View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21276_low_17 (Length: 372)
Name: NF21276_low_17
Description: NF21276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21276_low_17 |
 | |
|
| [»] scaffold0425 (3 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 6257356 - 6257015
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
6257356 |
ttttgcactacacttgttcaccaatcttaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttgccttgcaacctaggc |
6257257 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
6257256 |
agcctccggatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattcactcttagtgacgatt |
6257157 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || |||||||||||| |
|
|
| T |
6257156 |
ttgaaatcttcgaatcctttccagaggagagtatgctgccatcaactattaactctcttgagttgacaaattgttcaaacctaacaaaaataaactacaa |
6257057 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6257056 |
gggtcttctccacctcacttcacttgaatctctatatattga |
6257015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 6140440 - 6140099
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
6140440 |
ttttgcactatacttattcaacaatcttaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttgccttgcaacctaggc |
6140341 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6140340 |
agcctccggatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttcaaactcaaatctctgaaacaattcagtcttagtgatgatt |
6140241 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| ||||||| || |||||||||||| |
|
|
| T |
6140240 |
ttgaaatcttggaatcctttccagaggagagtctgctgccatcaactattaactctcttgagttgacaaattgttcaaacctaaaaaaaataaactacaa |
6140141 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6140140 |
gggtcttctccacctcacttcacttgaatctctatatattga |
6140099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 6243471 - 6243130
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
6243471 |
ttttgcactacacttgttcaccaatcttaattctctcgtgttgtacgattgtccattgctggaatcatttttcgggaggcagttgccttccaacctaggc |
6243372 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6243371 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattcagtcttagtgatgatt |
6243272 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||| || |||||||| ||| |
|
|
| T |
6243271 |
ttgaaatcttcgagtcctttccagaggagagtatgctgccatcaagtattaactctcttgatttgaaaaattgttcctgcctaaaaaaaataaactgcaa |
6243172 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6243171 |
gggtcttctccacctcacttcacttgaatctctatatattga |
6243130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 6263836 - 6263495
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
6263836 |
ttttgcactacatttgttcaccaatcttaattctctcgtgttgtacaattgtccgtggctggaatcgttttttgagaggcagttgccttccaacctaagc |
6263737 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6263736 |
agcctccgaatagaaagatgccgtaatttgatggctacaatagaggagtggggtttgttccaactcaaatctctgaaacaattcagtcttagtgatgatt |
6263637 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||| ||| |
|
|
| T |
6263636 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattaactcttttgagttgacaaattgtcccaacctaagaaaaataaactgcaa |
6263537 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
6263536 |
gggtcttctccacctcacttcactcaaatctctatatattga |
6263495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 363
Target Start/End: Complemental strand, 6167051 - 6166706
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
||||||||||||| | |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
6167051 |
ttttgcactacacgtattcaacaatcttaattctctcgtgttgtacgattgtccattgctggaatcgttttttgggaggcagttgccttgcaacctaggc |
6166952 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6166951 |
agcctccggatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttcaaactcaaatctctgaaacaattaagtcttagtgatgatt |
6166852 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|||||||||| | || ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6166851 |
ttgaaatcttcgcattcttgccaaaggagactatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaaaaataaactacaa |
6166752 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattgatgat |
363 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6166751 |
cggtcttttccacctcacttcacttgaatctctatatattgatgat |
6166706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 359
Target Start/End: Original strand, 13275279 - 13275620
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
13275279 |
ttttgcactacatttgttcaccaatcttaattctctcgtgttgtacaattgtccgtggctggaatcgtttttttagaggcagttgccttccaacctaagc |
13275378 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13275379 |
agcctccgaatagaaagatgccgtaatttgatggctacaatagaggagtggggtttgttcaaactcaaatctctgaaacaattcagtcttagtgatgatt |
13275478 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
13275479 |
ttgaaatctttgagtcctttccagaagagagtatgctgccatcaactattaactctcttgagttgacaaattgttcaaacctaagaaaaataaactacaa |
13275578 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13275579 |
gggtcttctccacctcacttcacttgaatctctatatattga |
13275620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 6915255 - 6914914
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||| ||||||| |||||||||||||| ||||||||| |||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
6915255 |
ttttacactacaattgttcaccaatcttcattctctcgcgttgtatgagtgtccatggctggaatcattttttgggaggcagttgccttccaacctaggc |
6915156 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||||||||||| || || |||| |||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||| |
|
|
| T |
6915155 |
agcctccgaatagaaagatgtccaaacttgacggcttctagagaggagtggggtttgttccaactcaattctctaaaacaattatgtgttagtgatgatt |
6915056 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
| | |||||||| |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6915055 |
tgaatatcttggagtcctttccagaggagagtctgctgccatcaactattaaatctctcgagttgacaaattgttccaacctaaaaataataaactacaa |
6914956 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
6914955 |
gggtcttctccacctcacttcgcttgaatctctatatattga |
6914914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 359
Target Start/End: Complemental strand, 6898241 - 6897901
Alignment:
| Q |
19 |
tttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggca |
118 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||||| ||| |
|
|
| T |
6898241 |
tttgcactgcacttgttcaccaatcttcattctctggtgttgtacgatagtccatggctggaatcgttttgctggaggcagttgccttgcaacctatgca |
6898142 |
T |
|
| Q |
119 |
gcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattt |
218 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||| ||| || | ||||||||||| |
|
|
| T |
6898141 |
gcctccgaatagaaagatgtcctaaattgatggcttcgagagaggagtggggtttgttccaactcaattctctgaaacagttcagtgtaagtgatgattt |
6898042 |
T |
|
| Q |
219 |
tgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaag |
318 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6898041 |
tgaaatcttggagtcctttccggagaagagtctgctgccatcaactatgaaatctcttgagttaacaaattgttccaacctaagaataataaactataag |
6897942 |
T |
|
| Q |
319 |
ggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6897941 |
ggtcttctccacctcacttcacttgaatctctatatattga |
6897901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 359
Target Start/End: Original strand, 6593228 - 6593569
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| | ||||||| || |||||||| |||||||||||| || |
|
|
| T |
6593228 |
ttttgctctacacttgctcaccaatcttaattctctcgttttgtacgattgtccatggctagggtcgttttcaggcaggcagttgccttccaacctatgc |
6593327 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||||||||||| ||||| || |||||||| | ||||||||||||||||||||||||| | ||||||||||||||| || |||||||||||| |
|
|
| T |
6593328 |
agcctccgaatagaaagatgtcctaaattaatggcttcgagagaggagtggggtttgttccaactcgattctctgaaacaattcagtgttagtgatgatt |
6593427 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|| |||||||||| |||||||| ||||||||| |||| ||||||| ||||| || ||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
6593428 |
ttcaaatcttggagtcctttccggaggagagtctgcttccatcaactattaaatcctttgagttaacaaattgttccaacctaagaaaaataaactacaa |
6593527 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
6593528 |
gggtcttctccacctcacttcacttgaatctctatgtattga |
6593569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 359
Target Start/End: Original strand, 6723954 - 6724295
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| |||| || |
|
|
| T |
6723954 |
ttttgctctacacttgctcaccaatcttaattctctcgttttgtacgattgtccactgctggagtcgtttttcggcaggcagttaccttccagcctatgc |
6724053 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||||||||||| ||||| || |||||||| | ||||||||||||||||||||||||| | ||||||||||||||| || |||||||||||| |
|
|
| T |
6724054 |
agcctccgaatagaaagatgtcctaaattaatggcttcgagagaggagtggggtttgttccaactcgattctctgaaacaattcagtgttagtgatgatt |
6724153 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|| ||||||| || |||||||| ||||||||| |||| ||||||| ||||| || ||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
6724154 |
ttcaaatcttagagtcctttccggaggagagtctgcttccatcaactattaaatcctttgagttaacaaattgttccaacctaagaaaaataaactacaa |
6724253 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
6724254 |
gggtcttctccacctcacttcacttgaatctctatgtattga |
6724295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 6880670 - 6880329
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
|||| |||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||||| || |||| |||||||||||| |||||||||||| | |
|
|
| T |
6880670 |
ttttccactgcacttgttcaccaatcttaattctctcatgttgtacgactatccatggctggagtcattttctgggaggcagttgccttccaacctatgt |
6880571 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
||||||| |||| ||| ||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| || || ||||||||| |
|
|
| T |
6880570 |
agcctccaaataaaaaaatgtcctaagttgatggcttcgagagaggagtggggtttgttccaactcaattctctgaaacaattcagtgttggtgatgatt |
6880471 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
| ||||||||||| |||||||| ||||||||| |||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6880470 |
tggaaatcttggagtcctttccggaggagagtctgctgccatcaactatgaaatctcttgagttaacaaattgttccaacctaagaataataaactacaa |
6880371 |
T |
|
| Q |
318 |
gggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
||||||||||||| | || |||||||||||| ||| |||||| |
|
|
| T |
6880370 |
gggtcttctccacatgacctcacttgaatctctatgtattga |
6880329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 18 - 324
Target Start/End: Complemental strand, 7748156 - 7747850
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggc |
117 |
Q |
| |
|
||||||||| ||||||||||||||||| ||| |||| ||||||| ||| |||||||||| |||| ||||| ||||||||| | || ||||| ||| || |
|
|
| T |
7748156 |
ttttgcactgcacttgttcaccaatcttcattttctcatgttgtatgatagtccatggctagaattgttttccgggaggcagctgccctccaatctatgc |
7748057 |
T |
|
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
||||||||| |||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| |
|
|
| T |
7748056 |
agcctccgagtagaaagatgtcctaaattgatggcttcgagagaggagtggggtttgttccaactcaaatctctaaaacaattatgtgttagtgatgatt |
7747957 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
||||||||||||| |||||||| ||||||||| |||||||||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||||| |
|
|
| T |
7747956 |
ttgaaatcttggagtcctttccggaggagagtctgctgccatcaactattacatctcttgagttaaaaaattgttccaacctaagaagaataaactacaa |
7747857 |
T |
|
| Q |
318 |
gggtctt |
324 |
Q |
| |
|
||||||| |
|
|
| T |
7747856 |
gggtctt |
7747850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 150 - 359
Target Start/End: Complemental strand, 6236069 - 6235860
Alignment:
| Q |
150 |
ggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagt |
249 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6236069 |
ggcttcgagagaggagtggggtttgttccaactcaaatctttaaaacaattgagtgttagtgatgattttgaaatcttggaatcctttccagaggagagt |
6235970 |
T |
|
| Q |
250 |
atgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctcacttcacttgaatctt |
349 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6235969 |
atgctgccatcaactattaactctcttgagttgacaaattgttccaacctaagaaaaatcaactacaagggtcttctccacctcacttcacttgaatctc |
6235870 |
T |
|
| Q |
350 |
tatatattga |
359 |
Q |
| |
|
|||||||||| |
|
|
| T |
6235869 |
tatatattga |
6235860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 6851153 - 6851244
Alignment:
| Q |
18 |
ttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttcca |
109 |
Q |
| |
|
|||||||| ||| ||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6851153 |
ttttgcaccacaattgttcaacaatcttgattctcttgttttgtacgattgtccatggctggaatcgttttttgggaggcagttacattcca |
6851244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 334
Target Start/End: Complemental strand, 6941952 - 6941777
Alignment:
| Q |
159 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
258 |
Q |
| |
|
|||||||||||||||||||||||||| || || | |||||| | |||||||||| ||||||| |||| ||||| |||||||||| | |||||||| |
|
|
| T |
6941952 |
agaggagtggggtttgttccaactcagttccttgttagaattctctgttagtgatgagtttgaaaatgtggagtccttcccagaggagaatctgctgcca |
6941853 |
T |
|
| Q |
259 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
||||| |||| |||| | |||| ||||||||| || ||||||||||| ||| | |||||| |||||||||||| |
|
|
| T |
6941852 |
ccaagtcttactgatcttaatttgagaaattgttcaaagctaagaataatgaacaaaaagggttttctccacctca |
6941777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 6481986 - 6482087
Alignment:
| Q |
146 |
tgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagagga |
245 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||||||||||||| ||||||||| | || | |||||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
6481986 |
tgattgcttcaagagaagagtggggtttgttccaactcaattctctgaaagagtttagagttagtgatgagtttgaaaacgtggaatcctttccagagga |
6482085 |
T |
|
| Q |
246 |
ga |
247 |
Q |
| |
|
|| |
|
|
| T |
6482086 |
ga |
6482087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 334
Target Start/End: Complemental strand, 8469574 - 8469401
Alignment:
| Q |
161 |
aggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatc |
260 |
Q |
| |
|
||||||||||||||||| |||||| || ||||| ||||| | |||| ||||| ||||||| | | || ||||| |||||||||||| |||||||| | |
|
|
| T |
8469574 |
aggagtggggtttgttcagactcaattccttgaaatcattctttgttagcgatgagtttgaaaacgtagagtccttcccagaggagagtctgctgccacc |
8469475 |
T |
|
| Q |
261 |
aagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
|| | |||| | |||| | |||| |||||||| || ||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
8469474 |
aactcttacgtatcttaatttgaataattgttcaaagctaagaataatgaacaacaagggttttctccacctca |
8469401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 334
Target Start/End: Complemental strand, 7585887 - 7585712
Alignment:
| Q |
159 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
258 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| | ||| || |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
7585887 |
agagcagtggggtttgttccaactcaattctctgagagctttcggtgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
7585788 |
T |
|
| Q |
259 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
||| |||| || ||| ||| | |||||||| || ||||||||||| ||| | |||||| |||||||||||| |
|
|
| T |
7585787 |
ccaactattcactttctctggttctctaattgttcaaagctaagaataatgaacaaaaagggttttctccacctca |
7585712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 332
Target Start/End: Original strand, 4390932 - 4391102
Alignment:
| Q |
162 |
ggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatca |
261 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||| | ||| | || ||||||| ||||||| |||| ||||| |||||||||||| |||| ||| |
|
|
| T |
4390932 |
ggagtggggtttgttccaactcaattctctaaaagatttcattgttggtgatgactttgaaaatgtggagtccttcccagaggagagtctgctaccagat |
4391031 |
T |
|
| Q |
262 |
agtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacct |
332 |
Q |
| |
|
| |||| ||||||| |||| | | ||||| || ||||||||||||||| |||||||||||||||||| |
|
|
| T |
4391032 |
aatattgactctcttagcttgagagaatgttcaaagttaagaataataaactgcaagggtcttctccacct |
4391102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 334
Target Start/End: Original strand, 8570959 - 8571140
Alignment:
| Q |
153 |
ttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatg |
252 |
Q |
| |
|
||||| |||||| ||||||||||||||||| || ||||||||| ||| | || |||||| ||| ||| |||||||||| |||||||||||| || |
|
|
| T |
8570959 |
ttcaagagaggattggggtttgttccaacttaactctctgaaatcatttagagttgttgatgactttaaaaatgtggaatccttcccagaggagagtttg |
8571058 |
T |
|
| Q |
253 |
ctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
|||||| ||| | || | ||||| ||| |||||||| || ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
8571059 |
ctgccaccaactcttcacactctttgtttgtataattgttcaaagctaagaataatgaactacaagggacttctccacctca |
8571140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 326
Target Start/End: Complemental strand, 5278719 - 5278511
Alignment:
| Q |
118 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||||||| | | ||||||| | |||| || |||| | ||||||||||||||||| |||| || ||||||||| | ||| | |||||||||| | |
|
|
| T |
5278719 |
agcctccgaataaacaaatgccctgaactgattgcatcaagaaaggagtggggtttgttcgaactaaattctctgaaagagttcagagttagtgatgact |
5278620 |
T |
|
| Q |
218 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
317 |
Q |
| |
|
|||||| | |||| ||||| || ||||||| | | ||||| ||| | ||| | || || | ||| ||||||||| || ||||||||||| |||| ||| |
|
|
| T |
5278619 |
ttgaaagcatggactccttcccggaggagaatctactgcccccaactcttaacactattcatttggaaaattgttcaaagctaagaataatcaactccaa |
5278520 |
T |
|
| Q |
318 |
gggtcttct |
326 |
Q |
| |
|
||||||||| |
|
|
| T |
5278519 |
gggtcttct |
5278511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 326
Target Start/End: Complemental strand, 5261951 - 5261784
Alignment:
| Q |
159 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
258 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||| ||||| ||||||| || ||||| | |||| || || || ||||||| | | |||||| |
|
|
| T |
5261951 |
agaggagtggggtttgttcgaactcaattctctgaaagaattcaaagttagtgacgactttgagaatgtggagtctttcccggaggagaatctactgcca |
5261852 |
T |
|
| Q |
259 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttct |
326 |
Q |
| |
|
||| | ||| |||||| ||| ||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
5261851 |
ccaactcttaagtctcttcgtttggaaaattgttcaaagctaagaataataaactacaagggtcttct |
5261784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 334
Target Start/End: Original strand, 6450864 - 6450986
Alignment:
| Q |
212 |
atgattttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaa |
311 |
Q |
| |
|
|||| ||||||| | |||| ||||| || ||||||| | |||||||| ||| | || || | ||| | |||| |||||||| |||||||||||||| || |
|
|
| T |
6450864 |
atgactttgaaaacgtggagtccttccccgaggagaatctgctgccaccaactcttcccacccttcaattgaataattgttcaaacctaagaataatgaa |
6450963 |
T |
|
| Q |
312 |
ctacaagggtcttctccacctca |
334 |
Q |
| |
|
|||||||||| |||||||||||| |
|
|
| T |
6450964 |
ctacaagggttttctccacctca |
6450986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 334
Target Start/End: Original strand, 6782339 - 6782520
Alignment:
| Q |
153 |
ttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatg |
252 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| || ||||| |||| | ||| |||||| ||||||| | |||| ||||| |||||||||| | | |
|
|
| T |
6782339 |
ttcaagagaggagtggggtttgttccaactcaattccttgaaatctttctttgttactgatgagtttgaaaacgtggagtccttcccagaggagaatcta |
6782438 |
T |
|
| Q |
253 |
ctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
|| ||||||| || ||||| | || ||||||||| || ||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
6782439 |
ctaccatcaacccttgagactctttatgtggaaaattgttcaaagctaagaataatgaacaacaagggttttctccacctca |
6782520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 6945290 - 6945185
Alignment:
| Q |
153 |
ttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatg |
252 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||| | ||||| | |||||||||| ||||||| | |||| || || |||||||||| | || |
|
|
| T |
6945290 |
ttcaagagaggagtggggtttgttccaactcaattctctcattgaattcgttgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctg |
6945191 |
T |
|
| Q |
253 |
ctgcca |
258 |
Q |
| |
|
|||||| |
|
|
| T |
6945190 |
ctgcca |
6945185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 6730866 - 6730914
Alignment:
| Q |
286 |
aattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
6730866 |
aattgttcaaacctaagaataatgaactacaagggttttctccacctca |
6730914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 334
Target Start/End: Complemental strand, 8587932 - 8587764
Alignment:
| Q |
166 |
tggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatcaagta |
265 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| ||| |||||||||| ||||||| | |||| ||||| |||||||||| | | |||||| ||| | |
|
|
| T |
8587932 |
tggggtttgttccaactcaattctctaaaatctttcaaagttagtgatgagtttgaaaacgtggagtccttcccagaggagaatcttctgccaccaactc |
8587833 |
T |
|
| Q |
266 |
ttacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
|| ||| || |||| |||||||| || |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
8587832 |
ttgagtctatttggttgtttaattgttcaaagctaagaataataaactgcaaaggtcttctccacctca |
8587764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 334
Target Start/End: Original strand, 6523499 - 6523674
Alignment:
| Q |
159 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
258 |
Q |
| |
|
|||||||||||| |||||||||||||| || ||| | | |||| | |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
6523499 |
agaggagtgggggttgttccaactcaattccttgagatatttctttgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
6523598 |
T |
|
| Q |
259 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
||| | | | ||||||| || ||||||| || ||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
6523599 |
ccaactctggacactcttgatttatatgattgttcaaagctaagaataatgaacaacaagggttttctccacctca |
6523674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 6841584 - 6841683
Alignment:
| Q |
159 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
258 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||| ||| || |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
6841584 |
agaggagtggggtttgttccaactcaattccttgaaatggttcagtgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
6841683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 332
Target Start/End: Complemental strand, 5265955 - 5265922
Alignment:
| Q |
299 |
taagaataataaactacaagggtcttctccacct |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
5265955 |
taagaataataaactacaagggtcttctccacct |
5265922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 5296771 - 5296663
Alignment:
| Q |
146 |
tgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagagga |
245 |
Q |
| |
|
|||| ||||| | |||| ||||||| |||||||||||||| ||||||||| ||||| | |||| ||||| ||||||| | |||| || || || ||||| |
|
|
| T |
5296771 |
tgatagcttcgagagagaagtgggggttgttccaactcaattctctgaaagaattcattgttagcgatgactttgaaaacatggagtcattcccggagga |
5296672 |
T |
|
| Q |
246 |
gagtatgct |
254 |
Q |
| |
|
|||| |||| |
|
|
| T |
5296671 |
gagtttgct |
5296663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 332
Target Start/End: Complemental strand, 8452610 - 8452487
Alignment:
| Q |
209 |
gtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataat |
308 |
Q |
| |
|
||||||||||||||| | |||| ||||||||| |||||||| |||||||| ||| | || | | |||| | |||| || ||||| || || |||||||| |
|
|
| T |
8452610 |
gtgatgattttgaaaacgtggagtcctttccaaaggagagtctgctgccaccaactctttcgtatcttaatttgaataactgttcaaagctcagaataat |
8452511 |
T |
|
| Q |
309 |
aaactacaagggtcttctccacct |
332 |
Q |
| |
|
||| || ||||| |||||||||| |
|
|
| T |
8452510 |
gaacaacgagggttttctccacct |
8452487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Complemental strand, 5248050 - 5248017
Alignment:
| Q |
299 |
taagaataataaactacaagggtcttctccacct |
332 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
5248050 |
taagaataataaacttcaagggtcttctccacct |
5248017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 6482129 - 6482173
Alignment:
| Q |
289 |
tgttccaacctaagaataataaactacaagggtcttctccacctc |
333 |
Q |
| |
|
||||| || ||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
6482129 |
tgttcaaagctaagaataatgaactacaagggttttctccacctc |
6482173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 13521 - 13608
Alignment:
| Q |
130 |
gaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
217 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |
|
|
| T |
13521 |
gaaagatgtcctaaattgatggcttcaagagaggagtggggtttgttccaactcaattctctgaaacaattcagtgttagtgatgatt |
13608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 359
Target Start/End: Original strand, 13621 - 13708
Alignment:
| Q |
272 |
ctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctcacttcacttgaatctttatatattga |
359 |
Q |
| |
|
|||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
13621 |
ctcttgagttgaaaaattgttccaatctaggaataataaactacaagggtcttctctacctcactttgcttgaatctctatatattga |
13708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 9644 - 9707
Alignment:
| Q |
24 |
actacacttgttcaccaatctaaattctctcgtgt-tgtacgattgtccatggctggaatcgttt |
87 |
Q |
| |
|
||||||||||||||||||||| |||| ||| || | |||||||||||||| ||||||||||||| |
|
|
| T |
9644 |
actacacttgttcaccaatcttaattatct-gtatctgtacgattgtccagagctggaatcgttt |
9707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 6575469 - 6575514
Alignment:
| Q |
289 |
tgttccaacctaagaataataaactacaagggtcttctccacctca |
334 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6575469 |
tgttcaaagctaagaataatgaactacaagggtcttctccacctca |
6575514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 186 - 87
Alignment:
| Q |
159 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
258 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| | ||||| |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
186 |
agaggagtggagtttgttccaactcaattctctgtatcaatttgaagttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
87 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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