View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21283_high_1 (Length: 714)
Name: NF21283_high_1
Description: NF21283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21283_high_1 |
 | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0295 (1 HSPs) |
| | |
|
| [»] scaffold0807 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 638; Significance: 0; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 638; E-Value: 0
Query Start/End: Original strand, 18 - 700
Target Start/End: Original strand, 1533551 - 1534237
Alignment:
| Q |
18 |
caaccgtctccgattctatctctctgtagaagatcatcacacactccctctcctccatcgtctcttccataggttcaccaatatcaccatccttgacctc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1533551 |
caaccgtctccgattctatctctctgtagaagatcatcacacactccctctcctccatcgtctcttccataggttcaccaatatcaccatccttgacctc |
1533650 |
T |
|
| Q |
118 |
tcatcctacaatggtaacctcgatgcacttctctgtaaaatctctctttttccattgaaaatcacatcccttgatttatctgaccaacccacgattcccg |
217 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1533651 |
tcatcctacaatggtaacctcaatgcacttctctgtaaaatctctctttttccattgaaaatcacatcccttgatttatctgaccaacccacgattcccg |
1533750 |
T |
|
| Q |
218 |
ctaaaggcttgcgttatttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatcgc |
317 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1533751 |
ctaaaggcttgcgatatttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatggc |
1533850 |
T |
|
| Q |
318 |
ggattgtttccccaacttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgaca |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1533851 |
ggattgtttccccaacttggaggatcttgctttgaatgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgaca |
1533950 |
T |
|
| Q |
418 |
catttgaacttagaaggctgttctgatttgaaaatgacgataaactttgaagttcctaaactcaaggttttggaattgtcaagcaaaagagttaacgacg |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
1533951 |
catttgaacttagaaggctgttctgatttgaaaatgacgataaactttgaagttcctaaactcaaggtgttggaattgtcaagcacaagagttaacgacg |
1534050 |
T |
|
| Q |
518 |
acgcactctttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatg----atgtcacagagaagggagttaagcatgtgg |
613 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1534051 |
acgcactctttgtaatctcgaagacttgtcgtggaattttgcaactatcactgaacgattgtgatgatgcatgtcacagagaagggagttaagcatgtgg |
1534150 |
T |
|
| Q |
614 |
tagagaactgttcacaactacaagagatcgatttgatatattgttgtaatgtgaaaagtgatgttcttgcctcattgatattgtcaa |
700 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1534151 |
tagagaactgtgcacaactacaagagatcgatttgatatattgttgtaatgtgaaaagtgatgttcttgcctcattgatattgtcaa |
1534237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 12 - 700
Target Start/End: Original strand, 1495480 - 1496165
Alignment:
| Q |
12 |
catcatcaaccgtctccgattctatctctctgtagaagatcatcacacactccctctcctccatcgtctcttccataggttcaccaatatcaccatcctt |
111 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||||||||| |
|
|
| T |
1495480 |
catcaccaaccgtctccgatgctatctttctgtagaagatcatcacacaccccctctcctccgtcgtctcttcgaaaggttcacca---tcaccatcctt |
1495576 |
T |
|
| Q |
112 |
gacctctcatcctacaatggtaacctcgatgcacttctctgtaaaatctctctttttccattgaaaatcacatcccttgatttatctgaccaacccacga |
211 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1495577 |
gacctctcatcctacgatggtaaccttgatacacttctctgtgaaatctctctttttccattgaaaatcacatcccttgatttatctgaccaacccacga |
1495676 |
T |
|
| Q |
212 |
ttcccgctaaaggcttgcgttatttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcct |
311 |
Q |
| |
|
|||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||| ||||||||||| || |||| |
|
|
| T |
1495677 |
ttcctgctataggattgcgatatttctcccaaaaaattacaactttaacctctctaacatgtactagcattcatgcgatccattacactgacttggtcct |
1495776 |
T |
|
| Q |
312 |
catcgcggattgtttccccaacttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaag |
411 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1495777 |
catcgcggattgtttccccaacttggagcatcttgctttgaatgattgcgatgacatatctgaagaaggtattggtcatgttttaaggagatgttgtaag |
1495876 |
T |
|
| Q |
412 |
atgacacatttgaacttagaaggctgttctgatttgaaaatgacgataaactttgaagttcctaaactcaaggttttggaattgtcaagcaaaagagtta |
511 |
Q |
| |
|
|||||||||||| ||||||| || |||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||| | || ||||| |
|
|
| T |
1495877 |
atgacacatttggacttagacggatgttctaatttgaaaatgacgatacactttgaagttcctaacctcaaggtgttggatttgtcaatgacaaaagtta |
1495976 |
T |
|
| Q |
512 |
acgacgacgcactctttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgt |
611 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||||||||||| || |||| | ||||| ||||| |||||||||||||||||| |||||| |
|
|
| T |
1495977 |
acgatgacgcactctttgtaatctcaaagaattgtcgtggaattttgcaacaattactggaaaattgtcatgatatcacagagaagggagttaggcatgt |
1496076 |
T |
|
| Q |
612 |
ggtagagaactgttcacaactacaagagatcgatttgatatattgttgtaatgtgaaaagtgatgttcttgcctcattgatattgtcaa |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||| | |||| |||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
1496077 |
ggtagagaactgtgcacaactacaagagatcaatttgcgaaattgcagtaatgtgaacagtgatgttcttgtctcattgatattgtcaa |
1496165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 12 - 700
Target Start/End: Original strand, 1517057 - 1517745
Alignment:
| Q |
12 |
catcatcaaccgtctccgattctatctctctgtagaagatcatcacacactccctctcctccatcgtctcttccataggttcaccaatatcaccatcctt |
111 |
Q |
| |
|
||||| |||||||||||||| || |||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||| |
|
|
| T |
1517057 |
catcaccaaccgtctccgatgttacctctctgtagaaaatcaccacacaccccctctcctccgtcgtctcttccataggttcacca---tcaccgacctt |
1517153 |
T |
|
| Q |
112 |
gacctctcatcctacaatggtaacctcgatgcacttctctgtaaaatctctctttttccattgaaaatcacatcccttgatttatctgaccaacccacga |
211 |
Q |
| |
|
|||||||| |||||||||||||||||| | | |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1517154 |
gacctctcttcctacaatggtaacctcaacgtgcttctccgtaaaatctctcattttccattgaaaatcacatcccttgatttatctgaccaacccatga |
1517253 |
T |
|
| Q |
212 |
ttcccgctaaaggcttgcgttatttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcct |
311 |
Q |
| |
|
||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||| | |||| |||||||| ||||||||| ||||||| |
|
|
| T |
1517254 |
ttcccactaaaggcttgcaatgtttctcccaaaaaattacaactttaacctccctaacatgttttagcattcatgcaatccattacactgcattgatcct |
1517353 |
T |
|
| Q |
312 |
catcgcggattgtttccccaacttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaag |
411 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1517354 |
catcgtggattgtttccccaacttggagcatcttgctttgaatgattgcgatgacatatctgaagaaggtatcgatcatgttttaaggagatgttgtaag |
1517453 |
T |
|
| Q |
412 |
atgacacatttgaacttagaaggctgttctgatttgaaaatgacgataaactttgaagttcctaaactcaaggttttggaattgtcaagcaaaagagtta |
511 |
Q |
| |
|
|||||||||||| ||||| || |||||| |||||||||||| |||| ||||||||||||| |||||||||| ||| | ||||||| | |||||||| |
|
|
| T |
1517454 |
atgacacatttggacttatttggatgttctaatttgaaaatgatgatactctttgaagttcctcaactcaaggtgttgaatttgtcaatgacaagagtta |
1517553 |
T |
|
| Q |
512 |
acgacgacgcactctttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgt |
611 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||||||| |||||| |||| | ||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
1517554 |
acgatgacgcactctttgtaatctcaaagaattgtcgtggaattttgaaactattactggaaaattgtcatgatgtcacagagaagggagttaggcatgt |
1517653 |
T |
|
| Q |
612 |
ggtagagaactgttcacaactacaagagatcgatttgatatattgttg---taatgtgaaaagtgatgttcttgcctcattgatattgtcaa |
700 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| |||||| | ||||| | || |||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
1517654 |
ggtagagaactgtgcacaactacaaaagatcaatttgagaaattgtagtattattgtgaacagtgatgttcttgtctcattgatattgtcaa |
1517745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 585 - 700
Target Start/End: Original strand, 12121588 - 12121703
Alignment:
| Q |
585 |
tgtcacagagaagggagttaagcatgtggtagagaactgttcacaactacaagagatcgatttgatatattgttgtaatgtgaaaagtgatgttcttgcc |
684 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| || || |||||||| |||||||||||||| ||||||| | | ||| | |||||||||||||| |
|
|
| T |
12121588 |
tgtcacagagatgggagtgaagcatgtggtagaaaaatgcacacaactaagagagatcgatttgaaatattgtcttcaagtgcattgtgatgttcttgcc |
12121687 |
T |
|
| Q |
685 |
tcattgatattgtcaa |
700 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
12121688 |
tcattgatattttcaa |
12121703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 585 - 700
Target Start/End: Original strand, 1513535 - 1513650
Alignment:
| Q |
585 |
tgtcacagagaagggagttaagcatgtggtagagaactgttcacaactacaagagatcgatttgatatattgttgtaatgtgaaaagtgatgttcttgcc |
684 |
Q |
| |
|
||||||||||| |||||| |||| |||| |||| || || ||||||| ||||||| |||||| |||||||| ||| ||||| |||||||||||||| |
|
|
| T |
1513535 |
tgtcacagagatgggagtgaagcttgtgctagaaaaatgcacacaactgagagagatcaatttgaaatattgttctaaagtgaatggtgatgttcttgcc |
1513634 |
T |
|
| Q |
685 |
tcattgatattgtcaa |
700 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
1513635 |
tcattgatattttcaa |
1513650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 365 - 430
Target Start/End: Original strand, 3438474 - 3438539
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||||||||| |||||| ||| ||| ||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
3438474 |
acatatctgacgaaggtgttattcaagttttaaggagatgttgtaagattagacatttgaacttag |
3438539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 430
Target Start/End: Original strand, 8186977 - 8187064
Alignment:
| Q |
343 |
cttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||| ||||||| ||||| ||||||||||||||||||||||| |||| ||||| | |||||||||| |||| | |||||||||||| |
|
|
| T |
8186977 |
cttgatttgagtcattgctatgacatatctgaagaaggtatttgtcaagttttgaagagatgttgtgagattagggatttgaacttag |
8187064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 429
Target Start/End: Complemental strand, 553832 - 553606
Alignment:
| Q |
203 |
aacccacgattcccgctaaaggcttgcgttatttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactga |
302 |
Q |
| |
|
||||||| |||||||| || || ||||| |||||||||||| ||||||||||| |||||||| || ||||| | | | | | ||| ||||| |||| |
|
|
| T |
553832 |
aacccaccattcccgcaaatgggttgcgagctttctcccaaaacattacaactttgacctctctcacctgttcctttactaaatctatcaattactctga |
553733 |
T |
|
| Q |
303 |
cctgatcctcatcgcggattgtttccccaacttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggaga |
402 |
Q |
| |
|
| || ||||||| | |||||||||||||| ||| || |||| |||||| ||| | | || |||||||||||| | || |||||||||||||| | |
|
|
| T |
553732 |
cttgttcctcatggtagattgtttccccaatttgcagatgcttgatttgagatattcctacgatgtatctgaagaagctgttgttcatgttttaaggaca |
553633 |
T |
|
| Q |
403 |
tgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
|||||||| || | ||||||||||||| |
|
|
| T |
553632 |
tgttgtaacattagacatttgaactta |
553606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 425
Target Start/End: Complemental strand, 645143 - 644961
Alignment:
| Q |
241 |
caaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatcgcggattgtttccccaacttggagg |
340 |
Q |
| |
|
||||| |||| ||||||||||||||| |||||||| | |||||| | ||| || ||| ||||| ||||||| || ||||||||||| || || || |
|
|
| T |
645143 |
caaaacattaaaactttaacctctctcacatgttccttcattgaatctatcaatcgcaccgacct--tcctcattgctgattgtttcccaaatttacagc |
645046 |
T |
|
| Q |
341 |
atcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaa |
425 |
Q |
| |
|
||||| |||||| ||||| | ||| |||||||||||||||| ||||||||||| || ||||||||| || | ||||||||| |
|
|
| T |
645045 |
ttcttgatttgagccattgcaaagacgtatctgaagaaggtatggttcatgttttaatgatatgttgtaacattagacatttgaa |
644961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 430
Target Start/End: Complemental strand, 1600610 - 1600545
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||| || ||| || | |||||||||||||| |
|
|
| T |
1600610 |
acatatctgaagaaggtatttgtcaagttttaaggagattttctaaaattagacatttgaacttag |
1600545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 633
Target Start/End: Original strand, 53761848 - 53761948
Alignment:
| Q |
532 |
atctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtagagaactgttcacaac |
631 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||| |||||| |||||||| ||||||| || |||||||| || ||||||| ||| ||||| |||||| |
|
|
| T |
53761848 |
atctcgaagaattgtcgtgggcttttgcaa-tattactgaaacattgtgataatgtcacggacaagggagtgaaacatgtggaagaaaactgcacacaac |
53761946 |
T |
|
| Q |
632 |
ta |
633 |
Q |
| |
|
|| |
|
|
| T |
53761947 |
ta |
53761948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 429
Target Start/End: Complemental strand, 547104 - 547040
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
547104 |
acatatctgaagacagtatttgtgatgttttaaggagatgttgtaagataaggcatttgaactta |
547040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 566375 - 566316
Alignment:
| Q |
370 |
tctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
||||| ||||| |||| |||||||||||||| ||||||||| || ||||||||||||||| |
|
|
| T |
566375 |
tctgacgaagggattactcatgttttaaggatatgttgtaacattacacatttgaactta |
566316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 430
Target Start/End: Original strand, 55908636 - 55908701
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||||||||||||||||||| || | ||| ||||||||||||||||| | | ||||||||| |||| |
|
|
| T |
55908636 |
acatatctgaagaaggtatttgtgaagttctaaggagatgttgtaaggttagacatttgaatttag |
55908701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 266
Target Start/End: Complemental strand, 661980 - 661868
Alignment:
| Q |
154 |
aaaatctctctttttccattgaaaatcacatcccttgatttatctgaccaacccacgattcccgctaaaggcttgcgttatttctcccaaaaaattacaa |
253 |
Q |
| |
|
|||||||||| || ||| ||||||||||| || || || | || ||||| |||| ||||||||||| || ||||| |||||||||| | ||||||| |
|
|
| T |
661980 |
aaaatctctcgttctccgttgaaaatcacgtcactcaatctctccaaccaaaccaccattcccgctaatggtttgcgagctttctcccaatatattacaa |
661881 |
T |
|
| Q |
254 |
ctttaacctctct |
266 |
Q |
| |
|
||||||||||||| |
|
|
| T |
661880 |
ctttaacctctct |
661868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 700
Target Start/End: Original strand, 1489491 - 1489607
Alignment:
| Q |
584 |
atgtcacagagaagggagttaagcatgtggtagagaactgttcacaactacaagagatcgatttgatatattgttgtaatgtgaaaagtgatgttcttgc |
683 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||| || || |||||||| ||||||| |||||| | ||| || | ||| | |||||||||||| |
|
|
| T |
1489491 |
atgtcacagagaagggagtgaagcatgtgctagaaaaatgcgcacaactaagagagatcaatttgaaaatgtgtggtcaagtgcatgatgatgttcttgc |
1489590 |
T |
|
| Q |
684 |
ctcattgatattgtcaa |
700 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
1489591 |
ctcattgatattttcaa |
1489607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 430
Target Start/End: Original strand, 8183916 - 8184003
Alignment:
| Q |
343 |
cttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||| ||||||| ||||| |||||| |||||| ||||||||| ||| |||||||||| |||||| |||| | | |||||||||||| |
|
|
| T |
8183916 |
cttgatttgagtcattgctttgacatttctgaaaaaggtattactcaaattttaaggagttgttgtgagattagagatttgaacttag |
8184003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 410
Target Start/End: Original strand, 1524397 - 1524439
Alignment:
| Q |
368 |
tatctgaagaaggtattagtcatgttttaaggagatgttgtaa |
410 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
1524397 |
tatctgaagaaggtattcttcaggttttaaggagatgttgtaa |
1524439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 705
Target Start/End: Original strand, 1530065 - 1530111
Alignment:
| Q |
659 |
gtaatgtgaaaagtgatgttcttgcctcattgatattgtcaatgatg |
705 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||| |||| |
|
|
| T |
1530065 |
gtaatgtgaacagtgatgttcttgcctcattgatcatgtcaaggatg |
1530111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 7225798 - 7225855
Alignment:
| Q |
372 |
tgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
||||||||| || |||| |||||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
7225798 |
tgaagaaggggtttgtcaagttttacggagatgttgtaagattagacatttgaactta |
7225855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 430
Target Start/End: Original strand, 53761692 - 53761745
Alignment:
| Q |
377 |
aaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| || | ||||||||||||| |
|
|
| T |
53761692 |
aaggtatttgtcaagttttaaggagatgttgtaacattaggcatttgaacttag |
53761745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 234 - 425
Target Start/End: Complemental strand, 1657569 - 1657378
Alignment:
| Q |
234 |
tttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatcgcggattgtttccccaac |
333 |
Q |
| |
|
|||||| ||||| |||| ||||||||||||||| || ||||| | |||||| | ||| || |||||||||| ||||||| || ||||||||||| || |
|
|
| T |
1657569 |
tttctctcaaaacattaaaactttaacctctctcacgtgttccttcattgaatctatcaatcgcactgacctgttcctcattgctgattgtttcccaaat |
1657470 |
T |
|
| Q |
334 |
ttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaa |
425 |
Q |
| |
|
|| || |||| |||||| ||||| | ||||||||||||||||||||| ||||||||||| || ||||||||| || | ||||||||| |
|
|
| T |
1657469 |
ttacagctacttgatttgagccattgcaaagacatatctgaagaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaa |
1657378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 521 - 617
Target Start/End: Original strand, 51113848 - 51113944
Alignment:
| Q |
521 |
cactctttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtaga |
617 |
Q |
| |
|
|||||| ||| |||||||||| |||| |||| |||||||||| | |||||| ||||| | ||||||||||||||||||| |||||||||||||| |
|
|
| T |
51113848 |
cactctatgtgatctcgaagagttgttgtgggcttttgcaactgttactgaaaaattgttaccatgtcacagagaagggagtgaagcatgtggtaga |
51113944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 430
Target Start/End: Original strand, 13470652 - 13470705
Alignment:
| Q |
377 |
aaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||||||| |||| |||||||||| |||||||||||| | ||||||||||||| |
|
|
| T |
13470652 |
aaggtatttgtcaagttttaaggatatgttgtaagattaggcatttgaacttag |
13470705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 234 - 425
Target Start/End: Original strand, 11936052 - 11936243
Alignment:
| Q |
234 |
tttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatcgcggattgtttccccaac |
333 |
Q |
| |
|
|||||| ||||| |||| || |||||||||||| || ||||| | |||||| | ||| || |||||||||| ||||||| || ||||||||||| || |
|
|
| T |
11936052 |
tttctctcaaaacattaaaaatttaacctctctcacgtgttccttcattgaatctatcaatcgcactgacctgttcctcattgctgattgtttcccaaat |
11936151 |
T |
|
| Q |
334 |
ttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaa |
425 |
Q |
| |
|
|| || |||| |||||| ||||| | || ||||||||||||||||| ||||||||||| || ||||||||| || | ||||||||| |
|
|
| T |
11936152 |
ttatagctacttgatttgagccattgcaaagatgtatctgaagaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaa |
11936243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 234 - 425
Target Start/End: Original strand, 11948032 - 11948223
Alignment:
| Q |
234 |
tttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatcgcggattgtttccccaac |
333 |
Q |
| |
|
|||||| ||||| |||| || |||||||||||| || ||||| | |||||| | ||| || |||||||||| ||||||| || ||||||||||| || |
|
|
| T |
11948032 |
tttctctcaaaacattaaaaatttaacctctctcacgtgttccttcattgaatctatcaatcgcactgacctgttcctcattgctgattgtttcccaaat |
11948131 |
T |
|
| Q |
334 |
ttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaa |
425 |
Q |
| |
|
|| || |||| |||||| ||||| | || ||||||||||||||||| ||||||||||| || ||||||||| || | ||||||||| |
|
|
| T |
11948132 |
ttatagctacttgatttgagccattgcaaagatgtatctgaagaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaa |
11948223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 7119337 - 7119283
Alignment:
| Q |
376 |
gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
7119337 |
gaaggtatttgtcaagttttaaggagatgttctaagattaaacatttgaacttag |
7119283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 7131815 - 7131761
Alignment:
| Q |
376 |
gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
7131815 |
gaaggtatttgtcaagttttaaggagatgttctaagattaaacatttgaacttag |
7131761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 6594525 - 6594578
Alignment:
| Q |
376 |
gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||||| ||||||||| ||||| |
|
|
| T |
6594525 |
gaaggtatttgtcaagttttaaggagatgttataagattacacatttgtactta |
6594578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 623
Target Start/End: Complemental strand, 19632466 - 19632369
Alignment:
| Q |
526 |
tttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtagagaactg |
623 |
Q |
| |
|
||||| ||||| ||||||||| |||| |||||||||| | |||||| |||||| | || |||||||||||||||| || || |||||||| ||||| |
|
|
| T |
19632466 |
tttgtgatctcaaagaattgttgtgggcttttgcaactcttactgaaaaattgtgctaatatcacagagaagggagtgaaacacgtggtagaaaactg |
19632369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 8913904 - 8913955
Alignment:
| Q |
377 |
aaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactt |
428 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
8913904 |
aaggtatttgtcaagttttaagaagatgttgtaagattaaacatttgaactt |
8913955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 6432341 - 6432287
Alignment:
| Q |
376 |
gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
6432341 |
gaaggtatttgtcaagttttaaggagatgttgtaaacttaaacatttgaacttag |
6432287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 6403040 - 6402987
Alignment:
| Q |
376 |
gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| || | |||||||||||| |
|
|
| T |
6403040 |
gaaggtatttgtcaagttttaaggagatgttgtaacattaggcatttgaactta |
6402987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 430
Target Start/End: Original strand, 1037572 - 1037637
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||||||||||||| | | ||||||||| |||| |
|
|
| T |
1037572 |
acatatctgaagaaggtatttgtgaagttttaaggagatgttgtaaggttagacatttgaatttag |
1037637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 617
Target Start/End: Original strand, 45245163 - 45245248
Alignment:
| Q |
532 |
atctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtaga |
617 |
Q |
| |
|
||||| |||| ||||||||| |||||||||||| | |||| | ||| || |||||||||| |||||||| || ||||||||||| |
|
|
| T |
45245163 |
atctcaaagagttgtcgtgggcttttgcaactattattgaaaaaatgttatcatgtcacagataagggagtgaaacatgtggtaga |
45245248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 624
Target Start/End: Original strand, 41901613 - 41901705
Alignment:
| Q |
532 |
atctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtagagaactgt |
624 |
Q |
| |
|
||||| |||| |||| ||||| ||||| || | ||||| | |||||| ||||||||||| |||||||||| |||||||||||||| |||||| |
|
|
| T |
41901613 |
atctcaaagagttgttgtggacttttgaaattgtcacttcaagattgtaatgatgtcacaaagaagggagtgaagcatgtggtagaaaactgt |
41901705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 521 - 632
Target Start/End: Original strand, 10170148 - 10170259
Alignment:
| Q |
521 |
cactctttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtagagaa |
620 |
Q |
| |
|
|||||| ||| ||||| ||| ||||| ||||| ||||| |||||| ||||| ||||| |||||||||||||||| ||||| || |||||| ||| || |
|
|
| T |
10170148 |
cactctatgtgatctcaaagtattgttgtggacttttgaaactatttgtgaacaattgtaatgatgtcacagagaaaggagtgaaacatgtgaaagaaaa |
10170247 |
T |
|
| Q |
621 |
ctgttcacaact |
632 |
Q |
| |
|
||| |||||||| |
|
|
| T |
10170248 |
ctgctcacaact |
10170259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 521 - 632
Target Start/End: Original strand, 10177673 - 10177784
Alignment:
| Q |
521 |
cactctttgtaatctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtagagaa |
620 |
Q |
| |
|
|||||| ||| ||||| ||| ||||| ||||| ||||| |||||| ||||| ||||| |||||||||||||||| ||||| || |||||| ||| || |
|
|
| T |
10177673 |
cactctatgtgatctcaaagtattgttgtggacttttgaaactatttgtgaacaattgtaatgatgtcacagagaaaggagtgaaacatgtgaaagaaaa |
10177772 |
T |
|
| Q |
621 |
ctgttcacaact |
632 |
Q |
| |
|
||| |||||||| |
|
|
| T |
10177773 |
ctgctcacaact |
10177784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 7977764 - 7977724
Alignment:
| Q |
370 |
tctgaagaaggtattagtcatgttttaaggagatgttgtaa |
410 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
7977764 |
tctgaagaaggtattggtcaagttttaaggagatgttgtaa |
7977724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 10614773 - 10614719
Alignment:
| Q |
376 |
gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
||||||||| |||| |||||||||| |||||||||||| | ||||||||||||| |
|
|
| T |
10614773 |
gaaggtatttgtcaagttttaaggatatgttgtaagattaggcatttgaacttag |
10614719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 623
Target Start/End: Complemental strand, 7554509 - 7554418
Alignment:
| Q |
532 |
atctcgaagaattgtcgtggaattttgcaactatcactgaacgattgtgatgatgtcacagagaagggagttaagcatgtggtagagaactg |
623 |
Q |
| |
|
||||| |||| |||| ||||| |||| ||||| | |||||| | |||||| |||||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
7554509 |
atctcaaagagttgtggtggacttttacaactgttactgaaaggatgtgataatgtcacagaaaagggagtgaagcatgtggtagaaaactg |
7554418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 429
Target Start/End: Complemental strand, 44736668 - 44736604
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||| ||||| ||| || |||||||| |||||| |
|
|
| T |
44736668 |
acatatttgaagaaggtatttctcatgttttaaggacatgttctaacataacacattttaactta |
44736604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 425
Target Start/End: Original strand, 28246072 - 28246263
Alignment:
| Q |
234 |
tttctcccaaaaaattacaactttaacctctctaacatgttcttacattgatgcaatcgattacactgacctgatcctcatcgcggattgtttccccaac |
333 |
Q |
| |
|
|||||| ||||| |||| ||||||||||||||| || |||| | |||||| | ||| || |||||||||| ||||||| | |||||||||| || |
|
|
| T |
28246072 |
tttctctcaaaacattaaaactttaacctctctcacgcgttccttcattgaatctatcaatcgcactgacctgttcctcattgttgattgtttcctaaat |
28246171 |
T |
|
| Q |
334 |
ttggaggatcttgctttgagtgattgcgatgacatatctgaagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaa |
425 |
Q |
| |
|
|| || |||| |||||| ||||| | || ||||||||||||||||| ||||||||||| || ||||||||| || | ||||||||| |
|
|
| T |
28246172 |
ttacagctacttgatttgagccattgcaaagatgtatctgaagaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaa |
28246263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 429
Target Start/End: Complemental strand, 88998 - 88943
Alignment:
| Q |
374 |
aagaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta |
429 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
88998 |
aagaaggtattgatcagattttaaggagatgttgtaagattagacatttgaactta |
88943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 411
Target Start/End: Original strand, 532 - 578
Alignment:
| Q |
365 |
acatatctgaagaaggtattagtcatgttttaaggagatgttgtaag |
411 |
Q |
| |
|
|||||||||||||||||||| || | ||| ||||||||||||||||| |
|
|
| T |
532 |
acatatctgaagaaggtatttgtgaagttctaaggagatgttgtaag |
578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0807 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0807
Description:
Target: scaffold0807; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 1388 - 1437
Alignment:
| Q |
381 |
tattagtcatgttttaaggagatgttgtaagatgacacatttgaacttag |
430 |
Q |
| |
|
|||| |||| |||||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
1388 |
tatttgtcaagttttaaggagatgttataagattagacatttgaacttag |
1437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University