View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21275_high_38 (Length: 207)
Name: NF21275_high_38
Description: NF21275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21275_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 15150723 - 15150786
Alignment:
| Q |
128 |
atctggtttgatatgaacagaggttgaaaacttattcagcaagtaatgaagccacctatatttt |
191 |
Q |
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| T |
15150723 |
atctggtttgatatgaacagaggttgaaaacttattcagcaagtaatgaagccacctatatttt |
15150786 |
T |
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Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 15150606 - 15150657
Alignment:
| Q |
11 |
gaagaatatatactaagttcgctaggccctcttttcttatgagcgtattttc |
62 |
Q |
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| T |
15150606 |
gaagaatatatactaagttcgctaggccctcttttcttatgagcgtattttc |
15150657 |
T |
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