View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21280_low_27 (Length: 311)
Name: NF21280_low_27
Description: NF21280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21280_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 31275118 - 31274824
Alignment:
| Q |
1 |
gtgaaaacaatttttgtattatcatcagaattttctgggaataatttcttgcagagtttgttacaagaacaattaaaaatacaagttgctgcagaatatt |
100 |
Q |
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| T |
31275118 |
gtgaaaacaatttttgtattatcatcacaattttctgggaataatttcttgcagagtttgttacaagaacaattaaaaatacaagttgctgcagaatatt |
31275019 |
T |
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| Q |
101 |
agaaactaactgccaaaaaatatcctaacctctaagaattagagagtccaatttctacgaataggctgccaacaaaagattgttttttagtattgatatt |
200 |
Q |
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| T |
31275018 |
agaaactaactgccaaaaaatatcctaacctctaagaattagagagtccaatttctacgaataggctgccaacaaaagattgttttttagtattgatatt |
31274919 |
T |
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| Q |
201 |
ttacaatgtagacatgatttgtcttgtgttttctatttcaagcaacatgagaatctttaggcacttatttttgtacatgatttccatttcctatt |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31274918 |
ttacaatgtagacatgatttgtcttgtgttttctatttcaagcaacatgagaatctttaggcacttatttttgtacatgatttccatttcctatt |
31274824 |
T |
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