View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21276_high_10 (Length: 481)
Name: NF21276_high_10
Description: NF21276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21276_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 459; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 1 - 467
Target Start/End: Original strand, 2461871 - 2462337
Alignment:
| Q |
1 |
ttaaagggttggatgaaaaatccgattaaatcatcggtaagtactaattcagctgtgacacaaaattccttcaacaactttgattctgcttctagtagtg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2461871 |
ttaaagggttggatgaaaaatccgattaaatcatcggtaagtactaattcagttgtgacacaaaattccttcaacaactttgattctgcttctagtagtg |
2461970 |
T |
|
| Q |
101 |
gaacaaagggtgaaatattgtctgaaacatttgaatctttgtttggttttgagcctttagagtctttggagtcatcgaattctgaattttctcatcagtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2461971 |
gaacaaagggtgaaatattgtctgaaacatttgaatctttgtttggttttgagcctttagagtctttggagtcatcgaattctgaattttctcatcagtc |
2462070 |
T |
|
| Q |
201 |
tttgtcaccagacgcaacgattttacaagatgaaagtaagcctgatgttggttcggaaacaatgcccttttctttgcttgagaaatggcttcttgatgaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462071 |
tttgtcaccagacgcaacgattttacaagatgaaagtaagcctgatgttggttcagaaacaatgcccttttctttgcttgagaaatggcttcttgatgaa |
2462170 |
T |
|
| Q |
301 |
gcaagttgtcctgaaaaagtattaggttgtggtggtgatcatgctcaagttttctaaactggtttaggttttaatctgcattttcggtttagataaagct |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462171 |
gcaagttgtcctgaaaaagtattaggttgtggtggtgatcatgctcaagttttctaaactggtttaggttttaatctgcattttcggtttagataaagct |
2462270 |
T |
|
| Q |
401 |
atgaatctttatattgcgcggtgcaatactagcaaagctgaaatgtggttgtgatgatgttgttgct |
467 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
2462271 |
atgaatctttatattgcgcggtgcaatactagcaaagctgaaatgtggttgtgatgatgttgttgct |
2462337 |
T |
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