044
Alignment:
Q  211 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||| |||||||  |||| |||||||||||||| |||| |  |||||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgaca 44454044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 3000341 - 3000387
Alignment:
Q  232 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  3000341 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 3000387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 11152456 - 11152410
Alignment:
Q  232 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||    
T  11152456 ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgt 11152410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 5959104 - 5959035
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||||| ||| |||   ||| ||||||||||| || ||||||  |||||||||||||||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgaca 5959035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 26274437 - 26274498
Alignment:
Q  215 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacac 276  Q
    |||||| |||||||   ||| ||||||||||||| |||||||| |||| |||||||||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacac 26274498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 23597194 - 23597122
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||| |||||| ||||||||  |||||||||||||||   ||||| |  |||| ||||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 37038478 - 37038547
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 37038547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 5957826 - 5957898
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| ||| |||||| ||||||||| ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 5957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 504221 - 504153
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgt 504153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 15048281 - 15048214
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgt 15048214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 15197333 - 15197401
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 15197401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 10621185 - 10621119
Alignment:
Q  212 gttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgt 10621119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 40424021 - 40423975
Alignment:
Q  232 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  40424021 ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 40423975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 23122697 - 23122629
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||| ||||||||||| |||||||||  ||||||||||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgt 23122629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaa 265  Q
    |||||||||||||||||| ||  |||||||||||||||  ||||||||| |||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 24307625 - 24307692
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 273  Q
    ||||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 14547944 - 14547990
Alignment:
Q  232 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  14547944 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgt 14547990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 32032724 - 32032789
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||||| ||| |||   ||||||||||||||||| || ||||| |||||||||||||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 16056505 - 16056436
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||||| ||| ||||  ||| ||| |||||||||  ||||||  |||||||||||||||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 16056436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 16383373 - 16383442
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||||| ||| |||   ||||||||||||||| |  ||||||  |||||||||||||||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 16383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 24307895 - 24307830
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 273  Q
    ||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||| ||| |||   ||||||||||||||| | |||||||| |||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 43414681 - 43414612
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  |||| |||||| ||| | |||||||  ||||||||||||| |||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtg 43414612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 1180040 - 1179972
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgt 1179972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 12831047 - 12831115
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgt 12831115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 50526271 - 50526202
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||| |||||| |||||||| |||||||||||||||| | |||||||  |||||||||||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtg 50526202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 41236347 - 41236415
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgt 41236415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 50052532 - 50052460
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 50052460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 29239883 - 29239954
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||| ||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgt 29239954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 29548061 - 29547994
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||| ||| ||||  |||||||||||||||||  ||||||  |||||||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacg 277  Q
    ||||||||||| ||||||||  |||||||| |||||| | |||||||  |||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 55475189 - 55475256
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||| ||| ||||  ||||||||||||||| | |||||||  |||||||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 19670825 - 19670751
Alignment:
Q  201 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||| ||||||||||||||| ||| |||   ||||||||||||||| |  |||||| ||||||||||||||||||    
T  19670825 ttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 19670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 44536846 - 44536781
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||||| ||| ||| ||||||||||||||||| |  ||||||| |||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaataca-cccttgacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 47986207 - 47986273
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||||||||||| ||| |||   |||||||||||||||||  ||||||| |||||||||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgaca 47986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 480551 - 480479
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgt 480479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 42044471 - 42044399
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgt 42044399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 3481654 - 3481720
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacac 276  Q
    |||| |||||| |||||||  ||||||||||||||||   |||||||  ||||||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacac 3481720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 31910192 - 31910258
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacac 276  Q
    ||||||||||| ||||||||  ||||||| |||||||   |||||||  ||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 48183151 - 48183081
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   ||| ||||||||||| | |||||||  ||||||||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgt 48183081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 6034044 - 6034109
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 6034109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||| ||| ||||  ||||||||||||||||| |||||||   ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 11511562 - 11511494
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||| |||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgt 11511494  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 19329842 - 19329910
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgt 19329910  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 3784000 - 3784063
Alignment:
Q  215 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgt 3784063  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 19436289 - 19436219
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| ||||||||  ||||||| ||||||| |||||||||  ||||||||||||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgt 19436219  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 36362014 - 36361945
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgt 36361945  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 21234401 - 21234469
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||||||| ||||||||  ||||||| ||||||| | ||||||| |||||||||||| ||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgt 21234469  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 46033902 - 46033832
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||||| ||||| ||| ||||||||||||||| | ||| |||  |||| ||||||||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 46033832  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 3434561 - 3434630
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  |||||||||| |||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgt 3434630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 7727902 - 7727971
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||||| ||| |||   |||||||| |||||| || |||||||||||| ||||||||||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgaca 7727971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 18207176 - 18207249
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||||||| |||||||   ||||||||||||||| || ||||||  || |||||||||| |||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtg 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||  |||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 36362025 - 36362094
Alignment:
Q  209 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||| |||||| |||||||   |||||||| |||||||| |||||||  ||||||||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgt 36362094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 46374902 - 46374833
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    ||||||||||| ||||||||  ||||||||||| ||| | ||| |||  |||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtg 46374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 35137533 - 35137601
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| ||||||||||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgt 35137601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 35522877 - 35522945
Alignment:
Q  211 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 279  Q
    |||||||||| ||||||||  ||| ||||||||||| | ||| |||  |||||||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtg 35522945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 38044195 - 38044262
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||| |||||||||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 40957704 - 40957775
Alignment:
Q  207 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    ||||||| |||||| ||||||| | |||||||||||||||   ||||| |  ||||||||||||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgt 40957775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 7389387 - 7389457
Alignment:
Q  208 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||| |||||| |||||||   |||||||||||||||   |||||||  ||||||||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgt 7389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 40846218 - 40846152
Alignment:
Q  205 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatct 271  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |  ||||||| |||||||||||||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatct 40846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 35468959 - 35468894
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatct 271  Q
    |||||||| |||||| ||||||||  |||| |||||||||||| |||||||  |||| ||||||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 41423682 - 41423747
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 275  Q
    ||||||||||| ||||||||  |||| ||| |||||| || |||||| | ||||||||||||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgaca 41423747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 4999614 - 4999546
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||   |||| |||||||||| |||||||||  ||||||||||||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgt 4999546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 45223038 - 45223110
Alignment:
Q  206 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||  ||  ||||  |||||||||||||||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgt 45223110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 1029 - 961
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgt 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 1029 - 961
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgt 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 4029 - 4097
Alignment:
Q  210 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 278  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgt 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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