View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21284_high_32 (Length: 353)

Name: NF21284_high_32
Description: NF21284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21284_high_32
NF21284_high_32
[»] chr6 (15 HSPs)
chr6 (5-290)||(26857301-26857586)
chr6 (298-341)||(5311274-5311317)
chr6 (298-341)||(33807684-33807727)
chr6 (299-341)||(33802095-33802137)
chr6 (301-344)||(27438788-27438831)
chr6 (298-341)||(31738358-31738401)
chr6 (298-341)||(34084210-34084253)
chr6 (298-344)||(18773649-18773695)
chr6 (299-344)||(27440250-27440295)
chr6 (301-341)||(22299981-22300021)
chr6 (298-341)||(8412394-8412437)
chr6 (298-333)||(15435687-15435722)
chr6 (299-341)||(18139565-18139607)
chr6 (298-344)||(22298599-22298645)
chr6 (300-341)||(8411083-8411124)
[»] chr3 (33 HSPs)
chr3 (298-344)||(10987728-10987774)
chr3 (153-266)||(13224041-13224163)
chr3 (298-344)||(8371215-8371261)
chr3 (298-341)||(17350180-17350223)
chr3 (298-341)||(41387511-41387554)
chr3 (298-344)||(54654041-54654087)
chr3 (301-341)||(39133015-39133055)
chr3 (298-341)||(17345306-17345349)
chr3 (298-341)||(41386125-41386168)
chr3 (298-341)||(42632701-42632744)
chr3 (298-341)||(42633964-42634007)
chr3 (305-344)||(43101896-43101935)
chr3 (298-344)||(8372691-8372737)
chr3 (298-344)||(26798981-26799027)
chr3 (298-344)||(34901647-34901693)
chr3 (298-344)||(48254962-48255008)
chr3 (298-344)||(49122077-49122123)
chr3 (298-344)||(53809568-53809614)
chr3 (299-339)||(53808314-53808354)
chr3 (298-341)||(19622997-19623040)
chr3 (298-341)||(25583109-25583152)
chr3 (298-341)||(48336342-48336385)
chr3 (298-341)||(48338195-48338238)
chr3 (298-341)||(51400210-51400253)
chr3 (298-341)||(51825699-51825742)
chr3 (298-333)||(54752611-54752646)
chr3 (298-344)||(33563944-33563990)
chr3 (298-344)||(47855413-47855459)
chr3 (298-344)||(49334412-49334458)
chr3 (298-334)||(5810211-5810247)
chr3 (301-341)||(19622003-19622043)
chr3 (300-344)||(35633224-35633268)
chr3 (300-344)||(47806815-47806859)
[»] chr5 (36 HSPs)
chr5 (189-266)||(20737615-20737692)
chr5 (298-344)||(41905170-41905216)
chr5 (298-341)||(18677971-18678014)
chr5 (298-341)||(19525366-19525409)
chr5 (298-341)||(19825869-19825912)
chr5 (298-340)||(5382937-5382979)
chr5 (298-344)||(10084622-10084668)
chr5 (298-344)||(12936177-12936223)
chr5 (300-344)||(1273086-1273130)
chr5 (298-341)||(328232-328275)
chr5 (298-341)||(6629726-6629769)
chr5 (298-341)||(19523978-19524021)
chr5 (298-344)||(1273415-1273461)
chr5 (298-344)||(12950335-12950381)
chr5 (298-344)||(21389216-21389262)
chr5 (298-344)||(24805286-24805332)
chr5 (299-344)||(40059403-40059448)
chr5 (300-344)||(12933748-12933792)
chr5 (300-344)||(15613502-15613546)
chr5 (298-341)||(1663182-1663225)
chr5 (298-341)||(19827218-19827261)
chr5 (301-344)||(22812462-22812505)
chr5 (301-344)||(26912413-26912456)
chr5 (298-341)||(30916196-30916239)
chr5 (298-344)||(5061023-5061069)
chr5 (298-344)||(6914887-6914933)
chr5 (298-344)||(7345465-7345511)
chr5 (298-344)||(12937957-12938003)
chr5 (298-344)||(12952108-12952154)
chr5 (298-344)||(20991724-20991770)
chr5 (298-344)||(21306586-21306632)
chr5 (298-344)||(21314424-21314470)
chr5 (302-344)||(40058017-40058059)
chr5 (298-344)||(42979443-42979489)
chr5 (301-334)||(10085930-10085963)
chr5 (300-344)||(12947909-12947953)
[»] chr4 (34 HSPs)
chr4 (189-266)||(490057-490134)
chr4 (298-341)||(37560377-37560420)
chr4 (298-341)||(39590936-39590979)
chr4 (200-266)||(15525678-15525744)
chr4 (298-344)||(31711087-31711133)
chr4 (298-342)||(31712566-31712610)
chr4 (298-341)||(29686251-29686294)
chr4 (298-341)||(29688052-29688095)
chr4 (298-341)||(33376213-33376256)
chr4 (298-341)||(33377442-33377485)
chr4 (298-341)||(37558993-37559036)
chr4 (298-341)||(54374030-54374073)
chr4 (298-344)||(11113737-11113783)
chr4 (298-344)||(11115055-11115101)
chr4 (298-344)||(15786947-15786993)
chr4 (298-344)||(28103561-28103607)
chr4 (298-344)||(29663638-29663684)
chr4 (298-344)||(46796101-46796147)
chr4 (298-344)||(56000282-56000328)
chr4 (299-344)||(30682716-30682761)
chr4 (300-341)||(55953930-55953971)
chr4 (301-344)||(1273507-1273550)
chr4 (298-341)||(6616289-6616332)
chr4 (298-341)||(10403494-10403537)
chr4 (298-341)||(35789668-35789711)
chr4 (298-341)||(43894100-43894143)
chr4 (298-341)||(54372741-54372784)
chr4 (298-344)||(15445431-15445477)
chr4 (298-344)||(15446745-15446791)
chr4 (299-341)||(27408759-27408801)
chr4 (302-344)||(40146698-40146740)
chr4 (298-344)||(44664401-44664447)
chr4 (298-344)||(52981225-52981271)
chr4 (298-334)||(3217694-3217730)
[»] scaffold0013 (1 HSPs)
scaffold0013 (298-341)||(96893-96936)
[»] chr7 (33 HSPs)
chr7 (298-341)||(46675012-46675055)
chr7 (302-341)||(4857200-4857239)
chr7 (298-341)||(43006380-43006423)
chr7 (298-344)||(19278348-19278394)
chr7 (298-344)||(33458305-33458351)
chr7 (298-344)||(44114730-44114776)
chr7 (300-341)||(35128240-35128281)
chr7 (300-344)||(18802464-18802508)
chr7 (301-341)||(25155014-25155054)
chr7 (298-341)||(13446736-13446779)
chr7 (298-341)||(22744741-22744784)
chr7 (300-339)||(32141764-32141803)
chr7 (298-341)||(40926597-40926640)
chr7 (299-341)||(4858422-4858464)
chr7 (298-344)||(14107827-14107873)
chr7 (298-344)||(14417784-14417830)
chr7 (298-344)||(33459618-33459664)
chr7 (300-341)||(19279690-19279731)
chr7 (298-339)||(28326469-28326510)
chr7 (298-338)||(25532141-25532181)
chr7 (298-341)||(25153653-25153696)
chr7 (298-333)||(36703037-36703072)
chr7 (298-341)||(40930413-40930456)
chr7 (298-341)||(46457065-46457108)
chr7 (298-344)||(7345909-7345955)
chr7 (298-344)||(8439761-8439807)
chr7 (298-344)||(18670578-18670624)
chr7 (298-344)||(28325068-28325113)
chr7 (298-344)||(38406013-38406059)
chr7 (298-344)||(41127246-41127292)
chr7 (299-344)||(41618574-41618619)
chr7 (300-341)||(43930316-43930357)
chr7 (308-344)||(22039137-22039173)
[»] chr1 (31 HSPs)
chr1 (298-341)||(33793774-33793817)
chr1 (298-341)||(25785963-25786006)
chr1 (298-341)||(25787242-25787285)
chr1 (298-341)||(47136765-47136808)
chr1 (300-341)||(13929292-13929333)
chr1 (298-341)||(14071281-14071324)
chr1 (298-341)||(21276989-21277032)
chr1 (298-341)||(44977216-44977259)
chr1 (298-341)||(44979430-44979473)
chr1 (301-340)||(49139799-49139838)
chr1 (298-344)||(3978039-3978085)
chr1 (303-341)||(13930753-13930791)
chr1 (298-340)||(47411527-47411569)
chr1 (298-339)||(16217435-16217476)
chr1 (301-341)||(13641255-13641295)
chr1 (301-344)||(2973083-2973126)
chr1 (301-344)||(9633773-9633816)
chr1 (298-341)||(34653430-34653473)
chr1 (298-341)||(38451547-38451590)
chr1 (298-341)||(52439363-52439406)
chr1 (298-344)||(3979388-3979434)
chr1 (298-344)||(13642632-13642678)
chr1 (298-344)||(14312770-14312816)
chr1 (298-344)||(20953283-20953329)
chr1 (298-344)||(27690704-27690750)
chr1 (298-344)||(29001197-29001243)
chr1 (298-344)||(30548491-30548537)
chr1 (298-344)||(50678361-50678407)
chr1 (300-344)||(26056222-26056266)
chr1 (305-341)||(48467263-48467299)
chr1 (300-344)||(52741485-52741529)
[»] chr8 (41 HSPs)
chr8 (300-344)||(117045-117089)
chr8 (298-341)||(31623901-31623944)
chr8 (298-341)||(36070173-36070216)
chr8 (298-344)||(3237715-3237761)
chr8 (298-344)||(35943902-35943948)
chr8 (299-341)||(36940111-36940153)
chr8 (298-341)||(10053822-10053865)
chr8 (298-341)||(11081110-11081153)
chr8 (298-341)||(31625462-31625504)
chr8 (298-341)||(37323343-37323386)
chr8 (298-341)||(37474114-37474157)
chr8 (298-341)||(38591085-38591128)
chr8 (298-341)||(43386780-43386823)
chr8 (298-344)||(24068325-24068371)
chr8 (298-344)||(35945512-35945558)
chr8 (298-344)||(38790328-38790374)
chr8 (189-266)||(15002643-15002720)
chr8 (298-339)||(36756059-36756100)
chr8 (298-334)||(38589816-38589852)
chr8 (298-341)||(16363890-16363933)
chr8 (298-341)||(29739721-29739764)
chr8 (298-341)||(39544925-39544968)
chr8 (298-341)||(41866889-41866932)
chr8 (298-341)||(41867994-41868037)
chr8 (298-341)||(43275745-43275788)
chr8 (298-333)||(43278007-43278042)
chr8 (298-344)||(37980-38026)
chr8 (298-344)||(3271893-3271939)
chr8 (298-344)||(8395019-8395065)
chr8 (298-344)||(21961818-21961864)
chr8 (298-344)||(30864530-30864576)
chr8 (298-332)||(34616124-34616158)
chr8 (299-341)||(37276321-37276363)
chr8 (301-339)||(37324768-37324806)
chr8 (298-344)||(39515194-39515240)
chr8 (298-344)||(45385869-45385915)
chr8 (299-344)||(24706287-24706332)
chr8 (298-339)||(37472398-37472439)
chr8 (308-341)||(45541550-45541583)
chr8 (299-339)||(4810203-4810243)
chr8 (312-344)||(24069521-24069553)
[»] scaffold2127 (1 HSPs)
scaffold2127 (298-341)||(593-636)
[»] chr2 (25 HSPs)
chr2 (298-341)||(37867751-37867794)
chr2 (298-344)||(7038407-7038453)
chr2 (298-344)||(23177668-23177714)
chr2 (298-344)||(23588925-23588971)
chr2 (298-344)||(42029033-42029079)
chr2 (300-341)||(35799509-35799550)
chr2 (298-341)||(4829460-4829503)
chr2 (298-344)||(11575530-11575576)
chr2 (298-344)||(21010569-21010615)
chr2 (298-344)||(42027188-42027234)
chr2 (299-344)||(2305536-2305581)
chr2 (300-344)||(41796027-41796071)
chr2 (298-341)||(7036961-7037004)
chr2 (298-344)||(6706921-6706967)
chr2 (298-344)||(11392031-11392077)
chr2 (298-344)||(11408692-11408738)
chr2 (298-344)||(21545144-21545190)
chr2 (299-341)||(23178960-23179002)
chr2 (299-341)||(23590217-23590259)
chr2 (298-344)||(42246586-42246632)
chr2 (298-332)||(42596555-42596589)
chr2 (298-339)||(29424692-29424733)
chr2 (301-341)||(10368463-10368503)
chr2 (301-333)||(15650439-15650471)
chr2 (301-341)||(22653105-22653145)
[»] scaffold0002 (1 HSPs)
scaffold0002 (189-254)||(187487-187552)
[»] scaffold0290 (2 HSPs)
scaffold0290 (298-341)||(8374-8417)
scaffold0290 (298-333)||(9564-9599)
[»] scaffold0046 (2 HSPs)
scaffold0046 (298-341)||(23401-23444)
scaffold0046 (298-341)||(24893-24936)
[»] scaffold0034 (1 HSPs)
scaffold0034 (298-341)||(98044-98087)
[»] scaffold0024 (1 HSPs)
scaffold0024 (298-341)||(73064-73107)
[»] scaffold0003 (2 HSPs)
scaffold0003 (301-344)||(48531-48574)
scaffold0003 (299-344)||(47066-47111)
[»] scaffold0178 (2 HSPs)
scaffold0178 (298-344)||(2340-2386)
scaffold0178 (298-338)||(1207-1247)
[»] scaffold0084 (1 HSPs)
scaffold0084 (303-341)||(13282-13320)
[»] scaffold0051 (1 HSPs)
scaffold0051 (300-341)||(22125-22166)
[»] scaffold1974 (1 HSPs)
scaffold1974 (298-333)||(714-749)
[»] scaffold1878 (1 HSPs)
scaffold1878 (298-333)||(525-560)
[»] scaffold0839 (1 HSPs)
scaffold0839 (298-344)||(20-66)
[»] scaffold0015 (1 HSPs)
scaffold0015 (298-344)||(207873-207919)


Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 290
Target Start/End: Original strand, 26857301 - 26857586
Alignment:
Q  5 cactccaatgacccaagccagccccatcaggccaatccctttcactgaagttatgtcaaaatcaatcgttatttatttgatgttccgacctagatatnnn 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||       
T  26857301 cactccaatgacccaagccagcaccatcaggccaatccctttcactgaagttatgtcaaaatcaatcgttatttatttgatgttctgacatagatattag 26857400  T
Q  105 nnnnnnnnnnnnnnnaaatgaccacagagatatctctcctaaagcttctaagccggtggacggtgaggattacgtcaagtcatcatgccctgggagacac 204  Q
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26857401 taatagtagtagtagaaatgaccacagagatatctctcctaaagcttctaagccggtggacggtgaggattatgtcaagtcatcatgccctgggagacac 26857500  T
Q  205 acgtgctacaatggtcgggacaaaggatcacgatcctgcgtgggtgagctgatttcaaaaacaatagcggagggacagatctgtta 290  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  26857501 acgtgctacaatggtcgggacaaaggatcacgatcccacgtgggtgagctgacttcaaaaacaatagcagagggacagatctgtta 26857586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 5311274 - 5311317
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  5311274 ggcttaatacatcatttggtcccttaacttatttttggttttca 5311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 33807684 - 33807727
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  33807684 ggcttaatacattatttgatcccttaacttatttttggttttca 33807727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 33802137 - 33802095
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttca 33802095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 27438788 - 27438831
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  27438788 ttaatacatcatttggtcccttaacttatttttggatttcattt 27438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 31738358 - 31738401
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  31738358 ggcttaatacatcctttggtcccttaacttatttttggttttca 31738401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 34084253 - 34084210
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  34084253 ggcttaatacatcatttggtcccttaacttatttctggttttca 34084210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 18773649 - 18773695
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||    
T  18773649 ggcttaatacatgctttgatcccttaacttatttttggatttcattt 18773695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 27440295 - 27440250
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattt 27440250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 22300021 - 22299981
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  22300021 ttaatacatgctttgatcccttaacttatttttggttttca 22299981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 8412437 - 8412394
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||    
T  8412437 ggcttaatacattatttggtcccttaacttattttttgttttca 8412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Original strand, 15435687 - 15435722
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||||||||||| |||||||||||||||||    
T  15435687 ggcttaatacatcatttggtcccttaacttattttt 15435722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 18139607 - 18139565
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| ||||||||||||||||  |||||||    
T  18139607 gcttaatacatcatttggtcccttaacttattttccgttttca 18139565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 22298599 - 22298645
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  22298599 ggcttaatacatgctttggtcctttaacttatttttggttttcattt 22298645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 8411083 - 8411124
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||  | |||||||||||||||||||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttca 8411124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 10987774 - 10987728
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10987774 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 10987728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 266
Target Start/End: Complemental strand, 13224163 - 13224041
Alignment:
Q  153 taagccggtggacggtgaggattacgtcaagtcatcatgccc---------tgggagacacacgtgctacaatggtcgggacaaaggatcacgatcctgc 243  Q
    |||||||| ||| ||||||||| |||||||||||||||||||         |||| ||||||||||||||||||| |||||||||||||| ||| || ||    
T  13224163 taagccggaggaaggtgaggatgacgtcaagtcatcatgccccttatgccctgggcgacacacgtgctacaatggacgggacaaaggatcgcgaccccgc 13224064  T
Q  244 gtgggtgagctgatttcaaaaac 266  Q
    | ||||||||| | |||||||||    
T  13224063 gagggtgagctaacttcaaaaac 13224041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 8371215 - 8371261
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  8371215 ggcttaatacatcatttgatcccttaacttattttttgttttcattt 8371261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 17350223 - 17350180
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  17350223 ggcttaatacatcatttggtcccttaacttatttttggttttca 17350180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 41387554 - 41387511
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  41387554 ggcttaatacatcatttggtcccttaacttatttttggttttca 41387511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 54654087 - 54654041
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  54654087 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 54654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 39133015 - 39133055
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  39133015 ttaatacatcatttgatctcttaacttatttttggttttca 39133055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 17345306 - 17345349
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  17345306 ggcttaatacattatttggtcccttaacttatttttggttttca 17345349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 41386125 - 41386168
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  41386125 ggcttaatacatcgtttggtcccttaacttatttttggttttca 41386168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 42632701 - 42632744
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  42632701 ggcttaatacatcatttggtcccttaacttacttttggttttca 42632744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 42634007 - 42633964
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  42634007 ggcttaatacatcatttggtcccttaacttatttttgattttca 42633964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 344
Target Start/End: Original strand, 43101896 - 43101935
Alignment:
Q  305 tacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43101896 tacatcatttggtcccttaacttatttttggttttcattt 43101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 8372737 - 8372691
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  8372737 ggcttaatatatcgtttggtcccttaacttatttttggttttcattt 8372691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 26799027 - 26798981
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||    
T  26799027 ggcttaatacatcatttggtctcttaacttatttttggtttttattt 26798981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 34901647 - 34901693
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||    
T  34901647 ggcttaatacatgctttgatcccttaacttatttttggatttcattt 34901693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 48255008 - 48254962
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  48255008 ggcttaatacatgatttgatcccttaacttattttttgtttttattt 48254962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 49122123 - 49122077
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  49122123 ggcttaatatatcatttggtcctttaacttatttttggttttcattt 49122077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 53809614 - 53809568
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||    
T  53809614 ggcttaatacatcatttagtcccttaacttattttttgttttcattt 53809568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 53808314 - 53808354
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  53808314 gcttaatacatcatttggtcccttaacttattttcggtttt 53808354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 19623040 - 19622997
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||    
T  19623040 ggcttaatacatcacttgctcccttaacttattttttgttttca 19622997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 25583109 - 25583152
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  |||||||||||||||||| ||||||    
T  25583109 ggcttaatacatcatttagtcccttaacttatttttgattttca 25583152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 48336342 - 48336385
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  48336342 ggcttaatacatcatttgctcccttaacttattttcagttttca 48336385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 48338238 - 48338195
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  48338238 ggcttaatacatcatttggtcccttaacttattttcagttttca 48338195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 51400210 - 51400253
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||  |||| |||||||||||||||||||||||||    
T  51400210 ggcttaatacatgttttggtcccttaacttatttttggttttca 51400253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 51825742 - 51825699
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||    
T  51825742 ggcttaatatatcatttggtcccttaacttatttttggatttca 51825699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Original strand, 54752611 - 54752646
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||||||||||| |||||||||||||||||    
T  54752611 ggcttaatacatcatttggtcccttaacttattttt 54752646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 33563944 - 33563990
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  33563944 ggcttaatacatgttttggtcccttaacttatttttggatttcattt 33563990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 47855459 - 47855413
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  47855459 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 47855413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 49334458 - 49334412
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||||||| |||| || |||||||||| ||||||||||    
T  49334458 ggcttaatacatcatttaatcctttgacttattttttgttttcattt 49334412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 5810247 - 5810211
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttg 334  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  5810247 ggcttaatacatgatttggtcccttaacttatttttg 5810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 19622003 - 19622043
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| ||| |||| ||||||||||||||||    
T  19622003 ttaatacatcatttggtcctttaagttatttttggttttca 19622043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 35633224 - 35633268
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||  |||| ||||||||||||||||||| ||||||||    
T  35633224 cttaatacatgctttggtcccttaacttatttttggatttcattt 35633268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 47806815 - 47806859
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||    
T  47806815 cttaatacatcatttagtaccttaacttatttttggatttcattt 47806859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 20737615 - 20737692
Alignment:
Q  189 atgccctgggagacacacgtgctacaatggtcgggacaaaggatcacgatcctgcgtgggtgagctgatttcaaaaac 266  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||| || ||| ||||||||| | |||||||||    
T  20737615 atgccctgggtgacacacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaaaaac 20737692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 41905170 - 41905216
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  41905170 ggcttaatacatcatttggtcccttaacttatttttggttttcattt 41905216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 18677971 - 18678014
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttca 18678014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 19525409 - 19525366
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  19525409 ggcttaatacatcatttggtcccttaacttatttttggttttca 19525366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 19825869 - 19825912
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  19825869 ggcttaatacatcatttggtcccttaacttatttttggttttca 19825912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 5382937 - 5382979
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttc 340  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  5382937 ggcttaatacatcatttggtcccttaacttatttttggttttc 5382979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 10084622 - 10084668
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  10084622 ggcttaatacatcatttgttcccttaatttatttttggttttcattt 10084668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 12936223 - 12936177
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  12936223 ggcttaatacatcatttagtcccttaacttatttttggttttcattt 12936177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 1273086 - 1273130
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  1273086 cttaatacatcatttggtcccttaatttatttttggttttcattt 1273130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 328275 - 328232
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  328275 ggcttaatacatcatttgatcacttaacttattttttgttttca 328232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 6629726 - 6629769
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  6629726 ggcttaatacatcatttggtcccttaacttatttgtggttttca 6629769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 19523978 - 19524021
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  19523978 ggcttaatatatcatttggtcccttaacttatttttggttttca 19524021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 1273461 - 1273415
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  1273461 ggcttaatatatcgtttggtcccttaacttatttttggttttcattt 1273415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 12950381 - 12950335
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||    
T  12950381 ggcttaatacatcatttagtcccttaacttatttatggttttcattt 12950335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 21389262 - 21389216
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  21389262 ggcttaatacatgctttggtcccttaacttatttttggttttcattt 21389216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 24805286 - 24805332
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||    
T  24805286 ggcttaatacatcatttggtctcttaacttatttttggtttttattt 24805332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 40059448 - 40059403
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||    
T  40059448 gcttaatatataatttggtcccttaacttatttttggttttcattt 40059403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 12933748 - 12933792
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattt 12933792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 15613502 - 15613546
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||    
T  15613502 cttaatacatgctttgatcccttaacttatttttggatttcattt 15613546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 1663182 - 1663225
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  ||||||||||||||||||| |||||    
T  1663182 ggcttaatacatcatttagtcccttaacttatttttggatttca 1663225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 19827261 - 19827218
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  || ||||||||||||||||||||||    
T  19827261 ggcttaatacatcatttagtctcttaacttatttttggttttca 19827218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 22812505 - 22812462
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||||| |||||||||||||||||  |||||||||    
T  22812505 ttaatacatcatttggtcccttaacttattttttattttcattt 22812462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 26912456 - 26912413
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||  |||||||||||||||||||||| ||||||||||    
T  26912456 ttaatacatgctttgatcccttaacttattttttgttttcattt 26912413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 30916239 - 30916196
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  30916239 ggcttaatacatcatttggtcccttaacttattttatgttttca 30916196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 5061023 - 5061069
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  5061023 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 5061069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 6914933 - 6914887
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  6914933 ggcttaatacatgatttggtcccttaacttatttttgaatttcattt 6914887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 7345511 - 7345465
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattt 7345465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 12938003 - 12937957
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  12938003 ggcttaatacatgctttgatcccttaacttatttttgaatttcattt 12937957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 12952154 - 12952108
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  12952154 ggcttaatacatgctttgatcccttaacttatttttgaatttcattt 12952108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 20991770 - 20991724
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  ||||||||||||||||||||| || ||||||||    
T  20991770 ggcttaatacatgttttgatcccttaacttattttcggatttcattt 20991724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 21306586 - 21306632
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  21306586 ggcttaatacatgctttgatcccttaacttatttttgaatttcattt 21306632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 21314424 - 21314470
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  21314424 ggcttaatacatgctttgatcccttaacttatttttgaatttcattt 21314470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 40058017 - 40058059
Alignment:
Q  302 taatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||    
T  40058017 taatatatcgtttgatctcttaacttatttttggttttcattt 40058059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 42979443 - 42979489
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| |||||||||||||  |||||||||| ||||||||    
T  42979443 ggcttaatacataatttgatcccttagtttatttttggatttcattt 42979489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 10085963 - 10085930
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttg 334  Q
    ||||||||||||||| ||||||||||||||||||    
T  10085963 ttaatacatcatttggtcccttaacttatttttg 10085930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 12947909 - 12947953
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||| |||||||  |||||||||||||||||| |||||||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattt 12947953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 490057 - 490134
Alignment:
Q  189 atgccctgggagacacacgtgctacaatggtcgggacaaaggatcacgatcctgcgtgggtgagctgatttcaaaaac 266  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||| || ||| ||||||||| | |||||||||    
T  490057 atgccctgggcgacacacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaaaaac 490134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 37560420 - 37560377
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  37560420 ggcttaatacatcatttggtcccttaacttatttttggttttca 37560377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 39590936 - 39590979
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  39590936 ggcttaatacatcatttggtcccttaacttatttttggttttca 39590979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 15525744 - 15525678
Alignment:
Q  200 gacacacgtgctacaatggtcgggacaaaggatcacgatcctgcgtgggtgagctgatttcaaaaac 266  Q
    ||||||||||||||||||| |||||||||||||| ||| || ||| ||||||||| | |||||||||    
T  15525744 gacacacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaaaaac 15525678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 31711087 - 31711133
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  31711087 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 31711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 31712610 - 31712566
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcat 342  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  31712610 ggcttaatacatcatttgatcctttaacttatttttggatttcat 31712566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 29686251 - 29686294
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  29686251 ggcttaatacatcatttagtcccttaacttatttttggttttca 29686294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 29688095 - 29688052
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  29688095 ggcttaatacattatttggtcccttaacttatttttggttttca 29688052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 33376213 - 33376256
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  33376213 ggcttaatacatcatttggtctcttaacttatttttggttttca 33376256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 33377485 - 33377442
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  33377485 ggcttaatacatcatttggtcccttaacttatttttgattttca 33377442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 37558993 - 37559036
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  37558993 ggcttaatacatcatttggttccttaacttatttttggttttca 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 54374073 - 54374030
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  54374073 ggcttaatacatcatttgatcccttaacttattttcagttttca 54374030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 11113737 - 11113783
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||    
T  11113737 ggcttaatacatcatttggtcacttaacttattttcggttttcattt 11113783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 11115101 - 11115055
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||    
T  11115101 ggcttaatacatcatttggtcccttaacttattttcagttttcattt 11115055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 15786947 - 15786993
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  15786947 ggcttaatacatcatttggtccattaacttattttttgttttcattt 15786993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 28103607 - 28103561
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  28103607 ggcttaacacatcatttggtcccttaacttatttttggatttcattt 28103561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 29663638 - 29663684
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  29663638 ggcttaatacatcctttaatcccttaatttatttttggttttcattt 29663684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 46796147 - 46796101
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  46796147 ggcttaatacatcgtttggtcccttaacttatttttggttttaattt 46796101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 56000282 - 56000328
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||    
T  56000282 ggcttaatacatgctttgatcccttaacttatttttgattttcattt 56000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 30682716 - 30682761
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  30682716 gcttaatacataatttggtcccttaacttatttttagttttcattt 30682761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 55953971 - 55953930
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||| ||||||||||||||||||||||||||| ||||||    
T  55953971 cttaatatatcatttgatcccttaacttatttttgattttca 55953930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 1273550 - 1273507
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||    
T  1273550 ttaatatatcatttggtcccttaacttatttttggttttaattt 1273507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 6616332 - 6616289
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  6616332 ggcttaatacatcatttggtcccttaacttattttccgttttca 6616289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 10403537 - 10403494
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  || ||||||||||||||||||||||    
T  10403537 ggcttaatacatcatttagtctcttaacttatttttggttttca 10403494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 35789711 - 35789668
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  || ||||||||||||||||||||||    
T  35789711 ggcttaatacatcatttagtctcttaacttatttttggttttca 35789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 43894100 - 43894143
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| |  |||||||||||||||||||||||||    
T  43894100 ggcttaatacatcatatagtcccttaacttatttttggttttca 43894143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 54372741 - 54372784
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  54372741 ggcttaatacatcatttggtcccttaacttattttccgttttca 54372784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 15445431 - 15445477
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  15445431 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 15445477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 15446791 - 15446745
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  15446791 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 15446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 27408759 - 27408801
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| ||||||||||||||||  |||||||    
T  27408759 gcttaatacatcatttggtcccttaacttattttcagttttca 27408801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 40146740 - 40146698
Alignment:
Q  302 taatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||    
T  40146740 taatacatcatttggtcccttaacgtatttttggtttttattt 40146698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 44664447 - 44664401
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| |||| ||||||||||||||||||| ||| ||||    
T  44664447 ggcttaatacatcctttggtcccttaacttatttttggattttattt 44664401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 52981271 - 52981225
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||| ||||| ||||||| ||||||||||||||| ||||||||||    
T  52981271 ggcttactacattatttgattccttaacttatttttagttttcattt 52981225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 3217730 - 3217694
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttg 334  Q
    ||||||||||||  |||||||||||||||||||||||    
T  3217730 ggcttaatacattctttgatcccttaacttatttttg 3217694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 96936 - 96893
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  96936 ggcttaatacatcatttgatcccttaacttatttttggttttca 96893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 46675055 - 46675012
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46675055 ggcttaatacatcatttgatcccttaacttatttttggttttca 46675012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 4857200 - 4857239
Alignment:
Q  302 taatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4857200 taatacatcatttgatcccttaacttatttttggttttca 4857239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 43006380 - 43006423
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  43006380 ggcttaatacatcatttggtcccttaacttatttttggttttca 43006423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 19278348 - 19278394
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  19278348 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 19278394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 33458305 - 33458351
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  33458305 ggcttaatacatcatttggtcctttaacttatttttggttttcattt 33458351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 44114776 - 44114730
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  44114776 ggcttaatacatcatttggtcccttaacttatttttagttttcattt 44114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 35128281 - 35128240
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  35128281 cttaatacatcatttggtcccttaacttatttttggttttca 35128240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 18802508 - 18802464
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattt 18802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 25155054 - 25155014
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttca 25155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 13446779 - 13446736
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  13446779 ggcttaatacatcatttggtcacttaacttatttttggttttca 13446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 22744741 - 22744784
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  22744741 ggcttaatacatcatttggtcccttaacttatttttgattttca 22744784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 32141764 - 32141803
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  32141764 cttaatacatcatttgatcccttaatttatttttggtttt 32141803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 40926640 - 40926597
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  40926640 ggcttaatacatcatttagtcccttaacttatttttggttttca 40926597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 4858464 - 4858422
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttca 4858422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 14107827 - 14107873
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  14107827 ggcttaatacatcatttggtcatttaacttatttttggttttcattt 14107873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 14417784 - 14417830
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  14417784 ggcttaatacatcatttggtcatttaacttatttttggttttcattt 14417830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 33459664 - 33459618
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||    
T  33459664 ggcttaatacatcatttagtcccataacttatttttggttttcattt 33459618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 19279731 - 19279690
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  19279731 cttaatacatcgtttggtcccttaacttatttttggttttca 19279690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 28326510 - 28326469
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  28326510 ggcttaatacattatttgatcccttaatttatttttggtttt 28326469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 25532141 - 25532181
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttt 338  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  25532141 ggcttaatacatcatttgatcctttaacttattttttgttt 25532181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 25153653 - 25153696
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||| | ||||||    
T  25153653 ggcttaatacatcatttggtcccttaacttattttcgattttca 25153696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 36703072 - 36703037
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||||||||||| |||||||||||||||||    
T  36703072 ggcttaatacatcatttggtcccttaacttattttt 36703037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 40930413 - 40930456
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||    
T  40930413 ggcttaatacatcgtttgatcccttgatttatttttggttttca 40930456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 46457065 - 46457108
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||| |||| | |||||||||||||||||||||||    
T  46457065 ggcttaatacatcgtttggttccttaacttatttttggttttca 46457108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 7345909 - 7345955
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  7345909 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 7345955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 8439761 - 8439807
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  8439761 ggcttaatacatgctttgatcccttaacttatttttgaatttcattt 8439807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 18670624 - 18670578
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| |||| ||||||||||||||||||| ||| ||||    
T  18670624 ggcttaatacatcctttggtcccttaacttatttttggattttattt 18670578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 28325068 - 28325113
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  28325068 ggcttaatacatcatttggtcc-ttaacttatttttggttttaattt 28325113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 38406013 - 38406059
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  38406013 ggcttaatacattatttggtcctttaatttatttttggttttcattt 38406059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 41127292 - 41127246
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  ||||||||||||||||||||| || ||||||||    
T  41127292 ggcttaatacatgctttgatcccttaacttattttcggatttcattt 41127246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 41618619 - 41618574
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||  |||| ||||||||||||||||||| ||||||||    
T  41618619 gcttaatacatgctttggtcccttaacttatttttggatttcattt 41618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 43930316 - 43930357
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||| |||||||| |||||||||||||||||| ||||||    
T  43930316 cttaatatatcatttggtcccttaacttatttttgattttca 43930357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 22039137 - 22039173
Alignment:
Q  308 atcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||||||||| | ||||||||||    
T  22039137 atcatttgatcccttaacttatttcttgttttcattt 22039173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 33793774 - 33793817
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33793774 ggcttaatacatcatttgatcccttaacttatttttggttttca 33793817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 25785963 - 25786006
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  25785963 ggcttaatacatcatttggtcccttaacttatttttggttttca 25786006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 25787285 - 25787242
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  25787285 ggcttaatacatcatttggtcccttaacttatttttggttttca 25787242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 47136808 - 47136765
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  47136808 ggcttaatacatcatttgatccattaacttatttttggttttca 47136765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 13929292 - 13929333
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttca 13929333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 14071324 - 14071281
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  14071324 ggcttaatacatcatttggtcccttaatttatttttggttttca 14071281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 21276989 - 21277032
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  21276989 ggcttaatacattatttggtcccttaacttatttttggttttca 21277032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 44977216 - 44977259
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  44977216 ggcttaatacattatttggtcccttaacttatttttggttttca 44977259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 44979430 - 44979473
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  44979430 ggcttaatacatcatttaatcccttaacttattttttgttttca 44979473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 49139799 - 49139838
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttc 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  49139799 ttaatacatcatttggtcccttaacttatttttggttttc 49139838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 3978039 - 3978085
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  3978039 ggcttaatacatcatttggtcccttaacttatttttgaatttcattt 3978085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 13930791 - 13930753
Alignment:
Q  303 aatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  13930791 aatacatcatttggtcccttaacttatttttggttttca 13930753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 47411569 - 47411527
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttc 340  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  47411569 ggcttaatacatcatttggtcccttaacttattttcggttttc 47411527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 16217435 - 16217476
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  16217435 ggcttaatacataatttgattccttaacttatttttggtttt 16217476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 13641255 - 13641295
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  13641255 ttaatacatgctttgatcccttaacttatttttggttttca 13641295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 2973126 - 2973083
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||| || ||||||||||||||||||||||| ||||||||||    
T  2973126 ttaatatattatttgatcccttaacttattttttgttttcattt 2973083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 9633773 - 9633816
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattt 9633816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 34653430 - 34653473
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||    
T  34653430 ggctcaatacatcatttggtcccttaacttattttcggttttca 34653473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 38451547 - 38451590
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  38451547 ggcttaatacatcatttggtcccttaacttattttatgttttca 38451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 52439406 - 52439363
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  52439406 ggcttaatacatcatttggtcccttaacttattttctgttttca 52439363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 3979434 - 3979388
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||| |||||| ||||| ||||||||||||||||||| ||||||||    
T  3979434 ggcttgatacattatttggtcccttaacttatttttggatttcattt 3979388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 13642678 - 13642632
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  13642678 ggcttaatacatgctttggtcctttaacttatttttggttttcattt 13642632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 14312770 - 14312816
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||||| ||| ||||    
T  14312770 ggcttaatacatgatttggtcccttaacttatttttggattttattt 14312816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 20953283 - 20953329
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  20953283 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 20953329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 27690750 - 27690704
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  27690750 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 27690704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 29001243 - 29001197
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  29001243 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 29001197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 30548491 - 30548537
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  30548491 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 30548537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 50678361 - 50678407
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  50678361 ggcttaatacatgatttggtcccttaacttatttttgaatttcattt 50678407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 26056266 - 26056222
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||  |||| ||||||||||||||||||| ||||||||    
T  26056266 cttaatacatactttggtcccttaacttatttttggatttcattt 26056222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 48467263 - 48467299
Alignment:
Q  305 tacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  48467263 tacatcatttggtcccttaacttattttttgttttca 48467299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 52741485 - 52741529
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||| |||||||| ||||||||||||||||| ||||| ||||    
T  52741485 cttaatatatcatttggtcccttaacttatttttcgtttttattt 52741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 117045 - 117089
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  117045 cttaatacatcgtttgatcccttaacttatttttggttttcattt 117089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 31623901 - 31623944
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  31623901 ggcttaatacatcatttggtcccttaacttatttttggttttca 31623944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 36070173 - 36070216
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  36070173 ggcttaatacatcatttgatcccttaatttatttttggttttca 36070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 3237761 - 3237715
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3237761 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 3237715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 35943902 - 35943948
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  35943902 ggcttaatacatcgtttggtcccttaacttatttttggttttcattt 35943948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 36940153 - 36940111
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttca 36940111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 10053865 - 10053822
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  10053865 ggcttaatacatcatttagtcccttaacttatttttggttttca 10053822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 11081153 - 11081110
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  11081153 ggcttaatacatcatttgatcccttaacttattttctgttttca 11081110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 31625504 - 31625462
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  31625504 ggcttaatacatcatttgatcc-ttaacttatttttggttttca 31625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 37323343 - 37323386
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  37323343 ggcttaatacatcatttggtcccttaatttatttttggttttca 37323386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 37474157 - 37474114
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  37474157 ggcttaatacatcatttcatcccttaacttatttatggttttca 37474114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 38591128 - 38591085
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  38591128 ggcttaatacatcatttggtcccttaacttatttttgattttca 38591085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 43386823 - 43386780
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  43386823 ggcttaatacatcatatggtcccttaacttatttttggttttca 43386780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 24068325 - 24068371
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  24068325 ggcttaatacatgctttggtcccttaacttatttttggttttcattt 24068371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 35945558 - 35945512
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  35945558 ggcttaatacattatttggtcccttaacttattttttgttttcattt 35945512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 38790374 - 38790328
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||    
T  38790374 ggcttaatacatcagttgatcccttaacttattttcgtttttcattt 38790328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 15002720 - 15002643
Alignment:
Q  189 atgccctgggagacacacgtgctacaatggtcgggacaaaggatcacgatcctgcgtgggtgagctgatttcaaaaac 266  Q
    |||||||||| ||||||||| ||||||||| || |||||||||||  ||||  ||| ||||||||| | |||||||||    
T  15002720 atgccctgggcgacacacgttctacaatggacgtgacaaaggatcgtgatctcgcgagggtgagctaacttcaaaaac 15002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 36756059 - 36756100
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  36756059 ggcttaatacatcatttggtcccttaacttatttttagtttt 36756100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 38589816 - 38589852
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttg 334  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38589816 ggcttaatacatcatttggtcccttaacttatttttg 38589852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 16363933 - 16363890
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||| || ||||| |||||||||||||||||||||||||    
T  16363933 ggcttaatatataatttggtcccttaacttatttttggttttca 16363890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 29739764 - 29739721
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| || ||||| ||||||||||||||||    
T  29739764 ggcttaatacatcatttggtctcttaatttatttttggttttca 29739721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 39544925 - 39544968
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  39544925 ggcttaatacatcatttggtcccttaacttattttctgttttca 39544968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 41866889 - 41866932
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||    
T  41866889 ggcttaatacaccatttggtcccttaacttatttttgattttca 41866932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 41868037 - 41867994
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||| |||||||| |||||||    
T  41868037 ggcttaatacatcatttggtcccttaatttatttttagttttca 41867994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 43275745 - 43275788
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| || |||||||||||||| |||||||    
T  43275745 ggcttaatacatcatttggtctcttaacttattttttgttttca 43275788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 43278042 - 43278007
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    ||||||||| ||||||||||||||||||||||||||    
T  43278042 ggcttaatatatcatttgatcccttaacttattttt 43278007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 37980 - 38026
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| |||| ||||||||||||||||| ||||| ||||    
T  37980 ggcttaatacatcgtttggtcccttaacttattttttgttttaattt 38026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 3271893 - 3271939
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  3271893 ggcttaatacatgatttggtcccttaacttatttttgaatttcattt 3271939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 8395019 - 8395065
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||| |||||||| || |||||||||||||||||||| ||||    
T  8395019 ggcttaatatatcatttggtctcttaacttatttttggtttttattt 8395065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 21961818 - 21961864
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| |||||||| |||||||||  ||||||||    
T  21961818 ggcttaatacatcatttggtcccttaatttatttttgactttcattt 21961864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 30864576 - 30864530
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  30864576 ggcttaatacatgatttggtcccttaacttatttttgaatttcattt 30864530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 34616124 - 34616158
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttt 332  Q
    ||||||||||||||| |||||||||||||||||||    
T  34616124 ggcttaatacatcatctgatcccttaacttatttt 34616158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 37276363 - 37276321
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttca 37276321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 37324806 - 37324768
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  37324806 ttaatacgtcatttaatcccttaacttatttttggtttt 37324768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 39515194 - 39515240
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||| |||  |||| ||||||||||||||||||||||||||||    
T  39515194 ggcttaatgcatgttttggtcccttaacttatttttggttttcattt 39515240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 45385915 - 45385869
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  45385915 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 45385869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 24706332 - 24706287
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||  |||| ||||||||||||||||||| ||||||||    
T  24706332 gcttaatacatgctttggtcccttaacttatttttggatttcattt 24706287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 37472398 - 37472439
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  37472398 ggcttaatacatcatttcgtcctttaacttatttttggtttt 37472439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 45541550 - 45541583
Alignment:
Q  308 atcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||||||||| |||||    
T  45541550 atcatttgatcccttaacttatttttggatttca 45541583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 4810243 - 4810203
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  4810243 gcttagtacatcatttcgtcccttaacttatttttggtttt 4810203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 24069553 - 24069521
Alignment:
Q  312 tttgatcccttaacttatttttggttttcattt 344  Q
    |||| ||||||||||||||||||||||||||||    
T  24069553 tttggtcccttaacttatttttggttttcattt 24069521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 636 - 593
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  636 ggcttaatacatcatttgatccattaacttatttttggttttca 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 37867751 - 37867794
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  37867751 ggcttaatacatcatttggtcccttaacttatttttggttttca 37867794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 7038453 - 7038407
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  7038453 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 7038407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 23177668 - 23177714
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  23177668 ggcttaatacatcatttggtcccttaatttatttttggttttcattt 23177714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 23588925 - 23588971
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  23588925 ggcttaatacatcatttggtcccttaatttatttttggttttcattt 23588971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 42029079 - 42029033
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  42029079 ggcttaatacatcatttggtcccttaacgtatttttggttttcattt 42029033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 35799509 - 35799550
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  35799509 cttaatacatcatttcatcccttaacttatttttggttttca 35799550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 4829460 - 4829503
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  4829460 ggcttaatacatcatttgattccttaacttatttttcgttttca 4829503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 11575576 - 11575530
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  11575576 ggcttaatacatcatttggtccattaacttatttttggttttaattt 11575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 21010615 - 21010569
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  21010615 ggcttaatatatcatttgatcccttaacttattttttgtttttattt 21010569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 42027188 - 42027234
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||    
T  42027188 ggcttaatacatcgtttggtcccttaacttatttttgattttcattt 42027234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 2305536 - 2305581
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||    
T  2305536 gcttaatacatgctttgatcccttaacttatttttggatttcattt 2305581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 41796071 - 41796027
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||  |||||||||||||||||| |||||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattt 41796027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 7036961 - 7037004
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||    
T  7036961 ggcttaatacatcatttggtcctttaacttatttttggatttca 7037004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 6706921 - 6706967
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  6706921 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 6706967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 11392077 - 11392031
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  11392077 ggcttaatacatactttgatcccttaacttatttttgaatttcattt 11392031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 11408738 - 11408692
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||||    
T  11408738 ggcttaatacatactttgatcccttaacttatttttgaatttcattt 11408692  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 21545190 - 21545144
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  21545190 ggcttaatacatgttttggtcccttaacttatttttggatttcattt 21545144  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 23179002 - 23178960
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||    
T  23179002 gcttaatccatcatttggtcccttaacttatttttagttttca 23178960  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 23590259 - 23590217
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||    
T  23590259 gcttaatccatcatttggtcccttaacttatttttagttttca 23590217  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 42246586 - 42246632
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||||||    
T  42246586 ggcttaatacatgctttggtcccttaacttgtttttggttttcattt 42246632  T

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Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 42596555 - 42596589
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttt 332  Q
    |||||||||||||||||| ||||||||||||||||    
T  42596555 ggcttaatacatcatttggtcccttaacttatttt 42596589  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 29424733 - 29424692
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggtttt 339  Q
    ||||||||||||  |||| |||||||||||||||||||||||    
T  29424733 ggcttaatacattgtttggtcccttaacttatttttggtttt 29424692  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 10368503 - 10368463
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| |||||||| ||||||||| ||||||    
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttca 10368463  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Original strand, 15650439 - 15650471
Alignment:
Q  301 ttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||| ||||||||||||||||||||||    
T  15650439 ttaatacatcgtttgatcccttaacttattttt 15650471  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 22653145 - 22653105
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  22653145 ttaatacatgctttgatcccttaacttatttttggatttca 22653105  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 187552 - 187487
Alignment:
Q  189 atgccctgggagacacacgtgctacaatggtcgggacaaaggatcacgatcctgcgtgggtgagct 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || |||||  ||| |||||||||    
T  187552 atgccctgggcgacacacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagct 187487  T

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Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 8374 - 8417
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  8374 ggcttaatccatcatttggtcccttaacttatttttggttttca 8417  T

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Target: scaffold0290; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 9599 - 9564
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||||||||||| |||||||||||||||||    
T  9599 ggcttaatacatcatttggtcccttaacttattttt 9564  T

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Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 23401 - 23444
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  23401 ggcttaatacatcatatggtcccttaacttatttttggttttca 23444  T

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Target: scaffold0046; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 24936 - 24893
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||    
T  24936 ggcttaatacatcgtttggtcccttaatttatttttggttttca 24893  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 98044 - 98087
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  98044 ggcttaatacatcatttgatcccttaacttattttcagttttca 98087  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 73107 - 73064
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  73107 ggcttaatacatcatttagtcccttaacttatttttggttttca 73064  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 48574 - 48531
Alignment:
Q  301 ttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  48574 ttaatacatcatttggtcccttaacttatttttggatttcattt 48531  T

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Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 47066 - 47111
Alignment:
Q  299 gcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattt 47111  T

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Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 2386 - 2340
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  2386 ggcttaatacatgctttggtcccttaacttatttttggttttcattt 2340  T

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Target: scaffold0178; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 1207 - 1247
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttt 338  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  1207 ggcttaatacatgttttgatcccttaacttatttttggttt 1247  T

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Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 13320 - 13282
Alignment:
Q  303 aatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13320 aatacatcatatgatcccttaacttatttttggttttca 13282  T

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Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 22125 - 22166
Alignment:
Q  300 cttaatacatcatttgatcccttaacttatttttggttttca 341  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  22125 cttaatacatcatttgatcccttaccttatttttgattttca 22166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 749 - 714
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||||||||||| |||||||||||||||||    
T  749 ggcttaatacatcatttggtcccttaacttattttt 714  T

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Target: scaffold1878 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Original strand, 525 - 560
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttattttt 333  Q
    |||||||||||||||||| |||||||||||||||||    
T  525 ggcttaatacatcatttggtcccttaacttattttt 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 20 - 66
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  20 ggcttaatacatgatttggtcccttaacttatttttgaatttcattt 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 207919 - 207873
Alignment:
Q  298 ggcttaatacatcatttgatcccttaacttatttttggttttcattt 344  Q
    |||||||||||||||||| |||||||| |||||||||  ||||||||    
T  207919 ggcttaatacatcatttggtcccttaatttatttttgactttcattt 207873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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