View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21279_high_43 (Length: 223)
Name: NF21279_high_43
Description: NF21279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21279_high_43 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 32375226 - 32375411
Alignment:
| Q |
20 |
gaaccataccattaaaatgaaaagtttctgtaaactccctaagaacttcgaggtaaaaaccatcagggtcaccaagatattcgccgagcgcctttttgtc |
119 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
32375226 |
gaaccataccattaaaatgaaaagtttctgtaaactccctaagaacttcgaggtaaaaactatcagggtcaccaagatattcgccgagcgcctttttgtc |
32375325 |
T |
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| Q |
120 |
tagaccaggtgtgaaccggaagaagtaagcatacgacttcggatcaggaggatcggagattaacttagcatgcttcaagtactcta |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32375326 |
tagaccaggtgtgaaccggaagaagtaagcatacgacttcggatcaggaggatcggagattaacttagcatgcttcaagtactcta |
32375411 |
T |
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