View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21277_low_10 (Length: 271)
Name: NF21277_low_10
Description: NF21277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21277_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 27777126 - 27777390
Alignment:
| Q |
1 |
tcctttacagaaaaacattcatgatatatctcatttcaaggtctttggatctttatgctttgcttctcatagaaagaaatttcaggctagagctaaaaag |
100 |
Q |
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||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27777126 |
tcctttacaaaaaaa-attcatgatatatctcatttcaaggtctttggatctttatgctttgcttctcatagaaagaaatttcaggctagagctaaaaag |
27777224 |
T |
|
| Q |
101 |
tgtgttttccttggccataaagatgtaaaagggttcgttttatttgatcttattaagagagaattcttttttatctagacatgtgatatttttatgaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27777225 |
tgtgttttccttggccataaagatgtaaaagggttcgttttatttgatcttattaagagagaattcttttttatctagacatgtgatatttttatgaaaa |
27777324 |
T |
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| Q |
201 |
cacatttccttttaatttacttctttatttgcgtcctccaattcatctactcttacctttcctatg |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27777325 |
cacatttccttttaatttacttctttatttgcgtcctccaattcatctactcttacctttcctatg |
27777390 |
T |
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