View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21284_high_76 (Length: 234)
Name: NF21284_high_76
Description: NF21284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21284_high_76 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 49041380 - 49041601
Alignment:
| Q |
1 |
aacctttcagcaacttccttctaaccaaagaaacaaaaaacatcaactgttcagaaaatggcaaaaccaatggacccaacgttgttatgtttgttttcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49041380 |
aacctttcagcaacttccttctaaccaaagaaacaaaaaacatcaactgttcagaaaatggcaaaaccaatggacccaacgttgttatgtttgttttcaa |
49041479 |
T |
|
| Q |
101 |
agcatctcctgcaacagccattaattctctagccaatgaaacaccaactttccctgtctcatcttctttctggtaaacacagttatagttcttgtcatca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49041480 |
agcatctcctgcaacagccattaattctctagccaatgaaacaccaactttccctgtctcatcttctttctggtaaacacagttatagttcttgtcatca |
49041579 |
T |
|
| Q |
201 |
gctcctttatgggttcgaactg |
222 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
49041580 |
gctcctttatgggttcgaactg |
49041601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University