View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21280_low_10 (Length: 531)
Name: NF21280_low_10
Description: NF21280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21280_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 91 - 456
Target Start/End: Original strand, 27931607 - 27931972
Alignment:
| Q |
91 |
taagtctttgaaggaacgtggaccatgattgtatgtgatgtgaaggtattgttgatttgagtcagattcttggtttgaatcttggtcttctagtgttggg |
190 |
Q |
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| T |
27931607 |
taagtctttgaaggaacgtggaccatgattgtatgtgatgtgaaggtattgttgatttgagtcagattcttggtttgaatcttggtcttctagtgttggg |
27931706 |
T |
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| Q |
191 |
tatgttgtgattattgagggttttggtaagaaaggttgtgataataaagatgatgaagatgaagagtctttgttgtttggatcatccatgattatagttt |
290 |
Q |
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| T |
27931707 |
tatgttgtgattattgagggttttggtaagaaaggttgtgataataaagatgatgaagatgaagagtctttgttgtttggatcatccatgattatagttt |
27931806 |
T |
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| Q |
291 |
tagctcaannnnnnnnnnnnnnnnnnnnnngaacaagattttgaggttttatgtttgaggatctctgtgtttgaatggtggtttgagtgaggtaatgttg |
390 |
Q |
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| T |
27931807 |
tagctcaa-agagagagagagagaaaaaaagaacaagattttgaggttttatgtttgaggatctctgtgtttgaatggtggtttgagtgaggtaatgttg |
27931905 |
T |
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| Q |
391 |
ttgggttttattttatttgtttgttggactc-nnnnnnnttcaatacagagtggctgggcaataaag |
456 |
Q |
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| T |
27931906 |
ttgggttttgttttatttgtttgttggactcaaaaaaaattcaatacagagtggctgggcaataaag |
27931972 |
T |
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