View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21284_low_56 (Length: 308)
Name: NF21284_low_56
Description: NF21284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21284_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 293817 - 293564
Alignment:
| Q |
7 |
tgagatgaaatccatccttaaatatgagtgttacttttatgttttaaaagcaaagcatttatttataattcttgttcagcctcttgagacagcaaggccc |
106 |
Q |
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| T |
293817 |
tgagatgaaattcatccttaaatatgagtgttacttttatgttttaaaagcaaagcatttatttaaaattcttgttctgcctcttgagacagcaaggccc |
293718 |
T |
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| Q |
107 |
attattcttttttatttctttaagtttgcttcatctgacaaggtatgtattgtattgtatagtattcattaagttaagcatcagttgagttgaggatcat |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
293717 |
attattcttttttatttctttaagtttgcttcatctgacaaggtatgtatt-----gtatagtattcattaagttaagcatcagttgagttgaggatcat |
293623 |
T |
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| Q |
207 |
aaacataactagaaaagcaatacaattattcattctcatcatacacctttgtctttaca |
265 |
Q |
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|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
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| T |
293622 |
aaacataactagaaaagcaatacaattaattattctcatcatacacctttgtctttaca |
293564 |
T |
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