View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21283_high_4 (Length: 389)
Name: NF21283_high_4
Description: NF21283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21283_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 18 - 374
Target Start/End: Original strand, 24214968 - 24215324
Alignment:
| Q |
18 |
tagtttatttatgggacaagaatctaccttttacaacggttacagggaaagctgatgtaaaattatgatgtttgacatctgttttgttgaaaaaccgaag |
117 |
Q |
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| T |
24214968 |
tagtttatttatgggacaagaatctaccttttacaacggttacagggaaagctgatgtaaaattatgatgtttgacatccgttttgttgaaaaaccggtg |
24215067 |
T |
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| Q |
118 |
taacagtttggacctacagtaaaactgatgttagtggataaatctgtaattttgggtttttatagtggacaattttccctttacgacacctctgatgcat |
217 |
Q |
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| T |
24215068 |
taacaggttggacctacagtaaaactgatgttagtggatatatctgtaattttgggtttttatagtggaaaattttccctttacgacacctctgatgcat |
24215167 |
T |
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| Q |
218 |
taatactcgatataaaatgtctaaattagccagtggaaaatctccttcatgcactagtacaaacatttaatgatgcaagagtaattcaacttgatcgctg |
317 |
Q |
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| T |
24215168 |
taatactcgatataaaatgtctaaattagccagtggaaaatctcctccatgcagtagtacaaacatttaatgatgcaagagtaattcaacttgatcgctg |
24215267 |
T |
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| Q |
318 |
tgtagaattgcagaagtccaagtctccgcttgttgatacaattaatgttgttatttt |
374 |
Q |
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||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||| |
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| T |
24215268 |
tgtagaattaaataagtccaaatctccgcctgttgatacaattaatgttgttatttt |
24215324 |
T |
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