View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21279_high_30 (Length: 364)
Name: NF21279_high_30
Description: NF21279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21279_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 32650755 - 32651102
Alignment:
| Q |
1 |
gttgtggtaagtgacttccatcttaatatgtacaaattcaagaatcctctcaagcatattgtgactggttattgttttatcatccaaggctaaactttga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32650755 |
gttgtggtaagtgacttccatcttaatatgtacaaattcaagaatcctctcaagcatattgtgactggttattgttttatcatccaaggctaaactttga |
32650854 |
T |
|
| Q |
101 |
tcttacctagcataatagtgtactacatgtgcaagttaactctgaattttattcctaatatataatgaattcaattagaaaataatcattgataggtgtg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32650855 |
tcttacctagcataatagtgtactacatgtgcaagttaactctgaattttattactaatatataatgaattcaattagaaaataatcattgataggtgtg |
32650954 |
T |
|
| Q |
201 |
ttctcgtctgaaaactcaagtctagatcacacctctgttaagggtgagtaacgtcctgatttaaaagataacctagtattttgagaattgcgtgaatatc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32650955 |
ttctcgtctgaaaactcaagtctagatcacacctctattaagggtgagtaacgtcatgatttaagagataacctagtattttgagaattgcgtgaatatc |
32651054 |
T |
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| Q |
301 |
tctatcatttttctcctcttattaccatgtatatgagtgaccacctcc |
348 |
Q |
| |
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|||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
32651055 |
tctatcctttttctcctcttattaccatgtatatgagtgaccacctcc |
32651102 |
T |
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