View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21280_low_4 (Length: 690)

Name: NF21280_low_4
Description: NF21280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21280_low_4
NF21280_low_4
[»] chr6 (21 HSPs)
chr6 (24-232)||(16555048-16555253)
chr6 (24-232)||(16578302-16578507)
chr6 (24-232)||(16616873-16617078)
chr6 (24-232)||(16631604-16631809)
chr6 (24-232)||(16653291-16653496)
chr6 (29-207)||(25421490-25421669)
chr6 (29-207)||(34167264-34167443)
chr6 (29-207)||(6027431-6027609)
chr6 (29-207)||(13154099-13154278)
chr6 (29-207)||(33341908-33342089)
chr6 (29-207)||(34165042-34165221)
chr6 (28-208)||(27648042-27648211)
chr6 (101-207)||(6136108-6136216)
chr6 (164-232)||(16552976-16553044)
chr6 (164-232)||(16629532-16629600)
chr6 (28-199)||(3072580-3072745)
chr6 (24-114)||(412281-412369)
chr6 (126-207)||(13159051-13159134)
chr6 (28-183)||(6097285-6097436)
chr6 (89-199)||(2171350-2171456)
chr6 (138-202)||(412374-412437)
[»] chr5 (16 HSPs)
chr5 (24-207)||(10593436-10593621)
chr5 (29-207)||(40380275-40380454)
chr5 (29-207)||(25078305-25078484)
chr5 (29-207)||(25136274-25136453)
chr5 (29-207)||(40382486-40382665)
chr5 (28-205)||(29720546-29720721)
chr5 (29-207)||(16544593-16544774)
chr5 (28-205)||(29722706-29722881)
chr5 (28-206)||(29750969-29751145)
chr5 (29-207)||(16546815-16546996)
chr5 (28-207)||(22536103-22536276)
chr5 (28-202)||(9789042-9789209)
chr5 (28-202)||(18441462-18441633)
chr5 (28-199)||(16409658-16409824)
chr5 (28-202)||(26178065-26178234)
chr5 (53-199)||(30182790-30182933)
[»] chr1 (7 HSPs)
chr1 (24-234)||(9036594-9036801)
chr1 (29-207)||(44203816-44203995)
chr1 (24-206)||(21054136-21054314)
chr1 (28-206)||(9987384-9987558)
chr1 (28-202)||(40282559-40282730)
chr1 (28-182)||(20622072-20622223)
chr1 (28-202)||(51765578-51765747)
[»] chr3 (19 HSPs)
chr3 (28-207)||(25637610-25637793)
chr3 (29-207)||(3617634-3617813)
chr3 (28-208)||(45283168-45283346)
chr3 (28-208)||(54635307-54635484)
chr3 (29-207)||(4598328-4598507)
chr3 (29-207)||(4600549-4600728)
chr3 (29-207)||(10211579-10211758)
chr3 (29-207)||(10209359-10209538)
chr3 (29-207)||(10056403-10056582)
chr3 (29-207)||(10058625-10058804)
chr3 (29-207)||(10060847-10061026)
chr3 (29-207)||(10063069-10063248)
chr3 (29-207)||(10065291-10065470)
chr3 (29-207)||(10067490-10067669)
chr3 (28-208)||(6716682-6716860)
chr3 (28-202)||(7779821-7779990)
chr3 (28-202)||(23199957-23200125)
chr3 (28-199)||(801274-801435)
chr3 (28-132)||(23197823-23197926)
[»] chr7 (11 HSPs)
chr7 (24-207)||(1560470-1560656)
chr7 (29-207)||(6594363-6594542)
chr7 (29-207)||(6592145-6592324)
chr7 (29-207)||(18388565-18388744)
chr7 (29-207)||(18392001-18392180)
chr7 (29-207)||(32060127-32060306)
chr7 (28-208)||(20344079-20344256)
chr7 (28-199)||(43503975-43504140)
chr7 (76-199)||(24790230-24790349)
chr7 (28-134)||(39731550-39731656)
chr7 (32-80)||(24790028-24790074)
[»] chr2 (7 HSPs)
chr2 (29-207)||(13655834-13656015)
chr2 (29-207)||(12647191-12647370)
chr2 (28-182)||(6266874-6267023)
chr2 (29-202)||(32289748-32289916)
chr2 (28-199)||(4484151-4484317)
chr2 (28-134)||(30833527-30833633)
chr2 (53-133)||(4503017-4503099)
[»] scaffold0565 (1 HSPs)
scaffold0565 (29-207)||(2409-2588)
[»] scaffold0137 (1 HSPs)
scaffold0137 (29-207)||(6456-6638)
[»] chr4 (7 HSPs)
chr4 (29-207)||(7122867-7123046)
chr4 (29-207)||(8395787-8395967)
chr4 (29-207)||(7125086-7125265)
chr4 (29-207)||(8393578-8393758)
chr4 (29-207)||(5136249-5136429)
chr4 (29-207)||(5138474-5138654)
chr4 (53-196)||(31495130-31495271)
[»] scaffold1808 (1 HSPs)
scaffold1808 (29-186)||(49-205)
[»] scaffold0674 (1 HSPs)
scaffold0674 (29-186)||(3554-3710)
[»] chr8 (9 HSPs)
chr8 (29-210)||(25690139-25690316)
chr8 (28-208)||(3439686-3439862)
chr8 (29-207)||(15290708-15290887)
chr8 (29-207)||(15471077-15471256)
chr8 (29-207)||(42575130-42575308)
chr8 (28-202)||(2627918-2628087)
chr8 (53-133)||(31218459-31218541)
chr8 (151-199)||(3303494-3303541)
chr8 (151-199)||(43036720-43036767)
[»] scaffold0491 (2 HSPs)
scaffold0491 (28-134)||(11042-11148)
scaffold0491 (28-134)||(8616-8722)
[»] scaffold0286 (1 HSPs)
scaffold0286 (89-199)||(11804-11911)


Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 16555048 - 16555253
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16555048 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 16555147  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggca 223  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  16555148 gttgcttgcac---acactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaa 16555244  T
Q  224 ttcacaaca 232  Q
    |||||||||    
T  16555245 ttcacaaca 16555253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 16578507 - 16578302
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16578507 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 16578408  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggca 223  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  16578407 gttgcttgcac---acactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaa 16578311  T
Q  224 ttcacaaca 232  Q
    |||||||||    
T  16578310 ttcacaaca 16578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 16616873 - 16617078
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616873 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 16616972  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggca 223  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  16616973 gttgcttgcac---acactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaa 16617069  T
Q  224 ttcacaaca 232  Q
    |||||||||    
T  16617070 ttcacaaca 16617078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 16631604 - 16631809
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631604 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 16631703  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggca 223  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  16631704 gttgcttgcac---acactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaa 16631800  T
Q  224 ttcacaaca 232  Q
    |||||||||    
T  16631801 ttcacaaca 16631809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 16653291 - 16653496
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16653291 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 16653390  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggca 223  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  16653391 gttgcttgcac---acactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaa 16653487  T
Q  224 ttcacaaca 232  Q
    |||||||||    
T  16653488 ttcacaaca 16653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 25421490 - 25421669
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  25421490 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 25421587  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  25421588 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 25421669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 34167264 - 34167443
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||    
T  34167264 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttggttcctagatttgatctaggtggtgttttgttgttttttg 34167361  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||   |||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  34167362 cttgctcaatattttttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 34167443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 6027431 - 6027609
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  | | |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  6027431 ttgttttcttcttccctc--cat-tttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 6027527  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||||||||||| ||||| |||||||||| |||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  6027528 cttgcacaatacaccttgttaggtggttacccctctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 6027609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 13154099 - 13154278
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||    
T  13154099 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttg 13154196  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||  ||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  13154197 cttgctcaataagctttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13154278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 33342089 - 33341908
Alignment:
Q  29 ttgttttcttcttccctctcc-ttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgt 125  Q
    ||||||||||||||||||||| |||||||||||||| ||   |||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  33342089 ttgttttcttcttccctctcctttgtttatcttgtgtttagttgctt--tgtttcacacttggttcctagattagatctaggtggtgttttgttgtttct 33341992  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  33341991 tgcttgcacaataagctttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 33341908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 34165042 - 34165221
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  34165042 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 34165138  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  34165139 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 34165221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 27648042 - 27648211
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||  |      || ||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  27648042 tttgttttcttcttccctctcctt--ttatcttgtgtat------tgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 27648133  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatct 208  Q
    ||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  27648134 cttgcac-acacactttgttcggtggttaccactctcctttgctccacacatcat--tcttgtattggtgtggttcgatct 27648211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 6136216 - 6136108
Alignment:
Q  101 atctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgt 198  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||| |    
T  6136216 atctaggtggtgttttgttgtttcttgcttgcacaatacactttgtttggtggttaccactctccgttgctccacacatcattattctttgtattggtat 6136117  T
Q  199 ggttcgatc 207  Q
    |||||||||    
T  6136116 ggttcgatc 6136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 16552976 - 16553044
Alignment:
Q  164 ccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggcattcacaaca 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16552976 ccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16553044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 16629532 - 16629600
Alignment:
Q  164 ccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggcattcacaaca 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16629532 ccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16629600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 3072745 - 3072580
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggt-gttttgttgtttgtt 126  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||| || ||  |||||||||||||||||||||||| ||| |  |||||||| || ||    
T  3072745 tttgttttcctcttccctctcctt--ttatcttgtgcttgtgttttatgcttttcacttgtttcctagattagatctatgtgctatttttgttgattatt 3072648  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    ||||||||   |||||||| || |||||||| ||| ||||| ||||||||||||| ||||| |||||||||||    
T  3072647 gcttgcac---acactttg-ttagtggttactactttcctttgctccacacatca-tatttcgtattggtgtg 3072580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 412281 - 412369
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgtt 114  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||  ||||||||  |||||||| ||||||||||||||||||| ||||    
T  412281 tgtatttgttttcttcttccctctcctt--ttatcttgtgcttgtgtattgtgtttttcacttgttacctagattagatctaggtgctgtt 412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 13159051 - 13159134
Alignment:
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||| |||||  ||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  13159051 tgcttgctcaataagctttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13159134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 6097436 - 6097285
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcac-acttgtttcctagattagatctaggtggtg-ttttgttgtttgt 125  Q
    ||||||||| ||||||||||||||||  ||||||||||||||  ||||||||  | ||||||| ||||||||||||| ||||| || |||||||| || |    
T  6097436 tttgttttcctcttccctctccttgt--atcttgtgattgtgtattgtgtttttccacttgttacctagattagatcaaggtgctgtttttgttgattat 6097339  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcatt 183  Q
     ||||||||   |||||||| || |||||||| ||| ||| | |||||||||||||||    
T  6097338 agcttgcac---acactttg-ttagtggttactactttccgttgctccacacatcatt 6097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 2171456 - 2171350
Alignment:
Q  89 ttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattt 187  Q
    ||||||||||||||||||||| |||| |||||| || ||||||||||   |||||||| || |||||||| ||| ||||| ||||||||||||| || ||    
T  2171456 ttcctagattagatctaggtgctgttattgttgattattgcttgcac---acactttg-ttagtggttactactttcctttgctccacacatca-tagtt 2171362  T
Q  188 tgtattggtgtg 199  Q
     |||||||||||    
T  2171361 cgtattggtgtg 2171350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 412374 - 412437
Alignment:
Q  138 acactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||| || || ||||||||||||||    
T  412374 acactttgtttggtggttactactttcctttgctccacacatca-tacttggtattggtgtggtt 412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 1e-86; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 10593436 - 10593621
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10593436 tgtatttgttttctacttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 10593535  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10593536 gttgcttgcacaatacactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 40380275 - 40380454
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  40380275 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 40380372  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  40380373 cttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 40380454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 25078305 - 25078484
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25078305 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 25078402  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  25078403 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattcttctttgtattggtgtggttcgatc 25078484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 25136274 - 25136453
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25136274 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 25136371  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  25136372 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattcttctttgtattggtgtggttcgatc 25136453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 40382486 - 40382665
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  40382486 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 40382583  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||  ||||||||||||||||||||||    
T  40382584 cttgcacaataaactttgtttggtggttaccactctccgccgctccacacatcattattctttgtattggtgtggttcgatc 40382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 29720546 - 29720721
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  29720546 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 29720643  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat-tattttgtattggtgtggttcga 205  Q
    |||| || | |||||||||||||||||||||||||||||| |||||||||| ||| | | |||||||||||||||||||    
T  29720644 cttgtac-acacactttgtttggtggttaccactctcctttgctccacacaacatatttcttgtattggtgtggttcga 29720721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 16544593 - 16544774
Alignment:
Q  29 ttgttttcttcttccctctcc-ttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgt 125  Q
    ||||||||||||||||||||| |||||||||||||| ||   |||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  16544593 ttgttttcttcttccctctcctttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttct 16544690  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  16544691 tgcttgctcaataagctttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 16544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 29722706 - 29722881
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  29722706 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 29722803  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat-tattttgtattggtgtggttcga 205  Q
    |||| || | |||||||||||||||||||||||||| ||| |||||||||| ||| | | |||||||||||||||||||    
T  29722804 cttgtac-acacactttgtttggtggttaccactctactttgctccacacaccatatttcttgtattggtgtggttcga 29722881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 28 - 206
Target Start/End: Complemental strand, 29751145 - 29750969
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||   |||||||| ||||||||| |||||||| |||||||||||||||||||| || |||    
T  29751145 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtactgtgtttctcacttgttttctagattatatctaggtggtgttttgttgattattg 29751048  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat-tattttgtattggtgtggttcgat 206  Q
    ||||||| | |||| ||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||||||||||    
T  29751047 cttgcac-acacacattgtttggtggttaccactctcctttgctccacacatcatatttcttgtattggtgtggttcgat 29750969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 16546815 - 16546996
Alignment:
Q  29 ttgttttcttcttccctctcc-ttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgt 125  Q
    ||||||||||||||||||||| |||||||||||||| ||   |||||  |||||||||||||||||||||||| ||| |||||||||||||||||||| |    
T  16546815 ttgttttcttcttccctctcctttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatttaggtggtgttttgttgtttct 16546912  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||| |||||  |||||||||||||||| |||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  16546913 tgcttgctcaataagctttgtttggtggttatcactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 16546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 207
Target Start/End: Complemental strand, 22536276 - 22536103
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||| ||||  |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| || |||||||| ||||||    
T  22536276 tttgttttcttcttccctcccctt--ttatcttgtgattgtgttttgagtttctcacttgtttcctagattagatctaggt-gttttttgttgattgttg 22536180  T
Q  128 cttgcacaatacactttg-tttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatc 207  Q
    |||||   |||||||||| ||||||||||||| |||||| | |||||||||||||||  ||||||||||||||||||||||    
T  22536179 cttgc---atacactttgctttggtggttaccgctctccgtcgctccacacatcatt-ctttgtattggtgtggttcgatc 22536103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 9789209 - 9789042
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||| ||||||||||||  |||||||||||| |||||  ||||||||  ||||| |||||||||||||||||||||| |||||||||| || |||    
T  9789209 tttgttttcctcttccctctcc--gtttatcttgtgcttgtgtattgtgtttttcacttctttcctagattagatctaggtgctgttttgttgatttttg 9789112  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    |||||||   |||||||| ||||||||||| ||| ||||| ||||||||||||| || |||||||||||||||||    
T  9789111 cttgcac---acactttg-ttggtggttactactttcctttgctccacacatca-tactttgtattggtgtggtt 9789042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 18441633 - 18441462
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttca----cacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||| ||||||||||||  |||||||||||| |||||  ||||||||      ||||| |||||||||||||||||||||| |||||||||| ||    
T  18441633 tttgttttcctcttccctctcc--gtttatcttgtgcttgtgtattgtgtttttttttcacttctttcctagattagatctaggtgctgttttgttgatt 18441536  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
     ||||||||||   |||||||| ||||||||||| ||| ||||| |||||||||||| ||| |||||||||||||||||    
T  18441535 attgcttgcac---acactttg-ttggtggttactactttcctttgctccacacatc-ttactttgtattggtgtggtt 18441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 16409658 - 16409824
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||| || ||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  16409658 tttgttttcctcttccctctcctt--ttatcttgtgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattat 16409755  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    |||||||||    ||||||| || |||||||| ||| ||||| ||||||||||||| || ||||||||||||||    
T  16409756 tgcttgcac---ccactttg-ttagtggttactactttcctttgctccacacatca-tactttgtattggtgtg 16409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 26178065 - 26178234
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||| || ||  ||||| | ||||||||||||||||||||| |||| |  ||| || |    
T  26178065 tttgttttcctcttccctctcctt--ttatcttgtgcttgtgttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattat 26178162  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    |||||||||   |||||||| || |||||||| ||| ||||| |||||||||||| ||| || ||||||||||||||    
T  26178163 tgcttgcac---acactttg-ttagtggttactactttcctttgctccacacatc-ttacttcgtattggtgtggtt 26178234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 30182790 - 30182933
Alignment:
Q  53 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttgg 150  Q
    ||||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||| ||||   || ||||||| ||      
T  30182790 tttatcttgtgcttgtgttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttgc---attcactttg-ttat 30182885  T
Q  151 tggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    ||||||| ||| ||||| ||||||||||||| || ||||| ||||||||    
T  30182886 tggttactactttcctttgctccacacatca-tagtttgttttggtgtg 30182933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 1e-86; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 9036594 - 9036801
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036594 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 9036693  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggca 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |  |||| |||||||||||||||||| || ||||||||| |    
T  9036694 gttgcttgcacaa-acactttgtttggtggttaccactctccttagctccacacatca-tcctttgcattggtgtggttcgatctagt-ggggatcggaa 9036790  T
Q  224 ttcacaacagg 234  Q
    |||||||||||    
T  9036791 ttcacaacagg 9036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 44203816 - 44203995
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44203816 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 44203913  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  44203914 cttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 44203995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 24 - 206
Target Start/End: Original strand, 21054136 - 21054314
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgttt 123  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  21054136 tgtatttgttttcttcttccctctcctt--ttatcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgatt 21054233  T
Q  124 gttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat-tattttgtattggtgtggttcgat 206  Q
     ||||||||||   |||||| ||||||||||||||||||||||| |||||||||||||| | | ||||||||||||||||||||    
T  21054234 attgcttgcac---acacttagtttggtggttaccactctcctttgctccacacatcatatttcttgtattggtgtggttcgat 21054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 28 - 206
Target Start/End: Original strand, 9987384 - 9987558
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  9987384 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtatagtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 9987481  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat-tattttgtattggtgtggttcgat 206  Q
    |||||||   |||||||| ||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||    
T  9987482 cttgcac---acactttgattggtggttaccactctcctttgctccacacatcatatttttcgtattggtgtggttcgat 9987558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 40282559 - 40282730
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  40282559 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 40282656  T
Q  128 cttgcacaatacactttg-tttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    ||||||| | |||||||| |||||||||||||||||||||| ||||||||||||| || |||| ||||||||||||    
T  40282657 cttgcac-acacactttgttttggtggttaccactctcctttgctccacacatca-tagtttgcattggtgtggtt 40282730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 20622223 - 20622072
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  20622223 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 20622126  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat 182  Q
    ||||||| | |||||||||||||||||||| ||| ||||| ||||||||||||||    
T  20622125 cttgcac-acacactttgtttggtggttactactttcctttgctccacacatcat 20622072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 51765578 - 51765747
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  51765578 tttgttttcctcttccctctcctt--ttatcttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattat 51765675  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    |||||||||    ||| ||  || |||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  51765676 tgcttgcac---tcac-ttaattagtggttactactttcctttgctccacacatca-tatttcgtattggtgtggtt 51765747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 4e-74; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 28 - 207
Target Start/End: Original strand, 25637610 - 25637793
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgt--gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgt 125  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  25637610 tttgttttcttcttccctctccttgtttatcttgtgattgtttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcc 25637709  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  25637710 tgcttgcacaatacactttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 25637793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 3617634 - 3617813
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3617634 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 3617731  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  3617732 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattcttatttgtattggtgtggttcgatc 3617813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 45283168 - 45283346
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||| || |||    
T  45283168 tttgttttcttcttccctctccttgtttatcttgtgattgtgtattgtgtttctcactagtttcctagattagatctaggtggtgttttgttgattattg 45283267  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatct 208  Q
    ||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||  |||||||||||||||||||||||    
T  45283268 cttgcacaa-acactttgtttggtggttaccgctctccgtcgctccacacatcatt-ctttgtattggtgtggttcgatct 45283346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 54635307 - 54635484
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||    
T  54635307 tttgttttcttcttccctctcctt--ttatcttgtgattgtgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattg 54635404  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatct 208  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||    
T  54635405 cttgcac-acacactttgtttggtggttaccactctcctttgctccacacatcattatttagtattggtgtgactcgatct 54635484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 4598507 - 4598328
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||| |||||| |||    
T  4598507 ttgttttcttcttccctctccttgtttatcttgtgattgttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttattgtttcttg 4598410  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  4598409 cttgctcaataagctttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 4598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 4600728 - 4600549
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgc 128  Q
    ||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||| |||||||||||||||||||||||| | ||    
T  4600728 ttgttttcttcttccctctccttgtttatcttgtgattgttgatt-tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttctggc 4600630  T
Q  129 ttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  4600629 ttgctcaataagctttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 4600549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10211579 - 10211758
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  10211579 ttgttttcatcttccctctccttgtttatcttgtgattgttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttg 10211676  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||  ||||| ||||||||||||||||||| | |||||||||||||||||  | ||||||||||||||||||||    
T  10211677 cttgctcaataagctttgattggtggttaccactctccgtcgctccacacatcattattctctgtattggtgtggttcgatc 10211758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10209359 - 10209538
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  10209359 ttgttttcatcttccctctccttgtttatcttgtgattgttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttg 10209456  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||  ||||| ||||||||||||||||||| |  ||||||||||||||||  | ||||||||||||||||||||    
T  10209457 cttgctcaataagctttgattggtggttaccactctccgtcactccacacatcattattctctgtattggtgtggttcgatc 10209538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10056403 - 10056582
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  10056403 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 10056499  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10056500 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10056582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10058625 - 10058804
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  10058625 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 10058721  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10058722 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10058804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10060847 - 10061026
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  10060847 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 10060943  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10060944 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10061026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10063069 - 10063248
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  10063069 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 10063165  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10063166 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10063248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10065291 - 10065470
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  10065291 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 10065387  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10065388 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10065470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10067490 - 10067669
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  10067490 ttgttttcttcttccctctccttgtttatcttgtgtttagttgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttctt 10067586  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  10067587 gcttgctcaataagcttggtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 10067669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 6716682 - 6716860
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgcttt-gtgtttcacacttgtttcctagattagatctaggtggtgtttt-gttgtttgt 125  Q
    ||||||||||||||||||| ||||  |||||||||||||||  ||| | ||||||||||||||||||||||||||||||||||||||||| |||| || |    
T  6716682 tttgttttcttcttccctcccctt--ttatcttgtgattgtatttttgagtttcacacttgtttcctagattagatctaggtggtgttttggttgattat 6716779  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatct 208  Q
    ||||||||| | ||||||||||||||||||||| || ||| | ||||||||||||| |  |||| ||||||||||||||||||    
T  6716780 tgcttgcac-acacactttgtttggtggttaccgctttccgttgctccacacatcact-ctttgcattggtgtggttcgatct 6716860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 7779990 - 7779821
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttca-cacttgtttcctagattagatctaggtggtg-ttttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| |||||  ||||||||   |||||||||||||||||||||||||||| || |||||||| || |    
T  7779990 tttgttttcctcttccctctcctt--ttatcttgtgcttgtgtattgtgttttttcacttgtttcctagattagatctaggtgctgtttttgttgattat 7779893  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    |||||||||   |||||||| ||||||||||||||||||||| |||||||||||| ||| || ||||||||||||||    
T  7779892 tgcttgcac---acactttg-ttggtggttaccactctcctttgctccacacatc-ttacttcgtattggtgtggtt 7779821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 23200125 - 23199957
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||  ||||||| || ||||| |||||||||  || || ||||||||||||||||||||||| | | |||||| || ||    
T  23200125 tttgttttcttcttccctctcctt--ttatcttatgcttgtggtttgtgtttttcattttgtttcctagattagatctaggtgttttattgttgattatt 23200028  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    ||||||||    ||||||| ||  ||||||| ||| ||||| |||||||| |||| || |||||||||||||||||    
T  23200027 gcttgcac---tcactttg-ttattggttactactttcctttgctccacatatca-tactttgtattggtgtggtt 23199957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 801274 - 801435
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtg-attgtgctttgtgtttcacacttgtttcctagattagatctaggtg--gtgttttgttgtttg 124  Q
    ||||||||||||||||||||||||  |||||||||| |||||| |||     || ||||||||||||||||||||||||||||  || |||||||| ||     
T  801274 tttgttttcttcttccctctcctt--ttatcttgtgtattgtgtttt-----tc-cacttgtttcctagattagatctaggtgctgttttttgttgatta 801365  T
Q  125 ttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    ||||||||||   |||||||  || |||||||| ||| ||||| ||||||||||||| ||||| |||||||||||    
T  801366 ttgcttgcac---acacttt-attagtggttactactttcctttgctccacacatca-tatttcgtattggtgtg 801435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 23197926 - 23197823
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||| ||||| ||||||||  |||||||||| ||||| |||||||||  || || ||||||||||||||||||| ||| | | |||||| || ||    
T  23197926 tttgttttcctcttctctctcctt--ttatcttgtgcttgtggtttgtgtttttcattttgtttcctagattagatctatgtgttttattgttgattatt 23197829  T
Q  127 gcttgc 132  Q
    ||||||    
T  23197828 gcttgc 23197823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 6e-73; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 24 - 207
Target Start/End: Complemental strand, 1560656 - 1560470
Alignment:
Q  24 tgtatttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1560656 tgtatttgttttcttcttccctctccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 1560557  T
Q  123 tgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    | |||||||||||||| ||| |||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  1560556 tcttgcttgcacaatatactctgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 1560470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 6594542 - 6594363
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  6594542 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 6594445  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  6594444 cttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 6594363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 6592324 - 6592145
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  6592324 ttgttttcttcttccctc--cttgtttttcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 6592227  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  6592226 cttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 6592145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 18388744 - 18388565
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18388744 ttgttttcttcttccctctctttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 18388647  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  18388646 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 18388565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 18392180 - 18392001
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18392180 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 18392083  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||  | |||||||||||||||||  ||||||||||||||||||||||    
T  18392082 cttgcacaataaactttgttcggtggttaccactctctgtcgctccacacatcattattctttgtattggtgtggttcgatc 18392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 32060306 - 32060127
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  32060306 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 32060209  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||| ||||||||||||||||||    
T  32060208 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttatattggtgtggttcgatc 32060127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 20344079 - 20344256
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctagg---tggtgttttgttgtttg 124  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||||||   |||| |||||| | |||    
T  20344079 tttgttttcttcttccctctcctt--ttatcttgtgattgtgttttgtgtttctcacttgtttcctagattagatctaggtgctggttttttgtcgattg 20344176  T
Q  125 ttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatct 208  Q
    ||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  20344177 ttgcttgcac---acactttgtttggtggttaccactctcctttgctccacacatcatt-ctttgcattggtgtggttcgatct 20344256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 43504140 - 43503975
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||| || ||  ||||| | |||||||||||||||||| || |  ||||||| || ||    
T  43504140 tttgttttcctcttccctctcctt--ttatcttgtgcttgtgttttatgcttttcactttgattcctagattagatctagctgtt--tttgttgattatt 43504045  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    |||||||||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  43504044 gcttgcacac-acactttgtt-ggtggttaccactctcctttgctccacacatca-tatttcgtattggtgtg 43503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 24790230 - 24790349
Alignment:
Q  76 gtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccac 175  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| || || |||||||    ||||||||||||||||||||||| ||| | |||||||    
T  24790230 gtttctcacctgtttcctagattagatctaggtggtgttttgttgattattacttgcac---gcactttgtttggtggttaccactttccgttgctccac 24790326  T
Q  176 acatcattattttgtattggtgtg 199  Q
    |||||| || |||| |||||||||    
T  24790327 acatca-tactttgcattggtgtg 24790349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 39731550 - 39731656
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  39731550 tttgttttcctcttccctctcctt--ttatcttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattat 39731647  T
Q  126 tgcttgcac 134  Q
    |||||||||    
T  39731648 tgcttgcac 39731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 24790028 - 24790074
Alignment:
Q  32 ttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttc 80  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  24790028 ttttcttcttccctctcctt--ttatcttgtgattgtgcattgtgtttc 24790074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 13656015 - 13655834
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13656015 ttgttttcttcttccctctccttgtttatcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 13655916  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| ||| |||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  13655915 cttgcacaatatactctgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 12647370 - 12647191
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12647370 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 12647273  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  12647272 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 12647191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 6266874 - 6267023
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||  |||||||||||| |||||  ||||||||  ||||| |||||||||||||||||||||| |||||||||| || |||    
T  6266874 tttgttttcttcttccctctcc--gtttatcttgtgcttgtgtattgtgtttttcacttctttcctagattagatctaggtgttgttttgttgatttttg 6266971  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcat 182  Q
    ||| |||   |||||||||||||||||||||||||||||| ||||||||||||||    
T  6266972 cttacac---acactttgtttggtggttaccactctcctttgctccacacatcat 6267023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 32289748 - 32289916
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgtt 126  Q
    |||||||| ||||||||||||||  |||||||||| ||||| ||| || ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||    
T  32289748 ttgttttcctcttccctctcctt--ttatcttgtgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattatt 32289845  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    ||||||||    ||||||| || |||||||| ||| ||||| |||||||||||| ||| |||||||||||||||||    
T  32289846 gcttgcac---ccactttg-ttagtggttactactttcctttgctccacacatc-ttactttgtattggtgtggtt 32289916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 4484317 - 4484151
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||||||||||||||||||  |||||||||| ||||| ||| || ||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  4484317 tttgttttcttcttccctctcctt--ttatcttgtgcttgtggtttttgcttttcactttgtttcctagattagatctaggtgttgttattgttgattat 4484220  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    |||||||||    ||||||| ||  ||||||| ||| ||||| ||||||||||||| ||||| |||||||||||    
T  4484219 tgcttgcac---tcactttg-ttattggttactactttcctttgctccacacatca-tatttcgtattggtgtg 4484151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 30833527 - 30833633
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  30833527 tttgttttcctcttccctctcctt--ttatcttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattat 30833624  T
Q  126 tgcttgcac 134  Q
    |||||||||    
T  30833625 tgcttgcac 30833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 4503099 - 4503017
Alignment:
Q  53 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgca 133  Q
    ||||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |||||||||    
T  4503099 tttatcttgtgcttgtgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgca 4503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 2588 - 2409
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2588 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 2491  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  2490 cttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 128; Significance: 8e-66; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 6456 - 6638
Alignment:
Q  29 ttgttttcttcttccctctccttgttt-atcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||    
T  6456 ttgttttcttcttccctctccttgttttatcttgtgattgttgctttgtgtttcacacttgtttcctagattggatctaggtggtgtattgttgtttctt 6555  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||||||    
T  6556 gcttgcacaataaactttgtttggtggttaccactctccgtcgctccacatatcattattctttgtattggtgtggttcgatc 6638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 8e-66; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 7122867 - 7123046
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  7122867 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 7122964  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  7122965 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 7123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 8395787 - 8395967
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  8395787 ttgttttcttcttccctctccat-tgtatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgttttttg 8395885  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  8395886 cttgcacaataaactttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 8395967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 7125086 - 7125265
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  7125086 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 7125183  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||| ||||||||||||||||||    
T  7125184 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttatattggtgtggttcgatc 7125265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 8393578 - 8393758
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  8393578 ttgttttcttcttccctctccat-tgtatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 8393676  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  8393677 cttgcacaataaacttcgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 8393758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 5136249 - 5136429
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgtgctt--tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| || || ||  | ||||||||||||| |||||||||||||||||| || ||||||||||| | ||    
T  5136249 ttgttttcttcttccctctccttgtttatcttgtgttt-tggttgctttgtttcacacttggttcctagattagatctag-tgatgttttgttgtctctt 5136346  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  5136347 gcttgctcaataagctttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 5136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 5138474 - 5138654
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgtgctt--tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    ||||||||||||||||||||||||||||||||||| || || ||  | ||||||||||||| |||||||||||||||||| || ||||||||||| | ||    
T  5138474 ttgttttcttcttccctctccttgtttatcttgtgttt-tggttgctttgtttcacacttggttcctagattagatctag-tgatgttttgttgtctctt 5138571  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  5138572 gcttgctcaataagctttgtttggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 5138654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 31495271 - 31495130
Alignment:
Q  53 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggt 151  Q
    ||||||||||| ||||| ||| || ||  ||||| ||||||||||||||||||||||| |||||||||| || |||||||||| | |||||||| ||| |    
T  31495271 tttatcttgtgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgctgttttgttgattattgcttgcac-acacactttg-ttgat 31495174  T
Q  152 ggttaccactctccttggctccacacatcattattttgtattggt 196  Q
    |||||| ||| ||||| ||||||||||||| ||||| ||||||||    
T  31495173 ggttactactttcctttgctccacacatca-tatttcgtattggt 31495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 120; Significance: 5e-61; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 49 - 205
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 146  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattatt 186  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||    
T  147 cttgcacaataaactttgttaggtggttaccactctccgtcgctccacacatcattatt 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 120; Significance: 5e-61; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 3710 - 3554
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3710 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 3613  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattatt 186  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||    
T  3612 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattatt 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 25690139 - 25690316
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgc 128  Q
    |||||||||||||||||| ||||  ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||    
T  25690139 ttgttttcttcttccctcccctt--ttatcttgtgagtgtgttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattcttgc 25690236  T
Q  129 ttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggttcgatcttg 210  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  25690237 ttgcac-acacactttgtttggtggttaccactctcctttgctccacacatcatt-ctttgtattggtgtggttcgatcttg 25690316  T

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Target: chr8; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 3439686 - 3439862
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  3439686 tttgttttcttcttccctctcctt--ttatcttgtgattgtgttttgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattgttg 3439783  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattatttt-gtattggtgtggttcgatct 208  Q
    |||||||   ||||||||||||||||||||| |||||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  3439784 cttgcac---acactttgtttggtggttaccgctctccgtcgctccacacatcatttttttagtattggtgtggttcgatct 3439862  T

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Target: chr8; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 15290708 - 15290887
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||    
T  15290708 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttg 15290805  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||  ||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  15290806 cttgctcaataagctttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 15290887  T

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Target: chr8; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 15471077 - 15471256
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 127  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||    
T  15471077 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttg 15471174  T
Q  128 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    ||||| |||||  ||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  15471175 cttgctcaataagctttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 15471256  T

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Target: chr8; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 42575308 - 42575130
Alignment:
Q  29 ttgttttcttcttccctctccttgtttatcttgtgattg--tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgtt 126  Q
    |||||||||||||||||||||||||  |||||||| |||  ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  42575308 ttgttttcttcttccctctccttgt--atcttgtgtttggttgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttctt 42575213  T
Q  127 gcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 207  Q
    |||||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  42575212 gcttgctcaataagctttgtttggtggttaccactctccgtcgctccacacatcattatagtttgtattggtgtggttcgatc 42575130  T

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Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 2627918 - 2628087
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacacttgtttcctagattagatctaggtggtgtt-ttgttg-tttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| ||| || ||  |||||||||||||||||||||||||||| |||| |||||| ||| |    
T  2627918 tttgttttcctcttccctctcctt--ttatcttgtgcttgtgttttatgcttttcacttgtttcctagattagatctaggtgttgttattgttgattttt 2628015  T
Q  126 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 202  Q
    |||||||||    ||||||| || |||||||| ||| ||||| |||||||||||| ||| |||||||||||||||||    
T  2628016 tgcttgcac---ccactttg-ttagtggttactactttcctttgctccacacatc-ttactttgtattggtgtggtt 2628087  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 31218459 - 31218541
Alignment:
Q  53 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgca 133  Q
    ||||||||||| || || |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |||||||||    
T  31218459 tttatcttgtgcttatgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgca 31218541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 3303541 - 3303494
Alignment:
Q  151 tggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    ||||||||||| ||||| ||||||||||||| || ||||||||||||||    
T  3303541 tggttaccactttcctttgctccacacatca-tagtttgtattggtgtg 3303494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 43036720 - 43036767
Alignment:
Q  151 tggttaccactctccttggctccacacatcattattttgtattggtgtg 199  Q
    ||||||| ||| ||||| ||||||||||||||| |||||||||||||||    
T  43036720 tggttactactttcctttgctccacacatcatt-ttttgtattggtgtg 43036767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 11148 - 11042
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| ||||||||||||||  |||||||||| ||||| |||||||||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  11148 tttgttttcctcttccctctcctt--ttatcttgtgcttgtggtttgtgtttttcactttgtttcctagattagatctaggtgttgttattgttgattat 11051  T
Q  126 tgcttgcac 134  Q
    |||||||||    
T  11050 tgcttgcac 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 8722 - 8616
Alignment:
Q  28 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgt 125  Q
    ||||||||| |||||||||| |||  |||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |    
T  8722 tttgttttcctcttccctcttctt--ttatcttgtgcttgtggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattat 8625  T
Q  126 tgcttgcac 134  Q
    |||||||||    
T  8624 tgcttgcac 8616  T

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Target: scaffold0286 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 11804 - 11911
Alignment:
Q  89 ttcctagattag-atctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattatt 186  Q
    |||||||||||| ||||||||| |||| |||||| || |||||||||||   ||||||||| | ||||||| ||| ||||| ||||||||||||| || |    
T  11804 ttcctagattagtatctaggtgctgttattgttgattattgcttgcaca---cactttgttag-tggttactactttcctttgctccacacatca-tagt 11898  T
Q  187 ttgtattggtgtg 199  Q
    | |||||||||||    
T  11899 tcgtattggtgtg 11911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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