View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21277_low_11 (Length: 250)
Name: NF21277_low_11
Description: NF21277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21277_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 9135609 - 9135717
Alignment:
| Q |
9 |
cattattctcatctggtcttgcatgagggttatatcatgcacattatgagtcttttacaaagagtcatttgaaacatttcttggtttggacttcgaccca |
108 |
Q |
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| T |
9135609 |
cattattctcatctggtcttgtgtaagggttatatcatgcacattatgagtcttttacaaagagtcatttgaaacatttcttggtttggacttcgatcca |
9135708 |
T |
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| Q |
109 |
aacaacaac |
117 |
Q |
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||||||||| |
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| T |
9135709 |
aacaacaac |
9135717 |
T |
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Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 9135761 - 9135834
Alignment:
| Q |
167 |
aaagtgattagtgaatttgatgtactcatttcttacgtggattttcctaaaatacattcaatgtctaacttcaa |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9135761 |
aaagtgattagtgaatttgatgtactcatttcttacgtggattttcctaaaatacattcaatgtctaacttcaa |
9135834 |
T |
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