View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21283_high_2 (Length: 509)

Name: NF21283_high_2
Description: NF21283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21283_high_2
NF21283_high_2
[»] chr7 (39 HSPs)
chr7 (10-214)||(40811397-40811601)
chr7 (336-492)||(40811723-40811879)
chr7 (4-148)||(32255060-32255205)
chr7 (69-208)||(669231-669369)
chr7 (4-147)||(43460725-43460868)
chr7 (3-138)||(13564150-13564285)
chr7 (42-144)||(35295809-35295909)
chr7 (50-159)||(2414863-2414970)
chr7 (141-214)||(41078931-41079004)
chr7 (51-158)||(44372848-44372953)
chr7 (51-158)||(44381704-44381809)
chr7 (69-180)||(46201266-46201377)
chr7 (4-155)||(47454408-47454557)
chr7 (33-114)||(11502356-11502438)
chr7 (50-150)||(22537675-22537776)
chr7 (18-107)||(41078841-41078930)
chr7 (45-149)||(43441459-43441561)
chr7 (3-138)||(22336049-22336184)
chr7 (3-157)||(47059178-47059334)
chr7 (19-109)||(40509675-40509764)
chr7 (96-208)||(5095228-5095340)
chr7 (96-208)||(24051365-24051477)
chr7 (104-208)||(39752318-39752422)
chr7 (69-149)||(41328354-41328434)
chr7 (3-109)||(22538790-22538894)
chr7 (19-109)||(22115105-22115194)
chr7 (69-147)||(39981452-39981530)
chr7 (3-135)||(41079751-41079881)
chr7 (4-99)||(11501251-11501344)
chr7 (9-92)||(22337330-22337411)
chr7 (69-149)||(30334543-30334622)
chr7 (69-101)||(33779036-33779068)
chr7 (121-211)||(45454196-45454285)
chr7 (45-97)||(15992248-15992298)
chr7 (69-150)||(16756006-16756087)
chr7 (69-158)||(40508513-40508602)
chr7 (9-109)||(43459531-43459629)
chr7 (96-157)||(48312202-48312262)
chr7 (9-87)||(24282939-24283016)
[»] chr5 (23 HSPs)
chr5 (3-210)||(27705156-27705362)
chr5 (3-149)||(39603923-39604070)
chr5 (3-141)||(30910811-30910950)
chr5 (3-149)||(22047802-22047949)
chr5 (9-142)||(30859078-30859212)
chr5 (4-149)||(325087-325230)
chr5 (45-149)||(1102731-1102833)
chr5 (1-149)||(1010267-1010412)
chr5 (1-149)||(8521323-8521468)
chr5 (73-149)||(11262532-11262608)
chr5 (9-116)||(15548314-15548421)
chr5 (3-159)||(22308690-22308845)
chr5 (74-116)||(1009325-1009367)
chr5 (3-57)||(39605461-39605515)
chr5 (96-208)||(27262581-27262692)
chr5 (96-208)||(31171014-31171126)
chr5 (3-109)||(33173901-33174006)
chr5 (96-191)||(28393375-28393470)
chr5 (69-109)||(324174-324214)
chr5 (3-109)||(30912104-30912208)
chr5 (89-158)||(13520691-13520760)
chr5 (95-148)||(20539248-20539301)
chr5 (121-157)||(223410-223446)
[»] chr8 (37 HSPs)
chr8 (1-214)||(45281025-45281237)
chr8 (1-213)||(4810537-4810744)
chr8 (4-147)||(32798434-32798577)
chr8 (45-158)||(24192555-24192666)
chr8 (3-158)||(13117525-13117679)
chr8 (19-149)||(32695174-32695305)
chr8 (51-158)||(20180566-20180671)
chr8 (19-116)||(42872124-42872219)
chr8 (24-147)||(42098654-42098777)
chr8 (34-149)||(42877720-42877832)
chr8 (69-158)||(9854772-9854860)
chr8 (4-144)||(44076267-44076408)
chr8 (96-208)||(416413-416525)
chr8 (121-213)||(26696689-26696780)
chr8 (47-149)||(31845696-31845795)
chr8 (3-109)||(42100048-42100152)
chr8 (69-142)||(10669353-10669426)
chr8 (4-149)||(6397854-6397997)
chr8 (96-208)||(37400942-37401054)
chr8 (68-116)||(42362684-42362732)
chr8 (94-208)||(14030478-14030592)
chr8 (50-158)||(24305160-24305266)
chr8 (99-208)||(36803117-36803226)
chr8 (40-144)||(42870920-42871025)
chr8 (96-208)||(1659147-1659258)
chr8 (96-208)||(6337094-6337206)
chr8 (108-180)||(34504544-34504616)
chr8 (34-116)||(42878764-42878846)
chr8 (3-116)||(13116400-13116511)
chr8 (69-159)||(14840790-14840880)
chr8 (72-149)||(43202234-43202311)
chr8 (3-63)||(6398483-6398543)
chr8 (69-145)||(30786812-30786888)
chr8 (69-148)||(38696443-38696522)
chr8 (43-111)||(17701050-17701116)
chr8 (81-142)||(40437504-40437565)
chr8 (69-149)||(22620019-22620099)
[»] chr4 (48 HSPs)
chr4 (19-214)||(15449910-15450105)
chr4 (49-214)||(52239993-52240159)
chr4 (9-150)||(2312380-2312522)
chr4 (78-213)||(7053321-7053456)
chr4 (3-147)||(7707658-7707803)
chr4 (4-143)||(1794482-1794622)
chr4 (50-155)||(27850831-27850938)
chr4 (50-149)||(56085465-56085562)
chr4 (45-159)||(44498574-44498686)
chr4 (4-149)||(6349449-6349598)
chr4 (4-135)||(11968582-11968713)
chr4 (73-191)||(49896443-49896561)
chr4 (10-92)||(1588045-1588128)
chr4 (4-149)||(6348226-6348369)
chr4 (74-180)||(28590774-28590880)
chr4 (1-109)||(52963637-52963743)
chr4 (42-149)||(19750195-19750300)
chr4 (42-149)||(19789506-19789611)
chr4 (43-149)||(26629902-26630005)
chr4 (45-157)||(52138686-52138799)
chr4 (72-158)||(13165633-13165718)
chr4 (69-144)||(4871629-4871704)
chr4 (4-142)||(23201917-23202055)
chr4 (121-211)||(42872169-42872258)
chr4 (3-87)||(10168745-10168829)
chr4 (9-138)||(42810115-42810243)
chr4 (96-208)||(22161596-22161708)
chr4 (96-208)||(23317143-23317255)
chr4 (96-208)||(25922219-25922331)
chr4 (69-149)||(26496210-26496290)
chr4 (69-149)||(40723362-40723442)
chr4 (69-148)||(4714155-4714234)
chr4 (45-159)||(36845523-36845634)
chr4 (1-149)||(53432130-53432277)
chr4 (4-150)||(1587253-1587398)
chr4 (69-136)||(22069370-22069437)
chr4 (78-157)||(36243663-36243742)
chr4 (69-148)||(53435655-53435734)
chr4 (78-157)||(56157389-56157468)
chr4 (4-62)||(390288-390346)
chr4 (3-61)||(2310993-2311051)
chr4 (69-142)||(8682756-8682829)
chr4 (96-146)||(23103913-23103962)
chr4 (3-87)||(33232662-33232743)
chr4 (72-109)||(7708730-7708767)
chr4 (3-60)||(42871165-42871222)
chr4 (69-149)||(13166670-13166750)
chr4 (121-157)||(38555172-38555208)
[»] chr2 (28 HSPs)
chr2 (3-214)||(6030306-6030516)
chr2 (33-172)||(42641738-42641877)
chr2 (4-149)||(11317268-11317413)
chr2 (3-142)||(29219455-29219595)
chr2 (3-142)||(29332754-29332894)
chr2 (3-150)||(18616904-18617052)
chr2 (11-149)||(11547737-11547875)
chr2 (4-147)||(32469221-32469363)
chr2 (9-147)||(17459329-17459468)
chr2 (3-147)||(1085290-1085432)
chr2 (3-109)||(17460626-17460730)
chr2 (69-159)||(34513444-34513534)
chr2 (4-135)||(43033153-43033282)
chr2 (72-158)||(8320895-8320981)
chr2 (96-208)||(40323095-40323207)
chr2 (4-116)||(43034404-43034516)
chr2 (76-158)||(30748621-30748703)
chr2 (4-144)||(34464039-34464178)
chr2 (69-150)||(4920958-4921039)
chr2 (1-156)||(34512882-34513034)
chr2 (96-208)||(2384330-2384442)
chr2 (76-116)||(16295151-16295191)
chr2 (69-149)||(28611154-28611233)
chr2 (69-149)||(34467641-34467721)
chr2 (96-208)||(36215013-36215124)
chr2 (4-83)||(7437727-7437806)
chr2 (92-147)||(35903665-35903720)
chr2 (69-180)||(30749194-30749305)
[»] scaffold0077 (2 HSPs)
scaffold0077 (3-150)||(54083-54231)
scaffold0077 (3-92)||(52662-52749)
[»] chr3 (33 HSPs)
chr3 (3-142)||(10732036-10732175)
chr3 (4-148)||(38242417-38242561)
chr3 (46-158)||(35371020-35371132)
chr3 (4-155)||(12107874-12108028)
chr3 (3-142)||(3208554-3208693)
chr3 (4-100)||(53622733-53622830)
chr3 (63-149)||(26886402-26886488)
chr3 (3-159)||(42684946-42685101)
chr3 (72-155)||(10301072-10301155)
chr3 (61-116)||(34819218-34819273)
chr3 (43-144)||(14745106-14745205)
chr3 (49-114)||(27841645-27841710)
chr3 (48-208)||(48083343-48083501)
chr3 (96-208)||(3807834-3807945)
chr3 (96-180)||(28909477-28909561)
chr3 (3-114)||(53614208-53614319)
chr3 (3-149)||(41264553-41264699)
chr3 (1-116)||(3455558-3455673)
chr3 (68-149)||(10338872-10338953)
chr3 (69-157)||(7270458-7270546)
chr3 (96-208)||(44175728-44175840)
chr3 (96-191)||(33705349-33705444)
chr3 (75-116)||(11224776-11224817)
chr3 (4-61)||(18197218-18197275)
chr3 (9-109)||(26887497-26887595)
chr3 (4-107)||(10730956-10731057)
chr3 (69-149)||(49379837-49379917)
chr3 (3-181)||(36175333-36175509)
chr3 (96-191)||(37981533-37981627)
chr3 (69-144)||(53420452-53420527)
chr3 (96-181)||(44182426-44182511)
chr3 (72-149)||(53194513-53194590)
chr3 (69-149)||(13621055-13621135)
[»] chr1 (41 HSPs)
chr1 (3-158)||(15232822-15232976)
chr1 (4-142)||(45584915-45585054)
chr1 (88-208)||(12665944-12666064)
chr1 (3-140)||(16965035-16965173)
chr1 (69-158)||(9226107-9226196)
chr1 (4-157)||(15072682-15072835)
chr1 (4-149)||(46110353-46110496)
chr1 (4-159)||(50444590-50444743)
chr1 (2-109)||(16963903-16964008)
chr1 (4-104)||(27814363-27814462)
chr1 (69-158)||(6049317-6049406)
chr1 (69-150)||(52078044-52078125)
chr1 (69-133)||(13147333-13147397)
chr1 (69-149)||(15746668-15746747)
chr1 (69-157)||(18821632-18821720)
chr1 (61-109)||(34350240-34350288)
chr1 (69-149)||(48527669-48527749)
chr1 (69-149)||(35943347-35943428)
chr1 (3-109)||(49802837-49802941)
chr1 (78-152)||(28050465-28050539)
chr1 (69-158)||(26802075-26802164)
chr1 (69-146)||(41873875-41873952)
chr1 (69-150)||(51445725-51445806)
chr1 (69-149)||(14478401-14478481)
chr1 (69-149)||(48096933-48097013)
chr1 (33-148)||(49801717-49801832)
chr1 (69-116)||(3617431-3617478)
chr1 (105-208)||(8027403-8027506)
chr1 (72-135)||(10722291-10722354)
chr1 (347-422)||(35246008-35246083)
chr1 (72-149)||(13894752-13894828)
chr1 (69-145)||(44999367-44999443)
chr1 (1-43)||(15071410-15071452)
chr1 (71-149)||(34351866-34351943)
chr1 (69-159)||(46467281-46467370)
chr1 (50-142)||(5612993-5613082)
chr1 (92-149)||(46318519-46318576)
chr1 (50-116)||(9482574-9482637)
chr1 (71-107)||(14470993-14471029)
chr1 (69-109)||(23091487-23091527)
chr1 (3-43)||(24499661-24499701)
[»] scaffold0118 (1 HSPs)
scaffold0118 (9-150)||(43473-43615)
[»] chr6 (12 HSPs)
chr6 (33-148)||(7311626-7311741)
chr6 (3-142)||(17837686-17837825)
chr6 (3-149)||(29381630-29381776)
chr6 (33-116)||(5187555-5187638)
chr6 (9-161)||(23392290-23392443)
chr6 (33-149)||(18346650-18346766)
chr6 (69-142)||(11967351-11967424)
chr6 (69-149)||(11722921-11723001)
chr6 (69-149)||(12669858-12669938)
chr6 (2-100)||(32506976-32507073)
chr6 (3-102)||(23397303-23397400)
chr6 (105-208)||(13847764-13847866)
[»] scaffold0031 (2 HSPs)
scaffold0031 (4-161)||(124040-124194)
scaffold0031 (4-143)||(125137-125278)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-149)||(127501-127648)
[»] scaffold0013 (1 HSPs)
scaffold0013 (33-149)||(32671-32787)
[»] scaffold0219 (1 HSPs)
scaffold0219 (69-158)||(8083-8171)
[»] scaffold2071 (1 HSPs)
scaffold2071 (79-159)||(572-652)
[»] scaffold0034 (1 HSPs)
scaffold0034 (3-142)||(108583-108722)
[»] scaffold0035 (1 HSPs)
scaffold0035 (96-208)||(83063-83175)
[»] scaffold0201 (1 HSPs)
scaffold0201 (69-146)||(21262-21339)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 2e-90; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 40811397 - 40811601
Alignment:
Q  10 tccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40811397 tccctcatattttcctccgtatactaaataaatcctgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 40811496  T
Q  110 tcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacac 209  Q
    | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  40811497 ttctattaatatttttaatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtctattgtatcttcctgtgagtcaacaacac 40811596  T
Q  210 ttaac 214  Q
    |||||    
T  40811597 ttaac 40811601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 336 - 492
Target Start/End: Original strand, 40811723 - 40811879
Alignment:
Q  336 gatcctcttagttgactattaacatgaaaattgatgtaaagtcctcttagttgaaaattatttgaagccaatcattggacattgacatatcggcccctaa 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40811723 gatcctcttagttgactattaacatgaaaattgatgtaaagtcctcttagttgaaaattatttgaagccaatcattggacattgacatatcggcccccaa 40811822  T
Q  436 acatcacaattcatgaagttaaagaaaaagaaactatacagataaagcaataacaac 492  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40811823 acatcacaattcatgaagttaaagaaaaagaaactatatagataaagcaataacaac 40811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 32255060 - 32255205
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| |||||||  ||||||||||| | |||||||||||  ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  32255060 ttttgatccctcactttttcctccgtttgccaaataaatcccgacggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtcca 32255159  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
     ||||||||||||| ||  |||| |||| ||||||||||| |||||    
T  32255160 ccatagatcctattaattattttaatttcaaccgtttgattttttt 32255205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 69 - 208
Target Start/End: Complemental strand, 669369 - 669231
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttag 168  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||| || || || |||||||||||||||||||||||| |||||||||| ||||||    
T  669369 atgtctatggtggaccatc-ttaagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgatcttttttaataaaagataactgttag 669271  T
Q  169 atcatgaatgtccgttgtatcttcccgtgagtcaacaaca 208  Q
    |||||| ||||   ||||||||| |  ||| |||||||||    
T  669270 atcatgcatgtttattgtatcttacaatgaatcaacaaca 669231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 43460868 - 43460725
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||| ||||||||  ||||||||| | | ||||||||||| | || ||||| |||||| ||||| ||||||||||||||||||| ||||||||||||||     
T  43460868 ttttagtccctcactttttcctccatttgccaaataaatcctcacagttaagtttaactcaaattatgtctatggtggaccaactttaagagtggtccac 43460769  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    ||||||||||||| ||  |||| ||||||||| |||||||||||    
T  43460768 catagatcctattaattattttaatttaaaccctttgatctttt 43460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 13564285 - 13564150
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||||||| |||||||||||| | |||||||||||  |||| |||| |||||||| |||| |||||||||||||| || |||||||||||||||    
T  13564285 gttttagtccctcacattttcctccgtttgccaaataaatcccgacg-ttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtcc 13564187  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtt 138  Q
    | ||||||||||||| ||  |||| |||| |||||||    
T  13564186 accatagatcctattaattattttaatttgaaccgtt 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 35295809 - 35295909
Alignment:
Q  42 tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga 141  Q
    ||||||| |||||||||||||| ||  || ||| ||||||||||||||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||    
T  35295809 tcatgaccgttaactttaaccccaa--atatctgtggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttga 35295906  T
Q  142 tct 144  Q
    |||    
T  35295907 tct 35295909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 2414863 - 2414970
Alignment:
Q  50 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||| ||  ||||||||  |||||||||||||| ||||||||| ||||||||||||| || || || |||||||||||||||  ||||||    
T  2414863 gttaactttaaccccaa--atgtctataatggaccaaccttaaaagtggtccaccatagatcctattaattttcttaatttaaaccgtttgaattttttt 2414960  T
Q  150 attaaaagat 159  Q
    ||||||||||    
T  2414961 attaaaagat 2414970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 41078931 - 41079004
Alignment:
Q  141 atcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaac 214  Q
    ||||||||||||||||||| |||||||||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  41078931 atcttttttattaaaagatgattgttagatcatgcatgtctattgtatcttccggtgagtcaacaacacttaac 41079004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 44372848 - 44372953
Alignment:
Q  51 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||     
T  44372848 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttc 44372945  T
Q  151 ttaaaaga 158  Q
    ||||||||    
T  44372946 ttaaaaga 44372953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 44381704 - 44381809
Alignment:
Q  51 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||     
T  44381704 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttc 44381801  T
Q  151 ttaaaaga 158  Q
    ||||||||    
T  44381802 ttaaaaga 44381809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 46201266 - 46201377
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttag 168  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||| ||  |||| || ||||| |||||| ||||||||||||||||  |  |||||    
T  46201266 atgtctatggtgaaccaaccttaagagtggtccaccatagatcatattaattattttaatataaactgtttgaccttttttattaaaagagtaccgttag 46201365  T
Q  169 atcatgaatgtc 180  Q
    |||||| |||||    
T  46201366 atcatgcatgtc 46201377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 47454408 - 47454557
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  |||| || ||| | |||||||||||  |||  ||||||||||| | ||  ||||||||||| |||||||||||||||||||||||    
T  47454408 ttttggtccctcaagtttttcttcgtttgccaaataaatcccgactattaactttaactctaa--atgtctatggtagaccaaccttaagagtggtccat 47454505  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatcttttttattaaa 155  Q
    | |||| | |||| || || || |||| ||||||||||| |||||| |||||    
T  47454506 cgtagaccttattaattttattaattttaaccgtttgatttttttttttaaa 47454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 11502438 - 11502356
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatccta 114  Q
    |||||||||||   || ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  11502438 ccaaataaatcccaacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccatagatccta 11502356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 22537675 - 22537776
Alignment:
Q  50 gttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
    ||||| ||||||| |||||||||| || |||| ||||||||||| |||| |||| ||||||||||||| ||  |||| |||||||||||||||| |||||    
T  22537675 gttaattttaacctcaaatgatgtttacggtgaaccaaccttaatagtgatccaccatagatcctattaattattttaatttaaaccgtttgattttttt 22537774  T
Q  149 ta 150  Q
    ||    
T  22537775 ta 22537776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 41078841 - 41078930
Alignment:
Q  18 attttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    |||||||||| | | || ||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||| ||||    
T  41078841 attttcctccatttgccgaataaatcccgacggttaactttaacccaaatgatgtatatggtggaccaatcttaaaaatggtccaccata 41078930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 43441459 - 43441561
Alignment:
Q  45 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||| ||||  ||||||| ||  |||| || ||||| ||||||| |    
T  43441459 tgacggttaactttaaccctaa--atgtctatggtgtaccaaccttaagagtggtccaccataagtcctattaattattttaatgtaaactgtttgatat 43441556  T
Q  145 ttttt 149  Q
    |||||    
T  43441557 ttttt 43441561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 22336049 - 22336184
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||  |||||||| || | |||||||||||  ||  ||||| |||||||| |||||||| |||||||||| ||||||||| ||||||||    
T  22336049 gttttagtccctcaccttttcctcagtttgccaaataaatcccgaatgttaagtttaaccccaaatgatg-ctatggtggatcaaccttaaaagtggtcc 22336147  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtt 138  Q
    | ||||||||||||| ||  |||| |||| |||||||    
T  22336148 accatagatcctattaattattttaatttcaaccgtt 22336184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 47059178 - 47059334
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||| |||||||  ||||||||||| | ||||||||||| |||| ||||| ||||||||     | |||||||||||| ||||||||||||| | |||    
T  47059178 gttttgatccctcactttttcctccgtttgccaaataaatcctgaccgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagtagccca 47059277  T
Q  103 tcatagatcctattca--tatttttgatttaaaccgtttgatcttttttattaaaag 157  Q
     |||||| | |||| |  | ||||| |||||||||||||||||| |||  |||||||    
T  47059278 ccatagaccttattaatttttttttaatttaaaccgtttgatctgtttatttaaaag 47059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 40509764 - 40509675
Alignment:
Q  19 ttttcctccgtataccaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    ||||||||||| |||||||||||||||   | ||||| |||||||| ||  |||||||| ||||||||||||||||||||||||| ||||||    
T  40509764 ttttcctccgtttaccaaataaatcattcggtgttaagtttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 40509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 5095228 - 5095340
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  5095228 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 5095327  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  5095328 tgaaccaacaaca 5095340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 24051365 - 24051477
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  24051365 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 24051464  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  24051465 tgaaccaacaaca 24051477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 39752318 - 39752422
Alignment:
Q  104 catagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaa 203  Q
    |||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | ||||  |||    
T  39752318 catagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactgtgaaccaa 39752417  T
Q  204 caaca 208  Q
    |||||    
T  39752418 caaca 39752422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 41328354 - 41328434
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||| |||| |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  41328354 atgtctatggtggaacaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttt 41328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 22538894 - 22538790
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| ||||||||| ||||||||||| | |||||||||||  |||||||||||||||| | ||  || ||||||||| |||||| |||| || |||| |    
T  22538894 gttttagtccctcatcttttcctccgtttgccaaataaatctcgacggttaactttaactccaa--atatctatggtgtaccaacattaaaagcggtcta 22538797  T
Q  103 tcataga 109  Q
    || ||||    
T  22538796 tcgtaga 22538790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 22115194 - 22115105
Alignment:
Q  19 ttttcctccgtataccaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    |||||||||||  |||||||||||| |   | ||||| |||||||| ||  |||||||| ||||||||||||||||||||||||| ||||||    
T  22115194 ttttcctccgttnaccaaataaatcnttcggtgttaagtttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 22115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 39981452 - 39981530
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    ||||||||||||||||||| |||| | ||||||| ||||||||| ||| ||  || | |||||||||||||||| ||||    
T  39981452 atgtctatggtggaccaactttaaaaatggtccaccatagatccaattaattattctaatttaaaccgtttgatttttt 39981530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 41079881 - 41079751
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||| || ||||||||||| | | |||||||||   || |||||||||||| | ||  || ||||||||||| |||| |||| |||||||||    
T  41079881 gttttggtcccttatcttttcctccgtttgctaaataaatccctaccgttaactttaactccaa--atatctatggtggaacaacattaaaagtggtcca 41079784  T
Q  103 tcatagatcctattcatatttttgatttaaacc 135  Q
    || |||| | |||| || || ||||||| ||||    
T  41079783 tcgtagaccttattaattttgttgattttaacc 41079751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 11501251 - 11501344
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggt 99  Q
    |||| ||||||||  ||||||||| | | |||||||||||  ||| ||||||||||||   ||  |||||||||||||||||||||||| ||||||    
T  11501251 ttttagtccctcaccttttcctccatttgccaaataaatcccgactgttaactttaacttcaa--atgtctatggtggaccaaccttaaaagtggt 11501344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 22337411 - 22337330
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaa 92  Q
    |||||| | |||||||||||| | ||||||||||| |||| ||||| ||||||   ||  ||||||||||||||||||||||||    
T  22337411 gtcccttacattttcctccgtttgccaaataaatcctgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaa 22337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 30334622 - 30334543
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||| |||||||| ||||||   ||||| ||||||||||||| || ||||| |||||||||||| ||| ||||||    
T  30334622 atgtctatggaggaccaactttaagaacagtccaccatagatcctattaat-tttttaatttaaaccgttagatttttttt 30334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 33779068 - 33779036
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtcc 101  Q
    |||||||||||||||||||||||||||||||||    
T  33779068 atgtctatggtggaccaaccttaagagtggtcc 33779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 45454196 - 45454285
Alignment:
Q  121 tttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacactt 211  Q
    ||||| |||||| ||||||||||||||| |||||||||  || ||||||| ||| || ||   |||||||| || ||||||||||||||||    
T  45454196 tttttaatttaagccgtttgatctttttaattaaaagaggatcgttagattatgcatatctactgtatctt-ccatgagtcaacaacactt 45454285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 15992248 - 15992298
Alignment:
Q  45 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtg 97  Q
    |||| |||||||||||||  ||  |||||||||||||||||||||||||||||    
T  15992248 tgactgttaactttaacctcaa--atgtctatggtggaccaaccttaagagtg 15992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 16756006 - 16756087
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    |||||||||||| | ||||||||| ||| ||| | ||||||||||||| ||  |||| |||| |||| |||||| |||||||    
T  16756006 atgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattttaaccatttgatttttttta 16756087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 40508513 - 40508602
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||| ||| ||||||||| ||||| |||||||   ||| || ||||  |||| ||||||||||| | |||| ||||||||    
T  40508513 atgtctatggtggatcaatcttaagagttgtccaccatagatttcattaattttttaaattttaaccgtttgatatgtttttttaaaaga 40508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 43459531 - 43459629
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatag 108  Q
    ||||||||| ||||||||||| | |||||||||||  | | ||||| |||||| | ||  |||||||||||||| ||||||||| | |||| |||| |||    
T  43459531 gtccctcatgttttcctccgtttgccaaataaatctcggctgttaagtttaactccaa--atgtctatggtggatcaaccttaaaaatggtacatcgtag 43459628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 48312202 - 48312262
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    ||||||| ||||||||||||| || ||||| |||||||  |||||||||||||| |||||||    
T  48312202 tggtccaccatagatcctattaat-tttttaatttaaatggtttgatctttttttttaaaag 48312262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 24283016 - 24282939
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaac 87  Q
    |||||||| |||||||||||| | |||||||||| ||||   |||||||||||||| ||  |||||||||||||| ||||    
T  24283016 gtccctcacattttcctccgtttgccaaataaatccatgggtgttaactttaaccccaa--atgtctatggtggatcaac 24282939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 5e-54; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 3 - 210
Target Start/End: Complemental strand, 27705362 - 27705156
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||| |||||||||| | | ||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  27705362 gttttggtccctcagattttcctccttttgccaaataaatacagacagttaactttaatccaaatgatgtctatggtggaccaaccttaaaagtggtcca 27705263  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtca 202  Q
     ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| || |||||||| || |||||   |  ||||||| ||||||||    
T  27705262 ccatagatcctattaatatttttaatttaaaccgtttgatattttttattaaaagatgatcgttagatc-tgcatgtctactacatcttccagtgagtca 27705164  T
Q  203 acaacact 210  Q
    ||||||||    
T  27705163 acaacact 27705156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 39603923 - 39604070
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    |||||||||||||| |||||||||||| | |||||||||||||||| ||||| |||||||| |||||||||||||||| |||||||||||| |||| |||    
T  39603923 gttttggtccctcaaattttcctccgtttgccaaataaatcatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaaagtgatcc 39604022  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    | ||||||||||||| ||  |||| |||||||| ||||||| ||||||    
T  39604023 accatagatcctattaattattttaatttaaactgtttgatttttttt 39604070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 30910811 - 30910950
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||||||| ||||||||| || |||||||||||||  ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  30910811 gttttagtccctcacattttcctctgtttaccaaataaatctcgactgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtcc 30910910  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttga 141  Q
    | ||||||||||||| ||  |||| |||| ||||||||||    
T  30910911 accatagatcctattaattattttaatttcaaccgtttga 30910950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 22047802 - 22047949
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||||||||||||| ||||||||||| | ||||||||||| || | ||||| |||||| | ||||||||||||||||||| ||||||||||||||||||    
T  22047802 gttttggtccctcattttttcctccgtttgccaaataaatcctggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtcc 22047901  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    | |||| |||||||  ||  |||| |||||||||||||||| ||||||    
T  22047902 accataaatcctatgaattattttaatttaaaccgtttgatttttttt 22047949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 30859212 - 30859078
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    |||||||| ||||||||| || | |||||||| || |||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  30859212 gtccctcacattttcctctgtttgccaaataagtcttgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccata 30859113  T
Q  108 gatcctattcatatttttgatttaaaccgtttgat 142  Q
    ||||||||| ||  |||| ||||||||||||||||    
T  30859112 gatcctattaattattttaatttaaaccgtttgat 30859078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 325230 - 325087
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  ||||||||||| | |||||||||||  ||| |||||||||||| | ||  |||||||||||||||||||||||| ||||||||||    
T  325230 ttttggtccctcaagttttcctccgtttgccaaataaatcccgactgttaactttaactctaa--atgtctatggtggaccaaccttaatagtggtccat 325133  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    | |||| | |||| || || || |||| ||||||||||||||||||    
T  325132 cgtagaccttattaattttgttaattttaaccgtttgatctttttt 325087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 1102731 - 1102833
Alignment:
Q  45 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    |||| |||||||||||||| ||  ||||||||||| |||||||||||||||||||||| |||||||| |||| ||  |||| ||||||||||||||||||    
T  1102731 tgactgttaactttaaccccaa--atgtctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgatct 1102828  T
Q  145 ttttt 149  Q
    |||||    
T  1102829 ttttt 1102833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1010412 - 1010267
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    ||||||||||||||||  |||  ||||||    ||||||||||  |||||||||||||||||| ||  |||| |||||||||||||||||||||||||||    
T  1010412 atgttttggtccctcacgtttgtctccgtcagtcaaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagagtggtc 1010315  T
Q  101 catcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |  ||||||||||||| || | ||| |||| |||| |||||||| ||||    
T  1010314 cgccatagatcctattaat-tatttaatttcaaccctttgatctatttt 1010267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8521323 - 8521468
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    ||||||||||||||||  |||  ||||||    ||||||||||  |||||||||||||||||| ||  |||| ||||||||||||||||||||| |||||    
T  8521323 atgttttggtccctcacgtttgtctccgtcagtcaaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtc 8521420  T
Q  101 catcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    || ||||||||||||| || | ||| |||| |||| |||||||| ||||    
T  8521421 caccatagatcctattaat-tatttaatttcaaccctttgatctatttt 8521468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 11262532 - 11262608
Alignment:
Q  73 ctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||  || | ||||||||| |||||||||||||    
T  11262532 ctatggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgatctttttt 11262608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 15548314 - 15548421
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    ||||||||| ||||||||||| | ||||||||||| || | ||||| |||||||| ||||||||||| ||||||||||||||||||| || |||| ||||    
T  15548314 gtccctcat-ttttcctccgtttgccaaataaatcctgcctgttaagtttaaccctaaatgatgtctctggtggaccaaccttaagaatgatccaccata 15548412  T
Q  108 gatcctatt 116  Q
     ||||||||    
T  15548413 aatcctatt 15548421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 22308845 - 22308690
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatc-atgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||||||| ||||| |||||| | ||||||||||| |||   ||||| |||||||| ||  |||||||||||||||| ||||||||||||||||    
T  22308845 gttttagtccctcacattttgctccgtttgccaaataaatccatggttgttaagtttaaccccaa--atgtctatggtggacctaccttaagagtggtcc 22308748  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    | ||||||   |||| |  ||||| || |||||| |||||||| |||| | |||||||    
T  22308747 accatagacattattaaattttttaatgtaaaccatttgatctgttttttaaaaagat 22308690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 1009325 - 1009367
Alignment:
Q  74 tatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1009325 tatggtggaccaaccttaagagtggtccaccatagatcctatt 1009367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 39605515 - 39605461
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactt 57  Q
    |||||||||||||| |||||||||||| | ||||||||||| |||||||||||||    
T  39605515 gttttggtccctcagattttcctccgtttgccaaataaatcctgacggttaactt 39605461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 27262581 - 27262692
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||| ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  27262581 tggtccattatagatcctattttt-tttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 27262679  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  27262680 tgaaccaacaaca 27262692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 31171014 - 31171126
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  31171014 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 31171113  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  31171114 tgaaccaacaaca 31171126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 33174006 - 33173901
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcat-gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||  |||||||| || | ||||||||||| | | | ||||| |||||||| ||  ||||||||||||||||||||||||||||||||     
T  33174006 gttttagtccctcaccttttcctctgtttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtggtct 33173909  T
Q  102 atcataga 109  Q
    | ||||||    
T  33173908 accataga 33173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 28393375 - 28393470
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatctt 191  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  ||||||||    
T  28393375 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 28393470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 324174 - 324214
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  324174 atgtctatggtggaccaactttaatagtggtccatcataga 324214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 30912208 - 30912104
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| ||||||||  |||| |||||| | |||||||||||   |  |||||||||||| | ||  || ||||||||||||||||||||| |||||| ||    
T  30912208 gttttagtccctcacctttttctccgtttgccaaataaatcccaagtgttaactttaactccaa--atatctatggtggaccaaccttaaaagtggtaca 30912111  T
Q  103 tcataga 109  Q
    |||||||    
T  30912110 tcataga 30912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 13520760 - 13520691
Alignment:
Q  89 ttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    ||||||||||| || ||||||||||||| ||   |||||||||||| ||| ||| |||||||| ||||||    
T  13520760 ttaagagtggttcaccatagatcctattaattaatttgatttaaactgttggattttttttataaaaaga 13520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 20539301 - 20539248
Alignment:
Q  95 gtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
    |||||| |||||||| | |||| || ||||| ||||||||||||||||||||||    
T  20539301 gtggtctatcatagaccttattaatttttttaatttaaaccgtttgatcttttt 20539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 223410 - 223446
Alignment:
Q  121 tttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  223410 tttttaatttaaaccgtttgatcttttttatttaaag 223446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 8e-53; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 45281237 - 45281025
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    |||||||| ||| ||| |||||||||| | | |||||||||||   || ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45281237 atgttttgatccttcagattttcctccatttgccaaataaatcccaacagttaactttaatccaaatgatgtctacggtggaccaaccttaagagtggtc 45281138  T
Q  101 catcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagt 200  Q
     | |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||| |||||   |||||||| || |||||    
T  45281137 taccataaatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagatgaacgttagatcatgcatgtctactgtatctt-ccatgagt 45281039  T
Q  201 caacaacacttaac 214  Q
    ||||||||||||||    
T  45281038 caacaacacttaac 45281025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4810537 - 4810744
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggt 99  Q
    |||||||||||| ||| ||||| |||||| | |||||||||||  |||||||||||||||||| |||||||||||||||||||      |||||||||||    
T  4810537 atgttttggtccttcaaatttttctccgtttgccaaataaatcccgacggttaactttaaccccaaatgatgtctatggtggaa-----ttaagagtggt 4810631  T
Q  100 ccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgag 199  Q
    ||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||  || ||||||||||  || ||  ||||||||| || ||||    
T  4810632 ccaccatagatcctattaatatttttaatttaaactgtttgatcttttttattaaaagaggatcgttagatcatacatatctattgtatctt-ccttgag 4810730  T
Q  200 tcaacaacacttaa 213  Q
    ||||||||||||||    
T  4810731 tcaacaacacttaa 4810744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 32798577 - 32798434
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||| ||||||||  |||| |||||| |  |||||||||| | |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||     
T  32798577 ttttagtccctcaattttttctccgtttgtcaaataaatcctcacggttaagtttaactcaaatgatgtctatggtggatcaaccttaagagtggtccac 32798478  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    ||||||||||||| ||  |||| |||||||||||||||||||||    
T  32798477 catagatcctattaattattttaatttaaaccgtttgatctttt 32798434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 24192666 - 24192555
Alignment:
Q  45 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    |||| |||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||| |    
T  24192666 tgactgttaactttaaccctaa--atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattt 24192569  T
Q  145 tttttattaaaaga 158  Q
    ||||| ||||||||    
T  24192568 tttttcttaaaaga 24192555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 13117679 - 13117525
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| |||||||| ||||||||| || | |||||||||||  |||  | || ||||||||||||||| | ||| |||||||||| |||| |||||||||    
T  13117679 gttttagtccctcacattttcctctgtttgccaaataaatcccgaccatcaagtttaacccaaatgatctatatagtggaccaactttaaaagtggtcca 13117580  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||| ||  |||| || | ||||||||||| |||||| ||||||||    
T  13117579 tcatagatcctattaattattttaatatcaaccgtttgatgtttttt-ttaaaaga 13117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 32695305 - 32695174
Alignment:
Q  19 ttttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattc 117  Q
    |||||||| || | |||||| | || |||| ||||| |||||||| ||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||     
T  32695305 ttttcctctgtttgccaaattagtcctgaccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctatta 32695206  T
Q  118 atatttttgatttaaaccgtttgatctttttt 149  Q
    ||  |||| |||||||||||||||| ||||||    
T  32695205 attattttaatttaaaccgtttgatttttttt 32695174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 20180671 - 20180566
Alignment:
Q  51 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||     
T  20180671 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttc 20180574  T
Q  151 ttaaaaga 158  Q
    ||||||||    
T  20180573 ttaaaaga 20180566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 42872219 - 42872124
Alignment:
Q  19 ttttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    ||||||||||| |  |||||||||| ||||||||||||||||||  ||  ||||||||||| |||||||||||||||||||| | |||||||||||||    
T  42872219 ttttcctccgtttgtcaaataaatcctgacggttaactttaacctcaa--atgtctatggtagaccaaccttaagagtggtctaccatagatcctatt 42872124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 42098654 - 42098777
Alignment:
Q  24 ctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatt 122  Q
    |||||| | |||||||||||  ||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||       
T  42098654 ctccgtttgccaaataaatcc-gactgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaattac 42098752  T
Q  123 tttgatttaaaccgtttgatctttt 147  Q
    ||| |||| ||||||||||| ||||    
T  42098753 tttaatttcaaccgtttgatttttt 42098777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 42877720 - 42877832
Alignment:
Q  34 caaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaa 133  Q
    ||||||||||  |||||||||||||||||| ||  |||| ||||||||||||||||||||| ||||||| ||||||||||||| || | ||| |||| ||    
T  42877720 caaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat-tatttaatttcaa 42877816  T
Q  134 ccgtttgatctttttt 149  Q
    || |||||||| ||||    
T  42877817 ccctttgatctatttt 42877832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 9854860 - 9854772
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||  || | ||||||||| |||||| |||||| ||||||||    
T  9854860 atgtctatggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaaccatttgat-tttttttttaaaaga 9854772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 44076408 - 44076267
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||||| |||||  ||||||||||| | |||||||||||   || ||||| |||||||| ||||||||||||||||||| |||| |||| | || ||||    
T  44076408 ttttggtgcctcaatttttcctccgtttgccaaataaatccctacagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatcca 44076309  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
     |||| ||| |||| || ||||| ||||||||| ||||||||    
T  44076308 ccataaatcttattaatttttttaatttaaaccatttgatct 44076267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 416525 - 416413
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  ||||||| || ||||||||||||||||||||| ||||  || |||||||||||||| ||||||  |||||||| | |    
T  416525 tggtccactatagatcctattattatttttaatataaaccgtttgatcttttttaataaagaatgattgttagatcatgcatgtccactgtatcttactg 416426  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  416425 tgaaccaacaaca 416413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 26696689 - 26696780
Alignment:
Q  121 tttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaa 213  Q
    ||||| ||||||||||||||||||||||||||||||||  || ||||||| ||| |||||   |||||||| ||||||||||||||| |||||    
T  26696689 tttttaatttaaaccgtttgatcttttttattaaaagaggatcgttagattatgcatgtctactgtatctt-ccgtgagtcaacaacgcttaa 26696780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 31845795 - 31845696
Alignment:
Q  47 acggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 146  Q
    ||||||||||||||||| ||  |||||||||||| |||||| |||||||||||||| ||||| ||||||| ||  |||| || ||||| |||||||||||    
T  31845795 acggttaactttaaccccaa--atgtctatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatcttt 31845699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 42100152 - 42100048
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||| |||||||||||||||||||| | |||||||| ||  ||| ||||||||||||   ||  |||||| ||||||||||||||||| |||||||||    
T  42100152 gttttgatccctcatattttcctccgtttgccaaataattcccgactgttaactttaacttcaa--atgtctttggtggaccaaccttaaaagtggtcca 42100055  T
Q  103 tcataga 109  Q
    || ||||    
T  42100054 tcgtaga 42100048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 10669426 - 10669353
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| |   |||| |||||||||| |||||    
T  10669426 atgtctatggtgaaccaaccttaagagtggtccaccatagatcctattaaatattttaatttaaaccgattgat 10669353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 6397854 - 6397997
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||| ||||||||| |||| |||||| | |||||||||||||||  ||||| |||||| |||||| |   |||||||  ||||||||| | |||||||||    
T  6397854 ttttagtccctcatttttttctccgtttgccaaataaatcatgaatgttaaatttaactccaaataa---ctatggtaaaccaacctttacagtggtcca 6397950  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
     |||||| | |||| || ||||| ||||||||| |||||||| ||||    
T  6397951 ccatagaccttattaatttttttaatttaaaccatttgatctgtttt 6397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 37400942 - 37401054
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    ||||||| ||||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| |||| |  |||||||| | |    
T  37400942 tggtccaccatagatcctattaatttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgttcactgtatcttactg 37401041  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  37401042 tgaaccaacaaca 37401054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 42362732 - 42362684
Alignment:
Q  68 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  42362732 gatgtctatggtggaccaacattaagagtggttcatcatagatcctatt 42362684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 14030478 - 14030592
Alignment:
Q  94 agtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcc 193  Q
    |||||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| |    
T  14030478 agtggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttac 14030577  T
Q  194 cgtgagtcaacaaca 208  Q
     ||||  ||||||||    
T  14030578 tgtgaaccaacaaca 14030592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 24305160 - 24305266
Alignment:
Q  50 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||| ||  ||||||||||||||||||| ||||||||| || ||| ||||||||||| || ||||  | || |||  ||||||||||| |    
T  24305160 gttaactttaaccctaa--atgtctatggtggaccaacattaagagtgatctatcttagatcctattaattttttaaacttcaactatttgatcttttgt 24305257  T
Q  150 attaaaaga 158  Q
     ||||||||    
T  24305258 tttaaaaga 24305266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 36803226 - 36803117
Alignment:
Q  99 tccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtga 198  Q
    ||||| ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | ||||    
T  36803226 tccattatagatcctatttttttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactgtga 36803127  T
Q  199 gtcaacaaca 208  Q
      ||||||||    
T  36803126 accaacaaca 36803117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 42870920 - 42871025
Alignment:
Q  40 aatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtt 138  Q
    |||| |||| ||||| |||||||| ||| ||||||||| ||||||||| ||||||||||||||| | |||| | |||| |  ||| | ||||||||||||    
T  42870920 aatcctgactgttaagtttaaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaaaccgtt 42871019  T
Q  139 tgatct 144  Q
    ||||||    
T  42871020 tgatct 42871025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 1659258 - 1659147
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  |||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  1659258 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 1659160  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  1659159 tgaaccaacaaca 1659147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 6337206 - 6337094
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  6337206 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaagattgttagatcatgcatgtccactgtatcttactg 6337107  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  6337106 tgaaccaacaaca 6337094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 34504616 - 34504544
Alignment:
Q  108 gatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtc 180  Q
    ||||||||| || ||||| ||||||||  ||||||||||||||||||||||  || ||||||||||| |||||    
T  34504616 gatcctattaatttttttaatttaaactctttgatcttttttattaaaagaggatcgttagatcatgcatgtc 34504544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 42878846 - 42878764
Alignment:
Q  34 caaataaatcatgacggttaactttaaccc---aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    |||||||||| |||| ||||||||||||||   |||  |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  42878846 caaataaatcctgacagttaactttaaccccccaaa--atgt-tatggtggaccaaccttaagtgtggtccaccatagatcctatt 42878764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 13116400 - 13116511
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| |||| ||| |||||||||||| | |||||||||||  ||| |||||||||||| | ||  ||||||||  | |||||| ||| |||||||||||    
T  13116400 gttttagtccttcacattttcctccgtttgccaaataaatcccgactgttaactttaactccaa--atgtctataatagaccaatcttcagagtggtcca 13116497  T
Q  103 tcatagatcctatt 116  Q
    || |||| ||||||    
T  13116498 tcgtagaccctatt 13116511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 14840880 - 14840790
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    ||||||||||||||||||| |||| |||| |||| ||||| || |||| |  ||||| |||||||||||||||| | |||| | |||||||    
T  14840880 atgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgatatgttttctaaaaagat 14840790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 43202234 - 43202311
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||  |  |||  |||||||| ||||||| ||||||    
T  43202234 tctatagtggatcaaccttaagagtggtccaccatagatcctattagttatttaaatttaaactgtttgatttttttt 43202311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 6398543 - 6398483
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc 63  Q
    ||||| ||||||||| ||||||||||| |  ||||||||||||||| ||||| ||||||||    
T  6398543 gttttagtccctcattttttcctccgtttgtcaaataaatcatgactgttaagtttaaccc 6398483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 30786812 - 30786888
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 145  Q
    |||||||||||||| |||| |||| |||||||||||||| | | |||| || || || |||| ||||||||||||||    
T  30786812 atgtctatggtggatcaactttaaaagtggtccatcataaaccttattaattttgttaattttaaccgtttgatctt 30786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 38696443 - 38696522
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||  ||| || ||| | |||| |||| |||||| |||||    
T  38696443 atgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttgattttttt 38696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 17701050 - 17701116
Alignment:
Q  43 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatc 111  Q
    ||||||||||||||||||| | ||  || |||||| |||| |||||||| |||||||||| ||||||||    
T  17701050 catgacggttaactttaactctaa--atttctatgatggatcaaccttacgagtggtccaccatagatc 17701116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 40437565 - 40437504
Alignment:
Q  81 gaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    |||||||||||| ||||||||| | ||||||||||| ||  |||| |||||||| |||||||    
T  40437565 gaccaaccttaaaagtggtccaccgtagatcctattaattattttaatttaaactgtttgat 40437504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 22620019 - 22620099
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||| |||| || ||| |||||||  |||||| ||||||| |||| ||  |||| |||||||||||||||| ||||||    
T  22620019 atgtctaaggtgaactaactttaagagctgtccattatagatcatattaatcatttttatttaaaccgtttgatttttttt 22620099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 15450105 - 15449910
Alignment:
Q  19 ttttcctccgtataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattc 117  Q
    ||||||||||| | ||||||||||| | |||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||     
T  15450105 ttttcctccgtttgccaaataaatctt-acggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctatta 15450007  T
Q  118 atatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaac 214  Q
    |||||||| |||||||| ||||| |||||||||||||||||| || ||||||||||| |||||   |||||||||| ||||||||||| ||||||||    
T  15450006 atatttttaatttaaactgtttgctcttttttattaaaagatgatcgttagatcatgcatgtctagtgtatcttccggtgagtcaacatcacttaac 15449910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 52239993 - 52240159
Alignment:
Q  49 ggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga-tctttt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| | ||||    
T  52239993 ggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaaccgtttgattttttt 52240092  T
Q  148 ttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaac 214  Q
    |||||||||||||   |||| |||||| |||||    ||||||||| ||||| |||||| |||||||    
T  52240093 ttattaaaagatagccgttatatcatgcatgtctaccgtatcttccagtgagccaacaatacttaac 52240159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 2312522 - 2312380
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    ||||||||  ||||||||||| | |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||    
T  2312522 gtccctcactttttcctccgtttgccaaataaatcatgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccata 2312423  T
Q  108 gatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    ||||||||| ||  |||| |||||||| ||||||| |||||||    
T  2312422 gatcctattaattattttaatttaaactgtttgatttttttta 2312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 7053321 - 7053456
Alignment:
Q  78 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaat 177  Q
    ||||||||| |||||||||| |||| ||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||  || ||||||||||| ||    
T  7053321 gtggaccaatcttaagagtgatccaccatagatcctattaatttttttaatttaaatcgtttgatcttttttattaaaagaggatcgttagatcatgcat 7053420  T
Q  178 gtccgttgtatcttcccgtgagtcaacaacacttaa 213  Q
    |||   |||||||| | |||||||||||||||||||    
T  7053421 gtctactgtatctttcagtgagtcaacaacacttaa 7053456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 7707658 - 7707803
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||| ||| ||||||||| || | ||||||||||| ||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  7707658 gttttagtccatcacattttcctctgtttgccaaataaatcctgacggttagctttaacaccaaatgatgtctttggtagaccaaccttaagagtggtcc 7707757  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    | ||||||||||||| ||  |||| |||| ||||||||||| ||||    
T  7707758 accatagatcctattaattattttaatttcaaccgtttgatttttt 7707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 1794482 - 1794622
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| |||||||  |||||||| || |  |||||||||| | |||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  1794482 ttttgatccctcactttttcctctgtttgtcaaataaatcctaacggttaagtttaatcccaaatgatgtatatggtggaccaaccttaagagtggtcca 1794581  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatc 143  Q
     |||||| | |||| |  ||||| |||||||||||||||||    
T  1794582 ccatagaccttattaaattttttaatttaaaccgtttgatc 1794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 27850938 - 27850831
Alignment:
Q  50 gttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga-tctttt 147  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||| ||||||||||||||| ||||||    
T  27850938 gttaagtttaacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaaccgtttgattctttt 27850839  T
Q  148 ttattaaa 155  Q
    || |||||    
T  27850838 tttttaaa 27850831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 56085465 - 56085562
Alignment:
Q  50 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||| ||||||    
T  56085465 gttaactttaaccccaa--atgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatttttttt 56085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 44498574 - 44498686
Alignment:
Q  45 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    |||||||||||||||||   ||  |||||||||||||| ||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||| |    
T  44498574 tgacggttaactttaactttaa--atgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattt 44498671  T
Q  145 tttttattaaaagat 159  Q
    ||||| |||||||||    
T  44498672 tttttcttaaaagat 44498686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 6349598 - 6349449
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||  ||||| ||||| ||||||||| |||  ||  ||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  6349598 ttttggtccctcaccttttcttccgtttaccaaatagatcccgaacgttaagtttaaccccaaatgatgtatatggtggatcaaccttaagagtggtcca 6349499  T
Q  103 tcatagatcctattcatat---ttttgatttaaaccgtttgatctttttt 149  Q
     |||||| | |||  ||||   |||| |||||||| ||||||||||||||    
T  6349498 ccatagaccatatatatatatattttaatttaaactgtttgatctttttt 6349449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 11968582 - 11968713
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    ||||||||||||| ||||| |||||| |   ||||||||   | | || ||||||||| || || ||||||||| |||||||||||||||||||||||||    
T  11968582 ttttggtccctcagattttgctccgtttgtaaaataaattccggctgtcaactttaactcagattatgtctatgatggaccaaccttaagagtggtccat 11968681  T
Q  104 catagatcctattcatatttttgatttaaacc 135  Q
    ||||||||||||| ||  |||| |||||||||    
T  11968682 catagatcctattaattattttaatttaaacc 11968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 49896561 - 49896443
Alignment:
Q  73 ctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatca 172  Q
    ||||||||||||||||| ||||||||||||   |||||||| || ||  |||| |||||||||||||||| ||||||||||||||| ||   ||||||||    
T  49896561 ctatggtggaccaacctaaagagtggtccactgtagatcctgttaattattttaatttaaaccgtttgatattttttattaaaagagaaccattagatca 49896462  T
Q  173 tgaatgtccgttgtatctt 191  Q
    || |||||  |||||||||    
T  49896461 tgcatgtctattgtatctt 49896443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 1588128 - 1588045
Alignment:
Q  10 tccctcatattttcctccgtataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaa 92  Q
    |||||||  ||||||||||| |||||||||||| ||||| ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  1588128 tccctcactttttcctccgtttaccaaataaattatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaa 1588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 6348226 - 6348369
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    ||||||| |||||  |||||||| || |  |||||||||  ||| |||||| |||||||  ||  ||||||||||||||||||||||||||||||||||     
T  6348226 ttttggttcctcactttttcctctgtttgtcaaataaattctgatggttaagtttaacctcaa--atgtctatggtggaccaaccttaagagtggtccac 6348323  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    | |||| | |||| |||||| | |||| |||| |||||||||||||    
T  6348324 cgtagaccttattaatatttctaattttaaccctttgatctttttt 6348369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 28590880 - 28590774
Alignment:
Q  74 tatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcat 173  Q
    ||||||| |||||| ||||||||| | |||||||||||||||| ||  |||| || ||||| |||||||||||||||||||||||  |  ||||||||||    
T  28590880 tatggtgaaccaactttaagagtgattcatcatagatcctattaattattttaatataaactgtttgatcttttttattaaaagagtaccgttagatcat 28590781  T
Q  174 gaatgtc 180  Q
    | |||||    
T  28590780 gcatgtc 28590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 52963637 - 52963743
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    ||||||||||||||||  |||| |||||| |  ||||||||||  ||| |||||||||||| | ||  ||||||||||||||||| |||||| |||||||    
T  52963637 atgttttggtccctcaagtttttctccgtttgtcaaataaatctcgactgttaactttaactccaa--atgtctatggtggaccagccttaaaagtggtc 52963734  T
Q  101 catcataga 109  Q
    |||||||||    
T  52963735 catcataga 52963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 19750300 - 19750195
Alignment:
Q  42 tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga 141  Q
    ||||||| |||||||||||||  ||  ||||||||||||||| || ||||| ||| ||||| ||||||||||||| ||  |||| ||||||| |||||||    
T  19750300 tcatgaccgttaactttaaccttaa--atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttga 19750203  T
Q  142 tctttttt 149  Q
    ||||||||    
T  19750202 tctttttt 19750195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 19789506 - 19789611
Alignment:
Q  42 tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga 141  Q
    ||||||| |||||||||||||  ||  ||||||||||||||| || ||||| ||| ||||| ||||||||||||| ||  |||| ||||||| |||||||    
T  19789506 tcatgaccgttaactttaaccttaa--atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttga 19789603  T
Q  142 tctttttt 149  Q
    ||||||||    
T  19789604 tctttttt 19789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 26629902 - 26630005
Alignment:
Q  43 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    ||||||||||||||||||||| ||  |||| ||||||| |||||| |||||||||||||| ||||| ||||||| ||  |||| || ||||| |||||||    
T  26629902 catgacggttaactttaaccccaa--atgtttatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgat 26629998  T
Q  143 ctttttt 149  Q
    |||||||    
T  26629999 ctttttt 26630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 52138799 - 52138686
Alignment:
Q  45 tgacggttaactttaaccc--aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    |||| ||||||||||||||  ||||| | |||||||| ||||||| |||||| ||||||| ||||||||||||| ||  || | ||||||||||||||||    
T  52138799 tgactgttaactttaacccctaaatg-tctctatggtagaccaactttaagaatggtccaccatagatcctattaattattctaatttaaaccgtttgat 52138701  T
Q  143 cttttttattaaaag 157  Q
     |||||| |||||||    
T  52138700 ttttttttttaaaag 52138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 13165633 - 13165718
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    ||||||||||||||||||||||||||||||| ||||||    ||| ||  |||| ||||||||||||||||||||||| ||||||||    
T  13165633 tctatggtggaccaaccttaagagtggtccaccatagacttcattaattattttaatttaaaccgtttgatctttttt-ttaaaaga 13165718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 4871629 - 4871704
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||| ||  |||| ||||||||| ||| ||||    
T  4871629 atgtctatggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaatttaaaccttttaatct 4871704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 23201917 - 23202055
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  ||||||||||| | |||||||||||   || ||||| |||||   ||||||||| ||||||||| || | ||||||||||| ||     
T  23201917 ttttggtccctcaccttttcctccgtttgccaaataaatcccaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtacac 23202016  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgat 142  Q
    ||||| ||||||| ||  |||| ||||  ||||||||||    
T  23202017 cataggtcctattaattattttaatttcgaccgtttgat 23202055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 42872258 - 42872169
Alignment:
Q  121 tttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacactt 211  Q
    ||||| ||||||||||||||||||||||||||||||||  || ||||||| ||| || ||   |||||||| | |||||||||||||||||    
T  42872258 ttttttatttaaaccgtttgatcttttttattaaaagaggatcgttagattatgcatatctactgtatctt-cagtgagtcaacaacactt 42872169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 10168829 - 10168745
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaac 87  Q
    ||||| |||||||| |||||||||||| | |||||||||| |||||| ||||||||||||||  |  |||||||||||||||||||    
T  10168829 gttttagtccctcacattttcctccgtttgccaaataaatccatgacagttaactttaaccccca-aatgtctatggtggaccaac 10168745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 42810243 - 42810115
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatag 108  Q
    |||||||| |||||||||||| | ||||||||||| |    ||||| ||||||||  | ||||||||||||| ||||| ||||||||| ||||| |||||    
T  42810243 gtccctcacattttcctccgtttgccaaataaatccttggtgttaagtttaaccccca-gatgtctatggtgaaccaatcttaagagtagtccaccatag 42810145  T
Q  109 atcctattcatatttttgatttaaaccgtt 138  Q
    | | |||| |  ||||| ||||||||||||    
T  42810144 accttattaaattttttaatttaaaccgtt 42810115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 22161708 - 22161596
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  22161708 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaagattgttagatcatgcatgtccactgtatcttactg 22161609  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  22161608 tgaaccaacaaca 22161596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 23317255 - 23317143
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  23317255 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 23317156  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  23317155 tgaaccaacaaca 23317143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 25922331 - 25922219
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  25922331 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 25922232  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  25922231 tgaaccaacaaca 25922219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 26496290 - 26496210
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  26496290 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttt 26496210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 40723362 - 40723442
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||| ||  |||  || | || |||||||||||||||    
T  40723362 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatgttaatcgtttgatctttttt 40723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 4714155 - 4714234
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
    |||||||||||||| ||||||||||||||||||| ||||||    ||| |||||||  |||| |||| ||||||||||||    
T  4714155 atgtctatggtggatcaaccttaagagtggtccaccatagacttcattaatattttaaattttaaccatttgatcttttt 4714234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 36845523 - 36845634
Alignment:
Q  45 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    ||||||| ||||||||||| ||  |||| |||| | ||||||| |||||||||||||| ||||| ||||||| ||  |||| || ||||| ||||||| |    
T  36845523 tgacggtcaactttaaccctaa--atgtttatgatagaccaacattaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatat 36845620  T
Q  145 tttttattaaaagat 159  Q
    ||||| |||||||||    
T  36845621 ttttt-ttaaaagat 36845634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 53432130 - 53432277
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggt 99  Q
    ||||||||||||||||  ||| ||| |||    ||||||||||  |||||||||| |||||||| ||  |||||||||||| |||||| ||||||||||     
T  53432130 atgttttggtccctcaagtttgccttcgttggtcaaataaatccctgacggttaagtttaaccccaa--atgtctatggtgaaccaactttaagagtggc 53432227  T
Q  100 ccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
     || |||| | | |||| || ||||  |||| ||||||||||||||||||    
T  53432228 tcaccatacaccttattaattttttcaattttaaccgtttgatctttttt 53432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 1587253 - 1587398
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt-aacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||  ||||||||||| | |||||||||||  || |||||||||| ||| | ||  |||||||| || ||||||| |||| |||| ||||    
T  1587253 ttttggtccctcactttttcctccgtttgccaaataaatcccgatggttaacttttaactctaa--atgtctatagtagaccaactttaaaagtgttcca 1587350  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    || || | | |||| || || || || | |||||||||||||||||||    
T  1587351 tcgtataccttattaattttgttaatcttaaccgtttgatctttttta 1587398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 22069370 - 22069437
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccg 136  Q
    ||||||||||||||| |||||||| |||||| || ||||||  ||||| |||||||| ||||| ||||    
T  22069370 atgtctatggtggacgaaccttaaaagtggttcaccatagactctattaatatttttaatttataccg 22069437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 36243663 - 36243742
Alignment:
Q  78 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    ||||||||| |||||||||| |||| ||||||| ||||| |  ||||| | || |||||||||||||||| | |||||||    
T  36243663 gtggaccaatcttaagagtgttccaccatagattctattgaattttttaactttaaccgtttgatcttttattttaaaag 36243742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 53435734 - 53435655
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
    ||||||||||| |||||||||||||||||||||| | ||||    ||| || ||||  |||| |||||||||||||||||    
T  53435734 atgtctatggtagaccaaccttaagagtggtccaccgtagacttcattaattttttaaattttaaccgtttgatcttttt 53435655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 56157468 - 56157389
Alignment:
Q  78 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    ||||||||| |||||||||| |||| ||||||||||||| || ||||| | || |||  ||||||||||| | |||||||    
T  56157468 gtggaccaatcttaagagtgttccaccatagatcctattaatttttttaactttaactatttgatcttttattttaaaag 56157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 390288 - 390346
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacc 62  Q
    |||||||||||||| | ||||||||| | ||||||||||| |||| ||||| |||||||    
T  390288 ttttggtccctcatttcttcctccgtttgccaaataaatcctgactgttaagtttaacc 390346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 2310993 - 2311051
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac 61  Q
    |||||||||||||| |||||||||||  | ||||||||||| | || ||||||||||||    
T  2310993 gttttggtccctcagattttcctccgattgccaaataaatcctaacagttaactttaac 2311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 8682829 - 8682756
Alignment:
Q  69 atgtctatggtggaccaac-cttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    ||||||||||||||| ||  |||||||||||||||||||||||| |||| || ||||| |||| |||| ||||||    
T  8682829 atgtctatggtggactaaatcttaagagtggtccatcatagatcatattaat-tttttaatttcaaccctttgat 8682756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 23103962 - 23103913
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 146  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||||||    
T  23103962 tggtccaccatagatcctattaat-tttttaatttaaaccgtttgatcttt 23103913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 33232743 - 33232662
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaac 87  Q
    ||||| |||||||| |||||||||||| | ||||||||||| |  | |||||||||||| |||   |||||||| ||||||||||    
T  33232743 gttttagtccctcacattttcctccgtttgccaaataaatcttttccgttaactttaactcaa---atgtctattgtggaccaac 33232662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 7708767 - 7708730
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcataga 109  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  7708767 tctatggtggaccaaccttaaaagtggtacatcataga 7708730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 42871165 - 42871222
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaa 60  Q
    ||||||||||||||  ||||||||||| | ||||||||||| |||| ||||| |||||    
T  42871165 gttttggtccctcactttttcctccgtttgccaaataaatcctgactgttaagtttaa 42871222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 13166750 - 13166670
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||| |||||||||| |||||||| |||| ||||||    ||| |||||||  |||| ||||||||||| ||||||    
T  13166750 atgtctatgatggaccaaccgtaagagtgatccaccatagaattcattaatattttaaattttaaccgtttgatatttttt 13166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 38555208 - 38555172
Alignment:
Q  121 tttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  38555208 tttttaatttaaaccgtttgatcttttttatttaaag 38555172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 6030516 - 6030306
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||| ||| |||||||||||||  | | |||||||||||   || |||||||||||||||||||||||||| ||||||||||||||||||||| || |    
T  6030516 gttttgatccttcatattttcctctatttgccaaataaatctcaacagttaactttaacccaaatgatgtctacggtggaccaaccttaagagtgatcta 6030417  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtca 202  Q
     ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |  |||| |||||| |||||   |||||||| || |||||||    
T  6030416 ccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagatgaacgttatatcatgcatgtctactgtatctt-ccatgagtca 6030318  T
Q  203 acaacacttaac 214  Q
    ||||||||||||    
T  6030317 acaacacttaac 6030306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 42641877 - 42641738
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaa 132  Q
    ||||||||||| | ||  |||| || ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||  |||| ||||||    
T  42641877 ccaaataaatcctcacaattaagttcaacccaaatgatgtctatggtgggccaaccttaagagtggtctaccatagatcctattaattattttaatttaa 42641778  T
Q  133 accgtttgatcttttttattaaaagataattgttagatca 172  Q
    || |||||||||||||| |||||||| ||| ||| |||||    
T  42641777 actgtttgatctttttttttaaaagagaatcgttggatca 42641738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 11317413 - 11317268
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  ||||||||||| |  |||||||||| | || ||||| |||||| ||||||||||||||||| |||||||||||||||||||| |     
T  11317413 ttttggtccctcaatttttcctccgtttggcaaataaatcctcacagttaagtttaactcaaatgatgtctatggtagaccaaccttaagagtggtctac 11317314  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||||||| ||  |||| ||||||| |||||| || |||||    
T  11317313 catagatcctattaattattttaatttaaatcgtttggtcattttt 11317268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 29219455 - 29219595
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||  ||||||||||| | |||||||||||   || ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  29219455 gttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtcc 29219554  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    | ||||||||||||| ||  |||| |||| |||||||||||    
T  29219555 accatagatcctattaattattttaatttcaaccgtttgat 29219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 29332754 - 29332894
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||  ||||||||||| | |||||||||||   || ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  29332754 gttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtcc 29332853  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    | ||||||||||||| ||  |||| |||| |||||||||||    
T  29332854 accatagatcctattaattattttaatttcaaccgtttgat 29332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 18617052 - 18616904
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||  ||||||||||| | |||||||||||   ||  |||| |||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  18617052 gttttagtccctcaccttttcctccgtttgccaaataaatcccaactattaagtttaaccccaaatgatgtctatggtggaccagtcttaaaagtggtcc 18616953  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    | ||||||||||||| ||  |||| |||| ||||||||||| |||||||    
T  18616952 accatagatcctattaattattttaatttcaaccgtttgatttttttta 18616904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 11547737 - 11547875
Alignment:
Q  11 ccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    ||||||| ||||||| ||| |  |||||||||| |||| ||||| |||||||| |||||||||||||  ||||||||||||| |||||||||| ||||||    
T  11547737 ccctcattttttccttcgtttgtcaaataaatcctgactgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccataga 11547836  T
Q  110 tcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    || |||| | |||| | |||||||||||||||||| ||||    
T  11547837 tcgtatt-aaatttataatttaaaccgtttgatctgtttt 11547875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 32469221 - 32469363
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    ||||||||| |||  ||||||||||| | ||||||||||| | |  ||||| |||||| ||||| |||| |||||||||||||| ||||||||||||||     
T  32469221 ttttggtccttcactttttcctccgt-tgccaaataaatccttatagttaagtttaactcaaattatgtatatggtggaccaactttaagagtggtccac 32469319  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
     |||||||||||| ||  |||| ||||||||| |||||| ||||    
T  32469320 tatagatcctattaattattttaatttaaaccctttgatatttt 32469363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 17459329 - 17459468
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    ||||||||  ||||||||||| | ||||||||||  ||||  |||| |||||||| |||||||||||||||||||| || ||||| |||| || | ||||    
T  17459329 gtccctcactttttcctccgtttgccaaataaattctgacttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtgatctaacata 17459428  T
Q  108 gatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    ||||||||| ||  || | |||||||||||||||| ||||    
T  17459429 gatcctattaattattataatttaaaccgtttgatttttt 17459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 1085432 - 1085290
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||||  |||||||||| | ||||||||||||  || ||||| |||||   ||||||||| ||||||||| || | ||||||||||| ||    
T  1085432 gttttggtccctcat--tttcctccgtttgccaaataaatcacaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtaca 1085335  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
     ||||||||||||| ||  |||| ||||  |||||||||| ||||    
T  1085334 ccatagatcctattaattattttaatttcgaccgtttgatttttt 1085290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 17460730 - 17460626
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||| |||||||||||| | |||||||||||  ||| ||||||||||||   ||  |||||||||||||||||| ||||| ||||||| |    
T  17460730 gttttggtccctcaaattttcctccgtttcccaaataaatcccgaccgttaactttaactttaa--atgtctatggtggaccaatcttaaaagtggtcta 17460633  T
Q  103 tcataga 109  Q
    || ||||    
T  17460632 tcgtaga 17460626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 34513534 - 34513444
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    |||| |||||| ||||||||||||||||| |||| |||||| | |||| || ||||| |||||||||||||||||| |||| | |||||||    
T  34513534 atgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaaccgtttgatctgttttttaaaaagat 34513444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 43033153 - 43033282
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  ||||||||||| | ||||||||||| |    ||||| |||||||  ||  ||||||||||| ||||||||||||||||||||||     
T  43033153 ttttggtccctcactttttcctccgtttgccaaataaatcctcgatgttaagtttaacctcaa--atgtctatggtagaccaaccttaagagtggtccac 43033250  T
Q  104 catagatcctattcatatttttgatttaaacc 135  Q
    |||| | |||||| ||  |||| |||||||||    
T  43033251 cataaaccctattaattattttaatttaaacc 43033282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 8320895 - 8320981
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||| ||||||||| |||||| |||||||  |||| ||  |||| ||||||||||||||||  ||||| ||||||||    
T  8320895 tctatggtggaccatccttaagagcggtccaccatagattatattaattattttaatttaaaccgtttgattgttttttttaaaaga 8320981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 40323095 - 40323207
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||| | |||||||| | |    
T  40323095 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtcggctgtatcttactg 40323194  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  40323195 tgaaccaacaaca 40323207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 43034516 - 43034404
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  ||||||||||| |  |||||||||| |  | ||||| |||||||      |||||||||||||| |||| ||||||||||||||     
T  43034516 ttttggtccctcactttttcctccgtttgtcaaataaatcttcgctgttaagtttaacctctcaaatgtctatggtggatcaactttaagagtggtccac 43034417  T
Q  104 catagatcctatt 116  Q
    |||||||||||||    
T  43034416 catagatcctatt 43034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 30748621 - 30748703
Alignment:
Q  76 tggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    ||||| || ||||||||||||||  || |||||||| |||| ||  |||| |||||||  |||||||||||||||||||||||    
T  30748621 tggtgaacaaaccttaagagtggcacaccatagatcatattaattattttaatttaaattgtttgatcttttttattaaaaga 30748703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 34464039 - 34464178
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||||||| |||  ||| |||||||  | ||||||||||  |||| ||||| |||||||| ||  |||||||| || ||||||||||||||||||||||    
T  34464039 ttttggtccatcaggtttgcctccgttaatcaaataaatctctgactgttaagtttaaccccaa--atgtctatcgttgaccaaccttaagagtggtcca 34464136  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
     |||||| | ||||    ||||| |||||||| |||||||||    
T  34464137 ccatagaccttattagattttttaatttaaactgtttgatct 34464178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 4921039 - 4920958
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    ||||||||||| ||||||| |||| | ||||||| |||| |||||||| ||  || | |||||||||||||||| |||||||    
T  4921039 atgtctatggtagaccaactttaaaaatggtccaccataaatcctattaattattctaatttaaaccgtttgatttttttta 4920958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34512882 - 34513034
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    |||||||| ||||||| |||| |||||||    ||||||||||||||| ||||| |||||||    | |||| ||||||||| ||||| |||||||||||    
T  34512882 atgttttgatccctcaaatttgcctccgttagtcaaataaatcatgactgttaagtttaacc---ttaatgtatatggtggatcaaccataagagtggtc 34512978  T
Q  101 catcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaa 156  Q
    || |||| | | |||| |  ||||| ||||||||  |||||| | |||| ||||||    
T  34512979 caccatataccttattaaattttttaatttaaactatttgatttgtttttttaaaa 34513034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 2384442 - 2384330
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||| ||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  2384442 tggtccactatagatcctattattttttttaatataaactgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 2384343  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  2384342 tgaaccaacaaca 2384330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 16295191 - 16295151
Alignment:
Q  76 tggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  16295191 tggtggaccaaccttaacagtggtccaccatagatcctatt 16295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 28611233 - 28611154
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||| || |||| | |||||||  |||||||||||| || | ||| |||||||||||||||| ||||||    
T  28611233 atgtctatggtggaccgactttaaaaatggtccactatagatcctattaat-tatttaatttaaaccgtttgatttttttt 28611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 34467641 - 34467721
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||| ||||| |||||||||||||||||| |||| | | |||| |  ||||| |||||||| ||||||| ||||||    
T  34467641 atgtctatgatggacaaaccttaagagtggtccaccataaaccttattaagttttttaatttaaactgtttgatatttttt 34467721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 36215124 - 36215013
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  |||||||||||| || ||||| || ||||||||||||||||||||| |||   |  |||||||||||||| ||||||  |||||||| | |    
T  36215124 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcttttttaataatgaaggattgttagatcatgcatgtccactgtatcttactg 36215026  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  36215025 tgaaccaacaaca 36215013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 7437806 - 7437727
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggac 83  Q
    |||||||||||||  ||||||||||| ||| ||||||||| | ||  |||| |||||||||||| || |||||| |||||    
T  7437806 ttttggtccctcaatttttcctccgtttacaaaataaatcctaacaattaagtttaacccaaataatatctatgatggac 7437727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 35903665 - 35903720
Alignment:
Q  92 agagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    ||||||||||| ||||||||||||| |   |||| |||||||||||||||||||||    
T  35903665 agagtggtccaccatagatcctattaaatattttaatttaaaccgtttgatctttt 35903720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 30749305 - 30749194
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt-attaaaagataattgtta 167  Q
    |||||||||||  |||||||||||||||||| ||  | ||  |||||| ||  |||| ||||||||||| ||||||||||| |||||||||  |  ||||    
T  30749305 atgtctatggta-accaaccttaagagtggttcactacagggcctattaattattttaatttaaaccgtatgatcttttttgattaaaagaggaccgtta 30749207  T
Q  168 gatcatgaatgtc 180  Q
    ||||||| |||||    
T  30749206 gatcatgcatgtc 30749194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 54231 - 54083
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    |||||||||||||| |||||||||||| | ||||||||||| |||| ||||| | |||||| ||||||||||||||||||||||||||||| ||||||||    
T  54231 gttttggtccctcaaattttcctccgtttgccaaataaatcgtgactgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtcc 54132  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    | ||||||||||||| ||  |||| |||||||| ||||||| |||||||    
T  54131 accatagatcctattaattattttaatttaaactgtttgatttttttta 54083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 52662 - 52749
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaa 92  Q
    |||||||||||||| ||||| |||||| | |||||||||||  ||| ||||||||||||   ||  |||| |||||||||||||||||||    
T  52662 gttttggtccctcagatttttctccgtttgccaaataaatcccgacagttaactttaactttaa--atgtatatggtggaccaaccttaa 52749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 10732175 - 10732036
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| |||||||| |||||||||||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  10732175 gttttagtccctcacattttcctccgtttaccaaataaattccgacggttaagtttaacccaaatgatgtctatggtggaccaacctttagagcggtcca 10732076  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
     ||||||||||||| ||  |||| ||||  ||||||||||    
T  10732075 ccatagatcctattaattattttaatttcgaccgtttgat 10732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 38242561 - 38242417
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  ||||  || || | ||||||||||| | || ||||| |||||| ||||||||||||||||||||||||||||||||||||||||     
T  38242561 ttttggtccctcacttttttatctgtttgccaaataaatcctcacagttaagtttaactcaaatgatgtctatggtggaccaaccttaagagtggtccac 38242462  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatcttttt 148  Q
    |||| || ||||| ||  |||| |||||||||||||||| |||||    
T  38242461 cataaattctattaattattttaatttaaaccgtttgattttttt 38242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 35371020 - 35371132
Alignment:
Q  46 gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 145  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||  |||| |||| |||  |||||| ||    
T  35371020 gacggttaagtttagcccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactttttgatttt 35371119  T
Q  146 ttttattaaaaga 158  Q
    |||| | ||||||    
T  35371120 ttttttaaaaaga 35371132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 12108028 - 12107874
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacgg---ttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggt 99  Q
    |||||||||||||  ||||||||||| | ||||||||   || ||||   |||| |||||||| ||||||| | ||||||||||||||||||| ||||||    
T  12108028 ttttggtccctcactttttcctccgtttgccaaataataaatcacgggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggt 12107929  T
Q  100 ccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaa 155  Q
    ||| |||||| ||||||  | ||||| || ||||||||||||||||||||||||||    
T  12107928 ccaccatagaccctatt-ttttttttaatataaaccgtttgatcttttttattaaa 12107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 3208554 - 3208693
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    |||||| ||||| || ||||||||||| |  |||||||||| | || ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||    
T  3208554 gttttgatcccttattttttcctccgtttgtcaaataaatccttaccgttaagtttaaccccaaatgatat-tatggtggaccaaccttaagagtggtcc 3208652  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    | |||| |||||||| ||  || | ||||||||||||||||    
T  3208653 accataaatcctattaattattataatttaaaccgtttgat 3208693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 53622733 - 53622830
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    ||||| ||||| | |||||||||||| | |||| ||||||   |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  53622733 ttttgatcccttagattttcctccgtttgccaactaaatcccaacggttaagtttaaccccaaatgatgtctatggtggaccaaccttaagagtggtc 53622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 26886402 - 26886488
Alignment:
Q  63 caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||| || |||| ||||||||||||||||||||| |||| |||||||| ||  |||| |||||||||||||||| ||||||    
T  26886402 caaatgatgtttacggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaaaccgtttgatttttttt 26886488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 42684946 - 42685101
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcat-gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||| |||| ||  || ||||||||||||| | ||| ||||| |||||||| ||  |||||||||||| ||||| ||||||||||||||    
T  42684946 gttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaagtttaaccccaa--atgtctatggtgaaccaagcttaagagtggtcc 42685043  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    | |||| | | |||| |  ||||| |||||||||||||||||| |||| | |||||||    
T  42685044 accataaaccttattaaattttttaatttaaaccgtttgatctgttttttaaaaagat 42685101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 10301072 - 10301155
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaa 155  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||| ||  |||| |||||||| ||||||| |||||| |||||    
T  10301072 tctatggtgaaccaaccttaagagtgatccaccatagatcctattaattattttaatttaaactgtttgatttttttttttaaa 10301155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 34819273 - 34819218
Alignment:
Q  61 cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  34819273 cccaaatgatgtctatagtggatcaaccttaagagtggtccaccatagatcctatt 34819218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 14745205 - 14745106
Alignment:
Q  43 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    |||||| || ||||||||||| ||  || ||| |||||||||||||||||||||||| || ||||||||||||| ||  |||| |||||||| |||||||    
T  14745205 catgaccgtcaactttaaccccaa--atatctgtggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtttgat 14745108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 27841710 - 27841645
Alignment:
Q  49 ggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatccta 114  Q
    |||||| ||||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  27841710 ggttaagtttaatctaaattatgtttatggtggaccaaccttaagagtggtccaccatagatccta 27841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 48083343 - 48083501
Alignment:
Q  48 cggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 147  Q
    |||||||||||||||  ||  |||||||||||| || |||||||||||||||| | ||||||||||||| ||  |||| ||||||||| || ||||| |     
T  48083343 cggttaactttaaccacaa--atgtctatggtgcactaaccttaagagtggtctaccatagatcctattaattattttaatttaaaccattcgatctata 48083440  T
Q  148 ttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaaca 208  Q
    || | ||| ||  | |||| ||||||||| |||| |||||||||   ||||||||| ||||    
T  48083441 ttttaaaatgaggactgttggatcatgaaggtccattgtatcttattgtgagtcaaaaaca 48083501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 3807945 - 3807834
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  |||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| |||||| ||||||||| | |    
T  3807945 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccattgtatcttactg 3807847  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  3807846 tgaaccaacaaca 3807834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 28909561 - 28909477
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtc 180  Q
    ||||||| ||||||||||||| || ||||| |||||||| | |||||||||||||||||||||  |  ||||||||||| |||||    
T  28909561 tggtccaccatagatcctattaatttttttaatttaaactggttgatcttttttattaaaagaggacggttagatcatgcatgtc 28909477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 53614319 - 53614208
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||||||| |||||||||  | | |||||||||||  | || |||| |||||||| |||| |||||||||||||| || |||||||||||||||    
T  53614319 gttttagtccctcacattttcctctatttgccaaataaatccaggcg-ttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtcc 53614221  T
Q  102 atcatagatccta 114  Q
    | |||||||||||    
T  53614220 accatagatccta 53614208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 41264699 - 41264553
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||| |||||||  |||| |||||| | |||||||||||   || ||||| |||||   ||||||||| ||||||||| || | ||||||||||| ||    
T  41264699 gttttgatccctcacctttttctccgtttgccaaataaatctcaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtaca 41264600  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
     ||||||||||||| ||  |||| ||||  |||||||||| ||||||    
T  41264599 ccatagatcctattaattattttaatttcgaccgtttgatttttttt 41264553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3455673 - 3455558
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc---aaatgatgtctatggtggaccaaccttaagagtg 97  Q
    |||||||||||| |||| |||  ||||||    |||||||||| |||| ||||||||||||||   |||  |||| ||||||||||||||||||||||||    
T  3455673 atgttttggtccttcatgtttgtctccgtcagtcaaataaatcctgacagttaactttaaccccccaaa--atgt-tatggtggaccaaccttaagagtg 3455577  T
Q  98 gtccatcatagatcctatt 116  Q
    ||||| |||||||| ||||    
T  3455576 gtccaccatagatcatatt 3455558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 10338872 - 10338953
Alignment:
Q  68 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||  || ||||||||||||||||||||| ||||||||||||| ||  |||| |||| ||| ||||||| ||||||    
T  10338872 gatgtctataatgaaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactgtttgatttttttt 10338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 7270458 - 7270546
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    |||||| | ||||||||||||||||||||||| | |||||||| |||| |  ||||||| || ||| |||||||||||| | |||||||    
T  7270458 atgtctgtagtggaccaaccttaagagtggtctaccatagatcttattaacttttttgactttaactgtttgatcttttgttttaaaag 7270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 44175728 - 44175840
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  44175728 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 44175827  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  44175828 tgaaccaacaaca 44175840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 33705349 - 33705444
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatctt 191  Q
    |||||||  ||||||||||||  ||||||| || ||||||||||||||||||||| ||||  |  ||| |||||||||| ||||||  ||||||||    
T  33705349 tggtccactatagatcctattattatttttaatataaaccgtttgatcttttttaataaagaaagattattagatcatgcatgtccactgtatctt 33705444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 11224817 - 11224776
Alignment:
Q  75 atggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  11224817 atggtggaccaaccttaagagtggtccaccatagatcatatt 11224776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 18197218 - 18197275
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac 61  Q
    |||||||||||||| ||||||||||| | |||||||||||  ||| ||||||||||||    
T  18197218 ttttggtccctcattttttcctccgtttgccaaataaatccagaccgttaactttaac 18197275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 26887595 - 26887497
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatag 108  Q
    ||||||||| |||||||| || | ||||||||||  |||||||||||||||||   ||  || ||||||||| ||||||||||| ||||||| ||| |||    
T  26887595 gtccctcatcttttcctctgtttcccaaataaattctgacggttaactttaacttcaa--atatctatggtgtaccaaccttaaaagtggtctatcgtag 26887498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 10730956 - 10731057
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    ||||||||| |||  |||| |||||| | |||||||||||  ||| ||||||||||||   ||  |||||||||||| ||||||||||| ||||||| ||    
T  10730956 ttttggtccttcacttttttctccgtttgccaaataaatcccgactgttaactttaacttcaa--atgtctatggtgaaccaaccttaaaagtggtctat 10731053  T
Q  104 cata 107  Q
    ||||    
T  10731054 cata 10731057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 49379837 - 49379917
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||| ||||||| ||||||    
T  49379837 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaactgtttgatatttttt 49379917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 36175333 - 36175509
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||| |||||| |||| |||||| | |||||||||||  ||| ||||| |||||||| ||  ||||||||| |||| |||| |||    | |||||    
T  36175333 gttttggtgcctcatttttttctccgtttgccaaataaatccggactgttaagtttaaccccaa--atgtctatgatggatcaacattatatatagtcca 36175430  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtcc 181  Q
     |||| |||||||| || | ||| ||||||||| || ||| ||||||   ||||||| | |||| ||||||||| ||||    
T  36175431 ccatatatcctattaatttctttaatttaaaccattcgatttttttttaaaaaagatgagtgttggatcatgaaggtcc 36175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 37981627 - 37981533
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatctt 191  Q
    |||||||  |||||||||||| || ||||| || |||||||||||||| |||||| ||||  |  |||||||||||||| ||||||  ||||||||    
T  37981627 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcctttttaataaagaaggattgttagatcatgcatgtccactgtatctt 37981533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 53420452 - 53420527
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 144  Q
    ||||||||||||||||||| |||| |||| |||| |||||| | |||| |  ||||| |||||||| |||||||||    
T  53420452 atgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaatttaaactgtttgatct 53420527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 44182426 - 44182511
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtcc 181  Q
    |||||||  ||||||||||||  | ||||| || ||||| ||||||||||||||| ||||  |  |||||||||||||| ||||||    
T  44182426 tggtccactatagatcctattattttttttaatataaactgtttgatcttttttaataaagaaggattgttagatcatgcatgtcc 44182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 53194590 - 53194513
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||| ||| || ||||| |||| |||| ||||||| ||||| ||  ||||  ||||||||||||||||||||||    
T  53194590 tctatggtagacaaatcttaaaagtgatccaccatagattctattaattattttattttaaaccgtttgatctttttt 53194513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 13621055 - 13621135
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||| || | || | ||||||| ||||||||||||| ||  || | ||||||||||||| || ||||||    
T  13621055 atgtctatggtggaccgacttaaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttaatttttttt 13621135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 6e-35; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 15232822 - 15232976
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| |||||||| ||||||||| || | |||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||| |||| |||||||||    
T  15232822 gttttagtccctcacattttcctctgtttgccaaataaatcatgaccgttaagtttaacccaaatgatgtatatagtggaccaactttaaaagtggtcca 15232921  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||| ||  |||| || | ||||||||||| |||||| ||||||||    
T  15232922 tcatagatcctattaattattttaatatcaaccgtttgatatttttt-ttaaaaga 15232976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 45585054 - 45584915
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||||||| |||  ||||||||||| | ||||||||||| |||| ||||| ||||| ||||||||||||||||||||| ||||| ||||||||| ||||    
T  45585054 ttttggtccttcactttttcctccgtttgccaaataaatcctgaccgttaagtttaaacccaaatgatgtctatggtggcccaactttaagagtgctcca 45584955  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
     ||||||||||||| ||  |||| || |||| ||||||||    
T  45584954 ccatagatcctattaattattttaatataaatcgtttgat 45584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 12665944 - 12666064
Alignment:
Q  88 cttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgta 187  Q
    ||||||||||||||| |||||||| |||| || || || |||||||||||||||||||||||| |||||||||| |||||||||||| ||||   |||||    
T  12665944 cttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgatcttttttaataaaagataaatgttagatcatgtatgtttattgta 12666043  T
Q  188 tcttcccgtgagtcaacaaca 208  Q
    |||| |  ||| |||||||||    
T  12666044 tcttacaatgaatcaacaaca 12666064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 16965173 - 16965035
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||||| | |||||| ||||| || |||||||||   || |||||| |||||||| ||||||||| |||||||||||||| |||||||||||||    
T  16965173 gttttagtcccttacattttcttccgtttatcaaataaattccgatggttaagtttaaccccaaatgatgtatatggtggaccaactttaagagtggtcc 16965074  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttg 140  Q
    | ||||||||||||| ||  |||| |||| |||||||||    
T  16965073 accatagatcctattaattattttaatttcaaccgtttg 16965035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 9226196 - 9226107
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||| ||  |||| |||||||  |||||||||||||||||||||||    
T  9226196 atgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttaaattgtttgatcttttttattaaaaga 9226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 15072835 - 15072682
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatc-atgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||||||||| || ||||||||||| | ||||||||||| ||| | |||||||||||||  ||  ||||||||||||||||||||| ||||||||||||    
T  15072835 ttttggtcccttattttttcctccgtttgccaaataaatccatgtctgttaactttaacctcaa--atgtctatggtggaccaacctaaagagtggtcca 15072738  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatctt-ttttattaaaag 157  Q
     | ||||  ||||| || || || |||||||  |||||||||| ||||||||||||    
T  15072737 ccgtagactctattaattttcttaatttaaattgtttgatctttttttattaaaag 15072682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 46110353 - 46110496
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||| ||||  |||| |||||| | | |||||||||  ||| |||||||||||| | ||  || ||||||||||||||||||||||||||||||||    
T  46110353 ttttggtcactcaagtttttctccgtttgctaaataaatctcgactgttaactttaactctaa--atatctatggtggaccaaccttaagagtggtccat 46110450  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    | |||| | |||| || || || |||| ||||||||||||||||||    
T  46110451 cgtagaccttattaattttgttaattttaaccgtttgatctttttt 46110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 50444743 - 50444590
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||| ||||||||||  | |||||||||||   || |||||||||||| |||||  | ||||||| |||||||||||||||||| |||||    
T  50444743 ttttggtccctcattttttcctccgattgccaaataaatccaaaccgttaactttaactccaaa--acgtctatgttggaccaaccttaagagt-gtcca 50444647  T
Q  103 tcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    || |||| | |||| || || || |||| |||||||||||||||| | |||||||||    
T  50444646 tcgtagaccttattaattttgttcattttaaccgtttgatcttttgttttaaaagat 50444590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 16963903 - 16964008
Alignment:
Q  2 tgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    |||||| ||||||||| ||||||||||| | ||||||||||  |||| |||||||||||| | ||  |||| |||| |||||||||||||| ||||||||    
T  16963903 tgttttagtccctcatcttttcctccgtttgccaaataaatgctgactgttaactttaactctaa--atgtttatgatggaccaaccttaaaagtggtcc 16964000  T
Q  102 atcataga 109  Q
    ||||||||    
T  16964001 atcataga 16964008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 27814363 - 27814462
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt-aacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||| |||||||| || | |||||||||||  ||||||||||||| ||| | ||  ||||||||||||||||||| |||| |||||||||    
T  27814363 ttttggtccctcattttttcctctgtttgccaaataaatcccgacggttaacttttaactctaa--atgtctatggtggaccaactttaaaagtggtcca 27814460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 6049406 - 6049317
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||||||| || || ||||||||| | |||||||| || ||  |||| |||||||||| ||||| |||||||||||||||    
T  6049406 atgtctatggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaatttaaaccgattgatattttttattaaaaga 6049317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 52078125 - 52078044
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||| ||  |||| |||| ||||||||||| |||||||    
T  52078125 atgtctatggtgaaccaaccttaagagtgatacaccatagatcctattaattattttaattttaaccgtttgatttttttta 52078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 13147397 - 13147333
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaa 133  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||| |||||||    
T  13147397 atgtctatggtggaccaaccttaatagtggtccaccatagatcctattaattattttaatttaaa 13147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 15746747 - 15746668
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||| ||  |||| |||| |||| |||||||| ||||    
T  15746747 atgtctatggtggaccaatcttaagagtggtccaccatagatcctattaat-cttttaattttaaccctttgatctatttt 15746668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 18821720 - 18821632
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 157  Q
    ||||||||||||||| |||||||||||||||| | || |||||||||| || ||||  | || |||||||||||||||| | |||||||    
T  18821720 atgtctatggtggactaaccttaagagtggtctaccaaagatcctattaattttttaaaatttaaccgtttgatcttttgttttaaaag 18821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 34350240 - 34350288
Alignment:
Q  61 cccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34350240 cccaaatgatgtctatggtggatcaaccttaagagtggtccaccataga 34350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 48527669 - 48527749
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||||| ||||||| |||||||||||||| |||||||| |||  ||  |||| |||||||| ||||||||||||||    
T  48527669 atgtctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtttgatctttttt 48527749  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 35943428 - 35943347
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt--aaaccgtttgatctttttt 149  Q
    ||||||||||||||||||||||||||||| |||| |||||| | |||| | |||||| ||||  |||||||||||||||||||    
T  35943428 atgtctatggtggaccaaccttaagagtgatccaccatagaccttatt-aaattttttattttaaaaccgtttgatctttttt 35943347  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 49802941 - 49802837
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| ||||||||| |||| |||||| | |||||||||||  |||||||||||| ||| | ||  |||||||||||| ||||||||||| ||||||| |    
T  49802941 gttttagtccctcatctttttctccgtttgccaaataaatcccgacggttaacttcaactctaa--atgtctatggtgtaccaaccttaaaagtggtcta 49802844  T
Q  103 tcataga 109  Q
    || ||||    
T  49802843 tcgtaga 49802837  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 28050465 - 28050539
Alignment:
Q  78 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttatt 152  Q
    ||||||||| |||||||||| |||| ||||||||||||| || || || | || |||||||||||||||||||||    
T  28050465 gtggaccaatcttaagagtgttccaccatagatcctattgattttcttaactttaaccgtttgatcttttttatt 28050539  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 26802075 - 26802164
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    ||||||| |||| ||||||||||||||| |||||  ||||||| |||| ||  |||| ||||||||||||||||  ||||| ||||||||    
T  26802075 atgtctaaggtgaaccaaccttaagagttgtccactatagatcatattaatcattttaatttaaaccgtttgattattttttttaaaaga 26802164  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 41873952 - 41873875
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 146  Q
    |||||||||||||||||||||||||||||||||| ||||||    ||| || ||||  |||| |||||||||||||||    
T  41873952 atgtctatggtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatcttt 41873875  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 51445725 - 51445806
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    |||||||||||||| |||| |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| |||||||    
T  51445725 atgtctatggtggatcaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttta 51445806  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 14478401 - 14478481
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  14478401 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttt 14478481  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 48097013 - 48096933
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||| ||  |||  || | || |||||||||||||||    
T  48097013 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatattaatcgtttgatctttttt 48096933  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 49801717 - 49801832
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattta 131  Q
    |||||||||||  ||| ||||| ||||||| |||||||||| || |||  ||||||||||| ||||||||| |||| || ||||| ||  |||| |||||    
T  49801717 ccaaataaatcc-gactgttaattttaacctcaaatgatgtttacggtaaaccaaccttaaaagtggtccaccataaattctattaattattttaattta 49801815  T
Q  132 aaccgtttgatcttttt 148  Q
    ||||||||||| |||||    
T  49801816 aaccgtttgattttttt 49801832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 3617478 - 3617431
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||    
T  3617478 atgtctatggtgaaccaaccttaagagtggtccactatagatcctatt 3617431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 8027403 - 8027506
Alignment:
Q  105 atagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaac 204  Q
    ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | ||||  ||||    
T  8027403 atagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactgtgaaccaac 8027502  T
Q  205 aaca 208  Q
    ||||    
T  8027503 aaca 8027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 10722354 - 10722291
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaacc 135  Q
    |||||| ||||||||||| |||||||||||||||||||| ||| | || ||||| |||||||||    
T  10722354 tctatgatggaccaacctaaagagtggtccatcatagattctactaatttttttaatttaaacc 10722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 35246008 - 35246083
Alignment:
Q  347 ttgactattaacatgaaaattgatgtaaagtcctcttagttgaaaattatttgaagccaatcattggacattgaca 422  Q
    ||||||| | |||||||||||||| |||||| ||||||| |||| || || | |||||||| ||||||||||||||    
T  35246008 ttgactactcacatgaaaattgatttaaagttctcttagctgaagatcatgtaaagccaattattggacattgaca 35246083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 13894752 - 13894828
Alignment:
Q  72 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||| |||||||| |||||| ||| | |||||||||| || ||  |||| |||||||||||||||||||||||    
T  13894752 tctatggtg-accaacctaaagagttgtctaccatagatcctgttaattattttaatttaaaccgtttgatctttttt 13894828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 44999443 - 44999367
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 145  Q
    |||||||||||||||||| | |||||||||| || |||||||| |||| ||  |||| | ||||||| |||||||||    
T  44999443 atgtctatggtggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaaccatttgatctt 44999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15071410 - 15071452
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatc 43  Q
    ||||||||||||||||  ||||||||||| |||||||||||||    
T  15071410 atgttttggtccctcactttttcctccgtttaccaaataaatc 15071452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 34351943 - 34351866
Alignment:
Q  71 gtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||||||||||| |||||||||||||| |||| | | |||| |||||| | |||| |||| |||| ||||||||    
T  34351943 gtctatggtggaccaac-ttaagagtggtccaccataaaccttattaatatttctaattttaaccctttggtctttttt 34351866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 46467281 - 46467370
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    ||||||||||||||||||| |||| |||| |||| | |||||  |||| | |||||| |||||||||||||||| | |||| | |||||||    
T  46467281 atgtctatggtggaccaacattaaaagtgatccaccgtagatgttatt-aaatttttaatttaaaccgtttgatatattttctaaaaagat 46467370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 5613082 - 5612993
Alignment:
Q  50 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    |||||||||||||| ||  |||| ||||||||| || | |||| |||| |||| ||||||||||||| ||  |||| ||||||||||||||||    
T  5613082 gttaactttaaccccaa--atgtttatggtggatcacctttaa-agtgatccaccatagatcctattaattattttaatttaaaccgtttgat 5612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 46318576 - 46318519
Alignment:
Q  92 agagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||||||||||| ||||||||||||| |   |||| ||||||| |||||||||||||||    
T  46318576 agagtggtccaccatagatcctattaaatattttaatttaaatcgtttgatctttttt 46318519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 9482574 - 9482637
Alignment:
Q  50 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    |||||||||||||||||||   ||||  |||||||||| ||||||||||| || |||||||| ||||    
T  9482574 gttaactttaacccaaatg---tctacagtggaccaactttaagagtggttcaccatagatcttatt 9482637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 14470993 - 14471029
Alignment:
Q  71 gtctatggtggaccaaccttaagagtggtccatcata 107  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  14470993 gtctatagtggaccaaccttaagagtggtccaccata 14471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 23091487 - 23091527
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcataga 109  Q
    ||||||||||||||||||| |||| ||||||||| ||||||    
T  23091487 atgtctatggtggaccaactttaaaagtggtccaccataga 23091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 24499701 - 24499661
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatc 43  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  24499701 gttttggtccctcactttttcctccgtttaccaaataaatc 24499661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 43615 - 43473
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaa-tgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    ||||||||  ||||||||||| | |||||||| || |||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||| ||||    
T  43615 gtccctcactttttcctccgtttgccaaataagtcctgacggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccata 43516  T
Q  108 gatcctattcatatttttgatttaaaccgtttgatctttttta 150  Q
    ||||||||| ||  |||| |||||||||||||||| |||||||    
T  43515 gatcctattaattattttaatttaaaccgtttgatttttttta 43473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 7311741 - 7311626
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaa 132  Q
    ||||||||||| | || ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||  |||| ||||||    
T  7311741 ccaaataaatcctcacagttaagtttaatccaaatgatgtctatggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaa 7311642  T
Q  133 accgtttgatcttttt 148  Q
    |||||||||| |||||    
T  7311641 accgtttgattttttt 7311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 17837686 - 17837825
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||   || ||||| |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  17837686 gttttagtccctcatcttttcttccgtttaccaaataaatcca-acagttaagtttaaccccaaatgatgtctatggtggacaaacattaagagtggtcc 17837784  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    | ||||||||||||| ||  |||| |||| |||||||||||    
T  17837785 accatagatcctattaattattttaatttcaaccgtttgat 17837825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 29381776 - 29381630
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    ||||| |||| |||| ||||||||||| |||||||||||||   || ||||| |||||||| ||||||||||| |||||||| ||||||||||||| |||    
T  29381776 gttttagtccttcatcttttcctccgtttaccaaataaatcca-acagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatcc 29381678  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    | ||||||||||||| ||  |||| |||| ||||||||||| ||||||    
T  29381677 accatagatcctattaattattttaatttcaaccgtttgatttttttt 29381630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 5187638 - 5187555
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 116  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| || |||||||||||||    
T  5187638 ccaaataaatcctgacggttaagtttaacccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctatt 5187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 23392290 - 23392443
Alignment:
Q  9 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcata 107  Q
    ||||||||  ||||||||||| | ||||||||||| | |  ||||| |||||||| |||||||| ||| |||||| ||||||||| ||||||||| ||||    
T  23392290 gtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccata 23392388  T
Q  108 gatcctattcatatttttgatttaaaccgtttgat-cttttttattaaaagataa 161  Q
    ||||||||| ||  |||| |||| |||||||||||  |||||| |||||||||||    
T  23392389 gatcctattaattattttaatttcaaccgtttgatattttttttttaaaagataa 23392443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 18346766 - 18346650
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattta 131  Q
    |||||||||||  ||| ||||| ||||||| |||||||||| || |||| |||||||||||||||||||||  ||| |||||||| ||  |||| |||||    
T  18346766 ccaaataaatcc-gactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccactataaatcctattaattattttaattta 18346668  T
Q  132 aaccgtttgatctttttt 149  Q
    ||||||||||| ||||||    
T  18346667 aaccgtttgatttttttt 18346650  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 11967351 - 11967424
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    |||||||| ||||||||||||| |||| ||||||||||||||| |||| ||  |||| |||||||| |||||||    
T  11967351 atgtctattgtggaccaaccttgagaggggtccatcatagatcatattaattattttaatttaaactgtttgat 11967424  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 11722921 - 11723001
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  11722921 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttt 11723001  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 12669858 - 12669938
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||  | || || || |||||  |||||||||||||    
T  12669858 atgtgtatggtggaccaaccttaagagtggtccaccatagatcatattatttttattaatataaactatttgatctttttt 12669938  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 32507073 - 32506976
Alignment:
Q  2 tgttttggtccctcatattttcctccgtataccaaataaatcat-gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 100  Q
    |||||| |||||||| ||||| ||| || | ||||||||||| | ||| ||||| |||||||| ||  || |||||||||||||||||||||||||||||    
T  32507073 tgttttagtccctcacatttttctcagtttgccaaataaatccttgactgttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtc 32506976  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 23397400 - 23397303
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    ||||| ||||||||  ||||||||||| | |||||||||||  ||| ||||| ||||||   ||  |||||||||||||||||||||||| ||| |||||    
T  23397400 gttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaaaagtagtcca 23397303  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 13847866 - 13847764
Alignment:
Q  105 atagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaac 204  Q
    |||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  ||| |||||||||| ||||||  |||||||| | ||||  ||||    
T  13847866 atagatcctatt-atttttttaatataaaccgtttgatcttttttaataaagaaggatttttagatcatgcatgtccactgtatcttactgtgaaccaac 13847768  T
Q  205 aaca 208  Q
    ||||    
T  13847767 aaca 13847764  T

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Target: scaffold0031 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 124040 - 124194
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 103  Q
    |||||||||||||  |||||||| || | ||||||||||| | |||||||| |||||||| ||  || |||||||||||||||||||||||||||||||     
T  124040 ttttggtccctcactttttcctctgtttgccaaataaatccttacggttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtccac 124137  T
Q  104 catagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataa 161  Q
    |||||||| |||| | ||| || ||||||| |||||||||| |||| | |||||||||    
T  124138 catagatcgtatt-aaattgttaatttaaatcgtttgatctattttttaaaaagataa 124194  T

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Target: scaffold0031; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 125278 - 125137
Alignment:
Q  4 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcca 102  Q
    |||||||||||||  ||||||||||| | ||||||||||| | |||||||| |||||||| ||||||||| |||| |||||||||||||| |||||||||    
T  125278 ttttggtccctcactttttcctccgtttgccaaataaatcctaacggttaagtttaaccccaaatgatgtatatgatggaccaaccttaaaagtggtcca 125179  T
Q  103 tcatagatcctatt-catatttttgatttaaaccgtttgatc 143  Q
     |||||| | ||||  || ||||| ||||||||| |||||||    
T  125178 ccatagaccttattaaatttttttaatttaaaccctttgatc 125137  T

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Target: scaffold0011 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 127501 - 127648
Alignment:
Q  1 atgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggt 99  Q
    ||||||||||||||||| ||| |||||||    ||||||||||  |||| |||||||||||||  ||  |||||||||||| | ||||||||||||||||    
T  127501 atgttttggtccctcatgtttgcctccgtcggtcaaataaatccctgacagttaactttaacctcaa--atgtctatggtgaaacaaccttaagagtggt 127598  T
Q  100 ccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 149  Q
    ||| ||||||||||||| || ||||| |||||||||||| ||| ||||||    
T  127599 ccaccatagatcctattaatgtttttaatttaaaccgttagatttttttt 127648  T

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Target: scaffold0013 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 32671 - 32787
Alignment:
Q  33 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctat--tcatatttttgattt 130  Q
    ||||||||||| | || |||||||||||||  ||  ||||||||||||||||||||||| |||||||||||||||||||||||  |  | ||||| ||||    
T  32671 ccaaataaatcctaactgttaactttaaccttaa--atgtctatggtggaccaaccttaggagtggtccatcatagatcctattattttttttttaattt 32768  T
Q  131 aaaccgtttgatctttttt 149  Q
    |||||||||||||||||||    
T  32769 aaaccgtttgatctttttt 32787  T

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Target: scaffold0219 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 8171 - 8083
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 158  Q
    |||||||||||||| |||||||||||| ||||||||||||||  |||| ||  |||| ||||||||||||||||  ||||| ||||||||    
T  8171 atgtctatggtggatcaaccttaagag-ggtccatcatagattatattaattattttaatttaaaccgtttgattgttttttttaaaaga 8083  T

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Target: scaffold2071 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 652 - 572
Alignment:
Q  79 tggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 159  Q
    |||||||||||||||||||||||| |||||| | |||| |  ||||| |||||||||||||||||| |||| | |||||||    
T  652 tggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatctgttttttaaaaagat 572  T

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Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 108583 - 108722
Alignment:
Q  3 gttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtcc 101  Q
    |||||| |||||||| ||||||||| | | ||||||||||| |  | ||||| |||||||| |||| || | ||||||||||||||||||| ||||||||    
T  108583 gttttgatccctcattttttcctccatttgccaaataaatccttgcagttaagtttaaccccaaataatat-tatggtggaccaaccttaaaagtggtcc 108681  T
Q  102 atcatagatcctattcatatttttgatttaaaccgtttgat 142  Q
    | ||||||| ||||| ||  || | ||||||||| ||||||    
T  108682 accatagatgctattaattattataatttaaaccttttgat 108722  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 83175 - 83063
Alignment:
Q  96 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 195  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  83175 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 83076  T
Q  196 tgagtcaacaaca 208  Q
    |||  ||||||||    
T  83075 tgaaccaacaaca 83063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 21262 - 21339
Alignment:
Q  69 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 146  Q
    |||||||||||||||||||||| ||||||||||| ||||||    ||| || ||||  |||| |||||||||||||||    
T  21262 atgtctatggtggaccaaccttcagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatcttt 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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