View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21276_high_21 (Length: 306)
Name: NF21276_high_21
Description: NF21276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21276_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 2212120 - 2212367
Alignment:
| Q |
34 |
aaggggttaattatatgagagtgaacaatattgagaaaataataagagagactatgtcaaaaatgtcgagtcctagcagttcagagattgaagagaaaag |
133 |
Q |
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| T |
2212120 |
aaggggttaattatgtgagattgaacaatattgagaaaataataagagagattatgtcaaaaatgtcgagtcctagcagttcagagattgaagagaaaag |
2212219 |
T |
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| Q |
134 |
agttacttcaattatccatgaagttgttgaagttgattgctctactgaacaagaggttacaaaggtacacaccaatcctaatcctcaacaattttttctt |
233 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2212220 |
agttacttcaattattcatgaagttgttgaagttgattgctctactgaacaagaggttacaaaggtacacaccaatcctaatcctcaacaattttttctt |
2212319 |
T |
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| Q |
234 |
ctcttgaaacatctatactgttcttgaatagtattatttgcaatattg |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2212320 |
ctcttgaaacatctatactgttcttgaatagtattatttgcaatattg |
2212367 |
T |
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